Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:09:50 (1670029): wrapper (7.7.26015): starting
10:09:50 (1670029): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 10:09:50] Arguments: --nthreads 12
[2025-07-27 10:09:50] Threads: 12
[2025-07-27 10:09:50] Checking for CVMFS
[2025-07-27 10:09:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 10:09:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 10:09:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 10:09:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 10:09:51] 2.12.6.0 1267368 18463 327812 148814 0 64 20598987 32935937 8384 16776704 0 34202199 99.699 64487287 29461 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 10:09:51] CVMFS is ok
[2025-07-27 10:09:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 10:09:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 10:09:51] Further information can be found at the LHC@home message board.
[2025-07-27 10:09:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 10:09:51] Checking for apptainer binary...
[2025-07-27 10:09:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 10:09:51] Running /usr/bin/apptainer --version
[2025-07-27 10:09:51] apptainer version 1.4.1-1.el9
[2025-07-27 10:09:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 10:09:51] c6-2-29-3.aglt2.org
[2025-07-27 10:09:51] apptainer works
[2025-07-27 10:09:51] Set ATHENA_PROC_NUMBER=12
[2025-07-27 10:09:51] Set ATHENA_CORE_NUMBER=12
[2025-07-27 10:09:51] Starting ATLAS job with PandaID=6746380922
[2025-07-27 10:09:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 11:33:43]  *** The last 200 lines of the pilot log: ***
[2025-07-27 11:33:43]  is_altstaged=None
[2025-07-27 11:33:43]  is_tar=False
[2025-07-27 11:33:43]  lfn=log.45743349._046139.job.log.tgz.1
[2025-07-27 11:33:43]  mtime=0
[2025-07-27 11:33:43]  protocol_id=None
[2025-07-27 11:33:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 11:33:43]  replicas=None
[2025-07-27 11:33:43]  scope=mc23_13p6TeV
[2025-07-27 11:33:43]  status=None
[2025-07-27 11:33:43]  status_code=0
[2025-07-27 11:33:43]  storage_token=
[2025-07-27 11:33:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6746380922/log.45743349._046139.job.log.tgz.1
[2025-07-27 11:33:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/a1/log.45743349._046139.job.log.tgz.1
[2025-07-27 11:33:43]  workdir=None
[2025-07-27 11:33:43] ]
[2025-07-27 11:33:43] 2025-07-27 15:33:04,519 | INFO     | transferring file log.45743349._046139.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6746380922/log.45743349._046139.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 11:33:43] 2025-07-27 15:33:04,519 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6746380922/log.45743349._046139.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._046139.job
[2025-07-27 11:33:43] 2025-07-27 15:33:04,541 | INFO     | adding to output.list: log.45743349._046139.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/a1/log.45743349._046139.job.log.tg
[2025-07-27 11:33:43] 2025-07-27 15:33:04,542 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 11:33:43] 2025-07-27 15:33:04,542 | INFO     | summary of transferred files:
[2025-07-27 11:33:43] 2025-07-27 15:33:04,542 | INFO     |  -- lfn=log.45743349._046139.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 11:33:43] 2025-07-27 15:33:04,542 | INFO     | stage-out finished correctly
[2025-07-27 11:33:43] 2025-07-27 15:33:05,488 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 11:33:43] 2025-07-27 15:33:05,602 | INFO     | job 6746380922 has state=finished
[2025-07-27 11:33:43] 2025-07-27 15:33:05,602 | INFO     | preparing for final server update for job 6746380922 in state='finished'
[2025-07-27 11:33:43] 2025-07-27 15:33:05,603 | INFO     | this job has now completed (state=finished)
[2025-07-27 11:33:43] 2025-07-27 15:33:05,603 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 11:33:43] 2025-07-27 15:33:05,604 | INFO     | log transfer has been attempted: DONE
[2025-07-27 11:33:43] 2025-07-27 15:33:05,604 | INFO     | job 6746380922 has finished - writing final server update
[2025-07-27 11:33:43] 2025-07-27 15:33:05,604 | INFO     | total number of processed events: 400 (read)
[2025-07-27 11:33:43] 2025-07-27 15:33:05,605 | INFO     | executing command: lscpu
[2025-07-27 11:33:43] 2025-07-27 15:33:05,666 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 11:33:43] 2025-07-27 15:33:09,408 | WARNING  | process 1682636 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 11:33:43] 2025-07-27 15:33:09,408 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746380922/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 11:33:43] 2025-07-27 15:33:09,658 | INFO     | number of running child processes to parent process 1682636: 1
[2025-07-27 11:33:43] 2025-07-27 15:33:09,659 | INFO     | maximum number of monitored processes: 6
[2025-07-27 11:33:43] 2025-07-27 15:33:11,003 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 11:33:43] 2025-07-27 15:33:11,007 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2626.266160714285
[2025-07-27 11:33:43] 2025-07-27 15:33:11,015 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746380922/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 11:33:43] 2025-07-27 15:33:11,016 | INFO     | extracted standard info from prmon json
[2025-07-27 11:33:43] 2025-07-27 15:33:11,016 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 11:33:43] 2025-07-27 15:33:11,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 11:33:43] 2025-07-27 15:33:11,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 11:33:43] 2025-07-27 15:33:11,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 11:33:43] 2025-07-27 15:33:11,018 | INFO     | fitting pss+swap vs Time
[2025-07-27 11:33:43] 2025-07-27 15:33:11,019 | INFO     | sum of square deviations: 130812065.52000009
[2025-07-27 11:33:43] 2025-07-27 15:33:11,019 | INFO     | sum of deviations: 1663634750.2399998
[2025-07-27 11:33:43] 2025-07-27 15:33:11,019 | INFO     | mean x: 1753627997.08
[2025-07-27 11:33:43] 2025-07-27 15:33:11,019 | INFO     | mean y: 2435136.6266666665
[2025-07-27 11:33:43] 2025-07-27 15:33:11,020 | INFO     | -- intersect: -22299762014.216507
[2025-07-27 11:33:43] 2025-07-27 15:33:11,020 | INFO     | intersect: -22299762014.216507
[2025-07-27 11:33:43] 2025-07-27 15:33:11,020 | INFO     | chi2: 0.12041601863068481
[2025-07-27 11:33:43] 2025-07-27 15:33:11,020 | INFO     | -- intersect: -22299762014.216507
[2025-07-27 11:33:43] 2025-07-27 15:33:11,020 | INFO     | current memory leak: 12.72 B/s (using 75 data points, chi2=0.12)
[2025-07-27 11:33:43] 2025-07-27 15:33:11,020 | INFO     | could have reported an average CPU frequency of 2610 MHz (6 samples)
[2025-07-27 11:33:43] 2025-07-27 15:33:11,021 | INFO     | ..............................
[2025-07-27 11:33:43] 2025-07-27 15:33:11,021 | INFO     | . Timing measurements:
[2025-07-27 11:33:43] 2025-07-27 15:33:11,021 | INFO     | . get job = 0 s
[2025-07-27 11:33:43] 2025-07-27 15:33:11,021 | INFO     | . initial setup = 2 s
[2025-07-27 11:33:43] 2025-07-27 15:33:11,021 | INFO     | . payload setup = 8 s
[2025-07-27 11:33:43] 2025-07-27 15:33:11,021 | INFO     | . stage-in = 0 s
[2025-07-27 11:33:43] 2025-07-27 15:33:11,021 | INFO     | . payload execution = 4950 s
[2025-07-27 11:33:43] 2025-07-27 15:33:11,021 | INFO     | . stage-out = 0 s
[2025-07-27 11:33:43] 2025-07-27 15:33:11,021 | INFO     | . log creation = 0 s
[2025-07-27 11:33:43] 2025-07-27 15:33:11,021 | INFO     | ..............................
[2025-07-27 11:33:43] 2025-07-27 15:33:11,104 | INFO     | 
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | job summary report
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | --------------------------------------------------
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | PanDA job id: 6746380922
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | task id: 45743349
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | errors: (none)
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | pilot state: finished 
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | transexitcode: 0
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | exeerrorcode: 0
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | exeerrordiag: 
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | exitcode: 0
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | exitmsg: OK
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | cpuconsumptiontime: 51154 s
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | nevents: 400
[2025-07-27 11:33:43] 2025-07-27 15:33:11,105 | INFO     | neventsw: 0
[2025-07-27 11:33:43] 2025-07-27 15:33:11,106 | INFO     | pid: 1682636
[2025-07-27 11:33:43] 2025-07-27 15:33:11,106 | INFO     | pgrp: 1682636
[2025-07-27 11:33:43] 2025-07-27 15:33:11,106 | INFO     | corecount: 12
[2025-07-27 11:33:43] 2025-07-27 15:33:11,106 | INFO     | event service: False
[2025-07-27 11:33:43] 2025-07-27 15:33:11,106 | INFO     | sizes: {0: 2397423, 5: 2397685, 11: 2397741, 4963: 2423903, 4964: 2432901, 4965: 2432957, 4970: 2433279}
[2025-07-27 11:33:43] 2025-07-27 15:33:11,106 | INFO     | --------------------------------------------------
[2025-07-27 11:33:43] 2025-07-27 15:33:11,106 | INFO     | 
[2025-07-27 11:33:43] 2025-07-27 15:33:11,106 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 11:33:43] 2025-07-27 15:33:11,126 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,127 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,127 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,127 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,127 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,127 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,127 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,127 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,127 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,127 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,127 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,127 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,128 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,128 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,128 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 11:33:43] 2025-07-27 15:33:11,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,128 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 11:33:43] 2025-07-27 15:33:11,128 | INFO     | job 6746380922 has completed (purged errors)
[2025-07-27 11:33:43] 2025-07-27 15:33:11,128 | INFO     | overall cleanup function is called
[2025-07-27 11:33:43] 2025-07-27 15:33:12,135 | INFO     | --- collectZombieJob: --- 10, [1682636]
[2025-07-27 11:33:43] 2025-07-27 15:33:12,135 | INFO     | zombie collector waiting for pid 1682636
[2025-07-27 11:33:43] 2025-07-27 15:33:12,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 11:33:43] 2025-07-27 15:33:12,135 | INFO     | collected zombie processes
[2025-07-27 11:33:43] 2025-07-27 15:33:12,135 | INFO     | will attempt to kill all subprocesses of pid=1682636
[2025-07-27 11:33:43] 2025-07-27 15:33:12,381 | INFO     | process IDs to be killed: [1682636] (in reverse order)
[2025-07-27 11:33:43] 2025-07-27 15:33:12,472 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 11:33:43] 2025-07-27 15:33:12,472 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 11:33:43] 2025-07-27 15:33:12,482 | INFO     | did not find any defunct processes belonging to 1682636
[2025-07-27 11:33:43] 2025-07-27 15:33:12,493 | INFO     | did not find any defunct processes belonging to 1682636
[2025-07-27 11:33:43] 2025-07-27 15:33:12,494 | INFO     | ready for new job
[2025-07-27 11:33:43] 2025-07-27 15:33:12,494 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 11:33:43] 2025-07-27 15:33:12,495 | INFO     | ***************************************
[2025-07-27 11:33:43] 2025-07-27 15:33:12,495 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 11:33:43] 2025-07-27 15:33:12,495 | INFO     | ***************************************
[2025-07-27 11:33:43] 2025-07-27 15:33:12,495 | INFO     | 
[2025-07-27 11:33:43] 2025-07-27 15:33:12,511 | INFO     | architecture information:
[2025-07-27 11:33:43] 2025-07-27 15:33:12,511 | INFO     | executing command: cat /etc/os-release
[2025-07-27 11:33:43] 2025-07-27 15:33:12,528 | INFO     | cat /etc/os-release:
[2025-07-27 11:33:43] NAME="CentOS Linux"
[2025-07-27 11:33:43] VERSION="7 (Core)"
[2025-07-27 11:33:43] ID="centos"
[2025-07-27 11:33:43] ID_LIKE="rhel fedora"
[2025-07-27 11:33:43] VERSION_ID="7"
[2025-07-27 11:33:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 11:33:43] ANSI_COLOR="0;31"
[2025-07-27 11:33:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 11:33:43] HOME_URL="https://www.centos.org/"
[2025-07-27 11:33:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 11:33:43] 
[2025-07-27 11:33:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 11:33:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 11:33:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 11:33:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 11:33:43] 
[2025-07-27 11:33:43] 2025-07-27 15:33:12,529 | INFO     | ***************************************
[2025-07-27 11:33:43] 2025-07-27 15:33:13,032 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 11:33:43] 2025-07-27 15:33:13,054 | INFO     | sufficient remaining disk space (76538707968 B)
[2025-07-27 11:33:43] 2025-07-27 15:33:13,055 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 11:33:43] 2025-07-27 15:33:13,055 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 11:33:43] 2025-07-27 15:33:13,055 | INFO     | update_server=False
[2025-07-27 11:33:43] 2025-07-27 15:33:13,055 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 11:33:43] 2025-07-27 15:33:13,056 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 11:33:43] 2025-07-27 15:33:13,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 11:33:43] 2025-07-27 15:33:13,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 11:33:43] 2025-07-27 15:33:13,167 | INFO     | aborting loop
[2025-07-27 11:33:43] 2025-07-27 15:33:13,245 | INFO     | all job control threads have been joined
[2025-07-27 11:33:43] 2025-07-27 15:33:13,368 | INFO     | all payload control threads have been joined
[2025-07-27 11:33:43] 2025-07-27 15:33:14,060 | INFO     | [job] retrieve thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:14,060 | INFO     | [job] queue monitor thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:14,082 | INFO     | all data control threads have been joined
[2025-07-27 11:33:43] 2025-07-27 15:33:14,172 | INFO     | [job] job monitor thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:14,222 | INFO     | [payload] validate_post thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:14,250 | INFO     | [job] control thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:14,283 | INFO     | [payload] failed_post thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:14,297 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:14,298 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:14,373 | INFO     | [payload] control thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:15,013 | INFO     | [data] copytool_in thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:15,046 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:15,061 | INFO     | [data] copytool_out thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:15,087 | INFO     | [data] control thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:15,297 | INFO     | [job] validate thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:16,111 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 11:33:43] 2025-07-27 15:33:20,117 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:23,242 | INFO     | job.realtimelogging is not enabled
[2025-07-27 11:33:43] 2025-07-27 15:33:24,248 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 11:33:43] 2025-07-27 15:33:24,579 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140709482248000)>', '<ExcThread(monitor, started 140708832868096)>']
[2025-07-27 11:33:43] 2025-07-27 15:33:29,604 | INFO     | all workflow threads have been joined
[2025-07-27 11:33:43] 2025-07-27 15:33:29,604 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 11:33:43] 2025-07-27 15:33:29,605 | INFO     | traces error code: 0
[2025-07-27 11:33:43] 2025-07-27 15:33:29,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 11:33:43] 2025-07-27 15:33:43,246 | INFO     | PID=1673770 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 11:33:43] 2025-07-27 15:33:43,247 | INFO     | .. there are 10 such processes running
[2025-07-27 11:33:43] 2025-07-27 15:33:43,247 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 11:33:43] 2025-07-27 15:33:43,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 11:33:43] 2025-07-27 15:33:43,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 11:33:43] 2025-07-27 15:33:43,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 11:33:43] 2025-07-27 15:33:43,248 | INFO     | [monitor] control thread has ended
[2025-07-27 11:33:43] 2025-07-27 15:33:43,439 [wrapper] ==== pilot stdout END ====
[2025-07-27 11:33:43] 2025-07-27 15:33:43,443 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 11:33:43] 2025-07-27 15:33:43,447 [wrapper] pilotpid: 1673770
[2025-07-27 11:33:43] 2025-07-27 15:33:43,449 [wrapper] Pilot exit status: 0
[2025-07-27 11:33:43] 2025-07-27 15:33:43,465 [wrapper] pandaids: 6746380922
[2025-07-27 11:33:43] 2025-07-27 15:33:43,532 [wrapper] cleanup supervisor_pilot 1939712 1673771
[2025-07-27 11:33:43] 2025-07-27 15:33:43,537 [wrapper] Test setup, not cleaning
[2025-07-27 11:33:43] 2025-07-27 15:33:43,541 [wrapper] apfmon messages muted
[2025-07-27 11:33:43] 2025-07-27 15:33:43,544 [wrapper] ==== wrapper stdout END ====
[2025-07-27 11:33:43] 2025-07-27 15:33:43,548 [wrapper] ==== wrapper stderr END ====
[2025-07-27 11:33:43]  *** Error codes and diagnostics ***
[2025-07-27 11:33:43]     "exeErrorCode": 0,
[2025-07-27 11:33:43]     "exeErrorDiag": "",
[2025-07-27 11:33:43]     "pilotErrorCode": 0,
[2025-07-27 11:33:43]     "pilotErrorDiag": "",
[2025-07-27 11:33:43]  *** Listing of results directory ***
[2025-07-27 11:33:43] total 353504
[2025-07-27 11:33:43] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 03:08 pilot3.tar.gz
[2025-07-27 11:33:43] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 03:12 queuedata.json
[2025-07-27 11:33:43] -rwx------. 1 boincer umatlas     36292 Jul 27 03:13 runpilot2-wrapper.sh
[2025-07-27 11:33:43] -rw-r--r--. 1 boincer umatlas       100 Jul 27 10:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 11:33:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 10:09 run_atlas
[2025-07-27 11:33:43] -rw-r--r--. 1 boincer umatlas       105 Jul 27 10:09 job.xml
[2025-07-27 11:33:43] -rw-r--r--. 2 boincer umatlas 142257089 Jul 27 10:09 EVNT.45743347._001055.pool.root.1
[2025-07-27 11:33:43] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 10:09 input.tar.gz
[2025-07-27 11:33:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 10:09 start_atlas.sh
[2025-07-27 11:33:43] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 10:09 shared
[2025-07-27 11:33:43] -rw-r--r--. 1 boincer umatlas         0 Jul 27 10:09 boinc_lockfile
[2025-07-27 11:33:43] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 10:09 pandaJob.out
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas    980117 Jul 27 10:10 agis_schedconf.cvmfs.json
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas   1593052 Jul 27 10:10 agis_ddmendpoints.agis.ALL.json
[2025-07-27 11:33:43] drwx------. 4 boincer umatlas      4096 Jul 27 10:10 pilot3
[2025-07-27 11:33:43] -rw-r--r--. 1 boincer umatlas      6842 Jul 27 11:28 init_data.xml
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas 214157819 Jul 27 11:32 HITS.45743349._046139.pool.root.1
[2025-07-27 11:33:43] -rw-r--r--. 1 boincer umatlas       530 Jul 27 11:32 boinc_task_state.xml
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas      1035 Jul 27 11:33 memory_monitor_summary.json
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas    367900 Jul 27 11:33 log.45743349._046139.job.log.tgz.1
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas      7817 Jul 27 11:33 heartbeat.json
[2025-07-27 11:33:43] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 11:33 boinc_mmap_file
[2025-07-27 11:33:43] -rw-r--r--. 1 boincer umatlas        27 Jul 27 11:33 wrapper_checkpoint.txt
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas        95 Jul 27 11:33 pilot_heartbeat.json
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas       823 Jul 27 11:33 pilotlog.txt
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas    483191 Jul 27 11:33 log.45743349._046139.job.log.1
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas       357 Jul 27 11:33 output.list
[2025-07-27 11:33:43] -rw-r--r--. 1 boincer umatlas       620 Jul 27 11:33 runtime_log
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas    870400 Jul 27 11:33 result.tar.gz
[2025-07-27 11:33:43] -rw-r--r--. 1 boincer umatlas      8667 Jul 27 11:33 runtime_log.err
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas       655 Jul 27 11:33 01EODmAlA07n9Rq4apOajLDm4fhM0noT9bVof3QYDmI91KDmK8HR1n.diag
[2025-07-27 11:33:43] -rw-r--r--. 1 boincer umatlas     21503 Jul 27 11:33 stderr.txt
[2025-07-27 11:33:43] HITS file was successfully produced:
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas 214157819 Jul 27 11:32 shared/HITS.pool.root.1
[2025-07-27 11:33:43]  *** Contents of shared directory: ***
[2025-07-27 11:33:43] total 349468
[2025-07-27 11:33:43] -rw-r--r--. 2 boincer umatlas 142257089 Jul 27 10:09 ATLAS.root_0
[2025-07-27 11:33:43] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 10:09 input.tar.gz
[2025-07-27 11:33:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 10:09 start_atlas.sh
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas 214157819 Jul 27 11:32 HITS.pool.root.1
[2025-07-27 11:33:43] -rw-------. 1 boincer umatlas    870400 Jul 27 11:33 result.tar.gz
11:33:45 (1670029): run_atlas exited; CPU time 51230.017547
11:33:45 (1670029): called boinc_finish(0)

</stderr_txt>
]]>

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