Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:05:02 (2366815): wrapper (7.7.26015): starting
08:05:02 (2366815): wrapper: running run_atlas (--nthreads 12)
[2025-07-30 08:05:02] Arguments: --nthreads 12
[2025-07-30 08:05:02] Threads: 12
[2025-07-30 08:05:02] Checking for CVMFS
[2025-07-30 08:05:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-30 08:05:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-30 08:05:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-30 08:05:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-30 08:05:06] 2.13.1.0 2237 7397 63348 148915 0 188 2483436 4096001 912 130560 0 5984232 99.991 257342 225 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-30 08:05:06] CVMFS is ok
[2025-07-30 08:05:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-30 08:05:06] Checking for apptainer binary...
[2025-07-30 08:05:06] apptainer is not installed, using version from CVMFS
[2025-07-30 08:05:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-30 08:05:07] g3250
[2025-07-30 08:05:07] apptainer works
[2025-07-30 08:05:07] Set ATHENA_PROC_NUMBER=12
[2025-07-30 08:05:07] Set ATHENA_CORE_NUMBER=12
[2025-07-30 08:05:07] Starting ATLAS job with PandaID=6746329832
[2025-07-30 08:05:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-30 12:16:02]  *** The last 200 lines of the pilot log: ***
[2025-07-30 12:16:02] 2025-07-30 12:15:28,455 | INFO     | extracted standard memory fields from prmon json
[2025-07-30 12:16:02] 2025-07-30 12:15:28,455 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-30 12:16:02] 2025-07-30 12:15:28,459 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-30 12:16:02] 2025-07-30 12:15:28,459 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-30 12:16:02] 2025-07-30 12:15:28,467 | INFO     | fitting pss+swap vs Time
[2025-07-30 12:16:02] 2025-07-30 12:15:28,467 | INFO     | sum of square deviations: 4394577280.5
[2025-07-30 12:16:02] 2025-07-30 12:15:28,469 | INFO     | sum of deviations: 70878465751.5
[2025-07-30 12:16:02] 2025-07-30 12:15:28,469 | INFO     | mean x: 1753870325.5
[2025-07-30 12:16:02] 2025-07-30 12:15:28,469 | INFO     | mean y: 2657018.128099174
[2025-07-30 12:16:02] 2025-07-30 12:15:28,469 | INFO     | -- intersect: -28284850485.75181
[2025-07-30 12:16:02] 2025-07-30 12:15:28,469 | INFO     | intersect: -28284850485.75181
[2025-07-30 12:16:02] 2025-07-30 12:15:28,470 | INFO     | chi2: 4.222965824506656
[2025-07-30 12:16:02] 2025-07-30 12:15:28,470 | INFO     | sum of square deviations: 4127772278.0
[2025-07-30 12:16:02] 2025-07-30 12:15:28,476 | INFO     | sum of deviations: 85995831530.00005
[2025-07-30 12:16:02] 2025-07-30 12:15:28,476 | INFO     | mean x: 1753870173.0
[2025-07-30 12:16:02] 2025-07-30 12:15:28,476 | INFO     | mean y: 2665500.4978902955
[2025-07-30 12:16:02] 2025-07-30 12:15:28,476 | INFO     | -- intersect: -36536541065.39301
[2025-07-30 12:16:02] 2025-07-30 12:15:28,476 | INFO     | intersect: -36536541065.39301
[2025-07-30 12:16:02] 2025-07-30 12:15:28,476 | INFO     | chi2: 3.5357213320704686
[2025-07-30 12:16:02] 2025-07-30 12:15:28,477 | INFO     | current chi2=3.5357213320704686 (change=16.273977128774757 %)
[2025-07-30 12:16:02] 2025-07-30 12:15:28,477 | INFO     | right removable region: 236
[2025-07-30 12:16:02] 2025-07-30 12:15:28,477 | INFO     | sum of square deviations: 4127772278.0
[2025-07-30 12:16:02] 2025-07-30 12:15:28,479 | INFO     | sum of deviations: -1610884339.9999905
[2025-07-30 12:16:02] 2025-07-30 12:15:28,483 | INFO     | mean x: 1753870478.0
[2025-07-30 12:16:02] 2025-07-30 12:15:28,483 | INFO     | mean y: 2698348.5780590717
[2025-07-30 12:16:02] 2025-07-30 12:15:28,483 | INFO     | -- intersect: 687155314.0110968
[2025-07-30 12:16:02] 2025-07-30 12:15:28,483 | INFO     | intersect: 687155314.0110968
[2025-07-30 12:16:02] 2025-07-30 12:15:28,484 | INFO     | chi2: 1.202277559777659
[2025-07-30 12:16:02] 2025-07-30 12:15:28,484 | INFO     | current chi2=1.202277559777659 (change=71.53001919171075 %)
[2025-07-30 12:16:02] 2025-07-30 12:15:28,484 | INFO     | sum of square deviations: 3871990738.0
[2025-07-30 12:16:02] 2025-07-30 12:15:28,486 | INFO     | sum of deviations: -24871569833.0
[2025-07-30 12:16:02] 2025-07-30 12:15:28,486 | INFO     | mean x: 1753870630.5
[2025-07-30 12:16:02] 2025-07-30 12:15:28,486 | INFO     | mean y: 2712190.0689655175
[2025-07-30 12:16:02] 2025-07-30 12:15:28,486 | INFO     | -- intersect: 11268626500.354822
[2025-07-30 12:16:02] 2025-07-30 12:15:28,486 | INFO     | intersect: 11268626500.354822
[2025-07-30 12:16:02] 2025-07-30 12:15:28,486 | INFO     | chi2: 0.8890590981514077
[2025-07-30 12:16:02] 2025-07-30 12:15:28,486 | INFO     | current chi2=0.8890590981514077 (change=26.05209247057524 %)
[2025-07-30 12:16:02] 2025-07-30 12:15:28,487 | INFO     | sum of square deviations: 3627000098.0
[2025-07-30 12:16:02] 2025-07-30 12:15:28,492 | INFO     | sum of deviations: -37430897225.99999
[2025-07-30 12:16:02] 2025-07-30 12:15:28,492 | INFO     | mean x: 1753870783.0
[2025-07-30 12:16:02] 2025-07-30 12:15:28,493 | INFO     | mean y: 2719975.2378854626
[2025-07-30 12:16:02] 2025-07-30 12:15:28,493 | INFO     | -- intersect: 18102790350.851402
[2025-07-30 12:16:02] 2025-07-30 12:15:28,493 | INFO     | intersect: 18102790350.851402
[2025-07-30 12:16:02] 2025-07-30 12:15:28,493 | INFO     | chi2: 0.7635168987955845
[2025-07-30 12:16:02] 2025-07-30 12:15:28,493 | INFO     | current chi2=0.7635168987955845 (change=14.120793501451043 %)
[2025-07-30 12:16:02] 2025-07-30 12:15:28,493 | INFO     | left removable region: 30
[2025-07-30 12:16:02] 2025-07-30 12:15:28,494 | INFO     | sum of square deviations: 2710627567.5
[2025-07-30 12:16:02] 2025-07-30 12:15:28,499 | INFO     | sum of deviations: -16449389594.499998
[2025-07-30 12:16:02] 2025-07-30 12:15:28,499 | INFO     | mean x: 1753871057.5
[2025-07-30 12:16:02] 2025-07-30 12:15:28,499 | INFO     | mean y: 2727217.2378640776
[2025-07-30 12:16:02] 2025-07-30 12:15:28,499 | INFO     | -- intersect: 10646058919.91937
[2025-07-30 12:16:02] 2025-07-30 12:15:28,499 | INFO     | intersect: 10646058919.91937
[2025-07-30 12:16:02] 2025-07-30 12:15:28,500 | INFO     | chi2: 0.04307286307129982
[2025-07-30 12:16:02] 2025-07-30 12:15:28,500 | INFO     | -- intersect: 10646058919.91937
[2025-07-30 12:16:02] 2025-07-30 12:15:28,500 | INFO     | current memory leak: -6.07 B/s (using 206 data points, chi2=0.04)
[2025-07-30 12:16:02] 2025-07-30 12:15:28,500 | INFO     | could have reported an average CPU frequency of 3267 MHz (12 samples)
[2025-07-30 12:16:02] 2025-07-30 12:15:28,500 | INFO     | ..............................
[2025-07-30 12:16:02] 2025-07-30 12:15:28,501 | INFO     | . Timing measurements:
[2025-07-30 12:16:02] 2025-07-30 12:15:28,501 | INFO     | . get job = 0 s
[2025-07-30 12:16:02] 2025-07-30 12:15:28,501 | INFO     | . initial setup = 4 s
[2025-07-30 12:16:02] 2025-07-30 12:15:28,501 | INFO     | . payload setup = 66 s
[2025-07-30 12:16:02] 2025-07-30 12:15:28,501 | INFO     | . stage-in = 0 s
[2025-07-30 12:16:02] 2025-07-30 12:15:28,501 | INFO     | . payload execution = 14741 s
[2025-07-30 12:16:02] 2025-07-30 12:15:28,501 | INFO     | . stage-out = 1 s
[2025-07-30 12:16:02] 2025-07-30 12:15:28,501 | INFO     | . log creation = 0 s
[2025-07-30 12:16:02] 2025-07-30 12:15:28,501 | INFO     | ..............................
[2025-07-30 12:16:02] 2025-07-30 12:15:28,863 | INFO     | 
[2025-07-30 12:16:02] 2025-07-30 12:15:28,863 | INFO     | job summary report
[2025-07-30 12:16:02] 2025-07-30 12:15:28,864 | INFO     | --------------------------------------------------
[2025-07-30 12:16:02] 2025-07-30 12:15:28,864 | INFO     | PanDA job id: 6746329832
[2025-07-30 12:16:02] 2025-07-30 12:15:28,864 | INFO     | task id: 45758416
[2025-07-30 12:16:02] 2025-07-30 12:15:28,864 | INFO     | errors: (none)
[2025-07-30 12:16:02] 2025-07-30 12:15:28,864 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-30 12:16:02] 2025-07-30 12:15:28,864 | INFO     | pilot state: finished 
[2025-07-30 12:16:02] 2025-07-30 12:15:28,865 | INFO     | transexitcode: 0
[2025-07-30 12:16:02] 2025-07-30 12:15:28,865 | INFO     | exeerrorcode: 0
[2025-07-30 12:16:02] 2025-07-30 12:15:28,865 | INFO     | exeerrordiag: 
[2025-07-30 12:16:02] 2025-07-30 12:15:28,865 | INFO     | exitcode: 0
[2025-07-30 12:16:02] 2025-07-30 12:15:28,865 | INFO     | exitmsg: OK
[2025-07-30 12:16:02] 2025-07-30 12:15:28,865 | INFO     | cpuconsumptiontime: 59087 s
[2025-07-30 12:16:02] 2025-07-30 12:15:28,865 | INFO     | nevents: 400
[2025-07-30 12:16:02] 2025-07-30 12:15:28,865 | INFO     | neventsw: 0
[2025-07-30 12:16:02] 2025-07-30 12:15:28,865 | INFO     | pid: 2376911
[2025-07-30 12:16:02] 2025-07-30 12:15:28,865 | INFO     | pgrp: 2376911
[2025-07-30 12:16:02] 2025-07-30 12:15:28,865 | INFO     | corecount: 12
[2025-07-30 12:16:02] 2025-07-30 12:15:28,866 | INFO     | event service: False
[2025-07-30 12:16:02] 2025-07-30 12:15:28,866 | INFO     | sizes: {0: 2391075, 1: 2391954, 2: 2391982, 13: 2391982, 23: 2392038, 34: 2392066, 42: 2392484, 45: 2392540, 14810: 2423471, 14811: 2423470, 14813: 2432598, 14815:
[2025-07-30 12:16:02] 2025-07-30 12:15:28,866 | INFO     | --------------------------------------------------
[2025-07-30 12:16:02] 2025-07-30 12:15:28,866 | INFO     | 
[2025-07-30 12:16:02] 2025-07-30 12:15:28,866 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-30 12:16:02] 2025-07-30 12:15:29,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,036 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,037 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-30 12:16:02] 2025-07-30 12:15:29,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,037 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-30 12:16:02] 2025-07-30 12:15:29,037 | INFO     | job 6746329832 has completed (purged errors)
[2025-07-30 12:16:02] 2025-07-30 12:15:29,037 | INFO     | overall cleanup function is called
[2025-07-30 12:16:02] 2025-07-30 12:15:30,047 | INFO     | --- collectZombieJob: --- 10, [2376911]
[2025-07-30 12:16:02] 2025-07-30 12:15:30,047 | INFO     | zombie collector waiting for pid 2376911
[2025-07-30 12:16:02] 2025-07-30 12:15:30,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-30 12:16:02] 2025-07-30 12:15:30,047 | INFO     | collected zombie processes
[2025-07-30 12:16:02] 2025-07-30 12:15:30,047 | INFO     | will attempt to kill all subprocesses of pid=2376911
[2025-07-30 12:16:02] 2025-07-30 12:15:30,204 | INFO     | process IDs to be killed: [2376911] (in reverse order)
[2025-07-30 12:16:02] 2025-07-30 12:15:30,267 | WARNING  | found no corresponding commands to process id(s)
[2025-07-30 12:16:02] 2025-07-30 12:15:30,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-30 12:16:02] 2025-07-30 12:15:30,269 | INFO     | did not find any defunct processes belonging to 2376911
[2025-07-30 12:16:02] 2025-07-30 12:15:30,275 | INFO     | did not find any defunct processes belonging to 2376911
[2025-07-30 12:16:02] 2025-07-30 12:15:30,275 | INFO     | ready for new job
[2025-07-30 12:16:02] 2025-07-30 12:15:30,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-30 12:16:02] 2025-07-30 12:15:30,277 | INFO     | ***************************************
[2025-07-30 12:16:02] 2025-07-30 12:15:30,277 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-30 12:16:02] 2025-07-30 12:15:30,277 | INFO     | ***************************************
[2025-07-30 12:16:02] 2025-07-30 12:15:30,277 | INFO     | 
[2025-07-30 12:16:02] 2025-07-30 12:15:30,295 | INFO     | architecture information:
[2025-07-30 12:16:02] 2025-07-30 12:15:30,299 | INFO     | executing command: cat /etc/os-release
[2025-07-30 12:16:02] 2025-07-30 12:15:30,360 | INFO     | cat /etc/os-release:
[2025-07-30 12:16:02] NAME="CentOS Linux"
[2025-07-30 12:16:02] VERSION="7 (Core)"
[2025-07-30 12:16:02] ID="centos"
[2025-07-30 12:16:02] ID_LIKE="rhel fedora"
[2025-07-30 12:16:02] VERSION_ID="7"
[2025-07-30 12:16:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-30 12:16:02] ANSI_COLOR="0;31"
[2025-07-30 12:16:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-30 12:16:02] HOME_URL="https://www.centos.org/"
[2025-07-30 12:16:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-30 12:16:02] 
[2025-07-30 12:16:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-30 12:16:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-30 12:16:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-30 12:16:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-30 12:16:02] 
[2025-07-30 12:16:02] 2025-07-30 12:15:30,360 | INFO     | ***************************************
[2025-07-30 12:16:02] 2025-07-30 12:15:30,863 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-30 12:16:02] 2025-07-30 12:15:30,935 | INFO     | sufficient remaining disk space (31245467648 B)
[2025-07-30 12:16:02] 2025-07-30 12:15:30,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-30 12:16:02] 2025-07-30 12:15:30,936 | INFO     | current server update state: UPDATING_FINAL
[2025-07-30 12:16:02] 2025-07-30 12:15:30,936 | INFO     | update_server=False
[2025-07-30 12:16:02] 2025-07-30 12:15:30,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-30 12:16:02] 2025-07-30 12:15:30,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-30 12:16:02] 2025-07-30 12:15:31,439 | INFO     | all payload control threads have been joined
[2025-07-30 12:16:02] 2025-07-30 12:15:31,507 | INFO     | all data control threads have been joined
[2025-07-30 12:16:02] 2025-07-30 12:15:31,835 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-30 12:16:02] 2025-07-30 12:15:31,835 | INFO     | aborting loop
[2025-07-30 12:16:02] 2025-07-30 12:15:31,939 | INFO     | all job control threads have been joined
[2025-07-30 12:16:02] 2025-07-30 12:15:31,943 | INFO     | [job] retrieve thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:32,095 | INFO     | [payload] failed_post thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:32,135 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-30 12:16:02] 2025-07-30 12:15:32,223 | INFO     | [payload] validate_pre thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:32,299 | INFO     | [job] create_data_payload thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:32,443 | INFO     | [payload] control thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:32,515 | INFO     | [data] control thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:32,843 | INFO     | [job] job monitor thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:32,859 | INFO     | [payload] execute_payloads thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:32,943 | INFO     | [job] control thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:32,951 | INFO     | [data] copytool_out thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:32,999 | INFO     | [job] validate thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:33,015 | INFO     | [data] copytool_in thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:33,135 | INFO     | [payload] validate_post thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:33,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:33,727 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-30 12:16:02] 2025-07-30 12:15:34,731 | INFO     | [job] queue monitor thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:36,151 | INFO     | [data] queue_monitor thread has finished
[2025-07-30 12:16:02] 2025-07-30 12:15:36,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139965397489472)>', '<ExcThread(monitor, started 139964947863296)>']
[2025-07-30 12:16:02] 2025-07-30 12:15:41,875 | INFO     | all workflow threads have been joined
[2025-07-30 12:16:02] 2025-07-30 12:15:41,875 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-30 12:16:02] 2025-07-30 12:15:41,875 | INFO     | traces error code: 0
[2025-07-30 12:16:02] 2025-07-30 12:15:41,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-30 12:16:02] 2025-07-30 12:16:01,311 | INFO     | PID=2370445 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-30 12:16:02] 2025-07-30 12:16:01,311 | INFO     | .. there are 2 such processes running
[2025-07-30 12:16:02] 2025-07-30 12:16:01,312 | INFO     | found 0 job(s) in 20 queues
[2025-07-30 12:16:02] 2025-07-30 12:16:01,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-30 12:16:02] 2025-07-30 12:16:01,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-30 12:16:02] 2025-07-30 12:16:01,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-30 12:16:02] 2025-07-30 12:16:01,312 | INFO     | [monitor] control thread has ended
[2025-07-30 12:16:02] 2025-07-30 12:16:01,572 [wrapper] ==== pilot stdout END ====
[2025-07-30 12:16:02] 2025-07-30 12:16:01,600 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-30 12:16:02] 2025-07-30 12:16:01,647 [wrapper] pilotpid: 2370445
[2025-07-30 12:16:02] 2025-07-30 12:16:01,661 [wrapper] Pilot exit status: 0
[2025-07-30 12:16:02] 2025-07-30 12:16:01,780 [wrapper] pandaids: 6746329832
[2025-07-30 12:16:02] 2025-07-30 12:16:01,907 [wrapper] cleanup supervisor_pilot 2438102 2370446
[2025-07-30 12:16:02] 2025-07-30 12:16:01,955 [wrapper] Test setup, not cleaning
[2025-07-30 12:16:02] 2025-07-30 12:16:01,983 [wrapper] apfmon messages muted
[2025-07-30 12:16:02] 2025-07-30 12:16:02,020 [wrapper] ==== wrapper stdout END ====
[2025-07-30 12:16:02] 2025-07-30 12:16:02,067 [wrapper] ==== wrapper stderr END ====
[2025-07-30 12:16:02]  *** Error codes and diagnostics ***
[2025-07-30 12:16:02]     "exeErrorCode": 0,
[2025-07-30 12:16:02]     "exeErrorDiag": "",
[2025-07-30 12:16:02]     "pilotErrorCode": 0,
[2025-07-30 12:16:02]     "pilotErrorDiag": "",
[2025-07-30 12:16:02]  *** Listing of results directory ***
[2025-07-30 12:16:02] total 412936
[2025-07-30 12:16:02] -rw-r--r-- 1 boinc boinc    530466 Jul 27 06:49 pilot3.tar.gz
[2025-07-30 12:16:02] -rwx------ 1 boinc boinc     36292 Jul 27 07:05 runpilot2-wrapper.sh
[2025-07-30 12:16:02] -rw-r--r-- 1 boinc boinc      5112 Jul 27 07:05 queuedata.json
[2025-07-30 12:16:02] -rw-rw-r-- 1 boinc boinc       100 Jul 30 08:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-30 12:16:02] -rwxr-xr-x 1 boinc boinc      7986 Jul 30 08:05 run_atlas
[2025-07-30 12:16:02] -rw-rw-r-- 1 boinc boinc       105 Jul 30 08:05 job.xml
[2025-07-30 12:16:02] -rw-r--r-- 2 boinc boinc 238814456 Jul 30 08:05 EVNT.45758414._000003.pool.root.1
[2025-07-30 12:16:02] -rw-r--r-- 2 boinc boinc     15095 Jul 30 08:05 start_atlas.sh
[2025-07-30 12:16:02] drwxrwx--x 2 boinc boinc      4096 Jul 30 08:05 shared
[2025-07-30 12:16:02] -rw-r--r-- 2 boinc boinc    542886 Jul 30 08:05 input.tar.gz
[2025-07-30 12:16:02] -rw-rw-r-- 1 boinc boinc      9357 Jul 30 08:05 init_data.xml
[2025-07-30 12:16:02] -rw-rw-r-- 1 boinc boinc         0 Jul 30 08:05 boinc_lockfile
[2025-07-30 12:16:02] -rw-rw-r-- 1 boinc boinc      2562 Jul 30 08:05 pandaJob.out
[2025-07-30 12:16:02] -rw------- 1 boinc boinc    977358 Jul 30 08:06 agis_schedconf.cvmfs.json
[2025-07-30 12:16:02] drwx------ 4 boinc boinc      4096 Jul 30 08:06 pilot3
[2025-07-30 12:16:02] -rw------- 1 boinc boinc 176399931 Jul 30 12:13 HITS.45758416._000064.pool.root.1
[2025-07-30 12:16:02] -rw-rw-r-- 1 boinc boinc       530 Jul 30 12:14 boinc_task_state.xml
[2025-07-30 12:16:02] -rw------- 1 boinc boinc      1018 Jul 30 12:14 memory_monitor_summary.json
[2025-07-30 12:16:02] -rw------- 1 boinc boinc   1589827 Jul 30 12:14 agis_ddmendpoints.agis.ALL.json
[2025-07-30 12:16:02] -rw------- 1 boinc boinc    461152 Jul 30 12:14 log.45758416._000064.job.log.tgz.1
[2025-07-30 12:16:02] -rw------- 1 boinc boinc        95 Jul 30 12:15 pilot_heartbeat.json
[2025-07-30 12:16:02] -rw------- 1 boinc boinc      7754 Jul 30 12:15 heartbeat.json
[2025-07-30 12:16:02] -rw-rw-r-- 1 boinc boinc        28 Jul 30 12:15 wrapper_checkpoint.txt
[2025-07-30 12:16:02] -rw-rw-r-- 1 boinc boinc      8192 Jul 30 12:15 boinc_mmap_file
[2025-07-30 12:16:02] -rw------- 1 boinc boinc       822 Jul 30 12:16 pilotlog.txt
[2025-07-30 12:16:02] -rw------- 1 boinc boinc   1416366 Jul 30 12:16 log.45758416._000064.job.log.1
[2025-07-30 12:16:02] -rw------- 1 boinc boinc       357 Jul 30 12:16 output.list
[2025-07-30 12:16:02] -rw-rw-r-- 1 boinc boinc       620 Jul 30 12:16 runtime_log
[2025-07-30 12:16:02] -rw------- 1 boinc boinc   1894400 Jul 30 12:16 result.tar.gz
[2025-07-30 12:16:02] -rw-rw-r-- 1 boinc boinc      8950 Jul 30 12:16 runtime_log.err
[2025-07-30 12:16:02] -rw------- 1 boinc boinc       654 Jul 30 12:16 UPsKDmycA07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1aULDmmTuXNm.diag
[2025-07-30 12:16:02] -rw-rw-r-- 1 boinc boinc     20727 Jul 30 12:16 stderr.txt
[2025-07-30 12:16:02] HITS file was successfully produced:
[2025-07-30 12:16:02] -rw------- 1 boinc boinc 176399931 Jul 30 12:13 shared/HITS.pool.root.1
[2025-07-30 12:16:02]  *** Contents of shared directory: ***
[2025-07-30 12:16:02] total 407896
[2025-07-30 12:16:02] -rw-r--r-- 2 boinc boinc 238814456 Jul 30 08:05 ATLAS.root_0
[2025-07-30 12:16:02] -rw-r--r-- 2 boinc boinc     15095 Jul 30 08:05 start_atlas.sh
[2025-07-30 12:16:02] -rw-r--r-- 2 boinc boinc    542886 Jul 30 08:05 input.tar.gz
[2025-07-30 12:16:02] -rw------- 1 boinc boinc 176399931 Jul 30 12:13 HITS.pool.root.1
[2025-07-30 12:16:02] -rw------- 1 boinc boinc   1894400 Jul 30 12:16 result.tar.gz
12:16:04 (2366815): run_atlas exited; CPU time 59185.948325
12:16:04 (2366815): called boinc_finish(0)

</stderr_txt>
]]>

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