Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-27 14:30:01 (3758690): Detected: vboxwrapper 26206
2025-07-27 14:30:01 (3758690): Detected: BOINC client v8.2.4
2025-07-27 14:30:01 (3758690): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-07-27 14:30:01 (3758690): Successfully copied 'init_data.xml' to the shared directory.
2025-07-27 14:30:01 (3758690): Create VM. (boinc_42a80445fedc830d, slot#3)
2025-07-27 14:30:01 (3758690): Setting Memory Size for VM. (4800MB)
2025-07-27 14:30:01 (3758690): Setting CPU Count for VM. (8)
2025-07-27 14:30:02 (3758690): Setting Chipset Options for VM.
2025-07-27 14:30:02 (3758690): Setting Graphics Controller Options for VM.
2025-07-27 14:30:02 (3758690): Setting Boot Options for VM.
2025-07-27 14:30:02 (3758690): Setting Network Configuration for NAT.
2025-07-27 14:30:02 (3758690): Enabling VM Network Access.
2025-07-27 14:30:02 (3758690): Disabling USB Support for VM.
2025-07-27 14:30:02 (3758690): Disabling COM Port Support for VM.
2025-07-27 14:30:02 (3758690): Disabling LPT Port Support for VM.
2025-07-27 14:30:02 (3758690): Disabling Audio Support for VM.
2025-07-27 14:30:02 (3758690): Disabling Clipboard Support for VM.
2025-07-27 14:30:03 (3758690): Disabling Drag and Drop Support for VM.
2025-07-27 14:30:03 (3758690): Adding storage controller(s) to VM.
2025-07-27 14:30:03 (3758690): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-27 14:30:03 (3758690): Adding VirtualBox Guest Additions to VM.
2025-07-27 14:30:03 (3758690): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-27 14:30:03 (3758690): forwarding host port 44333 to guest port 80
2025-07-27 14:30:03 (3758690): Enabling remote desktop for VM.
2025-07-27 14:30:03 (3758690): Enabling shared directory for VM.
2025-07-27 14:30:04 (3758690): Starting VM using VBoxManage interface. (boinc_42a80445fedc830d, slot#3)
2025-07-27 14:30:05 (3758690): Successfully started VM. (PID = '3759265')
2025-07-27 14:30:05 (3758690): Reporting VM Process ID to BOINC.
2025-07-27 14:30:05 (3758690): Guest Log: BIOS: VirtualBox 7.0.22
2025-07-27 14:30:05 (3758690): Guest Log: CPUID EDX: 0x178bfbff
2025-07-27 14:30:05 (3758690): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-27 14:30:05 (3758690): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-27 14:30:05 (3758690): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-27 14:30:05 (3758690): Detected: Web Application Enabled (http://localhost:44333)
2025-07-27 14:30:05 (3758690): Detected: Remote Desktop Enabled (localhost:33949)
2025-07-27 14:30:05 (3758690): Preference change detected
2025-07-27 14:30:05 (3758690): Setting CPU throttle for VM. (60%)
2025-07-27 14:30:05 (3758690): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-27 14:30:07 (3758690): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-27 14:30:07 (3758690): Guest Log: BIOS: Booting from Hard Disk...
2025-07-27 14:30:11 (3758690): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-27 14:30:11 (3758690): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-27 14:30:11 (3758690): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-27 14:30:20 (3758690): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-27 14:30:20 (3758690): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-27 14:30:27 (3758690): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-27 14:30:27 (3758690): Guest Log: 00:00:00.000175 main     Log opened 2025-07-27T18:30:25.528380000Z
2025-07-27 14:30:27 (3758690): Guest Log: 00:00:00.000413 main     OS Product: Linux
2025-07-27 14:30:27 (3758690): Guest Log: 00:00:00.000445 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-27 14:30:27 (3758690): Guest Log: 00:00:00.000470 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-27 14:30:27 (3758690): Guest Log: 00:00:00.000494 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-27 14:30:27 (3758690): Guest Log: 00:00:00.000495 main     Process ID: 1366
2025-07-27 14:30:27 (3758690): Guest Log: 00:00:00.000496 main     Package type: LINUX_64BITS_GENERIC
2025-07-27 14:30:27 (3758690): Guest Log: 00:00:00.001444 main     5.2.32 r132073 started. Verbose level = 0
2025-07-27 14:30:27 (3758690): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-27 14:30:27 (3758690): Guest Log: [INFO] Mounting shared directory
2025-07-27 14:30:27 (3758690): Guest Log: [INFO] Checking for init_data.xml
2025-07-27 14:30:31 (3758690): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-27 14:30:31 (3758690): Guest Log: [INFO] Detected branch: prod
2025-07-27 14:30:31 (3758690): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-27 14:30:31 (3758690): Guest Log: Copying input files
2025-07-27 14:30:32 (3758690): Guest Log: Copied input files into RunAtlas.
2025-07-27 14:30:32 (3758690): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-27 14:30:32 (3758690): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-27 14:30:32 (3758690): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-27 14:30:32 (3758690): Guest Log: Further information can be found at the LHC@home message board.
2025-07-27 14:30:41 (3758690): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-27 14:30:41 (3758690): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-27 14:30:41 (3758690): Guest Log: 2.6.3.0 1642 0 32164 148821 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-27 14:30:42 (3758690): Guest Log: copied the webapp to /var/www
2025-07-27 14:30:42 (3758690): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-27 14:30:42 (3758690): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-27 14:30:42 (3758690): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-27 14:30:42 (3758690): Guest Log:  *** Starting ATLAS job. (PandaID=6746303470 taskID=45743349) ***
2025-07-27 14:34:23 (3758690): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 14:34:43 (3758690): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 15:03:40 (3758690): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 15:04:00 (3758690): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 16:07:33 (3758690): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 16:07:53 (3758690): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 16:10:08 (3758690): Status Report: Elapsed Time: '6000.000000'
2025-07-27 16:10:08 (3758690): Status Report: CPU Time: '25593.100000'
2025-07-27 16:37:50 (3758690): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 16:38:11 (3758690): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 16:41:51 (3758690): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 16:42:11 (3758690): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 16:42:21 (3758690): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 16:42:41 (3758690): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 16:43:24 (3758690): Guest Log:  *** Job finished ***
2025-07-27 16:43:24 (3758690): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:12,693 | INFO     | all workflow threads have been joined
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:12,693 | INFO     | end of generic workflow (traces error code: 0)
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:12,693 | INFO     | traces error code: 0
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:12,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:23,579 | INFO     | PID=6003 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:23,580 | INFO     | found 0 job(s) in 20 queues
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:23,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:23,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:23,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:23,580 | INFO     | [monitor] control thread has ended
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:23,688 [wrapper] ==== pilot stdout END ====
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:23,695 [wrapper] ==== wrapper stdout RESUME ====
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:23,701 [wrapper] pilotpid: 6003
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:23,707 [wrapper] Pilot exit status: 0
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:23,968 [wrapper] pandaids: 6746303470
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:24,014 [wrapper] cleanup supervisor_pilot  5227 6004
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:24,021 [wrapper] Test setup, not cleaning
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:24,031 [wrapper] apfmon messages muted
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:24,039 [wrapper] ==== wrapper stdout END ====
2025-07-27 16:43:24 (3758690): Guest Log: 2025-07-27 20:41:24,046 [wrapper] ==== wrapper stderr END ====
2025-07-27 16:43:24 (3758690): Guest Log:  *** Error codes and diagnostics ***
2025-07-27 16:43:24 (3758690): Guest Log:     "exeErrorCode": 0,
2025-07-27 16:43:24 (3758690): Guest Log:     "exeErrorDiag": "",
2025-07-27 16:43:24 (3758690): Guest Log:     "pilotErrorCode": 0,
2025-07-27 16:43:24 (3758690): Guest Log:     "pilotErrorDiag": "",
2025-07-27 16:43:24 (3758690): Guest Log:  *** Listing of results directory ***
2025-07-27 16:43:24 (3758690): Guest Log: total 212904
2025-07-27 16:43:24 (3758690): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 27 06:49 pilot3.tar.gz
2025-07-27 16:43:24 (3758690): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 27 06:59 runpilot2-wrapper.sh
2025-07-27 16:43:24 (3758690): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 27 06:59 queuedata.json
2025-07-27 16:43:24 (3758690): Guest Log: -rw-r--r--. 1 atlas atlas    542892 Jul 27 18:30 input.tar.gz
2025-07-27 16:43:24 (3758690): Guest Log: -rw-r--r--. 1 atlas atlas     15095 Jul 27 18:30 start_atlas.sh
2025-07-27 16:43:24 (3758690): Guest Log: -rw-r--r--. 1 atlas atlas      6359 Jul 27 18:30 init_data.xml
2025-07-27 16:43:24 (3758690): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 27 18:30 EVNT.45743347._002599.pool.root.1 -> /data/./ATLAS.root_0
2025-07-27 16:43:24 (3758690): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Jul 27 18:30 pandaJob.out
2025-07-27 16:43:24 (3758690): Guest Log: -rw-------. 1 atlas atlas    980125 Jul 27 18:31 agis_schedconf.cvmfs.json
2025-07-27 16:43:24 (3758690): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 27 18:31 agis_ddmendpoints.agis.ALL.json
2025-07-27 16:43:24 (3758690): Guest Log: drwx------. 4 atlas atlas      4096 Jul 27 18:31 pilot3
2025-07-27 16:43:24 (3758690): Guest Log: -rw-------. 1 atlas atlas 212370775 Jul 27 20:39 HITS.45743349._046054.pool.root.1
2025-07-27 16:43:24 (3758690): Guest Log: -rw-------. 1 atlas atlas      1024 Jul 27 20:40 memory_monitor_summary.json
2025-07-27 16:43:24 (3758690): Guest Log: -rw-------. 1 atlas atlas    327581 Jul 27 20:40 log.45743349._046054.job.log.tgz.1
2025-07-27 16:43:24 (3758690): Guest Log: -rw-------. 1 atlas atlas        95 Jul 27 20:40 pilot_heartbeat.json
2025-07-27 16:43:24 (3758690): Guest Log: -rw-------. 1 atlas atlas      7783 Jul 27 20:40 heartbeat.json
2025-07-27 16:43:24 (3758690): Guest Log: -rw-------. 1 atlas atlas       744 Jul 27 20:41 pilotlog.txt
2025-07-27 16:43:24 (3758690): Guest Log: -rw-------. 1 atlas atlas    593483 Jul 27 20:41 log.45743349._046054.job.log.1
2025-07-27 16:43:24 (3758690): Guest Log: -rw-------. 1 atlas atlas       357 Jul 27 20:41 output.list
2025-07-27 16:43:24 (3758690): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 27 20:41 runtime_log
2025-07-27 16:43:24 (3758690): Guest Log: -rw-------. 1 atlas atlas    942080 Jul 27 20:41 result.tar.gz
2025-07-27 16:43:24 (3758690): Guest Log: -rw-r--r--. 1 atlas atlas      8623 Jul 27 20:41 runtime_log.err
2025-07-27 16:43:24 (3758690): Guest Log: -rw-------. 1 atlas atlas       663 Jul 27 20:41 KrxNDmEXA07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4ZULDm8Fhatn.diag
2025-07-27 16:43:24 (3758690): Guest Log: Looking for outputfile HITS.45743349._046054.pool.root.1
2025-07-27 16:43:24 (3758690): Guest Log: HITS file was successfully produced
2025-07-27 16:43:24 (3758690): Guest Log: -rw-------. 1 atlas atlas 212370775 Jul 27 20:39 /home/atlas/RunAtlas/HITS.45743349._046054.pool.root.1
2025-07-27 16:43:24 (3758690): Guest Log: Successfully finished the ATLAS job!
2025-07-27 16:43:24 (3758690): Guest Log: Copying the results back to the shared directory!
2025-07-27 16:43:24 (3758690): Guest Log:  *** Contents of shared directory: ***
2025-07-27 16:43:24 (3758690): Guest Log: total 224824
2025-07-27 16:43:24 (3758690): Guest Log: -rw-r--r--. 1 root root 228704765 Jul 27 18:30 ATLAS.root_0
2025-07-27 16:43:24 (3758690): Guest Log: -rw-r--r--. 1 root root      6359 Jul 27 18:30 init_data.xml
2025-07-27 16:43:24 (3758690): Guest Log: -rw-r--r--. 1 root root    542892 Jul 27 18:30 input.tar.gz
2025-07-27 16:43:24 (3758690): Guest Log: -rw-r--r--. 1 root root    942080 Jul 27  2025 result.tar.gz
2025-07-27 16:43:24 (3758690): Guest Log: -rw-r--r--. 1 root root     15095 Jul 27 18:30 start_atlas.sh
2025-07-27 16:43:24 (3758690): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-27 16:43:24 (3758690): VM Completion File Detected.
2025-07-27 16:43:24 (3758690): Powering off VM.
2025-07-27 16:43:25 (3758690): Successfully stopped VM.
2025-07-27 16:43:25 (3758690): Deregistering VM. (boinc_42a80445fedc830d, slot#3)
2025-07-27 16:43:25 (3758690): Removing network bandwidth throttle group from VM.
2025-07-27 16:43:25 (3758690): Removing VM from VirtualBox.
16:43:31 (3758690): called boinc_finish(0)

</stderr_txt>
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