Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:15:03 (3510664): wrapper (7.7.26015): starting
20:15:03 (3510664): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 20:15:03] Arguments: --nthreads 12
[2025-07-27 20:15:03] Threads: 12
[2025-07-27 20:15:03] Checking for CVMFS
[2025-07-27 20:15:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:15:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:15:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:15:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:15:03] 2.13.1.0 659355 8473 107272 148821 3 16 2460967 4097024 0 130560 0 7119728 99.991 307859 8234 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-27 20:15:03] CVMFS is ok
[2025-07-27 20:15:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:15:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:15:03] Further information can be found at the LHC@home message board.
[2025-07-27 20:15:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:15:03] Checking for apptainer binary...
[2025-07-27 20:15:03] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-27 20:15:03] apptainer is not installed, using version from CVMFS
[2025-07-27 20:15:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:15:04] pckelar8.cern.ch
[2025-07-27 20:15:04] apptainer works
[2025-07-27 20:15:04] Set ATHENA_PROC_NUMBER=12
[2025-07-27 20:15:04] Set ATHENA_CORE_NUMBER=12
[2025-07-27 20:15:04] Starting ATLAS job with PandaID=6746303158
[2025-07-27 20:15:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 21:31:03]  *** The last 200 lines of the pilot log: ***
[2025-07-27 21:31:03]  is_tar=False
[2025-07-27 21:31:03]  lfn=log.45743349._045754.job.log.tgz.1
[2025-07-27 21:31:03]  mtime=0
[2025-07-27 21:31:03]  protocol_id=None
[2025-07-27 21:31:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 21:31:03]  replicas=None
[2025-07-27 21:31:03]  scope=mc23_13p6TeV
[2025-07-27 21:31:03]  status=None
[2025-07-27 21:31:03]  status_code=0
[2025-07-27 21:31:03]  storage_token=
[2025-07-27 21:31:03]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6746303158/log.45743349._045754.job.log.tgz.1
[2025-07-27 21:31:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/67/log.45743349._045754.job.log.tgz.1
[2025-07-27 21:31:03]  workdir=None
[2025-07-27 21:31:03] ]
[2025-07-27 21:31:03] 2025-07-27 19:30:24,730 | INFO     | transferring file log.45743349._045754.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6746303158/log.45743349._045754.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 21:31:03] 2025-07-27 19:30:24,731 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6746303158/log.45743349._045754.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._045754.job
[2025-07-27 21:31:03] 2025-07-27 19:30:24,748 | INFO     | adding to output.list: log.45743349._045754.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/67/log.45743349._045754.job.log.tg
[2025-07-27 21:31:03] 2025-07-27 19:30:24,749 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 21:31:03] 2025-07-27 19:30:24,749 | INFO     | summary of transferred files:
[2025-07-27 21:31:03] 2025-07-27 19:30:24,749 | INFO     |  -- lfn=log.45743349._045754.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 21:31:03] 2025-07-27 19:30:24,749 | INFO     | stage-out finished correctly
[2025-07-27 21:31:03] 2025-07-27 19:30:24,816 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 21:31:03] 2025-07-27 19:30:25,933 | WARNING  | process 3521452 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 21:31:03] 2025-07-27 19:30:25,933 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6746303158/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:31:03] 2025-07-27 19:30:25,996 | INFO     | number of running child processes to parent process 3521452: 1
[2025-07-27 21:31:03] 2025-07-27 19:30:25,996 | INFO     | maximum number of monitored processes: 6
[2025-07-27 21:31:03] 2025-07-27 19:30:26,867 | INFO     | job 6746303158 has state=finished
[2025-07-27 21:31:03] 2025-07-27 19:30:26,867 | INFO     | preparing for final server update for job 6746303158 in state='finished'
[2025-07-27 21:31:03] 2025-07-27 19:30:26,867 | INFO     | this job has now completed (state=finished)
[2025-07-27 21:31:03] 2025-07-27 19:30:26,867 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 21:31:03] 2025-07-27 19:30:26,867 | INFO     | log transfer has been attempted: DONE
[2025-07-27 21:31:03] 2025-07-27 19:30:26,867 | INFO     | job 6746303158 has finished - writing final server update
[2025-07-27 21:31:03] 2025-07-27 19:30:26,868 | INFO     | total number of processed events: 400 (read)
[2025-07-27 21:31:03] 2025-07-27 19:30:26,869 | INFO     | executing command: lscpu
[2025-07-27 21:31:03] 2025-07-27 19:30:26,889 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 21:31:03] 2025-07-27 19:30:28,500 | INFO     | monitor loop #344: job 0:6746303158 is in state 'finished'
[2025-07-27 21:31:03] 2025-07-27 19:30:28,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:31:03] 2025-07-27 19:30:28,976 | INFO     | PID=3514335 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 21:31:03] 2025-07-27 19:30:30,838 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 21:31:03] 2025-07-27 19:30:30,840 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2476.1862499999993
[2025-07-27 21:31:03] 2025-07-27 19:30:30,842 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6746303158/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:31:03] 2025-07-27 19:30:30,842 | INFO     | extracted standard info from prmon json
[2025-07-27 21:31:03] 2025-07-27 19:30:30,842 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 21:31:03] 2025-07-27 19:30:30,843 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 21:31:03] 2025-07-27 19:30:30,843 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 21:31:03] 2025-07-27 19:30:30,843 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 21:31:03] 2025-07-27 19:30:30,844 | INFO     | fitting pss+swap vs Time
[2025-07-27 21:31:03] 2025-07-27 19:30:30,844 | INFO     | sum of square deviations: 93240818.0
[2025-07-27 21:31:03] 2025-07-27 19:30:30,845 | INFO     | sum of deviations: -8301411127.000001
[2025-07-27 21:31:03] 2025-07-27 19:30:30,845 | INFO     | mean x: 1753642451.0
[2025-07-27 21:31:03] 2025-07-27 19:30:30,845 | INFO     | mean y: 3073629.194029851
[2025-07-27 21:31:03] 2025-07-27 19:30:30,845 | INFO     | -- intersect: 156133267119.2485
[2025-07-27 21:31:03] 2025-07-27 19:30:30,845 | INFO     | intersect: 156133267119.2485
[2025-07-27 21:31:03] 2025-07-27 19:30:30,845 | INFO     | chi2: 0.12624648986321077
[2025-07-27 21:31:03] 2025-07-27 19:30:30,845 | INFO     | -- intersect: 156133267119.2485
[2025-07-27 21:31:03] 2025-07-27 19:30:30,846 | INFO     | current memory leak: -89.03 B/s (using 67 data points, chi2=0.13)
[2025-07-27 21:31:03] 2025-07-27 19:30:30,846 | INFO     | could have reported an average CPU frequency of 2562 MHz (6 samples)
[2025-07-27 21:31:03] 2025-07-27 19:30:30,846 | INFO     | ..............................
[2025-07-27 21:31:03] 2025-07-27 19:30:30,846 | INFO     | . Timing measurements:
[2025-07-27 21:31:03] 2025-07-27 19:30:30,846 | INFO     | . get job = 0 s
[2025-07-27 21:31:03] 2025-07-27 19:30:30,846 | INFO     | . initial setup = 1 s
[2025-07-27 21:31:03] 2025-07-27 19:30:30,846 | INFO     | . payload setup = 5 s
[2025-07-27 21:31:03] 2025-07-27 19:30:30,846 | INFO     | . stage-in = 0 s
[2025-07-27 21:31:03] 2025-07-27 19:30:30,846 | INFO     | . payload execution = 4490 s
[2025-07-27 21:31:03] 2025-07-27 19:30:30,847 | INFO     | . stage-out = 0 s
[2025-07-27 21:31:03] 2025-07-27 19:30:30,847 | INFO     | . log creation = 0 s
[2025-07-27 21:31:03] 2025-07-27 19:30:30,847 | INFO     | ..............................
[2025-07-27 21:31:03] 2025-07-27 19:30:30,918 | INFO     | 
[2025-07-27 21:31:03] 2025-07-27 19:30:30,918 | INFO     | job summary report
[2025-07-27 21:31:03] 2025-07-27 19:30:30,918 | INFO     | --------------------------------------------------
[2025-07-27 21:31:03] 2025-07-27 19:30:30,918 | INFO     | PanDA job id: 6746303158
[2025-07-27 21:31:03] 2025-07-27 19:30:30,918 | INFO     | task id: 45743349
[2025-07-27 21:31:03] 2025-07-27 19:30:30,918 | INFO     | errors: (none)
[2025-07-27 21:31:03] 2025-07-27 19:30:30,918 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 21:31:03] 2025-07-27 19:30:30,918 | INFO     | pilot state: finished 
[2025-07-27 21:31:03] 2025-07-27 19:30:30,918 | INFO     | transexitcode: 0
[2025-07-27 21:31:03] 2025-07-27 19:30:30,919 | INFO     | exeerrorcode: 0
[2025-07-27 21:31:03] 2025-07-27 19:30:30,919 | INFO     | exeerrordiag: 
[2025-07-27 21:31:03] 2025-07-27 19:30:30,919 | INFO     | exitcode: 0
[2025-07-27 21:31:03] 2025-07-27 19:30:30,919 | INFO     | exitmsg: OK
[2025-07-27 21:31:03] 2025-07-27 19:30:30,919 | INFO     | cpuconsumptiontime: 48868 s
[2025-07-27 21:31:03] 2025-07-27 19:30:30,919 | INFO     | nevents: 400
[2025-07-27 21:31:03] 2025-07-27 19:30:30,919 | INFO     | neventsw: 0
[2025-07-27 21:31:03] 2025-07-27 19:30:30,919 | INFO     | pid: 3521452
[2025-07-27 21:31:03] 2025-07-27 19:30:30,919 | INFO     | pgrp: 3521452
[2025-07-27 21:31:03] 2025-07-27 19:30:30,919 | INFO     | corecount: 12
[2025-07-27 21:31:03] 2025-07-27 19:30:30,919 | INFO     | event service: False
[2025-07-27 21:31:03] 2025-07-27 19:30:30,920 | INFO     | sizes: {0: 2397475, 3: 2397737, 11: 2397765, 4500: 2432975, 4501: 2432975, 4507: 2433169}
[2025-07-27 21:31:03] 2025-07-27 19:30:30,920 | INFO     | --------------------------------------------------
[2025-07-27 21:31:03] 2025-07-27 19:30:30,920 | INFO     | 
[2025-07-27 21:31:03] 2025-07-27 19:30:30,920 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 21:31:03] 2025-07-27 19:30:30,939 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,939 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,939 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,939 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,939 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,939 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,940 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,940 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,941 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,941 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 21:31:03] 2025-07-27 19:30:30,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,941 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 21:31:03] 2025-07-27 19:30:30,941 | INFO     | job 6746303158 has completed (purged errors)
[2025-07-27 21:31:03] 2025-07-27 19:30:30,941 | INFO     | overall cleanup function is called
[2025-07-27 21:31:03] 2025-07-27 19:30:31,948 | INFO     | --- collectZombieJob: --- 10, [3521452]
[2025-07-27 21:31:03] 2025-07-27 19:30:31,949 | INFO     | zombie collector waiting for pid 3521452
[2025-07-27 21:31:03] 2025-07-27 19:30:31,949 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 21:31:03] 2025-07-27 19:30:31,949 | INFO     | collected zombie processes
[2025-07-27 21:31:03] 2025-07-27 19:30:31,949 | INFO     | will attempt to kill all subprocesses of pid=3521452
[2025-07-27 21:31:03] 2025-07-27 19:30:32,018 | INFO     | process IDs to be killed: [3521452] (in reverse order)
[2025-07-27 21:31:03] 2025-07-27 19:30:32,051 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 21:31:03] 2025-07-27 19:30:32,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 21:31:03] 2025-07-27 19:30:32,053 | INFO     | did not find any defunct processes belonging to 3521452
[2025-07-27 21:31:03] 2025-07-27 19:30:32,055 | INFO     | did not find any defunct processes belonging to 3521452
[2025-07-27 21:31:03] 2025-07-27 19:30:32,055 | INFO     | ready for new job
[2025-07-27 21:31:03] 2025-07-27 19:30:32,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 21:31:03] 2025-07-27 19:30:32,057 | INFO     | ***************************************
[2025-07-27 21:31:03] 2025-07-27 19:30:32,057 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 21:31:03] 2025-07-27 19:30:32,057 | INFO     | ***************************************
[2025-07-27 21:31:03] 2025-07-27 19:30:32,057 | INFO     | 
[2025-07-27 21:31:03] 2025-07-27 19:30:32,058 | INFO     | architecture information:
[2025-07-27 21:31:03] 2025-07-27 19:30:32,058 | INFO     | executing command: cat /etc/os-release
[2025-07-27 21:31:03] 2025-07-27 19:30:32,068 | INFO     | cat /etc/os-release:
[2025-07-27 21:31:03] NAME="CentOS Linux"
[2025-07-27 21:31:03] VERSION="7 (Core)"
[2025-07-27 21:31:03] ID="centos"
[2025-07-27 21:31:03] ID_LIKE="rhel fedora"
[2025-07-27 21:31:03] VERSION_ID="7"
[2025-07-27 21:31:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 21:31:03] ANSI_COLOR="0;31"
[2025-07-27 21:31:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 21:31:03] HOME_URL="https://www.centos.org/"
[2025-07-27 21:31:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 21:31:03] 
[2025-07-27 21:31:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 21:31:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 21:31:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 21:31:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 21:31:03] 
[2025-07-27 21:31:03] 2025-07-27 19:30:32,068 | INFO     | ***************************************
[2025-07-27 21:31:03] 2025-07-27 19:30:32,571 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 21:31:03] 2025-07-27 19:30:32,583 | INFO     | sufficient remaining disk space (1717682831360 B)
[2025-07-27 21:31:03] 2025-07-27 19:30:32,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 21:31:03] 2025-07-27 19:30:32,583 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 21:31:03] 2025-07-27 19:30:32,584 | INFO     | update_server=False
[2025-07-27 21:31:03] 2025-07-27 19:30:32,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 21:31:03] 2025-07-27 19:30:32,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:31:03] 2025-07-27 19:30:32,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:31:03] 2025-07-27 19:30:32,584 | INFO     | aborting loop
[2025-07-27 21:31:03] 2025-07-27 19:30:32,619 | INFO     | all job control threads have been joined
[2025-07-27 21:31:03] 2025-07-27 19:30:32,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 21:31:03] 2025-07-27 19:30:33,122 | INFO     | all data control threads have been joined
[2025-07-27 21:31:03] 2025-07-27 19:30:33,589 | INFO     | [job] retrieve thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:33,590 | INFO     | [job] queue monitor thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:33,590 | INFO     | [job] job monitor thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:33,596 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:33,625 | INFO     | [job] control thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:33,759 | INFO     | [payload] failed_post thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:33,781 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:33,822 | INFO     | [data] copytool_in thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:33,935 | INFO     | all payload control threads have been joined
[2025-07-27 21:31:03] 2025-07-27 19:30:34,115 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:34,127 | INFO     | [data] control thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:34,562 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:34,797 | INFO     | [payload] validate_post thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:34,831 | INFO     | [data] copytool_out thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:34,941 | INFO     | [payload] control thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:34,943 | INFO     | [job] validate thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:35,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 21:31:03] 2025-07-27 19:30:39,397 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 21:31:03] 2025-07-27 19:30:39,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140400226346816)>', '<ExcThread(monitor, started 140399385503488)>']
[2025-07-27 21:31:03] 2025-07-27 19:30:44,732 | INFO     | all workflow threads have been joined
[2025-07-27 21:31:03] 2025-07-27 19:30:44,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 21:31:03] 2025-07-27 19:30:44,733 | INFO     | traces error code: 0
[2025-07-27 21:31:03] 2025-07-27 19:30:44,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 21:31:03] 2025-07-27 19:31:03,153 | INFO     | PID=3514335 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 21:31:03] 2025-07-27 19:31:03,154 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 21:31:03] 2025-07-27 19:31:03,154 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 21:31:03] 2025-07-27 19:31:03,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 21:31:03] 2025-07-27 19:31:03,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 21:31:03] 2025-07-27 19:31:03,154 | INFO     | [monitor] control thread has ended
[2025-07-27 21:31:03] 2025-07-27 19:31:03,227 [wrapper] ==== pilot stdout END ====
[2025-07-27 21:31:03] 2025-07-27 19:31:03,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 21:31:03] 2025-07-27 19:31:03,233 [wrapper] pilotpid: 3514335
[2025-07-27 21:31:03] 2025-07-27 19:31:03,235 [wrapper] Pilot exit status: 0
[2025-07-27 21:31:03] 2025-07-27 19:31:03,243 [wrapper] pandaids: 6746303158
[2025-07-27 21:31:03] 2025-07-27 19:31:03,262 [wrapper] cleanup supervisor_pilot 3536173 3514336
[2025-07-27 21:31:03] 2025-07-27 19:31:03,263 [wrapper] Test setup, not cleaning
[2025-07-27 21:31:03] 2025-07-27 19:31:03,265 [wrapper] apfmon messages muted
[2025-07-27 21:31:03] 2025-07-27 19:31:03,267 [wrapper] ==== wrapper stdout END ====
[2025-07-27 21:31:03] 2025-07-27 19:31:03,269 [wrapper] ==== wrapper stderr END ====
[2025-07-27 21:31:03]  *** Error codes and diagnostics ***
[2025-07-27 21:31:03]     "exeErrorCode": 0,
[2025-07-27 21:31:03]     "exeErrorDiag": "",
[2025-07-27 21:31:03]     "pilotErrorCode": 0,
[2025-07-27 21:31:03]     "pilotErrorDiag": "",
[2025-07-27 21:31:03]  *** Listing of results directory ***
[2025-07-27 21:31:03] total 435176
[2025-07-27 21:31:03] -rw-r--r-- 1 boinc boinc    530466 Jul 27 08:36 pilot3.tar.gz
[2025-07-27 21:31:03] -rwx------ 1 boinc boinc     36292 Jul 27 08:37 runpilot2-wrapper.sh
[2025-07-27 21:31:03] -rw-r--r-- 1 boinc boinc      5112 Jul 27 08:37 queuedata.json
[2025-07-27 21:31:03] -rw-r--r-- 1 boinc boinc       100 Jul 27 20:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 21:31:03] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 20:15 run_atlas
[2025-07-27 21:31:03] -rw-r--r-- 1 boinc boinc       105 Jul 27 20:15 job.xml
[2025-07-27 21:31:03] -rw-r--r-- 1 boinc boinc      6251 Jul 27 20:15 init_data.xml
[2025-07-27 21:31:03] -rw-r--r-- 2 boinc boinc 230758763 Jul 27 20:15 EVNT.45743347._002586.pool.root.1
[2025-07-27 21:31:03] -rw-r--r-- 2 boinc boinc     15095 Jul 27 20:15 start_atlas.sh
[2025-07-27 21:31:03] drwxrwx--x 2 boinc boinc      4096 Jul 27 20:15 shared
[2025-07-27 21:31:03] -rw-r--r-- 2 boinc boinc    542889 Jul 27 20:15 input.tar.gz
[2025-07-27 21:31:03] -rw-r--r-- 1 boinc boinc         0 Jul 27 20:15 boinc_lockfile
[2025-07-27 21:31:03] -rw-r--r-- 1 boinc boinc      2563 Jul 27 20:15 pandaJob.out
[2025-07-27 21:31:03] -rw------- 1 boinc boinc    980125 Jul 27 20:15 agis_schedconf.cvmfs.json
[2025-07-27 21:31:03] -rw------- 1 boinc boinc   1593052 Jul 27 20:15 agis_ddmendpoints.agis.ALL.json
[2025-07-27 21:31:03] drwx------ 4 boinc boinc      4096 Jul 27 20:15 pilot3
[2025-07-27 21:31:03] -rw------- 1 boinc boinc 209401677 Jul 27 21:29 HITS.45743349._045754.pool.root.1
[2025-07-27 21:31:03] -rw-r--r-- 1 boinc boinc       529 Jul 27 21:30 boinc_task_state.xml
[2025-07-27 21:31:03] -rw------- 1 boinc boinc      1017 Jul 27 21:30 memory_monitor_summary.json
[2025-07-27 21:31:03] -rw------- 1 boinc boinc    351305 Jul 27 21:30 log.45743349._045754.job.log.tgz.1
[2025-07-27 21:31:03] -rw------- 1 boinc boinc      7787 Jul 27 21:30 heartbeat.json
[2025-07-27 21:31:03] -rw-r--r-- 1 boinc boinc        27 Jul 27 21:31 wrapper_checkpoint.txt
[2025-07-27 21:31:03] -rw------- 1 boinc boinc        95 Jul 27 21:31 pilot_heartbeat.json
[2025-07-27 21:31:03] -rw------- 1 boinc boinc       747 Jul 27 21:31 pilotlog.txt
[2025-07-27 21:31:03] -rw-r--r-- 1 boinc boinc      8192 Jul 27 21:31 boinc_mmap_file
[2025-07-27 21:31:03] -rw------- 1 boinc boinc    441465 Jul 27 21:31 log.45743349._045754.job.log.1
[2025-07-27 21:31:03] -rw------- 1 boinc boinc       357 Jul 27 21:31 output.list
[2025-07-27 21:31:03] -rw-r--r-- 1 boinc boinc       620 Jul 27 21:31 runtime_log
[2025-07-27 21:31:03] -rw------- 1 boinc boinc    808960 Jul 27 21:31 result.tar.gz
[2025-07-27 21:31:03] -rw-r--r-- 1 boinc boinc      8684 Jul 27 21:31 runtime_log.err
[2025-07-27 21:31:03] -rw------- 1 boinc boinc       655 Jul 27 21:31 LvWNDmDCA07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWVULDmyu9m4n.diag
[2025-07-27 21:31:03] -rw-r--r-- 1 boinc boinc     21807 Jul 27 21:31 stderr.txt
[2025-07-27 21:31:03] HITS file was successfully produced:
[2025-07-27 21:31:03] -rw------- 1 boinc boinc 209401677 Jul 27 21:29 shared/HITS.pool.root.1
[2025-07-27 21:31:03]  *** Contents of shared directory: ***
[2025-07-27 21:31:03] total 431196
[2025-07-27 21:31:03] -rw-r--r-- 2 boinc boinc 230758763 Jul 27 20:15 ATLAS.root_0
[2025-07-27 21:31:03] -rw-r--r-- 2 boinc boinc     15095 Jul 27 20:15 start_atlas.sh
[2025-07-27 21:31:03] -rw-r--r-- 2 boinc boinc    542889 Jul 27 20:15 input.tar.gz
[2025-07-27 21:31:03] -rw------- 1 boinc boinc 209401677 Jul 27 21:29 HITS.pool.root.1
[2025-07-27 21:31:03] -rw------- 1 boinc boinc    808960 Jul 27 21:31 result.tar.gz
21:31:04 (3510664): run_atlas exited; CPU time 48888.255429
21:31:04 (3510664): called boinc_finish(0)

</stderr_txt>
]]>

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