Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:31:44 (2363174): wrapper (7.7.26015): starting
08:31:44 (2363174): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 08:31:44] Arguments: --nthreads 10
[2025-07-27 08:31:44] Threads: 10
[2025-07-27 08:31:44] Checking for CVMFS
[2025-07-27 08:31:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 08:31:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 08:31:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 08:31:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 08:31:45] 2.13.1.0 128637 5099 129116 148812 1 104 28536914 39288832 4574 16776704 0 4492780 99.804 6531006 44825 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 08:31:45] CVMFS is ok
[2025-07-27 08:31:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 08:31:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 08:31:45] Further information can be found at the LHC@home message board.
[2025-07-27 08:31:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 08:31:45] Checking for apptainer binary...
[2025-07-27 08:31:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 08:31:45] Running /usr/bin/apptainer --version
[2025-07-27 08:31:45] apptainer version 1.4.1-1.el9
[2025-07-27 08:31:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 08:31:45] c-211-17.aglt2.org
[2025-07-27 08:31:45] apptainer works
[2025-07-27 08:31:45] Set ATHENA_PROC_NUMBER=10
[2025-07-27 08:31:45] Set ATHENA_CORE_NUMBER=10
[2025-07-27 08:31:45] Starting ATLAS job with PandaID=6746303390
[2025-07-27 08:31:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 10:07:31]  *** The last 200 lines of the pilot log: ***
[2025-07-27 10:07:31]  is_tar=False
[2025-07-27 10:07:31]  lfn=log.45743349._045974.job.log.tgz.1
[2025-07-27 10:07:31]  mtime=0
[2025-07-27 10:07:31]  protocol_id=None
[2025-07-27 10:07:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 10:07:31]  replicas=None
[2025-07-27 10:07:31]  scope=mc23_13p6TeV
[2025-07-27 10:07:31]  status=None
[2025-07-27 10:07:31]  status_code=0
[2025-07-27 10:07:31]  storage_token=
[2025-07-27 10:07:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6746303390/log.45743349._045974.job.log.tgz.1
[2025-07-27 10:07:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/ed/log.45743349._045974.job.log.tgz.1
[2025-07-27 10:07:31]  workdir=None
[2025-07-27 10:07:31] ]
[2025-07-27 10:07:31] 2025-07-27 14:06:51,136 | INFO     | transferring file log.45743349._045974.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6746303390/log.45743349._045974.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 10:07:31] 2025-07-27 14:06:51,136 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6746303390/log.45743349._045974.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._045974.job
[2025-07-27 10:07:31] 2025-07-27 14:06:51,158 | INFO     | adding to output.list: log.45743349._045974.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/ed/log.45743349._045974.job.log.tg
[2025-07-27 10:07:31] 2025-07-27 14:06:51,159 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 10:07:31] 2025-07-27 14:06:51,159 | INFO     | summary of transferred files:
[2025-07-27 10:07:31] 2025-07-27 14:06:51,159 | INFO     |  -- lfn=log.45743349._045974.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 10:07:31] 2025-07-27 14:06:51,160 | INFO     | stage-out finished correctly
[2025-07-27 10:07:31] 2025-07-27 14:06:54,342 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 10:07:31] 2025-07-27 14:06:54,635 | INFO     | job 6746303390 has state=finished
[2025-07-27 10:07:31] 2025-07-27 14:06:54,635 | INFO     | preparing for final server update for job 6746303390 in state='finished'
[2025-07-27 10:07:31] 2025-07-27 14:06:54,636 | INFO     | this job has now completed (state=finished)
[2025-07-27 10:07:31] 2025-07-27 14:06:54,636 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 10:07:31] 2025-07-27 14:06:54,636 | INFO     | log transfer has been attempted: DONE
[2025-07-27 10:07:31] 2025-07-27 14:06:54,637 | INFO     | job 6746303390 has finished - writing final server update
[2025-07-27 10:07:31] 2025-07-27 14:06:54,637 | INFO     | total number of processed events: 400 (read)
[2025-07-27 10:07:31] 2025-07-27 14:06:54,640 | INFO     | executing command: lscpu
[2025-07-27 10:07:31] 2025-07-27 14:06:54,679 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 10:07:31] 2025-07-27 14:06:54,717 | WARNING  | process 2373195 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 10:07:31] 2025-07-27 14:06:54,718 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746303390/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 10:07:31] 2025-07-27 14:06:54,912 | INFO     | number of running child processes to parent process 2373195: 1
[2025-07-27 10:07:31] 2025-07-27 14:06:54,912 | INFO     | maximum number of monitored processes: 6
[2025-07-27 10:07:31] 2025-07-27 14:06:57,415 | INFO     | monitor loop #424: job 0:6746303390 is in state 'finished'
[2025-07-27 10:07:31] 2025-07-27 14:06:57,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 10:07:31] 2025-07-27 14:06:59,442 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 10:07:31] 2025-07-27 14:06:59,448 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1353750000007
[2025-07-27 10:07:31] 2025-07-27 14:06:59,454 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746303390/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 10:07:31] 2025-07-27 14:06:59,454 | INFO     | extracted standard info from prmon json
[2025-07-27 10:07:31] 2025-07-27 14:06:59,455 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 10:07:31] 2025-07-27 14:06:59,455 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 10:07:31] 2025-07-27 14:06:59,455 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 10:07:31] 2025-07-27 14:06:59,455 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 10:07:31] 2025-07-27 14:06:59,457 | INFO     | fitting pss+swap vs Time
[2025-07-27 10:07:31] 2025-07-27 14:06:59,457 | INFO     | sum of square deviations: 197203697.5
[2025-07-27 10:07:31] 2025-07-27 14:06:59,458 | INFO     | sum of deviations: -21298460337.499996
[2025-07-27 10:07:31] 2025-07-27 14:06:59,458 | INFO     | mean x: 1753622440.5
[2025-07-27 10:07:31] 2025-07-27 14:06:59,458 | INFO     | mean y: 2845936.6860465114
[2025-07-27 10:07:31] 2025-07-27 14:06:59,458 | INFO     | -- intersect: 189398168993.13733
[2025-07-27 10:07:31] 2025-07-27 14:06:59,458 | INFO     | intersect: 189398168993.13733
[2025-07-27 10:07:31] 2025-07-27 14:06:59,458 | INFO     | chi2: 0.12863406703180996
[2025-07-27 10:07:31] 2025-07-27 14:06:59,458 | INFO     | -- intersect: 189398168993.13733
[2025-07-27 10:07:31] 2025-07-27 14:06:59,459 | INFO     | current memory leak: -108.00 B/s (using 86 data points, chi2=0.13)
[2025-07-27 10:07:31] 2025-07-27 14:06:59,459 | INFO     | could have reported an average CPU frequency of 2600 MHz (7 samples)
[2025-07-27 10:07:31] 2025-07-27 14:06:59,459 | INFO     | ..............................
[2025-07-27 10:07:31] 2025-07-27 14:06:59,459 | INFO     | . Timing measurements:
[2025-07-27 10:07:31] 2025-07-27 14:06:59,460 | INFO     | . get job = 0 s
[2025-07-27 10:07:31] 2025-07-27 14:06:59,460 | INFO     | . initial setup = 2 s
[2025-07-27 10:07:31] 2025-07-27 14:06:59,460 | INFO     | . payload setup = 7 s
[2025-07-27 10:07:31] 2025-07-27 14:06:59,460 | INFO     | . stage-in = 0 s
[2025-07-27 10:07:31] 2025-07-27 14:06:59,460 | INFO     | . payload execution = 5666 s
[2025-07-27 10:07:31] 2025-07-27 14:06:59,460 | INFO     | . stage-out = 0 s
[2025-07-27 10:07:31] 2025-07-27 14:06:59,460 | INFO     | . log creation = 0 s
[2025-07-27 10:07:31] 2025-07-27 14:06:59,460 | INFO     | ..............................
[2025-07-27 10:07:31] 2025-07-27 14:06:59,551 | INFO     | 
[2025-07-27 10:07:31] 2025-07-27 14:06:59,551 | INFO     | job summary report
[2025-07-27 10:07:31] 2025-07-27 14:06:59,551 | INFO     | --------------------------------------------------
[2025-07-27 10:07:31] 2025-07-27 14:06:59,551 | INFO     | PanDA job id: 6746303390
[2025-07-27 10:07:31] 2025-07-27 14:06:59,551 | INFO     | task id: 45743349
[2025-07-27 10:07:31] 2025-07-27 14:06:59,551 | INFO     | errors: (none)
[2025-07-27 10:07:31] 2025-07-27 14:06:59,551 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 10:07:31] 2025-07-27 14:06:59,552 | INFO     | pilot state: finished 
[2025-07-27 10:07:31] 2025-07-27 14:06:59,552 | INFO     | transexitcode: 0
[2025-07-27 10:07:31] 2025-07-27 14:06:59,552 | INFO     | exeerrorcode: 0
[2025-07-27 10:07:31] 2025-07-27 14:06:59,552 | INFO     | exeerrordiag: 
[2025-07-27 10:07:31] 2025-07-27 14:06:59,552 | INFO     | exitcode: 0
[2025-07-27 10:07:31] 2025-07-27 14:06:59,552 | INFO     | exitmsg: OK
[2025-07-27 10:07:31] 2025-07-27 14:06:59,552 | INFO     | cpuconsumptiontime: 52468 s
[2025-07-27 10:07:31] 2025-07-27 14:06:59,552 | INFO     | nevents: 400
[2025-07-27 10:07:31] 2025-07-27 14:06:59,552 | INFO     | neventsw: 0
[2025-07-27 10:07:31] 2025-07-27 14:06:59,552 | INFO     | pid: 2373195
[2025-07-27 10:07:31] 2025-07-27 14:06:59,552 | INFO     | pgrp: 2373195
[2025-07-27 10:07:31] 2025-07-27 14:06:59,553 | INFO     | corecount: 10
[2025-07-27 10:07:31] 2025-07-27 14:06:59,553 | INFO     | event service: False
[2025-07-27 10:07:31] 2025-07-27 14:06:59,553 | INFO     | sizes: {0: 2397304, 1: 2397503, 4: 2397765, 11: 2397793, 5677: 2424385, 5678: 2424384, 5680: 2433566, 5683: 2433622, 5688: 2433816}
[2025-07-27 10:07:31] 2025-07-27 14:06:59,553 | INFO     | --------------------------------------------------
[2025-07-27 10:07:31] 2025-07-27 14:06:59,553 | INFO     | 
[2025-07-27 10:07:31] 2025-07-27 14:06:59,553 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 10:07:31] 2025-07-27 14:06:59,573 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,573 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,573 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,574 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,575 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,575 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 10:07:31] 2025-07-27 14:06:59,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,575 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 10:07:31] 2025-07-27 14:06:59,575 | INFO     | job 6746303390 has completed (purged errors)
[2025-07-27 10:07:31] 2025-07-27 14:06:59,575 | INFO     | overall cleanup function is called
[2025-07-27 10:07:31] 2025-07-27 14:07:00,584 | INFO     | --- collectZombieJob: --- 10, [2373195]
[2025-07-27 10:07:31] 2025-07-27 14:07:00,584 | INFO     | zombie collector waiting for pid 2373195
[2025-07-27 10:07:31] 2025-07-27 14:07:00,584 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 10:07:31] 2025-07-27 14:07:00,584 | INFO     | collected zombie processes
[2025-07-27 10:07:31] 2025-07-27 14:07:00,584 | INFO     | will attempt to kill all subprocesses of pid=2373195
[2025-07-27 10:07:31] 2025-07-27 14:07:00,779 | INFO     | process IDs to be killed: [2373195] (in reverse order)
[2025-07-27 10:07:31] 2025-07-27 14:07:00,845 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 10:07:31] 2025-07-27 14:07:00,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 10:07:31] 2025-07-27 14:07:00,852 | INFO     | did not find any defunct processes belonging to 2373195
[2025-07-27 10:07:31] 2025-07-27 14:07:00,859 | INFO     | did not find any defunct processes belonging to 2373195
[2025-07-27 10:07:31] 2025-07-27 14:07:00,859 | INFO     | ready for new job
[2025-07-27 10:07:31] 2025-07-27 14:07:00,859 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 10:07:31] 2025-07-27 14:07:00,861 | INFO     | ***************************************
[2025-07-27 10:07:31] 2025-07-27 14:07:00,861 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 10:07:31] 2025-07-27 14:07:00,861 | INFO     | ***************************************
[2025-07-27 10:07:31] 2025-07-27 14:07:00,861 | INFO     | 
[2025-07-27 10:07:31] 2025-07-27 14:07:00,863 | INFO     | architecture information:
[2025-07-27 10:07:31] 2025-07-27 14:07:00,863 | INFO     | executing command: cat /etc/os-release
[2025-07-27 10:07:31] 2025-07-27 14:07:00,880 | INFO     | cat /etc/os-release:
[2025-07-27 10:07:31] NAME="CentOS Linux"
[2025-07-27 10:07:31] VERSION="7 (Core)"
[2025-07-27 10:07:31] ID="centos"
[2025-07-27 10:07:31] ID_LIKE="rhel fedora"
[2025-07-27 10:07:31] VERSION_ID="7"
[2025-07-27 10:07:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 10:07:31] ANSI_COLOR="0;31"
[2025-07-27 10:07:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 10:07:31] HOME_URL="https://www.centos.org/"
[2025-07-27 10:07:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 10:07:31] 
[2025-07-27 10:07:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 10:07:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 10:07:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 10:07:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 10:07:31] 
[2025-07-27 10:07:31] 2025-07-27 14:07:00,880 | INFO     | ***************************************
[2025-07-27 10:07:31] 2025-07-27 14:07:01,383 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 10:07:31] 2025-07-27 14:07:01,405 | INFO     | sufficient remaining disk space (53989081088 B)
[2025-07-27 10:07:31] 2025-07-27 14:07:01,405 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 10:07:31] 2025-07-27 14:07:01,405 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 10:07:31] 2025-07-27 14:07:01,405 | INFO     | update_server=False
[2025-07-27 10:07:31] 2025-07-27 14:07:01,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 10:07:31] 2025-07-27 14:07:01,406 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:07:31] 2025-07-27 14:07:01,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:07:31] 2025-07-27 14:07:01,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 10:07:31] 2025-07-27 14:07:01,406 | INFO     | aborting loop
[2025-07-27 10:07:31] 2025-07-27 14:07:01,736 | INFO     | all payload control threads have been joined
[2025-07-27 10:07:31] 2025-07-27 14:07:01,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 10:07:31] 2025-07-27 14:07:02,065 | INFO     | all data control threads have been joined
[2025-07-27 10:07:31] 2025-07-27 14:07:02,412 | INFO     | [job] retrieve thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:02,412 | INFO     | [job] queue monitor thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:02,412 | INFO     | [job] job monitor thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:02,589 | INFO     | [job] validate thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:02,671 | INFO     | [data] copytool_in thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:02,741 | INFO     | [payload] control thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:02,772 | INFO     | all job control threads have been joined
[2025-07-27 10:07:31] 2025-07-27 14:07:02,936 | INFO     | [payload] validate_post thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:02,965 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:03,070 | INFO     | [data] control thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:03,123 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:03,151 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:03,705 | INFO     | [payload] failed_post thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:03,777 | INFO     | [job] control thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:03,778 | INFO     | [data] copytool_out thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:03,845 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:05,412 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 10:07:31] 2025-07-27 14:07:05,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140604727715648)>', '<ExcThread(monitor, started 140604226901760)>']
[2025-07-27 10:07:31] 2025-07-27 14:07:11,023 | INFO     | all workflow threads have been joined
[2025-07-27 10:07:31] 2025-07-27 14:07:11,023 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 10:07:31] 2025-07-27 14:07:11,023 | INFO     | traces error code: 0
[2025-07-27 10:07:31] 2025-07-27 14:07:11,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 10:07:31] 2025-07-27 14:07:31,490 | INFO     | PID=2366794 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 10:07:31] 2025-07-27 14:07:31,491 | INFO     | .. there are 6 such processes running
[2025-07-27 10:07:31] 2025-07-27 14:07:31,491 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 10:07:31] 2025-07-27 14:07:31,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 10:07:31] 2025-07-27 14:07:31,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 10:07:31] 2025-07-27 14:07:31,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 10:07:31] 2025-07-27 14:07:31,491 | INFO     | [monitor] control thread has ended
[2025-07-27 10:07:31] 2025-07-27 14:07:31,651 [wrapper] ==== pilot stdout END ====
[2025-07-27 10:07:31] 2025-07-27 14:07:31,655 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 10:07:31] 2025-07-27 14:07:31,660 [wrapper] pilotpid: 2366794
[2025-07-27 10:07:31] 2025-07-27 14:07:31,665 [wrapper] Pilot exit status: 0
[2025-07-27 10:07:31] 2025-07-27 14:07:31,681 [wrapper] pandaids: 6746303390
[2025-07-27 10:07:31] 2025-07-27 14:07:31,734 [wrapper] cleanup supervisor_pilot 2482456 2366795
[2025-07-27 10:07:31] 2025-07-27 14:07:31,738 [wrapper] Test setup, not cleaning
[2025-07-27 10:07:31] 2025-07-27 14:07:31,742 [wrapper] apfmon messages muted
[2025-07-27 10:07:31] 2025-07-27 14:07:31,746 [wrapper] ==== wrapper stdout END ====
[2025-07-27 10:07:31] 2025-07-27 14:07:31,749 [wrapper] ==== wrapper stderr END ====
[2025-07-27 10:07:31]  *** Error codes and diagnostics ***
[2025-07-27 10:07:31]     "exeErrorCode": 0,
[2025-07-27 10:07:31]     "exeErrorDiag": "",
[2025-07-27 10:07:31]     "pilotErrorCode": 0,
[2025-07-27 10:07:31]     "pilotErrorDiag": "",
[2025-07-27 10:07:31]  *** Listing of results directory ***
[2025-07-27 10:07:31] total 355532
[2025-07-27 10:07:31] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 02:49 pilot3.tar.gz
[2025-07-27 10:07:31] -rwx------. 1 boincer umatlas     36292 Jul 27 02:53 runpilot2-wrapper.sh
[2025-07-27 10:07:31] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 02:53 queuedata.json
[2025-07-27 10:07:31] -rw-r--r--. 1 boincer umatlas       100 Jul 27 08:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 10:07:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 08:31 run_atlas
[2025-07-27 10:07:31] -rw-r--r--. 1 boincer umatlas       105 Jul 27 08:31 job.xml
[2025-07-27 10:07:31] -rw-r--r--. 2 boincer umatlas 150601040 Jul 27 08:31 EVNT.45743347._002595.pool.root.1
[2025-07-27 10:07:31] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 08:31 start_atlas.sh
[2025-07-27 10:07:31] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 08:31 shared
[2025-07-27 10:07:31] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 08:31 input.tar.gz
[2025-07-27 10:07:31] -rw-r--r--. 1 boincer umatlas         0 Jul 27 08:31 boinc_lockfile
[2025-07-27 10:07:31] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 08:31 pandaJob.out
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas    980117 Jul 27 08:31 agis_schedconf.cvmfs.json
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas   1593052 Jul 27 08:31 agis_ddmendpoints.agis.ALL.json
[2025-07-27 10:07:31] drwx------. 4 boincer umatlas      4096 Jul 27 08:31 pilot3
[2025-07-27 10:07:31] -rw-r--r--. 1 boincer umatlas      6657 Jul 27 10:01 init_data.xml
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas 207789046 Jul 27 10:06 HITS.45743349._045974.pool.root.1
[2025-07-27 10:07:31] -rw-r--r--. 1 boincer umatlas       529 Jul 27 10:06 boinc_task_state.xml
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas        95 Jul 27 10:06 pilot_heartbeat.json
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas      1038 Jul 27 10:06 memory_monitor_summary.json
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas    343534 Jul 27 10:06 log.45743349._045974.job.log.tgz.1
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas      7827 Jul 27 10:06 heartbeat.json
[2025-07-27 10:07:31] -rw-r--r--. 1 boincer umatlas        27 Jul 27 10:07 wrapper_checkpoint.txt
[2025-07-27 10:07:31] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 10:07 boinc_mmap_file
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas       822 Jul 27 10:07 pilotlog.txt
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas    557508 Jul 27 10:07 log.45743349._045974.job.log.1
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas       357 Jul 27 10:07 output.list
[2025-07-27 10:07:31] -rw-r--r--. 1 boincer umatlas       620 Jul 27 10:07 runtime_log
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas    921600 Jul 27 10:07 result.tar.gz
[2025-07-27 10:07:31] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 10:07 runtime_log.err
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas       653 Jul 27 10:07 GWFMDmtQA07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyYULDm9fU6fn.diag
[2025-07-27 10:07:31] -rw-r--r--. 1 boincer umatlas     21640 Jul 27 10:07 stderr.txt
[2025-07-27 10:07:31] HITS file was successfully produced:
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas 207789046 Jul 27 10:06 shared/HITS.pool.root.1
[2025-07-27 10:07:31]  *** Contents of shared directory: ***
[2025-07-27 10:07:31] total 351444
[2025-07-27 10:07:31] -rw-r--r--. 2 boincer umatlas 150601040 Jul 27 08:31 ATLAS.root_0
[2025-07-27 10:07:31] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 08:31 start_atlas.sh
[2025-07-27 10:07:31] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 08:31 input.tar.gz
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas 207789046 Jul 27 10:06 HITS.pool.root.1
[2025-07-27 10:07:31] -rw-------. 1 boincer umatlas    921600 Jul 27 10:07 result.tar.gz
10:07:33 (2363174): run_atlas exited; CPU time 52562.002070
10:07:33 (2363174): called boinc_finish(0)

</stderr_txt>
]]>

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