Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:53:19 (2356380): wrapper (7.7.26015): starting
03:53:19 (2356380): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 03:53:19] Arguments: --nthreads 4
[2025-07-28 03:53:19] Threads: 4
[2025-07-28 03:53:19] Checking for CVMFS
[2025-07-28 03:53:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 03:53:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 03:53:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 03:53:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 03:53:19] 2.9.2.0 844761 4900 93260 148830 1 57 36438146 36864000 0 130560 0 3974210 99.991 169822 2176 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 03:53:19] CVMFS is ok
[2025-07-28 03:53:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 03:53:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 03:53:19] Further information can be found at the LHC@home message board.
[2025-07-28 03:53:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 03:53:19] Checking for apptainer binary...
[2025-07-28 03:53:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 03:53:19] Running /usr/bin/apptainer --version
[2025-07-28 03:53:19] apptainer version 1.4.1-1.1
[2025-07-28 03:53:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 03:53:19] thA325
[2025-07-28 03:53:19] apptainer works
[2025-07-28 03:53:19] Set ATHENA_PROC_NUMBER=4
[2025-07-28 03:53:19] Set ATHENA_CORE_NUMBER=4
[2025-07-28 03:53:19] Starting ATLAS job with PandaID=6745983072
[2025-07-28 03:53:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 05:23:25]  *** The last 200 lines of the pilot log: ***
[2025-07-28 05:23:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 05:23:25]  replicas=None
[2025-07-28 05:23:25]  scope=mc23_13p6TeV
[2025-07-28 05:23:25]  status=None
[2025-07-28 05:23:25]  status_code=0
[2025-07-28 05:23:25]  storage_token=
[2025-07-28 05:23:25]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745983072/log.45758894._000033.job.log.tgz.1
[2025-07-28 05:23:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/82/log.45758894._000033.job.log.tgz.1
[2025-07-28 05:23:25]  workdir=None
[2025-07-28 05:23:25] ]
[2025-07-28 05:23:25] 2025-07-28 03:22:45,069 | INFO     | transferring file log.45758894._000033.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745983072/log.45758894._000033.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 05:23:25] 2025-07-28 03:22:45,069 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745983072/log.45758894._000033.job.log.tgz.1 /local/data/boinc/slots/0/log.45758894._0000
[2025-07-28 05:23:25] 2025-07-28 03:22:45,086 | INFO     | adding to output.list: log.45758894._000033.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/82/log.45758894._000033.job.log.tg
[2025-07-28 05:23:25] 2025-07-28 03:22:45,086 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 05:23:25] 2025-07-28 03:22:45,087 | INFO     | summary of transferred files:
[2025-07-28 05:23:25] 2025-07-28 03:22:45,087 | INFO     |  -- lfn=log.45758894._000033.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 05:23:25] 2025-07-28 03:22:45,087 | INFO     | stage-out finished correctly
[2025-07-28 05:23:25] 2025-07-28 03:22:47,004 | WARNING  | process 2366726 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 05:23:25] 2025-07-28 03:22:47,004 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745983072/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 05:23:25] 2025-07-28 03:22:47,043 | INFO     | number of running child processes to parent process 2366726: 1
[2025-07-28 05:23:25] 2025-07-28 03:22:47,043 | INFO     | maximum number of monitored processes: 6
[2025-07-28 05:23:25] 2025-07-28 03:22:47,431 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 05:23:25] 2025-07-28 03:22:48,239 | INFO     | job 6745983072 has state=finished
[2025-07-28 05:23:25] 2025-07-28 03:22:48,239 | INFO     | preparing for final server update for job 6745983072 in state='finished'
[2025-07-28 05:23:25] 2025-07-28 03:22:48,239 | INFO     | this job has now completed (state=finished)
[2025-07-28 05:23:25] 2025-07-28 03:22:48,240 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 05:23:25] 2025-07-28 03:22:48,240 | INFO     | log transfer has been attempted: DONE
[2025-07-28 05:23:25] 2025-07-28 03:22:48,240 | INFO     | job 6745983072 has finished - writing final server update
[2025-07-28 05:23:25] 2025-07-28 03:22:48,240 | INFO     | total number of processed events: 400 (read)
[2025-07-28 05:23:25] 2025-07-28 03:22:48,241 | INFO     | executing command: lscpu
[2025-07-28 05:23:25] 2025-07-28 03:22:48,261 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 05:23:25] 2025-07-28 03:22:49,546 | INFO     | monitor loop #412: job 0:6745983072 is in state 'finished'
[2025-07-28 05:23:25] 2025-07-28 03:22:49,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 05:23:25] 2025-07-28 03:22:52,049 | INFO     | monitor loop #413: job 0:6745983072 is in state 'finished'
[2025-07-28 05:23:25] 2025-07-28 03:22:52,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 05:23:25] 2025-07-28 03:22:52,749 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 05:23:25] 2025-07-28 03:22:52,750 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3198.1139999999996
[2025-07-28 05:23:25] 2025-07-28 03:22:52,752 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745983072/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 05:23:25] 2025-07-28 03:22:52,752 | INFO     | extracted standard info from prmon json
[2025-07-28 05:23:25] 2025-07-28 03:22:52,752 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 05:23:25] 2025-07-28 03:22:52,752 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 05:23:25] 2025-07-28 03:22:52,752 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 05:23:25] 2025-07-28 03:22:52,752 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 05:23:25] 2025-07-28 03:22:52,753 | INFO     | fitting pss+swap vs Time
[2025-07-28 05:23:25] 2025-07-28 03:22:52,753 | INFO     | sum of square deviations: 164765880.0
[2025-07-28 05:23:25] 2025-07-28 03:22:52,753 | INFO     | sum of deviations: -5356423541.999999
[2025-07-28 05:23:25] 2025-07-28 03:22:52,753 | INFO     | mean x: 1753670374.0
[2025-07-28 05:23:25] 2025-07-28 03:22:52,753 | INFO     | mean y: 2446877.6790123456
[2025-07-28 05:23:25] 2025-07-28 03:22:52,753 | INFO     | -- intersect: 57013044437.08599
[2025-07-28 05:23:25] 2025-07-28 03:22:52,753 | INFO     | intersect: 57013044437.08599
[2025-07-28 05:23:25] 2025-07-28 03:22:52,754 | INFO     | chi2: 0.1268608910202191
[2025-07-28 05:23:25] 2025-07-28 03:22:52,754 | INFO     | -- intersect: 57013044437.08599
[2025-07-28 05:23:25] 2025-07-28 03:22:52,754 | INFO     | current memory leak: -32.51 B/s (using 81 data points, chi2=0.13)
[2025-07-28 05:23:25] 2025-07-28 03:22:52,754 | INFO     | could have reported an average CPU frequency of 3695 MHz (6 samples)
[2025-07-28 05:23:25] 2025-07-28 03:22:52,754 | INFO     | ..............................
[2025-07-28 05:23:25] 2025-07-28 03:22:52,754 | INFO     | . Timing measurements:
[2025-07-28 05:23:25] 2025-07-28 03:22:52,754 | INFO     | . get job = 0 s
[2025-07-28 05:23:25] 2025-07-28 03:22:52,754 | INFO     | . initial setup = 1 s
[2025-07-28 05:23:25] 2025-07-28 03:22:52,754 | INFO     | . payload setup = 4 s
[2025-07-28 05:23:25] 2025-07-28 03:22:52,754 | INFO     | . stage-in = 0 s
[2025-07-28 05:23:25] 2025-07-28 03:22:52,754 | INFO     | . payload execution = 5335 s
[2025-07-28 05:23:25] 2025-07-28 03:22:52,754 | INFO     | . stage-out = 0 s
[2025-07-28 05:23:25] 2025-07-28 03:22:52,754 | INFO     | . log creation = 0 s
[2025-07-28 05:23:25] 2025-07-28 03:22:52,754 | INFO     | ..............................
[2025-07-28 05:23:25] 2025-07-28 03:22:52,883 | INFO     | 
[2025-07-28 05:23:25] 2025-07-28 03:22:52,883 | INFO     | job summary report
[2025-07-28 05:23:25] 2025-07-28 03:22:52,883 | INFO     | --------------------------------------------------
[2025-07-28 05:23:25] 2025-07-28 03:22:52,883 | INFO     | PanDA job id: 6745983072
[2025-07-28 05:23:25] 2025-07-28 03:22:52,883 | INFO     | task id: 45758894
[2025-07-28 05:23:25] 2025-07-28 03:22:52,883 | INFO     | errors: (none)
[2025-07-28 05:23:25] 2025-07-28 03:22:52,883 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 05:23:25] 2025-07-28 03:22:52,883 | INFO     | pilot state: finished 
[2025-07-28 05:23:25] 2025-07-28 03:22:52,883 | INFO     | transexitcode: 0
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | exeerrorcode: 0
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | exeerrordiag: 
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | exitcode: 0
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | exitmsg: OK
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | cpuconsumptiontime: 20406 s
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | nevents: 400
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | neventsw: 0
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | pid: 2366726
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | pgrp: 2366726
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | corecount: 4
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | event service: False
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | sizes: {0: 2397285, 1: 2397484, 4: 2397746, 11: 2397774, 5344: 2424416, 5345: 2433420, 5347: 2433604, 5352: 2433798}
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | --------------------------------------------------
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | 
[2025-07-28 05:23:25] 2025-07-28 03:22:52,884 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 05:23:25] 2025-07-28 03:22:52,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,904 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,904 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,904 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,905 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 05:23:25] 2025-07-28 03:22:52,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,905 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 05:23:25] 2025-07-28 03:22:52,905 | INFO     | job 6745983072 has completed (purged errors)
[2025-07-28 05:23:25] 2025-07-28 03:22:52,905 | INFO     | overall cleanup function is called
[2025-07-28 05:23:25] 2025-07-28 03:22:53,911 | INFO     | --- collectZombieJob: --- 10, [2366726]
[2025-07-28 05:23:25] 2025-07-28 03:22:53,911 | INFO     | zombie collector waiting for pid 2366726
[2025-07-28 05:23:25] 2025-07-28 03:22:53,911 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 05:23:25] 2025-07-28 03:22:53,911 | INFO     | collected zombie processes
[2025-07-28 05:23:25] 2025-07-28 03:22:53,912 | INFO     | will attempt to kill all subprocesses of pid=2366726
[2025-07-28 05:23:25] 2025-07-28 03:22:53,952 | INFO     | process IDs to be killed: [2366726] (in reverse order)
[2025-07-28 05:23:25] 2025-07-28 03:22:53,983 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 05:23:25] 2025-07-28 03:22:53,984 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 05:23:25] 2025-07-28 03:22:53,985 | INFO     | did not find any defunct processes belonging to 2366726
[2025-07-28 05:23:25] 2025-07-28 03:22:53,986 | INFO     | did not find any defunct processes belonging to 2366726
[2025-07-28 05:23:25] 2025-07-28 03:22:53,987 | INFO     | ready for new job
[2025-07-28 05:23:25] 2025-07-28 03:22:53,987 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 05:23:25] 2025-07-28 03:22:53,987 | INFO     | ***************************************
[2025-07-28 05:23:25] 2025-07-28 03:22:53,987 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 05:23:25] 2025-07-28 03:22:53,987 | INFO     | ***************************************
[2025-07-28 05:23:25] 2025-07-28 03:22:53,987 | INFO     | 
[2025-07-28 05:23:25] 2025-07-28 03:22:53,988 | INFO     | architecture information:
[2025-07-28 05:23:25] 2025-07-28 03:22:53,988 | INFO     | executing command: cat /etc/os-release
[2025-07-28 05:23:25] 2025-07-28 03:22:54,001 | INFO     | cat /etc/os-release:
[2025-07-28 05:23:25] NAME="CentOS Linux"
[2025-07-28 05:23:25] VERSION="7 (Core)"
[2025-07-28 05:23:25] ID="centos"
[2025-07-28 05:23:25] ID_LIKE="rhel fedora"
[2025-07-28 05:23:25] VERSION_ID="7"
[2025-07-28 05:23:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 05:23:25] ANSI_COLOR="0;31"
[2025-07-28 05:23:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 05:23:25] HOME_URL="https://www.centos.org/"
[2025-07-28 05:23:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 05:23:25] 
[2025-07-28 05:23:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 05:23:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 05:23:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 05:23:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 05:23:25] 
[2025-07-28 05:23:25] 2025-07-28 03:22:54,001 | INFO     | ***************************************
[2025-07-28 05:23:25] 2025-07-28 03:22:54,504 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 05:23:25] 2025-07-28 03:22:54,522 | INFO     | sufficient remaining disk space (218225442816 B)
[2025-07-28 05:23:25] 2025-07-28 03:22:54,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 05:23:25] 2025-07-28 03:22:54,522 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 05:23:25] 2025-07-28 03:22:54,522 | INFO     | update_server=False
[2025-07-28 05:23:25] 2025-07-28 03:22:54,522 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 05:23:25] 2025-07-28 03:22:54,522 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 05:23:25] 2025-07-28 03:22:54,553 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 05:23:25] 2025-07-28 03:22:54,553 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 05:23:25] 2025-07-28 03:22:54,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 05:23:25] 2025-07-28 03:22:54,554 | INFO     | will abort loop
[2025-07-28 05:23:25] 2025-07-28 03:22:54,685 | INFO     | all data control threads have been joined
[2025-07-28 05:23:25] 2025-07-28 03:22:55,202 | INFO     | all payload control threads have been joined
[2025-07-28 05:23:25] 2025-07-28 03:22:55,431 | INFO     | all job control threads have been joined
[2025-07-28 05:23:25] 2025-07-28 03:22:55,528 | INFO     | [job] retrieve thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:22:55,528 | INFO     | [job] queue monitor thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:22:55,548 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:22:55,559 | INFO     | [job] job monitor thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:22:55,614 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:22:55,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 05:23:25] 2025-07-28 03:22:55,691 | INFO     | [data] control thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:22:55,882 | INFO     | [data] copytool_in thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:22:56,070 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:22:56,208 | INFO     | [payload] control thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:22:56,437 | INFO     | [job] control thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:22:56,498 | INFO     | [payload] failed_post thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:22:56,936 | INFO     | [job] validate thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:22:56,963 | INFO     | [payload] validate_post thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:22:57,649 | INFO     | [data] copytool_out thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:22:57,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 05:23:25] 2025-07-28 03:23:01,993 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:23:05,484 | INFO     | job.realtimelogging is not enabled
[2025-07-28 05:23:25] 2025-07-28 03:23:06,490 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 05:23:25] 2025-07-28 03:23:06,577 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662368573248)>', '<ExcThread(monitor, started 140661412046592)>']
[2025-07-28 05:23:25] 2025-07-28 03:23:11,603 | INFO     | all workflow threads have been joined
[2025-07-28 05:23:25] 2025-07-28 03:23:11,603 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 05:23:25] 2025-07-28 03:23:11,603 | INFO     | traces error code: 0
[2025-07-28 05:23:25] 2025-07-28 03:23:11,603 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 05:23:25] 2025-07-28 03:23:25,126 | INFO     | PID=2360101 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 05:23:25] 2025-07-28 03:23:25,126 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 05:23:25] 2025-07-28 03:23:25,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 05:23:25] 2025-07-28 03:23:25,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 05:23:25] 2025-07-28 03:23:25,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 05:23:25] 2025-07-28 03:23:25,126 | INFO     | [monitor] control thread has ended
[2025-07-28 05:23:25] 2025-07-28 03:23:25,190 [wrapper] ==== pilot stdout END ====
[2025-07-28 05:23:25] 2025-07-28 03:23:25,194 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 05:23:25] 2025-07-28 03:23:25,198 [wrapper] pilotpid: 2360101
[2025-07-28 05:23:25] 2025-07-28 03:23:25,202 [wrapper] Pilot exit status: 0
[2025-07-28 05:23:25] 2025-07-28 03:23:25,212 [wrapper] pandaids: 6745983072
[2025-07-28 05:23:25] 2025-07-28 03:23:25,232 [wrapper] cleanup supervisor_pilot 2379257 2360102
[2025-07-28 05:23:25] 2025-07-28 03:23:25,236 [wrapper] Test setup, not cleaning
[2025-07-28 05:23:25] 2025-07-28 03:23:25,240 [wrapper] apfmon messages muted
[2025-07-28 05:23:25] 2025-07-28 03:23:25,243 [wrapper] ==== wrapper stdout END ====
[2025-07-28 05:23:25] 2025-07-28 03:23:25,247 [wrapper] ==== wrapper stderr END ====
[2025-07-28 05:23:25]  *** Error codes and diagnostics ***
[2025-07-28 05:23:25]     "exeErrorCode": 0,
[2025-07-28 05:23:25]     "exeErrorDiag": "",
[2025-07-28 05:23:25]     "pilotErrorCode": 0,
[2025-07-28 05:23:25]     "pilotErrorDiag": "",
[2025-07-28 05:23:25]  *** Listing of results directory ***
[2025-07-28 05:23:25] total 408964
[2025-07-28 05:23:25] -rw-r--r-- 1 boinc boinc    530466 Jul 27 05:36 pilot3.tar.gz
[2025-07-28 05:23:25] -rwx------ 1 boinc boinc     36292 Jul 27 06:14 runpilot2-wrapper.sh
[2025-07-28 05:23:25] -rw-r--r-- 1 boinc boinc      5112 Jul 27 06:14 queuedata.json
[2025-07-28 05:23:25] -rw-r--r-- 1 boinc boinc       100 Jul 28 03:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 05:23:25] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 03:53 run_atlas
[2025-07-28 05:23:25] -rw-r--r-- 1 boinc boinc       105 Jul 28 03:53 job.xml
[2025-07-28 05:23:25] -rw-r--r-- 2 boinc boinc 237579547 Jul 28 03:53 EVNT.45758892._000002.pool.root.1
[2025-07-28 05:23:25] -rw-r--r-- 2 boinc boinc    542876 Jul 28 03:53 input.tar.gz
[2025-07-28 05:23:25] -rw-r--r-- 2 boinc boinc     15095 Jul 28 03:53 start_atlas.sh
[2025-07-28 05:23:25] drwxrwx--x 2 boinc boinc      4096 Jul 28 03:53 shared
[2025-07-28 05:23:25] -rw-r--r-- 1 boinc boinc         0 Jul 28 03:53 boinc_setup_complete
[2025-07-28 05:23:25] -rw-r--r-- 1 boinc boinc      6372 Jul 28 03:53 init_data.xml
[2025-07-28 05:23:25] -rw-r--r-- 1 boinc boinc         0 Jul 28 03:53 boinc_lockfile
[2025-07-28 05:23:25] -rw-r--r-- 1 boinc boinc      2546 Jul 28 03:53 pandaJob.out
[2025-07-28 05:23:25] -rw------- 1 boinc boinc    980125 Jul 28 03:53 agis_schedconf.cvmfs.json
[2025-07-28 05:23:25] -rw------- 1 boinc boinc   1593052 Jul 28 03:53 agis_ddmendpoints.agis.ALL.json
[2025-07-28 05:23:25] drwx------ 4 boinc boinc      4096 Jul 28 03:53 pilot3
[2025-07-28 05:23:25] -rw------- 1 boinc boinc 175804316 Jul 28 05:22 HITS.45758894._000033.pool.root.1
[2025-07-28 05:23:25] -rw-r--r-- 1 boinc boinc       530 Jul 28 05:22 boinc_task_state.xml
[2025-07-28 05:23:25] -rw------- 1 boinc boinc      1022 Jul 28 05:22 memory_monitor_summary.json
[2025-07-28 05:23:25] -rw------- 1 boinc boinc    243836 Jul 28 05:22 log.45758894._000033.job.log.tgz.1
[2025-07-28 05:23:25] -rw------- 1 boinc boinc      7745 Jul 28 05:22 heartbeat.json
[2025-07-28 05:23:25] -rw-r--r-- 1 boinc boinc        27 Jul 28 05:23 wrapper_checkpoint.txt
[2025-07-28 05:23:25] -rw-r--r-- 1 boinc boinc      8192 Jul 28 05:23 boinc_mmap_file
[2025-07-28 05:23:25] -rw------- 1 boinc boinc       747 Jul 28 05:23 pilotlog.txt
[2025-07-28 05:23:25] -rw------- 1 boinc boinc        95 Jul 28 05:23 pilot_heartbeat.json
[2025-07-28 05:23:25] -rw------- 1 boinc boinc    517149 Jul 28 05:23 log.45758894._000033.job.log.1
[2025-07-28 05:23:25] -rw------- 1 boinc boinc       357 Jul 28 05:23 output.list
[2025-07-28 05:23:25] -rw-r--r-- 1 boinc boinc       620 Jul 28 05:23 runtime_log
[2025-07-28 05:23:25] -rw------- 1 boinc boinc    778240 Jul 28 05:23 result.tar.gz
[2025-07-28 05:23:25] -rw-r--r-- 1 boinc boinc      8734 Jul 28 05:23 runtime_log.err
[2025-07-28 05:23:25] -rw------- 1 boinc boinc       658 Jul 28 05:23 LHNKDmnx7z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmut1KDmSRjzwm.diag
[2025-07-28 05:23:25] -rw-r--r-- 1 boinc boinc     21912 Jul 28 05:23 stderr.txt
[2025-07-28 05:23:25] HITS file was successfully produced:
[2025-07-28 05:23:25] -rw------- 1 boinc boinc 175804316 Jul 28 05:22 shared/HITS.pool.root.1
[2025-07-28 05:23:25]  *** Contents of shared directory: ***
[2025-07-28 05:23:25] total 405012
[2025-07-28 05:23:25] -rw-r--r-- 2 boinc boinc 237579547 Jul 28 03:53 ATLAS.root_0
[2025-07-28 05:23:25] -rw-r--r-- 2 boinc boinc    542876 Jul 28 03:53 input.tar.gz
[2025-07-28 05:23:25] -rw-r--r-- 2 boinc boinc     15095 Jul 28 03:53 start_atlas.sh
[2025-07-28 05:23:25] -rw------- 1 boinc boinc 175804316 Jul 28 05:22 HITS.pool.root.1
[2025-07-28 05:23:25] -rw------- 1 boinc boinc    778240 Jul 28 05:23 result.tar.gz
05:23:26 (2356380): run_atlas exited; CPU time 20425.219897
05:23:26 (2356380): called boinc_finish(0)

</stderr_txt>
]]>

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