Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:44:38 (1243): wrapper (7.7.26015): starting
07:44:38 (1243): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 07:44:38] Arguments: --nthreads 8
[2025-07-27 07:44:38] Threads: 8
[2025-07-27 07:44:38] Checking for CVMFS
[2025-07-27 07:44:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 07:44:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 07:44:38] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 07:44:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 07:44:38] 2.11.2.0 2923 94921 77388 148811 2 57 15797706 20275200 1 130560 0 25764468 99.957 7220636 8129 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 07:44:38] CVMFS is ok
[2025-07-27 07:44:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 07:44:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 07:44:38] Further information can be found at the LHC@home message board.
[2025-07-27 07:44:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 07:44:38] Checking for apptainer binary...
[2025-07-27 07:44:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 07:44:38] Running /usr/bin/apptainer --version
[2025-07-27 07:44:38] apptainer version 1.3.2-1.el7
[2025-07-27 07:44:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 07:44:40] c-204-28.aglt2.org
[2025-07-27 07:44:40] apptainer works
[2025-07-27 07:44:40] Set ATHENA_PROC_NUMBER=8
[2025-07-27 07:44:40] Set ATHENA_CORE_NUMBER=8
[2025-07-27 07:44:40] Starting ATLAS job with PandaID=6746238679
[2025-07-27 07:44:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:46:57 (27693): wrapper (7.7.26015): starting
09:46:57 (27693): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 09:46:57] Arguments: --nthreads 8
[2025-07-27 09:46:57] Threads: 8
[2025-07-27 09:46:57] This job has been restarted, cleaning up previous attempt
[2025-07-27 09:46:58] Checking for CVMFS
[2025-07-27 09:46:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 09:46:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 09:46:58] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 09:46:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 09:46:58] 2.11.2.0 2923 95043 79140 148813 0 16 15804982 20275200 1 130560 0 25844145 99.957 7223318 8131 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 09:46:58] CVMFS is ok
[2025-07-27 09:46:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 09:46:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 09:46:58] Further information can be found at the LHC@home message board.
[2025-07-27 09:46:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 09:46:58] Checking for apptainer binary...
[2025-07-27 09:46:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 09:46:58] Running /usr/bin/apptainer --version
[2025-07-27 09:46:58] apptainer version 1.3.2-1.el7
[2025-07-27 09:46:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 09:46:59] c-204-28.aglt2.org
[2025-07-27 09:46:59] apptainer works
[2025-07-27 09:46:59] Set ATHENA_PROC_NUMBER=8
[2025-07-27 09:46:59] Set ATHENA_CORE_NUMBER=8
[2025-07-27 09:46:59] Starting ATLAS job with PandaID=6746238679
[2025-07-27 09:46:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 12:09:57]  *** The last 200 lines of the pilot log: ***
[2025-07-27 12:09:57] 2025-07-27 16:09:25,855 | INFO     | extracted standard info from prmon json
[2025-07-27 12:09:57] 2025-07-27 16:09:25,855 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 12:09:57] 2025-07-27 16:09:25,856 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:09:57] 2025-07-27 16:09:25,856 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:09:57] 2025-07-27 16:09:25,856 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:09:57] 2025-07-27 16:09:25,860 | INFO     | fitting pss+swap vs Time
[2025-07-27 12:09:57] 2025-07-27 16:09:25,861 | INFO     | sum of square deviations: 850825255.0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,861 | INFO     | sum of deviations: 2579520999.500002
[2025-07-27 12:09:57] 2025-07-27 16:09:25,862 | INFO     | mean x: 1753628307.5
[2025-07-27 12:09:57] 2025-07-27 16:09:25,862 | INFO     | mean y: 2470931.6071428573
[2025-07-27 12:09:57] 2025-07-27 16:09:25,862 | INFO     | -- intersect: -5314156681.326017
[2025-07-27 12:09:57] 2025-07-27 16:09:25,862 | INFO     | intersect: -5314156681.326017
[2025-07-27 12:09:57] 2025-07-27 16:09:25,862 | INFO     | chi2: 2.2191191703492343
[2025-07-27 12:09:57] 2025-07-27 16:09:25,863 | INFO     | sum of square deviations: 762879420.0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,863 | INFO     | sum of deviations: 11532348656.0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,863 | INFO     | mean x: 1753628155.0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,863 | INFO     | mean y: 2485994.6074074074
[2025-07-27 12:09:57] 2025-07-27 16:09:25,864 | INFO     | -- intersect: -26506882021.163696
[2025-07-27 12:09:57] 2025-07-27 16:09:25,864 | INFO     | intersect: -26506882021.163696
[2025-07-27 12:09:57] 2025-07-27 16:09:25,864 | INFO     | chi2: 1.4562330168185917
[2025-07-27 12:09:57] 2025-07-27 16:09:25,864 | INFO     | current chi2=1.4562330168185917 (change=34.377881265862044 %)
[2025-07-27 12:09:57] 2025-07-27 16:09:25,864 | INFO     | sum of square deviations: 681212772.5
[2025-07-27 12:09:57] 2025-07-27 16:09:25,865 | INFO     | sum of deviations: 11105479500.999996
[2025-07-27 12:09:57] 2025-07-27 16:09:25,865 | INFO     | mean x: 1753628002.5
[2025-07-27 12:09:57] 2025-07-27 16:09:25,865 | INFO     | mean y: 2485197.0923076924
[2025-07-27 12:09:57] 2025-07-27 16:09:25,865 | INFO     | -- intersect: -28586056621.746418
[2025-07-27 12:09:57] 2025-07-27 16:09:25,865 | INFO     | intersect: -28586056621.746418
[2025-07-27 12:09:57] 2025-07-27 16:09:25,866 | INFO     | chi2: 1.4582586761866638
[2025-07-27 12:09:57] 2025-07-27 16:09:25,866 | INFO     | current chi2=1.4582586761866638 (change=-0.13910269473888942 %)
[2025-07-27 12:09:57] 2025-07-27 16:09:25,866 | INFO     | right removable region: 129
[2025-07-27 12:09:57] 2025-07-27 16:09:25,866 | INFO     | sum of square deviations: 762879420.0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,867 | INFO     | sum of deviations: -16638371041.0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,867 | INFO     | mean x: 1753628460.0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,867 | INFO     | mean y: 2503660.251851852
[2025-07-27 12:09:57] 2025-07-27 16:09:25,867 | INFO     | -- intersect: 38249073459.627785
[2025-07-27 12:09:57] 2025-07-27 16:09:25,867 | INFO     | intersect: 38249073459.627785
[2025-07-27 12:09:57] 2025-07-27 16:09:25,868 | INFO     | chi2: 0.886652945835074
[2025-07-27 12:09:57] 2025-07-27 16:09:25,868 | INFO     | current chi2=0.886652945835074 (change=60.04482509627742 %)
[2025-07-27 12:09:57] 2025-07-27 16:09:25,868 | INFO     | sum of square deviations: 681212772.5
[2025-07-27 12:09:57] 2025-07-27 16:09:25,869 | INFO     | sum of deviations: -16000591885.000002
[2025-07-27 12:09:57] 2025-07-27 16:09:25,869 | INFO     | mean x: 1753628612.5
[2025-07-27 12:09:57] 2025-07-27 16:09:25,869 | INFO     | mean y: 2502370.4307692307
[2025-07-27 12:09:57] 2025-07-27 16:09:25,869 | INFO     | -- intersect: 41192416710.25814
[2025-07-27 12:09:57] 2025-07-27 16:09:25,869 | INFO     | intersect: 41192416710.25814
[2025-07-27 12:09:57] 2025-07-27 16:09:25,869 | INFO     | chi2: 0.8720743254482546
[2025-07-27 12:09:57] 2025-07-27 16:09:25,870 | INFO     | current chi2=0.8720743254482546 (change=1.6442307506336549 %)
[2025-07-27 12:09:57] 2025-07-27 16:09:25,870 | INFO     | left removable region: 20
[2025-07-27 12:09:57] 2025-07-27 16:09:25,870 | INFO     | sum of square deviations: 401533110.0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,870 | INFO     | sum of deviations: 1590620140.0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,871 | INFO     | mean x: 1753628582.0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,871 | INFO     | mean y: 2499424.981651376
[2025-07-27 12:09:57] 2025-07-27 16:09:25,871 | INFO     | -- intersect: -6944267531.817606
[2025-07-27 12:09:57] 2025-07-27 16:09:25,871 | INFO     | intersect: -6944267531.817606
[2025-07-27 12:09:57] 2025-07-27 16:09:25,871 | INFO     | chi2: 0.0004140030011512969
[2025-07-27 12:09:57] 2025-07-27 16:09:25,871 | INFO     | -- intersect: -6944267531.817606
[2025-07-27 12:09:57] 2025-07-27 16:09:25,871 | INFO     | current memory leak: 3.96 B/s (using 109 data points, chi2=0.00)
[2025-07-27 12:09:57] 2025-07-27 16:09:25,872 | INFO     | could have reported an average CPU frequency of 1989 MHz (8 samples)
[2025-07-27 12:09:57] 2025-07-27 16:09:25,872 | INFO     | ..............................
[2025-07-27 12:09:57] 2025-07-27 16:09:25,872 | INFO     | . Timing measurements:
[2025-07-27 12:09:57] 2025-07-27 16:09:25,872 | INFO     | . get job = 0 s
[2025-07-27 12:09:57] 2025-07-27 16:09:25,872 | INFO     | . initial setup = 1 s
[2025-07-27 12:09:57] 2025-07-27 16:09:25,872 | INFO     | . payload setup = 12 s
[2025-07-27 12:09:57] 2025-07-27 16:09:25,872 | INFO     | . stage-in = 0 s
[2025-07-27 12:09:57] 2025-07-27 16:09:25,873 | INFO     | . payload execution = 8489 s
[2025-07-27 12:09:57] 2025-07-27 16:09:25,873 | INFO     | . stage-out = 2 s
[2025-07-27 12:09:57] 2025-07-27 16:09:25,873 | INFO     | . log creation = 0 s
[2025-07-27 12:09:57] 2025-07-27 16:09:25,873 | INFO     | ..............................
[2025-07-27 12:09:57] 2025-07-27 16:09:25,966 | INFO     | 
[2025-07-27 12:09:57] 2025-07-27 16:09:25,967 | INFO     | job summary report
[2025-07-27 12:09:57] 2025-07-27 16:09:25,967 | INFO     | --------------------------------------------------
[2025-07-27 12:09:57] 2025-07-27 16:09:25,967 | INFO     | PanDA job id: 6746238679
[2025-07-27 12:09:57] 2025-07-27 16:09:25,967 | INFO     | task id: 45743349
[2025-07-27 12:09:57] 2025-07-27 16:09:25,967 | INFO     | errors: (none)
[2025-07-27 12:09:57] 2025-07-27 16:09:25,967 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 12:09:57] 2025-07-27 16:09:25,967 | INFO     | pilot state: finished 
[2025-07-27 12:09:57] 2025-07-27 16:09:25,967 | INFO     | transexitcode: 0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,968 | INFO     | exeerrorcode: 0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,968 | INFO     | exeerrordiag: 
[2025-07-27 12:09:57] 2025-07-27 16:09:25,968 | INFO     | exitcode: 0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,968 | INFO     | exitmsg: OK
[2025-07-27 12:09:57] 2025-07-27 16:09:25,968 | INFO     | cpuconsumptiontime: 62474 s
[2025-07-27 12:09:57] 2025-07-27 16:09:25,968 | INFO     | nevents: 400
[2025-07-27 12:09:57] 2025-07-27 16:09:25,968 | INFO     | neventsw: 0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,968 | INFO     | pid: 6641
[2025-07-27 12:09:57] 2025-07-27 16:09:25,968 | INFO     | pgrp: 6641
[2025-07-27 12:09:57] 2025-07-27 16:09:25,969 | INFO     | corecount: 8
[2025-07-27 12:09:57] 2025-07-27 16:09:25,969 | INFO     | event service: False
[2025-07-27 12:09:57] 2025-07-27 16:09:25,969 | INFO     | sizes: {0: 2397252, 1: 2397451, 6: 2397713, 11: 2397741, 8505: 2425594, 8507: 2434592, 8509: 2434776, 8515: 2434970}
[2025-07-27 12:09:57] 2025-07-27 16:09:25,969 | INFO     | --------------------------------------------------
[2025-07-27 12:09:57] 2025-07-27 16:09:25,969 | INFO     | 
[2025-07-27 12:09:57] 2025-07-27 16:09:25,969 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 12:09:57] 2025-07-27 16:09:25,994 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,995 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,995 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,995 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,995 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,997 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,998 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 12:09:57] 2025-07-27 16:09:25,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,998 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 12:09:57] 2025-07-27 16:09:25,998 | INFO     | job 6746238679 has completed (purged errors)
[2025-07-27 12:09:57] 2025-07-27 16:09:25,999 | INFO     | overall cleanup function is called
[2025-07-27 12:09:57] 2025-07-27 16:09:27,007 | INFO     | --- collectZombieJob: --- 10, [6641]
[2025-07-27 12:09:57] 2025-07-27 16:09:27,007 | INFO     | zombie collector waiting for pid 6641
[2025-07-27 12:09:57] 2025-07-27 16:09:27,007 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 12:09:57] 2025-07-27 16:09:27,008 | INFO     | collected zombie processes
[2025-07-27 12:09:57] 2025-07-27 16:09:27,008 | INFO     | will attempt to kill all subprocesses of pid=6641
[2025-07-27 12:09:57] 2025-07-27 16:09:27,099 | INFO     | process IDs to be killed: [6641] (in reverse order)
[2025-07-27 12:09:57] 2025-07-27 16:09:27,155 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 12:09:57] 2025-07-27 16:09:27,155 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 12:09:57] 2025-07-27 16:09:27,160 | INFO     | did not find any defunct processes belonging to 6641
[2025-07-27 12:09:57] 2025-07-27 16:09:27,163 | INFO     | did not find any defunct processes belonging to 6641
[2025-07-27 12:09:57] 2025-07-27 16:09:27,163 | INFO     | ready for new job
[2025-07-27 12:09:57] 2025-07-27 16:09:27,163 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 12:09:57] 2025-07-27 16:09:27,165 | INFO     | ***************************************
[2025-07-27 12:09:57] 2025-07-27 16:09:27,165 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 12:09:57] 2025-07-27 16:09:27,165 | INFO     | ***************************************
[2025-07-27 12:09:57] 2025-07-27 16:09:27,165 | INFO     | 
[2025-07-27 12:09:57] 2025-07-27 16:09:27,166 | INFO     | architecture information:
[2025-07-27 12:09:57] 2025-07-27 16:09:27,166 | INFO     | executing command: cat /etc/os-release
[2025-07-27 12:09:57] 2025-07-27 16:09:27,184 | INFO     | cat /etc/os-release:
[2025-07-27 12:09:57] NAME="CentOS Linux"
[2025-07-27 12:09:57] VERSION="7 (Core)"
[2025-07-27 12:09:57] ID="centos"
[2025-07-27 12:09:57] ID_LIKE="rhel fedora"
[2025-07-27 12:09:57] VERSION_ID="7"
[2025-07-27 12:09:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 12:09:57] ANSI_COLOR="0;31"
[2025-07-27 12:09:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 12:09:57] HOME_URL="https://www.centos.org/"
[2025-07-27 12:09:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 12:09:57] 
[2025-07-27 12:09:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 12:09:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 12:09:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 12:09:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 12:09:57] 
[2025-07-27 12:09:57] 2025-07-27 16:09:27,184 | INFO     | ***************************************
[2025-07-27 12:09:57] 2025-07-27 16:09:27,687 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 12:09:57] 2025-07-27 16:09:27,707 | INFO     | sufficient remaining disk space (18713935872 B)
[2025-07-27 12:09:57] 2025-07-27 16:09:27,708 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 12:09:57] 2025-07-27 16:09:27,708 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 12:09:57] 2025-07-27 16:09:27,708 | INFO     | update_server=False
[2025-07-27 12:09:57] 2025-07-27 16:09:27,708 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 12:09:57] 2025-07-27 16:09:27,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:09:57] 2025-07-27 16:09:27,890 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:09:57] 2025-07-27 16:09:27,891 | INFO     | aborting loop
[2025-07-27 12:09:57] 2025-07-27 16:09:27,933 | INFO     | all job control threads have been joined
[2025-07-27 12:09:57] 2025-07-27 16:09:28,361 | INFO     | all payload control threads have been joined
[2025-07-27 12:09:57] 2025-07-27 16:09:28,516 | INFO     | all data control threads have been joined
[2025-07-27 12:09:57] 2025-07-27 16:09:28,713 | INFO     | [job] retrieve thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:28,714 | INFO     | [job] queue monitor thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:28,795 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:28,796 | INFO     | [data] copytool_in thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:28,817 | INFO     | [job] validate thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:28,818 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:28,896 | INFO     | [job] job monitor thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:28,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 12:09:57] 2025-07-27 16:09:28,939 | INFO     | [job] control thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:29,096 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:29,175 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:29,300 | INFO     | [payload] failed_post thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:29,367 | INFO     | [payload] control thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:29,517 | INFO     | [data] control thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:29,916 | INFO     | [payload] validate_post thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:30,736 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 12:09:57] 2025-07-27 16:09:30,908 | INFO     | [data] copytool_out thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:34,737 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 12:09:57] 2025-07-27 16:09:36,755 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139800019552064)>', '<ExcThread(monitor, started 139799214147328)>']
[2025-07-27 12:09:57] 2025-07-27 16:09:41,759 | INFO     | all workflow threads have been joined
[2025-07-27 12:09:57] 2025-07-27 16:09:41,760 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 12:09:57] 2025-07-27 16:09:41,760 | INFO     | traces error code: 0
[2025-07-27 12:09:57] 2025-07-27 16:09:41,761 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 12:09:57] 2025-07-27 16:09:57,440 | INFO     | PID=31452 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 12:09:57] 2025-07-27 16:09:57,441 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 12:09:57] 2025-07-27 16:09:57,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 12:09:57] 2025-07-27 16:09:57,441 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 12:09:57] 2025-07-27 16:09:57,441 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 12:09:57] 2025-07-27 16:09:57,441 | INFO     | [monitor] control thread has ended
[2025-07-27 12:09:57] 2025-07-27 16:09:57,556 [wrapper] ==== pilot stdout END ====
[2025-07-27 12:09:57] 2025-07-27 16:09:57,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 12:09:57] 2025-07-27 16:09:57,566 [wrapper] pilotpid: 31452
[2025-07-27 12:09:57] 2025-07-27 16:09:57,570 [wrapper] Pilot exit status: 0
[2025-07-27 12:09:57] 2025-07-27 16:09:57,587 [wrapper] pandaids: 6746238679 6746238679
[2025-07-27 12:09:57] 2025-07-27 16:09:57,632 [wrapper] cleanup supervisor_pilot  1945 31453
[2025-07-27 12:09:57] 2025-07-27 16:09:57,636 [wrapper] Test setup, not cleaning
[2025-07-27 12:09:57] 2025-07-27 16:09:57,641 [wrapper] apfmon messages muted
[2025-07-27 12:09:57] 2025-07-27 16:09:57,645 [wrapper] ==== wrapper stdout END ====
[2025-07-27 12:09:57] 2025-07-27 16:09:57,650 [wrapper] ==== wrapper stderr END ====
[2025-07-27 12:09:57]  *** Error codes and diagnostics ***
[2025-07-27 12:09:57]     "exeErrorCode": 0,
[2025-07-27 12:09:57]     "exeErrorDiag": "",
[2025-07-27 12:09:57]     "pilotErrorCode": 0,
[2025-07-27 12:09:57]     "pilotErrorDiag": "",
[2025-07-27 12:09:57]  *** Listing of results directory ***
[2025-07-27 12:09:57] total 487116
[2025-07-27 12:09:57] drwx------ 4 boincer umatlas      4096 Jun 17 06:04 pilot3
[2025-07-27 12:09:57] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 02:09 pilot3.tar.gz
[2025-07-27 12:09:57] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 02:18 queuedata.json
[2025-07-27 12:09:57] -rwx------ 1 boincer umatlas     36292 Jul 27 02:19 runpilot2-wrapper.sh
[2025-07-27 12:09:57] -rw-r--r-- 1 boincer umatlas       100 Jul 27 07:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 12:09:57] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 07:44 run_atlas
[2025-07-27 12:09:57] -rw-r--r-- 1 boincer umatlas       105 Jul 27 07:44 job.xml
[2025-07-27 12:09:57] -rw-r--r-- 3 boincer umatlas 145817885 Jul 27 07:44 EVNT.45743347._000984.pool.root.1
[2025-07-27 12:09:57] -rw-r--r-- 3 boincer umatlas 145817885 Jul 27 07:44 ATLAS.root_0
[2025-07-27 12:09:57] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 07:44 start_atlas.sh
[2025-07-27 12:09:57] drwxrwx--x 2 boincer umatlas      4096 Jul 27 07:44 shared
[2025-07-27 12:09:57] -rw-r--r-- 2 boincer umatlas    542898 Jul 27 07:44 input.tar.gz
[2025-07-27 12:09:57] -rw-r--r-- 1 boincer umatlas         0 Jul 27 07:44 boinc_lockfile
[2025-07-27 12:09:57] -rw-r--r-- 1 boincer umatlas      2562 Jul 27 09:46 pandaJob.out
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas    980117 Jul 27 09:47 agis_schedconf.cvmfs.json
[2025-07-27 12:09:57] -rw-r--r-- 1 boincer umatlas      5827 Jul 27 12:04 init_data.xml
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas 201084180 Jul 27 12:08 HITS.45743349._045655.pool.root.1
[2025-07-27 12:09:57] -rw-r--r-- 1 boincer umatlas       532 Jul 27 12:09 boinc_task_state.xml
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas      1049 Jul 27 12:09 memory_monitor_summary.json
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas        96 Jul 27 12:09 pilot_heartbeat.json
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas   1593052 Jul 27 12:09 agis_ddmendpoints.agis.ALL.json
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas    331742 Jul 27 12:09 log.45743349._045655.job.log.tgz.1
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas      7842 Jul 27 12:09 heartbeat.json
[2025-07-27 12:09:57] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 12:09 boinc_mmap_file
[2025-07-27 12:09:57] -rw-r--r-- 1 boincer umatlas        29 Jul 27 12:09 wrapper_checkpoint.txt
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas       745 Jul 27 12:09 pilotlog.txt
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas    772417 Jul 27 12:09 log.45743349._045655.job.log.1
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas       357 Jul 27 12:09 output.list
[2025-07-27 12:09:57] -rw-r--r-- 1 boincer umatlas       620 Jul 27 12:09 runtime_log
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas   1126400 Jul 27 12:09 result.tar.gz
[2025-07-27 12:09:57] -rw-r--r-- 1 boincer umatlas      8745 Jul 27 12:09 runtime_log.err
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas       785 Jul 27 12:09 lJkNDm1t9z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgTULDmQzkl6n.diag
[2025-07-27 12:09:57] -rw-r--r-- 1 boincer umatlas     23018 Jul 27 12:09 stderr.txt
[2025-07-27 12:09:57] HITS file was successfully produced:
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas 201084180 Jul 27 12:08 shared/HITS.pool.root.1
[2025-07-27 12:09:57]  *** Contents of shared directory: ***
[2025-07-27 12:09:57] total 340428
[2025-07-27 12:09:57] -rw-r--r-- 3 boincer umatlas 145817885 Jul 27 07:44 ATLAS.root_0
[2025-07-27 12:09:57] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 07:44 start_atlas.sh
[2025-07-27 12:09:57] -rw-r--r-- 2 boincer umatlas    542898 Jul 27 07:44 input.tar.gz
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas 201084180 Jul 27 12:08 HITS.pool.root.1
[2025-07-27 12:09:57] -rw------- 1 boincer umatlas   1126400 Jul 27 12:09 result.tar.gz
12:09:59 (27693): run_atlas exited; CPU time 62416.885604
12:09:59 (27693): called boinc_finish(0)

</stderr_txt>
]]>

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