Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:32:40 (477403): wrapper (7.7.26015): starting
04:32:40 (477403): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 04:32:40] Arguments: --nthreads 12
[2025-07-27 04:32:40] Threads: 12
[2025-07-27 04:32:40] Checking for CVMFS
[2025-07-27 04:32:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 04:32:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 04:32:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 04:32:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 04:32:41] 2.11.5.0 11050 25307 250180 148811 2 461 44954349 45568000 14914 130560 0 182909208 99.759 126210263 28227 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-27 04:32:41] CVMFS is ok
[2025-07-27 04:32:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 04:32:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 04:32:41] Further information can be found at the LHC@home message board.
[2025-07-27 04:32:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 04:32:41] Checking for apptainer binary...
[2025-07-27 04:32:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 04:32:41] Running /usr/bin/apptainer --version
[2025-07-27 04:32:41] apptainer version 1.4.1-1.el9
[2025-07-27 04:32:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 04:32:41] wns0033.triumf.lcg
[2025-07-27 04:32:41] apptainer works
[2025-07-27 04:32:41] Set ATHENA_PROC_NUMBER=12
[2025-07-27 04:32:41] Set ATHENA_CORE_NUMBER=12
[2025-07-27 04:32:41] Starting ATLAS job with PandaID=6746727389
[2025-07-27 04:32:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 04:38:08]  *** The last 200 lines of the pilot log: ***
[2025-07-27 04:38:08] 2025-07-27 11:37:31,682 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 04:38:08] 2025-07-27 11:37:31,682 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 04:38:08] 2025-07-27 11:37:31,682 | WARNING  | wrong length of table data, x=[1753616054.0], y=[3045.0] (must be same and length>=4)
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | could have reported an average CPU frequency of 2507 MHz (4 samples)
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | ..............................
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . Timing measurements:
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . get job = 0 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . initial setup = 4 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . payload setup = 20 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . stage-in = 0 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . payload execution = 64 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . stage-out = 0 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . log creation = 0 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | ..............................
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6746727389/pilotlog.txt
[2025-07-27 04:38:08] 2025-07-27 11:37:31,773 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-27 04:38:08] - Log from pilotlog.txt -
[2025-07-27 04:38:08] 2025-07-27 11:37:31,669 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6746727389/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 04:38:08] 2025-07-27 11:37:31,681 | INFO     | extracted standard info from prmon json
[2025-07-27 04:38:08] 2025-07-27 11:37:31,682 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 04:38:08] 2025-07-27 11:37:31,682 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 04:38:08] 2025-07-27 11:37:31,682 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 04:38:08] 2025-07-27 11:37:31,682 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 04:38:08] 2025-07-27 11:37:31,682 | WARNING  | wrong length of table data, x=[1753616054.0], y=[3045.0] (must be same and length>=4)
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | could have reported an average CPU frequency of 2507 MHz (4 samples)
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | ..............................
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . Timing measurements:
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . get job = 0 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . initial setup = 4 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . payload setup = 20 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . stage-in = 0 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . payload execution = 64 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . stage-out = 0 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . log creation = 0 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | ..............................
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6746727389/pilotlog.txt
[2025-07-27 04:38:08] 2025-07-27 11:37:31,773 | WARNING  | 
[2025-07-27 04:38:08] [begin log extracts]
[2025-07-27 04:38:08] - Log from pilotlog.txt -
[2025-07-27 04:38:08] 2025-07-27 11:37:31,669 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6746727389/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 04:38:08] 2025-07-27 11:37:31,681 | INFO     | extracted standard info from prmon json
[2025-07-27 04:38:08] 2025-07-27 11:37:31,682 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 04:38:08] 2025-07-27 11:37:31,682 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 04:38:08] 2025-07-27 11:37:31,682 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 04:38:08] 2025-07-27 11:37:31,682 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 04:38:08] 2025-07-27 11:37:31,682 | WARNING  | wrong length of table data, x=[1753616054.0], y=[3045.0] (must be same and length>=4)
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | could have reported an average CPU frequency of 2507 MHz (4 samples)
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | ..............................
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . Timing measurements:
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . get job = 0 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . initial setup = 4 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . payload setup = 20 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . stage-in = 0 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . payload execution = 64 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . stage-out = 0 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | . log creation = 0 s
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | ..............................
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 04:38:08] 2025-07-27 11:37:31,683 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6746727389/pilotlog.txt
[2025-07-27 04:38:08] [end log extracts]
[2025-07-27 04:38:08] 2025-07-27 11:37:31,774 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-27 04:38:08] 2025-07-27 11:37:31,774 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-27 04:38:08] 2025-07-27 11:37:32,682 | INFO     | 
[2025-07-27 04:38:08] 2025-07-27 11:37:32,682 | INFO     | job summary report
[2025-07-27 04:38:08] 2025-07-27 11:37:32,682 | INFO     | --------------------------------------------------
[2025-07-27 04:38:08] 2025-07-27 11:37:32,682 | INFO     | PanDA job id: 6746727389
[2025-07-27 04:38:08] 2025-07-27 11:37:32,682 | INFO     | task id: 45743349
[2025-07-27 04:38:08] 2025-07-27 11:37:32,682 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-27 04:34:54,018 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-27 04:38:08] 2025-07-27 11:37:32,682 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | pilot state: failed 
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | transexitcode: 65
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | exeerrorcode: 65
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | exitcode: 65
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | cpuconsumptiontime: 17 s
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | nevents: 0
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | neventsw: 0
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | pid: 487294
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | pgrp: 487294
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | corecount: 12
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | event service: False
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | sizes: {0: 2396589, 1: 2397442, 7: 2397704, 12: 2397732, 89: 2420990, 90: 2425282, 92: 2425438, 236: 2425604}
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | --------------------------------------------------
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | 
[2025-07-27 04:38:08] 2025-07-27 11:37:32,683 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-27 04:38:08] 2025-07-27 11:37:32,790 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,791 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,791 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,791 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,791 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,791 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,791 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,791 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,791 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,791 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,791 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,791 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,791 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,792 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,792 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,792 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,792 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 04:38:08] 2025-07-27 11:37:32,792 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,792 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 04:38:08] 2025-07-27 11:37:32,792 | INFO     | job 6746727389 has completed (purged errors)
[2025-07-27 04:38:08] 2025-07-27 11:37:32,792 | INFO     | overall cleanup function is called
[2025-07-27 04:38:08] 2025-07-27 11:37:33,799 | INFO     | --- collectZombieJob: --- 10, [487294]
[2025-07-27 04:38:08] 2025-07-27 11:37:33,799 | INFO     | zombie collector waiting for pid 487294
[2025-07-27 04:38:08] 2025-07-27 11:37:33,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 04:38:08] 2025-07-27 11:37:33,799 | INFO     | collected zombie processes
[2025-07-27 04:38:08] 2025-07-27 11:37:33,799 | INFO     | will attempt to kill all subprocesses of pid=487294
[2025-07-27 04:38:08] 2025-07-27 11:37:34,539 | INFO     | process IDs to be killed: [487294] (in reverse order)
[2025-07-27 04:38:08] 2025-07-27 11:37:34,754 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 04:38:08] 2025-07-27 11:37:34,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 04:38:08] 2025-07-27 11:37:34,810 | INFO     | did not find any defunct processes belonging to 487294
[2025-07-27 04:38:08] 2025-07-27 11:37:34,842 | INFO     | did not find any defunct processes belonging to 487294
[2025-07-27 04:38:08] 2025-07-27 11:37:34,868 | INFO     | ready for new job
[2025-07-27 04:38:08] 2025-07-27 11:37:34,868 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 04:38:08] 2025-07-27 11:37:34,870 | INFO     | ***************************************
[2025-07-27 04:38:08] 2025-07-27 11:37:34,870 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 04:38:08] 2025-07-27 11:37:34,870 | INFO     | ***************************************
[2025-07-27 04:38:08] 2025-07-27 11:37:34,870 | INFO     | 
[2025-07-27 04:38:08] 2025-07-27 11:37:34,905 | INFO     | architecture information:
[2025-07-27 04:38:08] 2025-07-27 11:37:34,918 | INFO     | executing command: cat /etc/os-release
[2025-07-27 04:38:08] 2025-07-27 11:37:34,975 | INFO     | cat /etc/os-release:
[2025-07-27 04:38:08] NAME="CentOS Linux"
[2025-07-27 04:38:08] VERSION="7 (Core)"
[2025-07-27 04:38:08] ID="centos"
[2025-07-27 04:38:08] ID_LIKE="rhel fedora"
[2025-07-27 04:38:08] VERSION_ID="7"
[2025-07-27 04:38:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 04:38:08] ANSI_COLOR="0;31"
[2025-07-27 04:38:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 04:38:08] HOME_URL="https://www.centos.org/"
[2025-07-27 04:38:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 04:38:08] 
[2025-07-27 04:38:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 04:38:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 04:38:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 04:38:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 04:38:08] 
[2025-07-27 04:38:08] 2025-07-27 11:37:34,976 | INFO     | ***************************************
[2025-07-27 04:38:08] 2025-07-27 11:37:35,479 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-27 04:38:08] 2025-07-27 11:37:35,539 | INFO     | sufficient remaining disk space (2045265313792 B)
[2025-07-27 04:38:08] 2025-07-27 11:37:35,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 04:38:08] 2025-07-27 11:37:35,544 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 04:38:08] 2025-07-27 11:37:35,544 | INFO     | update_server=False
[2025-07-27 04:38:08] 2025-07-27 11:37:35,544 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 04:38:08] 2025-07-27 11:37:35,545 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 04:38:08] 2025-07-27 11:37:35,775 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 04:38:08] 2025-07-27 11:37:35,775 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 04:38:08] 2025-07-27 11:37:35,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:38:08] 2025-07-27 11:37:35,775 | INFO     | will abort loop
[2025-07-27 04:38:08] 2025-07-27 11:37:36,421 | INFO     | all data control threads have been joined
[2025-07-27 04:38:08] 2025-07-27 11:37:36,550 | INFO     | [job] retrieve thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:36,688 | INFO     | all payload control threads have been joined
[2025-07-27 04:38:08] 2025-07-27 11:37:36,706 | INFO     | all job control threads have been joined
[2025-07-27 04:38:08] 2025-07-27 11:37:36,781 | INFO     | [job] job monitor thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:36,874 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:36,911 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:37,042 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:37,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:38:08] 2025-07-27 11:37:37,212 | INFO     | [payload] failed_post thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:37,418 | INFO     | [data] copytool_in thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:37,427 | INFO     | [data] control thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:37,552 | INFO     | [data] copytool_out thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:37,694 | INFO     | [payload] control thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:37,712 | INFO     | [job] control thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:37,717 | INFO     | [payload] validate_post thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:37,870 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:37,946 | INFO     | [job] validate thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:38,214 | INFO     | [job] queue monitor thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:38,624 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 04:38:08] 2025-07-27 11:37:42,633 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 04:38:08] 2025-07-27 11:37:42,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140611651766080)>', '<ExcThread(monitor, started 140611122362112)>']
[2025-07-27 04:38:08] 2025-07-27 11:37:47,846 | INFO     | all workflow threads have been joined
[2025-07-27 04:38:08] 2025-07-27 11:37:47,846 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 04:38:08] 2025-07-27 11:37:47,846 | INFO     | traces error code: 0
[2025-07-27 04:38:08] 2025-07-27 11:37:47,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 04:38:08] 2025-07-27 11:38:06,170 | INFO     | PID=480971 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 04:38:08] 2025-07-27 11:38:06,170 | INFO     | .. there are 21 such processes running
[2025-07-27 04:38:08] 2025-07-27 11:38:06,171 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 04:38:08] 2025-07-27 11:38:06,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 04:38:08] 2025-07-27 11:38:06,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 04:38:08] 2025-07-27 11:38:06,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 04:38:08] 2025-07-27 11:38:06,171 | INFO     | [monitor] control thread has ended
[2025-07-27 04:38:08] 2025-07-27 11:38:06,782 [wrapper] ==== pilot stdout END ====
[2025-07-27 04:38:08] 2025-07-27 11:38:06,795 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 04:38:08] 2025-07-27 11:38:06,827 [wrapper] pilotpid: 480971
[2025-07-27 04:38:08] 2025-07-27 11:38:06,843 [wrapper] Pilot exit status: 0
[2025-07-27 04:38:08] 2025-07-27 11:38:06,961 [wrapper] pandaids: 6746727389
[2025-07-27 04:38:08] 2025-07-27 11:38:07,405 [wrapper] cleanup supervisor_pilot  480977 480972
[2025-07-27 04:38:08] 2025-07-27 11:38:07,422 [wrapper] Test setup, not cleaning
[2025-07-27 04:38:08] 2025-07-27 11:38:07,443 [wrapper] apfmon messages muted
[2025-07-27 04:38:08] 2025-07-27 11:38:07,518 [wrapper] ==== wrapper stdout END ====
[2025-07-27 04:38:08] 2025-07-27 11:38:07,551 [wrapper] ==== wrapper stderr END ====
[2025-07-27 04:38:08]  *** Error codes and diagnostics ***
[2025-07-27 04:38:08]     "exeErrorCode": 65,
[2025-07-27 04:38:08]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 04:38:08]     "pilotErrorCode": 1305,
[2025-07-27 04:38:08]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 04:38:08]  *** Listing of results directory ***
[2025-07-27 04:38:08] total 147000
[2025-07-27 04:38:08] -rw-r--r--. 1 boinc boinc    530466 Jul 27 01:38 pilot3.tar.gz
[2025-07-27 04:38:08] -rwx------. 1 boinc boinc     36292 Jul 27 01:50 runpilot2-wrapper.sh
[2025-07-27 04:38:08] -rw-r--r--. 1 boinc boinc      5112 Jul 27 01:50 queuedata.json
[2025-07-27 04:38:08] -rw-r--r--. 1 boinc boinc       100 Jul 27 04:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 04:38:08] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 04:32 run_atlas
[2025-07-27 04:38:08] -rw-r--r--. 1 boinc boinc       105 Jul 27 04:32 job.xml
[2025-07-27 04:38:08] -rw-r--r--. 1 boinc boinc      6595 Jul 27 04:32 init_data.xml
[2025-07-27 04:38:08] -rw-r--r--. 2 boinc boinc 146468357 Jul 27 04:32 EVNT.45743347._001395.pool.root.1
[2025-07-27 04:38:08] -rw-r--r--. 2 boinc boinc     15095 Jul 27 04:32 start_atlas.sh
[2025-07-27 04:38:08] drwxrwx--x. 2 boinc boinc      4096 Jul 27 04:32 shared
[2025-07-27 04:38:08] -rw-r--r--. 2 boinc boinc    542886 Jul 27 04:32 input.tar.gz
[2025-07-27 04:38:08] -rw-r--r--. 1 boinc boinc         0 Jul 27 04:32 boinc_lockfile
[2025-07-27 04:38:08] -rw-r--r--. 1 boinc boinc      2559 Jul 27 04:32 pandaJob.out
[2025-07-27 04:38:08] -rw-------. 1 boinc boinc    980109 Jul 27 04:33 agis_schedconf.cvmfs.json
[2025-07-27 04:38:08] -rw-------. 1 boinc boinc   1593052 Jul 27 04:33 agis_ddmendpoints.agis.ALL.json
[2025-07-27 04:38:08] drwx------. 4 boinc boinc      4096 Jul 27 04:33 pilot3
[2025-07-27 04:38:08] -rw-r--r--. 1 boinc boinc       523 Jul 27 04:34 boinc_task_state.xml
[2025-07-27 04:38:08] -rw-------. 1 boinc boinc       955 Jul 27 04:35 memory_monitor_summary.json
[2025-07-27 04:38:08] -rw-------. 1 boinc boinc     21750 Jul 27 04:35 log.45743349._046329.job.log.tgz.1
[2025-07-27 04:38:08] -rw-------. 1 boinc boinc        95 Jul 27 04:37 pilot_heartbeat.json
[2025-07-27 04:38:08] -rw-------. 1 boinc boinc      8389 Jul 27 04:37 heartbeat.json
[2025-07-27 04:38:08] -rw-r--r--. 1 boinc boinc        22 Jul 27 04:38 wrapper_checkpoint.txt
[2025-07-27 04:38:08] -rw-r--r--. 1 boinc boinc      8192 Jul 27 04:38 boinc_mmap_file
[2025-07-27 04:38:08] -rw-------. 1 boinc boinc       822 Jul 27 04:38 pilotlog.txt
[2025-07-27 04:38:08] -rw-------. 1 boinc boinc     82649 Jul 27 04:38 log.45743349._046329.job.log.1
[2025-07-27 04:38:08] -rw-------. 1 boinc boinc       188 Jul 27 04:38 output.list
[2025-07-27 04:38:08] -rw-r--r--. 1 boinc boinc       620 Jul 27 04:38 runtime_log
[2025-07-27 04:38:08] -rw-------. 1 boinc boinc    122880 Jul 27 04:38 result.tar.gz
[2025-07-27 04:38:08] -rw-r--r--. 1 boinc boinc      8485 Jul 27 04:38 runtime_log.err
[2025-07-27 04:38:08] -rw-------. 1 boinc boinc       643 Jul 27 04:38 6pUKDmCGC07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjnULDmSZEgIo.diag
[2025-07-27 04:38:08] -rw-r--r--. 1 boinc boinc      2139 Jul 27 04:38 stderr.txt
[2025-07-27 04:38:08] No HITS result produced
[2025-07-27 04:38:08]  *** Contents of shared directory: ***
[2025-07-27 04:38:08] total 143704
[2025-07-27 04:38:08] -rw-r--r--. 2 boinc boinc 146468357 Jul 27 04:32 ATLAS.root_0
[2025-07-27 04:38:08] -rw-r--r--. 2 boinc boinc     15095 Jul 27 04:32 start_atlas.sh
[2025-07-27 04:38:08] -rw-r--r--. 2 boinc boinc    542886 Jul 27 04:32 input.tar.gz
[2025-07-27 04:38:08] -rw-------. 1 boinc boinc    122880 Jul 27 04:38 result.tar.gz
04:38:10 (477403): run_atlas exited; CPU time 27.013770
04:38:10 (477403): called boinc_finish(0)

</stderr_txt>
]]>

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