Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:44:12 (3482332): wrapper (7.7.26015): starting
18:44:12 (3482332): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 18:44:12] Arguments: --nthreads 12
[2025-07-27 18:44:12] Threads: 12
[2025-07-27 18:44:12] Checking for CVMFS
[2025-07-27 18:44:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:44:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:44:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:44:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:44:13] 2.13.1.0 659355 8382 109340 148818 1 57 2452220 4097024 0 130560 0 7047834 99.991 303970 8214 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-27 18:44:13] CVMFS is ok
[2025-07-27 18:44:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:44:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:44:13] Further information can be found at the LHC@home message board.
[2025-07-27 18:44:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:44:13] Checking for apptainer binary...
[2025-07-27 18:44:13] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-27 18:44:13] apptainer is not installed, using version from CVMFS
[2025-07-27 18:44:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:44:13] pckelar8.cern.ch
[2025-07-27 18:44:13] apptainer works
[2025-07-27 18:44:13] Set ATHENA_PROC_NUMBER=12
[2025-07-27 18:44:13] Set ATHENA_CORE_NUMBER=12
[2025-07-27 18:44:13] Starting ATLAS job with PandaID=6746137302
[2025-07-27 18:44:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:14:59]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:14:59]  lfn=log.45758383._000120.job.log.tgz.1
[2025-07-27 20:14:59]  mtime=0
[2025-07-27 20:14:59]  protocol_id=None
[2025-07-27 20:14:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 20:14:59]  replicas=None
[2025-07-27 20:14:59]  scope=mc23_13p6TeV
[2025-07-27 20:14:59]  status=None
[2025-07-27 20:14:59]  status_code=0
[2025-07-27 20:14:59]  storage_token=
[2025-07-27 20:14:59]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6746137302/log.45758383._000120.job.log.tgz.1
[2025-07-27 20:14:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/8c/log.45758383._000120.job.log.tgz.1
[2025-07-27 20:14:59]  workdir=None
[2025-07-27 20:14:59] ]
[2025-07-27 20:14:59] 2025-07-27 18:14:21,659 | INFO     | transferring file log.45758383._000120.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6746137302/log.45758383._000120.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 20:14:59] 2025-07-27 18:14:21,660 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6746137302/log.45758383._000120.job.log.tgz.1 /var/lib/boinc/slots/0/log.45758383._000120.job
[2025-07-27 20:14:59] 2025-07-27 18:14:21,677 | INFO     | adding to output.list: log.45758383._000120.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/8c/log.45758383._000120.job.log.tg
[2025-07-27 20:14:59] 2025-07-27 18:14:21,677 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:14:59] 2025-07-27 18:14:21,677 | INFO     | summary of transferred files:
[2025-07-27 20:14:59] 2025-07-27 18:14:21,678 | INFO     |  -- lfn=log.45758383._000120.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:14:59] 2025-07-27 18:14:21,678 | INFO     | stage-out finished correctly
[2025-07-27 20:14:59] 2025-07-27 18:14:21,745 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:14:59] 2025-07-27 18:14:21,812 | INFO     | job 6746137302 has state=finished
[2025-07-27 20:14:59] 2025-07-27 18:14:21,812 | INFO     | preparing for final server update for job 6746137302 in state='finished'
[2025-07-27 20:14:59] 2025-07-27 18:14:21,813 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:14:59] 2025-07-27 18:14:21,813 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:14:59] 2025-07-27 18:14:21,813 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:14:59] 2025-07-27 18:14:21,813 | INFO     | job 6746137302 has finished - writing final server update
[2025-07-27 20:14:59] 2025-07-27 18:14:21,813 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:14:59] 2025-07-27 18:14:21,815 | INFO     | executing command: lscpu
[2025-07-27 20:14:59] 2025-07-27 18:14:21,835 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:14:59] 2025-07-27 18:14:23,144 | INFO     | monitor loop #413: job 0:6746137302 is in state 'finished'
[2025-07-27 20:14:59] 2025-07-27 18:14:23,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:14:59] 2025-07-27 18:14:25,647 | INFO     | monitor loop #414: job 0:6746137302 is in state 'finished'
[2025-07-27 20:14:59] 2025-07-27 18:14:25,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:14:59] 2025-07-27 18:14:25,912 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 20:14:59] 2025-07-27 18:14:25,914 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2212.2687500000006
[2025-07-27 20:14:59] 2025-07-27 18:14:25,916 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6746137302/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:14:59] 2025-07-27 18:14:25,916 | INFO     | extracted standard info from prmon json
[2025-07-27 20:14:59] 2025-07-27 18:14:25,916 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:14:59] 2025-07-27 18:14:25,917 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:14:59] 2025-07-27 18:14:25,917 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:14:59] 2025-07-27 18:14:25,917 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:14:59] 2025-07-27 18:14:25,919 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:14:59] 2025-07-27 18:14:25,919 | INFO     | sum of square deviations: 170944600.5
[2025-07-27 20:14:59] 2025-07-27 18:14:25,919 | INFO     | sum of deviations: -13903305623.0
[2025-07-27 20:14:59] 2025-07-27 18:14:25,919 | INFO     | mean x: 1753637458.5
[2025-07-27 20:14:59] 2025-07-27 18:14:25,920 | INFO     | mean y: 2875702.3414634145
[2025-07-27 20:14:59] 2025-07-27 18:14:25,920 | INFO     | -- intersect: 142630121407.39944
[2025-07-27 20:14:59] 2025-07-27 18:14:25,920 | INFO     | intersect: 142630121407.39944
[2025-07-27 20:14:59] 2025-07-27 18:14:25,920 | INFO     | chi2: 0.14659935004781915
[2025-07-27 20:14:59] 2025-07-27 18:14:25,920 | INFO     | -- intersect: 142630121407.39944
[2025-07-27 20:14:59] 2025-07-27 18:14:25,920 | INFO     | current memory leak: -81.33 B/s (using 82 data points, chi2=0.15)
[2025-07-27 20:14:59] 2025-07-27 18:14:25,920 | INFO     | could have reported an average CPU frequency of 2536 MHz (6 samples)
[2025-07-27 20:14:59] 2025-07-27 18:14:25,921 | INFO     | ..............................
[2025-07-27 20:14:59] 2025-07-27 18:14:25,921 | INFO     | . Timing measurements:
[2025-07-27 20:14:59] 2025-07-27 18:14:25,921 | INFO     | . get job = 0 s
[2025-07-27 20:14:59] 2025-07-27 18:14:25,921 | INFO     | . initial setup = 1 s
[2025-07-27 20:14:59] 2025-07-27 18:14:25,921 | INFO     | . payload setup = 5 s
[2025-07-27 20:14:59] 2025-07-27 18:14:25,921 | INFO     | . stage-in = 0 s
[2025-07-27 20:14:59] 2025-07-27 18:14:25,921 | INFO     | . payload execution = 5377 s
[2025-07-27 20:14:59] 2025-07-27 18:14:25,921 | INFO     | . stage-out = 0 s
[2025-07-27 20:14:59] 2025-07-27 18:14:25,921 | INFO     | . log creation = 0 s
[2025-07-27 20:14:59] 2025-07-27 18:14:25,921 | INFO     | ..............................
[2025-07-27 20:14:59] 2025-07-27 18:14:26,375 | INFO     | 
[2025-07-27 20:14:59] 2025-07-27 18:14:26,376 | INFO     | job summary report
[2025-07-27 20:14:59] 2025-07-27 18:14:26,376 | INFO     | --------------------------------------------------
[2025-07-27 20:14:59] 2025-07-27 18:14:26,376 | INFO     | PanDA job id: 6746137302
[2025-07-27 20:14:59] 2025-07-27 18:14:26,376 | INFO     | task id: 45758383
[2025-07-27 20:14:59] 2025-07-27 18:14:26,376 | INFO     | errors: (none)
[2025-07-27 20:14:59] 2025-07-27 18:14:26,376 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:14:59] 2025-07-27 18:14:26,376 | INFO     | pilot state: finished 
[2025-07-27 20:14:59] 2025-07-27 18:14:26,376 | INFO     | transexitcode: 0
[2025-07-27 20:14:59] 2025-07-27 18:14:26,376 | INFO     | exeerrorcode: 0
[2025-07-27 20:14:59] 2025-07-27 18:14:26,376 | INFO     | exeerrordiag: 
[2025-07-27 20:14:59] 2025-07-27 18:14:26,377 | INFO     | exitcode: 0
[2025-07-27 20:14:59] 2025-07-27 18:14:26,377 | INFO     | exitmsg: OK
[2025-07-27 20:14:59] 2025-07-27 18:14:26,377 | INFO     | cpuconsumptiontime: 58232 s
[2025-07-27 20:14:59] 2025-07-27 18:14:26,377 | INFO     | nevents: 400
[2025-07-27 20:14:59] 2025-07-27 18:14:26,377 | INFO     | neventsw: 0
[2025-07-27 20:14:59] 2025-07-27 18:14:26,377 | INFO     | pid: 3493090
[2025-07-27 20:14:59] 2025-07-27 18:14:26,377 | INFO     | pgrp: 3493090
[2025-07-27 20:14:59] 2025-07-27 18:14:26,377 | INFO     | corecount: 12
[2025-07-27 20:14:59] 2025-07-27 18:14:26,377 | INFO     | event service: False
[2025-07-27 20:14:59] 2025-07-27 18:14:26,377 | INFO     | sizes: {0: 2397463, 3: 2397725, 11: 2397753, 5386: 2424365, 5387: 2433418, 5392: 2433556}
[2025-07-27 20:14:59] 2025-07-27 18:14:26,377 | INFO     | --------------------------------------------------
[2025-07-27 20:14:59] 2025-07-27 18:14:26,377 | INFO     | 
[2025-07-27 20:14:59] 2025-07-27 18:14:26,378 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 20:14:59] 2025-07-27 18:14:26,396 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,396 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,396 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,396 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,397 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:14:59] 2025-07-27 18:14:26,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:14:59] 2025-07-27 18:14:26,398 | INFO     | job 6746137302 has completed (purged errors)
[2025-07-27 20:14:59] 2025-07-27 18:14:26,398 | INFO     | overall cleanup function is called
[2025-07-27 20:14:59] 2025-07-27 18:14:26,684 | INFO     | PID=3486006 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:14:59] 2025-07-27 18:14:27,406 | INFO     | --- collectZombieJob: --- 10, [3493090]
[2025-07-27 20:14:59] 2025-07-27 18:14:27,406 | INFO     | zombie collector waiting for pid 3493090
[2025-07-27 20:14:59] 2025-07-27 18:14:27,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:14:59] 2025-07-27 18:14:27,406 | INFO     | collected zombie processes
[2025-07-27 20:14:59] 2025-07-27 18:14:27,406 | INFO     | will attempt to kill all subprocesses of pid=3493090
[2025-07-27 20:14:59] 2025-07-27 18:14:27,473 | INFO     | process IDs to be killed: [3493090] (in reverse order)
[2025-07-27 20:14:59] 2025-07-27 18:14:27,506 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:14:59] 2025-07-27 18:14:27,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:14:59] 2025-07-27 18:14:27,508 | INFO     | did not find any defunct processes belonging to 3493090
[2025-07-27 20:14:59] 2025-07-27 18:14:27,510 | INFO     | did not find any defunct processes belonging to 3493090
[2025-07-27 20:14:59] 2025-07-27 18:14:27,510 | INFO     | ready for new job
[2025-07-27 20:14:59] 2025-07-27 18:14:27,510 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:14:59] 2025-07-27 18:14:27,512 | INFO     | ***************************************
[2025-07-27 20:14:59] 2025-07-27 18:14:27,512 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:14:59] 2025-07-27 18:14:27,512 | INFO     | ***************************************
[2025-07-27 20:14:59] 2025-07-27 18:14:27,512 | INFO     | 
[2025-07-27 20:14:59] 2025-07-27 18:14:27,513 | INFO     | architecture information:
[2025-07-27 20:14:59] 2025-07-27 18:14:27,513 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:14:59] 2025-07-27 18:14:27,524 | INFO     | cat /etc/os-release:
[2025-07-27 20:14:59] NAME="CentOS Linux"
[2025-07-27 20:14:59] VERSION="7 (Core)"
[2025-07-27 20:14:59] ID="centos"
[2025-07-27 20:14:59] ID_LIKE="rhel fedora"
[2025-07-27 20:14:59] VERSION_ID="7"
[2025-07-27 20:14:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:14:59] ANSI_COLOR="0;31"
[2025-07-27 20:14:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:14:59] HOME_URL="https://www.centos.org/"
[2025-07-27 20:14:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:14:59] 
[2025-07-27 20:14:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:14:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:14:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:14:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:14:59] 
[2025-07-27 20:14:59] 2025-07-27 18:14:27,525 | INFO     | ***************************************
[2025-07-27 20:14:59] 2025-07-27 18:14:28,027 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 20:14:59] 2025-07-27 18:14:28,041 | INFO     | sufficient remaining disk space (1717726871552 B)
[2025-07-27 20:14:59] 2025-07-27 18:14:28,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:14:59] 2025-07-27 18:14:28,042 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:14:59] 2025-07-27 18:14:28,042 | INFO     | update_server=False
[2025-07-27 20:14:59] 2025-07-27 18:14:28,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:14:59] 2025-07-27 18:14:28,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:14:59] 2025-07-27 18:14:28,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:14:59] 2025-07-27 18:14:28,057 | INFO     | all data control threads have been joined
[2025-07-27 20:14:59] 2025-07-27 18:14:28,150 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 20:14:59] 2025-07-27 18:14:28,150 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 20:14:59] 2025-07-27 18:14:28,150 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:14:59] 2025-07-27 18:14:28,150 | INFO     | will abort loop
[2025-07-27 20:14:59] 2025-07-27 18:14:28,705 | INFO     | all payload control threads have been joined
[2025-07-27 20:14:59] 2025-07-27 18:14:29,047 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:29,060 | INFO     | [data] control thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:29,156 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:29,291 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:29,315 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:29,328 | INFO     | all job control threads have been joined
[2025-07-27 20:14:59] 2025-07-27 18:14:29,456 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:29,558 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:29,710 | INFO     | [payload] control thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:30,048 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:30,127 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:30,333 | INFO     | [job] control thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:30,497 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:30,515 | INFO     | [job] validate thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:30,998 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:14:59] 2025-07-27 18:14:32,004 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:32,048 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:38,256 | INFO     | job.realtimelogging is not enabled
[2025-07-27 20:14:59] 2025-07-27 18:14:39,261 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:14:59] 2025-07-27 18:14:40,109 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995450537792)>', '<ExcThread(monitor, started 139994249291520)>']
[2025-07-27 20:14:59] 2025-07-27 18:14:45,129 | INFO     | all workflow threads have been joined
[2025-07-27 20:14:59] 2025-07-27 18:14:45,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:14:59] 2025-07-27 18:14:45,129 | INFO     | traces error code: 0
[2025-07-27 20:14:59] 2025-07-27 18:14:45,129 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:14:59] 2025-07-27 18:14:58,856 | INFO     | PID=3486006 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:14:59] 2025-07-27 18:14:58,856 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:14:59] 2025-07-27 18:14:58,856 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:14:59] 2025-07-27 18:14:58,857 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:14:59] 2025-07-27 18:14:58,857 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:14:59] 2025-07-27 18:14:58,857 | INFO     | [monitor] control thread has ended
[2025-07-27 20:14:59] 2025-07-27 18:14:58,943 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:14:59] 2025-07-27 18:14:58,946 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:14:59] 2025-07-27 18:14:58,949 [wrapper] pilotpid: 3486006
[2025-07-27 20:14:59] 2025-07-27 18:14:58,952 [wrapper] Pilot exit status: 0
[2025-07-27 20:14:59] 2025-07-27 18:14:58,960 [wrapper] pandaids: 6746137302
[2025-07-27 20:14:59] 2025-07-27 18:14:58,978 [wrapper] cleanup supervisor_pilot 3508245 3486007
[2025-07-27 20:14:59] 2025-07-27 18:14:58,980 [wrapper] Test setup, not cleaning
[2025-07-27 20:14:59] 2025-07-27 18:14:58,982 [wrapper] apfmon messages muted
[2025-07-27 20:14:59] 2025-07-27 18:14:58,984 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:14:59] 2025-07-27 18:14:58,986 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:14:59]  *** Error codes and diagnostics ***
[2025-07-27 20:14:59]     "exeErrorCode": 0,
[2025-07-27 20:14:59]     "exeErrorDiag": "",
[2025-07-27 20:14:59]     "pilotErrorCode": 0,
[2025-07-27 20:14:59]     "pilotErrorDiag": "",
[2025-07-27 20:14:59]  *** Listing of results directory ***
[2025-07-27 20:14:59] total 411872
[2025-07-27 20:14:59] -rw-r--r-- 1 boinc boinc    530466 Jul 27 07:42 pilot3.tar.gz
[2025-07-27 20:14:59] -rwx------ 1 boinc boinc     36292 Jul 27 07:44 runpilot2-wrapper.sh
[2025-07-27 20:14:59] -rw-r--r-- 1 boinc boinc      5112 Jul 27 07:44 queuedata.json
[2025-07-27 20:14:59] -rw-r--r-- 1 boinc boinc       100 Jul 27 18:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:14:59] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 18:44 run_atlas
[2025-07-27 20:14:59] -rw-r--r-- 1 boinc boinc       105 Jul 27 18:44 job.xml
[2025-07-27 20:14:59] -rw-r--r-- 2 boinc boinc 242454575 Jul 27 18:44 EVNT.45758381._000005.pool.root.1
[2025-07-27 20:14:59] -rw-r--r-- 2 boinc boinc    542879 Jul 27 18:44 input.tar.gz
[2025-07-27 20:14:59] -rw-r--r-- 1 boinc boinc      6251 Jul 27 18:44 init_data.xml
[2025-07-27 20:14:59] -rw-r--r-- 2 boinc boinc     15095 Jul 27 18:44 start_atlas.sh
[2025-07-27 20:14:59] drwxrwx--x 2 boinc boinc      4096 Jul 27 18:44 shared
[2025-07-27 20:14:59] -rw-r--r-- 1 boinc boinc         0 Jul 27 18:44 boinc_lockfile
[2025-07-27 20:14:59] -rw-r--r-- 1 boinc boinc      2554 Jul 27 18:44 pandaJob.out
[2025-07-27 20:14:59] -rw------- 1 boinc boinc    980125 Jul 27 18:44 agis_schedconf.cvmfs.json
[2025-07-27 20:14:59] -rw------- 1 boinc boinc   1593052 Jul 27 18:44 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:14:59] drwx------ 4 boinc boinc      4096 Jul 27 18:44 pilot3
[2025-07-27 20:14:59] -rw------- 1 boinc boinc 173633837 Jul 27 20:13 HITS.45758383._000120.pool.root.1
[2025-07-27 20:14:59] -rw------- 1 boinc boinc      1016 Jul 27 20:14 memory_monitor_summary.json
[2025-07-27 20:14:59] -rw-r--r-- 1 boinc boinc       530 Jul 27 20:14 boinc_task_state.xml
[2025-07-27 20:14:59] -rw------- 1 boinc boinc    378184 Jul 27 20:14 log.45758383._000120.job.log.tgz.1
[2025-07-27 20:14:59] -rw------- 1 boinc boinc      7781 Jul 27 20:14 heartbeat.json
[2025-07-27 20:14:59] -rw-r--r-- 1 boinc boinc      8192 Jul 27 20:14 boinc_mmap_file
[2025-07-27 20:14:59] -rw-r--r-- 1 boinc boinc        27 Jul 27 20:14 wrapper_checkpoint.txt
[2025-07-27 20:14:59] -rw------- 1 boinc boinc        95 Jul 27 20:14 pilot_heartbeat.json
[2025-07-27 20:14:59] -rw------- 1 boinc boinc       747 Jul 27 20:14 pilotlog.txt
[2025-07-27 20:14:59] -rw------- 1 boinc boinc    518143 Jul 27 20:14 log.45758383._000120.job.log.1
[2025-07-27 20:14:59] -rw------- 1 boinc boinc       357 Jul 27 20:14 output.list
[2025-07-27 20:14:59] -rw-r--r-- 1 boinc boinc       620 Jul 27 20:14 runtime_log
[2025-07-27 20:14:59] -rw------- 1 boinc boinc    911360 Jul 27 20:14 result.tar.gz
[2025-07-27 20:14:59] -rw------- 1 boinc boinc       655 Jul 27 20:14 pi3KDmHM9z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqOULDmXlZ32m.diag
[2025-07-27 20:14:59] -rw-r--r-- 1 boinc boinc      8684 Jul 27 20:14 runtime_log.err
[2025-07-27 20:14:59] -rw-r--r-- 1 boinc boinc     21833 Jul 27 20:14 stderr.txt
[2025-07-27 20:14:59] HITS file was successfully produced:
[2025-07-27 20:14:59] -rw------- 1 boinc boinc 173633837 Jul 27 20:13 shared/HITS.pool.root.1
[2025-07-27 20:14:59]  *** Contents of shared directory: ***
[2025-07-27 20:14:59] total 407788
[2025-07-27 20:14:59] -rw-r--r-- 2 boinc boinc 242454575 Jul 27 18:44 ATLAS.root_0
[2025-07-27 20:14:59] -rw-r--r-- 2 boinc boinc    542879 Jul 27 18:44 input.tar.gz
[2025-07-27 20:14:59] -rw-r--r-- 2 boinc boinc     15095 Jul 27 18:44 start_atlas.sh
[2025-07-27 20:14:59] -rw------- 1 boinc boinc 173633837 Jul 27 20:13 HITS.pool.root.1
[2025-07-27 20:14:59] -rw------- 1 boinc boinc    911360 Jul 27 20:14 result.tar.gz
20:15:00 (3482332): run_atlas exited; CPU time 58261.924432
20:15:00 (3482332): called boinc_finish(0)

</stderr_txt>
]]>

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