Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:51:09 (2889006): wrapper (7.7.26015): starting
06:51:09 (2889006): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 06:51:09] Arguments: --nthreads 8
[2025-07-27 06:51:09] Threads: 8
[2025-07-27 06:51:09] Checking for CVMFS
[2025-07-27 06:51:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 06:51:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 06:51:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 06:51:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 06:51:10] 2.13.1.0 681289 14048 149172 148809 2 236 40158918 40960001 14708 16776704 0 36532247 99.894 19894214 48905 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 06:51:10] CVMFS is ok
[2025-07-27 06:51:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 06:51:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 06:51:10] Further information can be found at the LHC@home message board.
[2025-07-27 06:51:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 06:51:10] Checking for apptainer binary...
[2025-07-27 06:51:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 06:51:10] Running /usr/bin/apptainer --version
[2025-07-27 06:51:10] apptainer version 1.4.1-1.el9
[2025-07-27 06:51:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 06:51:10] c-212-14.aglt2.org
[2025-07-27 06:51:10] apptainer works
[2025-07-27 06:51:10] Set ATHENA_PROC_NUMBER=8
[2025-07-27 06:51:10] Set ATHENA_CORE_NUMBER=8
[2025-07-27 06:51:10] Starting ATLAS job with PandaID=6745939022
[2025-07-27 06:51:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 08:31:11]  *** The last 200 lines of the pilot log: ***
[2025-07-27 08:31:11]  mtime=0
[2025-07-27 08:31:11]  protocol_id=None
[2025-07-27 08:31:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 08:31:11]  replicas=None
[2025-07-27 08:31:11]  scope=mc23_13p6TeV
[2025-07-27 08:31:11]  status=None
[2025-07-27 08:31:11]  status_code=0
[2025-07-27 08:31:11]  storage_token=
[2025-07-27 08:31:11]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745939022/log.45758392._000075.job.log.tgz.1
[2025-07-27 08:31:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/a1/log.45758392._000075.job.log.tgz.1
[2025-07-27 08:31:11]  workdir=None
[2025-07-27 08:31:11] ]
[2025-07-27 08:31:11] 2025-07-27 12:30:27,180 | INFO     | transferring file log.45758392._000075.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745939022/log.45758392._000075.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 08:31:11] 2025-07-27 12:30:27,181 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745939022/log.45758392._000075.job.log.tgz.1 /tmp/boinchome/slots/1/log.45758392._000075.job
[2025-07-27 08:31:11] 2025-07-27 12:30:27,215 | INFO     | adding to output.list: log.45758392._000075.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/a1/log.45758392._000075.job.log.tg
[2025-07-27 08:31:11] 2025-07-27 12:30:27,216 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 08:31:11] 2025-07-27 12:30:27,216 | INFO     | summary of transferred files:
[2025-07-27 08:31:11] 2025-07-27 12:30:27,216 | INFO     |  -- lfn=log.45758392._000075.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 08:31:11] 2025-07-27 12:30:27,217 | INFO     | stage-out finished correctly
[2025-07-27 08:31:11] 2025-07-27 12:30:27,292 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 08:31:11] 2025-07-27 12:30:28,273 | INFO     | monitor loop #432: job 0:6745939022 is in state 'finished'
[2025-07-27 08:31:11] 2025-07-27 12:30:28,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:31:11] 2025-07-27 12:30:29,637 | INFO     | job 6745939022 has state=finished
[2025-07-27 08:31:11] 2025-07-27 12:30:29,637 | INFO     | preparing for final server update for job 6745939022 in state='finished'
[2025-07-27 08:31:11] 2025-07-27 12:30:29,638 | INFO     | this job has now completed (state=finished)
[2025-07-27 08:31:11] 2025-07-27 12:30:29,638 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 08:31:11] 2025-07-27 12:30:29,638 | INFO     | log transfer has been attempted: DONE
[2025-07-27 08:31:11] 2025-07-27 12:30:29,638 | INFO     | job 6745939022 has finished - writing final server update
[2025-07-27 08:31:11] 2025-07-27 12:30:29,639 | INFO     | total number of processed events: 400 (read)
[2025-07-27 08:31:11] 2025-07-27 12:30:29,646 | INFO     | executing command: lscpu
[2025-07-27 08:31:11] 2025-07-27 12:30:29,725 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 08:31:11] 2025-07-27 12:30:30,778 | INFO     | monitor loop #433: job 0:6745939022 is in state 'finished'
[2025-07-27 08:31:11] 2025-07-27 12:30:30,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:31:11] 2025-07-27 12:30:33,279 | INFO     | monitor loop #434: job 0:6745939022 is in state 'finished'
[2025-07-27 08:31:11] 2025-07-27 12:30:33,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:31:11] 2025-07-27 12:30:35,785 | INFO     | monitor loop #435: job 0:6745939022 is in state 'finished'
[2025-07-27 08:31:11] 2025-07-27 12:30:35,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:31:11] 2025-07-27 12:30:37,077 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 08:31:11] 2025-07-27 12:30:37,083 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2871.803322916667
[2025-07-27 08:31:11] 2025-07-27 12:30:37,097 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745939022/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 08:31:11] 2025-07-27 12:30:37,098 | INFO     | extracted standard info from prmon json
[2025-07-27 08:31:11] 2025-07-27 12:30:37,098 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 08:31:11] 2025-07-27 12:30:37,098 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 08:31:11] 2025-07-27 12:30:37,098 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 08:31:11] 2025-07-27 12:30:37,099 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 08:31:11] 2025-07-27 12:30:37,100 | INFO     | fitting pss+swap vs Time
[2025-07-27 08:31:11] 2025-07-27 12:30:37,101 | INFO     | sum of square deviations: 226022842.5
[2025-07-27 08:31:11] 2025-07-27 12:30:37,101 | INFO     | sum of deviations: -1808827021.9999995
[2025-07-27 08:31:11] 2025-07-27 12:30:37,101 | INFO     | mean x: 1753616539.5
[2025-07-27 08:31:11] 2025-07-27 12:30:37,101 | INFO     | mean y: 2549854.777777778
[2025-07-27 08:31:11] 2025-07-27 12:30:37,101 | INFO     | -- intersect: 14036480884.884745
[2025-07-27 08:31:11] 2025-07-27 12:30:37,101 | INFO     | intersect: 14036480884.884745
[2025-07-27 08:31:11] 2025-07-27 12:30:37,101 | INFO     | chi2: 0.03442287248463832
[2025-07-27 08:31:11] 2025-07-27 12:30:37,101 | INFO     | -- intersect: 14036480884.884745
[2025-07-27 08:31:11] 2025-07-27 12:30:37,101 | INFO     | current memory leak: -8.00 B/s (using 90 data points, chi2=0.03)
[2025-07-27 08:31:11] 2025-07-27 12:30:37,102 | INFO     | could have reported an average CPU frequency of 2877 MHz (7 samples)
[2025-07-27 08:31:11] 2025-07-27 12:30:37,102 | INFO     | ..............................
[2025-07-27 08:31:11] 2025-07-27 12:30:37,102 | INFO     | . Timing measurements:
[2025-07-27 08:31:11] 2025-07-27 12:30:37,102 | INFO     | . get job = 0 s
[2025-07-27 08:31:11] 2025-07-27 12:30:37,102 | INFO     | . initial setup = 2 s
[2025-07-27 08:31:11] 2025-07-27 12:30:37,102 | INFO     | . payload setup = 10 s
[2025-07-27 08:31:11] 2025-07-27 12:30:37,102 | INFO     | . stage-in = 0 s
[2025-07-27 08:31:11] 2025-07-27 12:30:37,102 | INFO     | . payload execution = 5908 s
[2025-07-27 08:31:11] 2025-07-27 12:30:37,102 | INFO     | . stage-out = 0 s
[2025-07-27 08:31:11] 2025-07-27 12:30:37,102 | INFO     | . log creation = 0 s
[2025-07-27 08:31:11] 2025-07-27 12:30:37,102 | INFO     | ..............................
[2025-07-27 08:31:11] 2025-07-27 12:30:37,622 | INFO     | 
[2025-07-27 08:31:11] 2025-07-27 12:30:37,622 | INFO     | job summary report
[2025-07-27 08:31:11] 2025-07-27 12:30:37,622 | INFO     | --------------------------------------------------
[2025-07-27 08:31:11] 2025-07-27 12:30:37,622 | INFO     | PanDA job id: 6745939022
[2025-07-27 08:31:11] 2025-07-27 12:30:37,622 | INFO     | task id: 45758392
[2025-07-27 08:31:11] 2025-07-27 12:30:37,622 | INFO     | errors: (none)
[2025-07-27 08:31:11] 2025-07-27 12:30:37,623 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 08:31:11] 2025-07-27 12:30:37,623 | INFO     | pilot state: finished 
[2025-07-27 08:31:11] 2025-07-27 12:30:37,623 | INFO     | transexitcode: 0
[2025-07-27 08:31:11] 2025-07-27 12:30:37,623 | INFO     | exeerrorcode: 0
[2025-07-27 08:31:11] 2025-07-27 12:30:37,623 | INFO     | exeerrordiag: 
[2025-07-27 08:31:11] 2025-07-27 12:30:37,623 | INFO     | exitcode: 0
[2025-07-27 08:31:11] 2025-07-27 12:30:37,623 | INFO     | exitmsg: OK
[2025-07-27 08:31:11] 2025-07-27 12:30:37,623 | INFO     | cpuconsumptiontime: 43084 s
[2025-07-27 08:31:11] 2025-07-27 12:30:37,623 | INFO     | nevents: 400
[2025-07-27 08:31:11] 2025-07-27 12:30:37,623 | INFO     | neventsw: 0
[2025-07-27 08:31:11] 2025-07-27 12:30:37,623 | INFO     | pid: 2900304
[2025-07-27 08:31:11] 2025-07-27 12:30:37,623 | INFO     | pgrp: 2900304
[2025-07-27 08:31:11] 2025-07-27 12:30:37,624 | INFO     | corecount: 8
[2025-07-27 08:31:11] 2025-07-27 12:30:37,624 | INFO     | event service: False
[2025-07-27 08:31:11] 2025-07-27 12:30:37,624 | INFO     | sizes: {0: 2397464, 7: 2397726, 11: 2397754, 5923: 2424344, 5924: 2433398, 5934: 2433536}
[2025-07-27 08:31:11] 2025-07-27 12:30:37,624 | INFO     | --------------------------------------------------
[2025-07-27 08:31:11] 2025-07-27 12:30:37,624 | INFO     | 
[2025-07-27 08:31:11] 2025-07-27 12:30:37,624 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 08:31:11] 2025-07-27 12:30:37,665 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,665 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,665 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,665 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,665 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,666 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,666 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,666 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,666 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,666 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,666 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,666 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,666 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,666 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,666 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,666 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,666 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,666 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 08:31:11] 2025-07-27 12:30:37,667 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,667 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 08:31:11] 2025-07-27 12:30:37,667 | INFO     | job 6745939022 has completed (purged errors)
[2025-07-27 08:31:11] 2025-07-27 12:30:37,667 | INFO     | overall cleanup function is called
[2025-07-27 08:31:11] 2025-07-27 12:30:38,676 | INFO     | --- collectZombieJob: --- 10, [2900304]
[2025-07-27 08:31:11] 2025-07-27 12:30:38,676 | INFO     | zombie collector waiting for pid 2900304
[2025-07-27 08:31:11] 2025-07-27 12:30:38,677 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 08:31:11] 2025-07-27 12:30:38,677 | INFO     | collected zombie processes
[2025-07-27 08:31:11] 2025-07-27 12:30:38,677 | INFO     | will attempt to kill all subprocesses of pid=2900304
[2025-07-27 08:31:11] 2025-07-27 12:30:39,011 | INFO     | process IDs to be killed: [2900304] (in reverse order)
[2025-07-27 08:31:11] 2025-07-27 12:30:39,125 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 08:31:11] 2025-07-27 12:30:39,125 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 08:31:11] 2025-07-27 12:30:39,138 | INFO     | did not find any defunct processes belonging to 2900304
[2025-07-27 08:31:11] 2025-07-27 12:30:39,151 | INFO     | did not find any defunct processes belonging to 2900304
[2025-07-27 08:31:11] 2025-07-27 12:30:39,151 | INFO     | ready for new job
[2025-07-27 08:31:11] 2025-07-27 12:30:39,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 08:31:11] 2025-07-27 12:30:39,152 | INFO     | ***************************************
[2025-07-27 08:31:11] 2025-07-27 12:30:39,152 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 08:31:11] 2025-07-27 12:30:39,153 | INFO     | ***************************************
[2025-07-27 08:31:11] 2025-07-27 12:30:39,153 | INFO     | 
[2025-07-27 08:31:11] 2025-07-27 12:30:39,157 | INFO     | architecture information:
[2025-07-27 08:31:11] 2025-07-27 12:30:39,157 | INFO     | executing command: cat /etc/os-release
[2025-07-27 08:31:11] 2025-07-27 12:30:39,182 | INFO     | cat /etc/os-release:
[2025-07-27 08:31:11] NAME="CentOS Linux"
[2025-07-27 08:31:11] VERSION="7 (Core)"
[2025-07-27 08:31:11] ID="centos"
[2025-07-27 08:31:11] ID_LIKE="rhel fedora"
[2025-07-27 08:31:11] VERSION_ID="7"
[2025-07-27 08:31:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 08:31:11] ANSI_COLOR="0;31"
[2025-07-27 08:31:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 08:31:11] HOME_URL="https://www.centos.org/"
[2025-07-27 08:31:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 08:31:11] 
[2025-07-27 08:31:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 08:31:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 08:31:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 08:31:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 08:31:11] 
[2025-07-27 08:31:11] 2025-07-27 12:30:39,182 | INFO     | ***************************************
[2025-07-27 08:31:11] 2025-07-27 12:30:39,685 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 08:31:11] 2025-07-27 12:30:39,718 | INFO     | sufficient remaining disk space (128718995456 B)
[2025-07-27 08:31:11] 2025-07-27 12:30:39,719 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 08:31:11] 2025-07-27 12:30:39,719 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 08:31:11] 2025-07-27 12:30:39,719 | INFO     | update_server=False
[2025-07-27 08:31:11] 2025-07-27 12:30:39,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 08:31:11] 2025-07-27 12:30:39,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:31:11] 2025-07-27 12:30:39,720 | INFO     | aborting loop
[2025-07-27 08:31:11] 2025-07-27 12:30:40,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 08:31:11] 2025-07-27 12:30:40,398 | INFO     | all payload control threads have been joined
[2025-07-27 08:31:11] 2025-07-27 12:30:40,446 | INFO     | all data control threads have been joined
[2025-07-27 08:31:11] 2025-07-27 12:30:40,563 | INFO     | all job control threads have been joined
[2025-07-27 08:31:11] 2025-07-27 12:30:40,724 | INFO     | [job] retrieve thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:40,725 | INFO     | [job] job monitor thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:41,050 | INFO     | [payload] failed_post thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:41,144 | INFO     | [data] copytool_in thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:41,339 | INFO     | [job] validate thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:41,364 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:41,389 | INFO     | [payload] validate_post thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:41,406 | INFO     | [payload] control thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:41,453 | INFO     | [data] control thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:41,569 | INFO     | [job] control thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:41,725 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:41,779 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:41,960 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:42,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:31:11] 2025-07-27 12:30:42,317 | INFO     | [data] copytool_out thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:42,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 08:31:11] 2025-07-27 12:30:43,193 | INFO     | [job] queue monitor thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:46,422 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 08:31:11] 2025-07-27 12:30:46,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140527664387904)>', '<ExcThread(monitor, started 140526900737792)>']
[2025-07-27 08:31:11] 2025-07-27 12:30:51,813 | INFO     | all workflow threads have been joined
[2025-07-27 08:31:11] 2025-07-27 12:30:51,813 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 08:31:11] 2025-07-27 12:30:51,814 | INFO     | traces error code: 0
[2025-07-27 08:31:11] 2025-07-27 12:30:51,814 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 08:31:11] 2025-07-27 12:31:11,009 | INFO     | PID=2892646 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 08:31:11] 2025-07-27 12:31:11,009 | INFO     | .. there are 14 such processes running
[2025-07-27 08:31:11] 2025-07-27 12:31:11,009 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 08:31:11] 2025-07-27 12:31:11,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 08:31:11] 2025-07-27 12:31:11,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 08:31:11] 2025-07-27 12:31:11,009 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 08:31:11] 2025-07-27 12:31:11,009 | INFO     | [monitor] control thread has ended
[2025-07-27 08:31:11] 2025-07-27 12:31:11,133 [wrapper] ==== pilot stdout END ====
[2025-07-27 08:31:11] 2025-07-27 12:31:11,136 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 08:31:11] 2025-07-27 12:31:11,139 [wrapper] pilotpid: 2892646
[2025-07-27 08:31:11] 2025-07-27 12:31:11,141 [wrapper] Pilot exit status: 0
[2025-07-27 08:31:11] 2025-07-27 12:31:11,156 [wrapper] pandaids: 6745939022
[2025-07-27 08:31:11] 2025-07-27 12:31:11,248 [wrapper] cleanup supervisor_pilot 3049583 2892647
[2025-07-27 08:31:11] 2025-07-27 12:31:11,254 [wrapper] Test setup, not cleaning
[2025-07-27 08:31:11] 2025-07-27 12:31:11,259 [wrapper] apfmon messages muted
[2025-07-27 08:31:11] 2025-07-27 12:31:11,262 [wrapper] ==== wrapper stdout END ====
[2025-07-27 08:31:11] 2025-07-27 12:31:11,265 [wrapper] ==== wrapper stderr END ====
[2025-07-27 08:31:11]  *** Error codes and diagnostics ***
[2025-07-27 08:31:11]     "exeErrorCode": 0,
[2025-07-27 08:31:11]     "exeErrorDiag": "",
[2025-07-27 08:31:11]     "pilotErrorCode": 0,
[2025-07-27 08:31:11]     "pilotErrorDiag": "",
[2025-07-27 08:31:11]  *** Listing of results directory ***
[2025-07-27 08:31:11] total 406440
[2025-07-27 08:31:11] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 20:36 pilot3.tar.gz
[2025-07-27 08:31:11] -rwx------. 1 boincer umatlas     36292 Jul 26 21:05 runpilot2-wrapper.sh
[2025-07-27 08:31:11] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:05 queuedata.json
[2025-07-27 08:31:11] -rw-r--r--. 1 boincer umatlas       100 Jul 27 06:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 08:31:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 06:51 run_atlas
[2025-07-27 08:31:11] -rw-r--r--. 1 boincer umatlas       105 Jul 27 06:51 job.xml
[2025-07-27 08:31:11] -rw-r--r--. 2 boincer umatlas 236631228 Jul 27 06:51 EVNT.45758390._000003.pool.root.1
[2025-07-27 08:31:11] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 06:51 start_atlas.sh
[2025-07-27 08:31:11] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 06:51 shared
[2025-07-27 08:31:11] -rw-r--r--. 2 boincer umatlas    542880 Jul 27 06:51 input.tar.gz
[2025-07-27 08:31:11] -rw-r--r--. 1 boincer umatlas         0 Jul 27 06:51 boinc_lockfile
[2025-07-27 08:31:11] -rw-r--r--. 1 boincer umatlas      2557 Jul 27 06:51 pandaJob.out
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas    980117 Jul 27 06:51 agis_schedconf.cvmfs.json
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas   1593052 Jul 27 06:51 agis_ddmendpoints.agis.ALL.json
[2025-07-27 08:31:11] drwx------. 4 boincer umatlas      4096 Jul 27 06:51 pilot3
[2025-07-27 08:31:11] -rw-r--r--. 1 boincer umatlas      6944 Jul 27 08:20 init_data.xml
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas 173881128 Jul 27 08:29 HITS.45758392._000075.pool.root.1
[2025-07-27 08:31:11] -rw-r--r--. 1 boincer umatlas       529 Jul 27 08:29 boinc_task_state.xml
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas      1027 Jul 27 08:30 memory_monitor_summary.json
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas    331978 Jul 27 08:30 log.45758392._000075.job.log.tgz.1
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas        95 Jul 27 08:30 pilot_heartbeat.json
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas      7755 Jul 27 08:30 heartbeat.json
[2025-07-27 08:31:11] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 08:31 boinc_mmap_file
[2025-07-27 08:31:11] -rw-r--r--. 1 boincer umatlas        27 Jul 27 08:31 wrapper_checkpoint.txt
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas       823 Jul 27 08:31 pilotlog.txt
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas    567823 Jul 27 08:31 log.45758392._000075.job.log.1
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas       357 Jul 27 08:31 output.list
[2025-07-27 08:31:11] -rw-r--r--. 1 boincer umatlas       620 Jul 27 08:31 runtime_log
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas    921600 Jul 27 08:31 result.tar.gz
[2025-07-27 08:31:11] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 08:31 runtime_log.err
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas       652 Jul 27 08:31 qXkMDmp04z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZi1KDmFbcRBo.diag
[2025-07-27 08:31:11] -rw-r--r--. 1 boincer umatlas     21748 Jul 27 08:31 stderr.txt
[2025-07-27 08:31:11] HITS file was successfully produced:
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas 173881128 Jul 27 08:29 shared/HITS.pool.root.1
[2025-07-27 08:31:11]  *** Contents of shared directory: ***
[2025-07-27 08:31:11] total 402352
[2025-07-27 08:31:11] -rw-r--r--. 2 boincer umatlas 236631228 Jul 27 06:51 ATLAS.root_0
[2025-07-27 08:31:11] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 06:51 start_atlas.sh
[2025-07-27 08:31:11] -rw-r--r--. 2 boincer umatlas    542880 Jul 27 06:51 input.tar.gz
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas 173881128 Jul 27 08:29 HITS.pool.root.1
[2025-07-27 08:31:11] -rw-------. 1 boincer umatlas    921600 Jul 27 08:31 result.tar.gz
08:31:13 (2889006): run_atlas exited; CPU time 43182.464251
08:31:13 (2889006): called boinc_finish(0)

</stderr_txt>
]]>

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