Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:29:50 (3926142): wrapper (7.7.26015): starting
16:29:50 (3926142): wrapper: running run_atlas (--nthreads 12)
[2025-07-29 16:29:50] Arguments: --nthreads 12
[2025-07-29 16:29:50] Threads: 12
[2025-07-29 16:29:50] Checking for CVMFS
[2025-07-29 16:29:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-29 16:29:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-29 16:29:52] Running cvmfs_config stat atlas.cern.ch
[2025-07-29 16:29:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-29 16:29:55] 2.13.1.0 251212 10466 46724 148893 0 57 2809869 4096001 912 130560 0 9589105 99.985 386296 252 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-29 16:29:55] CVMFS is ok
[2025-07-29 16:29:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 16:29:55] Checking for apptainer binary...
[2025-07-29 16:29:55] apptainer is not installed, using version from CVMFS
[2025-07-29 16:29:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 16:29:58] martinpcalt
[2025-07-29 16:29:58] apptainer works
[2025-07-29 16:29:59] Set ATHENA_PROC_NUMBER=12
[2025-07-29 16:29:59] Set ATHENA_CORE_NUMBER=12
[2025-07-29 16:29:59] Starting ATLAS job with PandaID=6746065103
[2025-07-29 16:29:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 19:44:38]  *** The last 200 lines of the pilot log: ***
[2025-07-29 19:44:38] 2025-07-29 19:44:03,114 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-29 19:44:38] 2025-07-29 19:44:03,115 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 19:44:38] 2025-07-29 19:44:03,115 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 19:44:38] 2025-07-29 19:44:03,117 | INFO     | fitting pss+swap vs Time
[2025-07-29 19:44:38] 2025-07-29 19:44:03,117 | INFO     | sum of square deviations: 2027639878.0
[2025-07-29 19:44:38] 2025-07-29 19:44:03,118 | INFO     | sum of deviations: -27315261553.000008
[2025-07-29 19:44:38] 2025-07-29 19:44:03,118 | INFO     | mean x: 1753812509.0
[2025-07-29 19:44:38] 2025-07-29 19:44:03,118 | INFO     | mean y: 2695666.331550802
[2025-07-29 19:44:38] 2025-07-29 19:44:03,118 | INFO     | -- intersect: 23629103845.633587
[2025-07-29 19:44:38] 2025-07-29 19:44:03,118 | INFO     | intersect: 23629103845.633587
[2025-07-29 19:44:38] 2025-07-29 19:44:03,118 | INFO     | chi2: 4.133337442858522
[2025-07-29 19:44:38] 2025-07-29 19:44:03,119 | INFO     | sum of square deviations: 1869302025.5
[2025-07-29 19:44:38] 2025-07-29 19:44:03,119 | INFO     | sum of deviations: -930141694.5000107
[2025-07-29 19:44:38] 2025-07-29 19:44:03,119 | INFO     | mean x: 1753812356.5
[2025-07-29 19:44:38] 2025-07-29 19:44:03,119 | INFO     | mean y: 2720668.6978021977
[2025-07-29 19:44:38] 2025-07-29 19:44:03,119 | INFO     | -- intersect: 875396124.4865098
[2025-07-29 19:44:38] 2025-07-29 19:44:03,120 | INFO     | intersect: 875396124.4865098
[2025-07-29 19:44:38] 2025-07-29 19:44:03,128 | INFO     | chi2: 2.623828924894716
[2025-07-29 19:44:38] 2025-07-29 19:44:03,128 | INFO     | current chi2=2.623828924894716 (change=36.52033106011941 %)
[2025-07-29 19:44:38] 2025-07-29 19:44:03,128 | INFO     | sum of square deviations: 1719429448.0
[2025-07-29 19:44:38] 2025-07-29 19:44:03,129 | INFO     | sum of deviations: -409750481.00001895
[2025-07-29 19:44:38] 2025-07-29 19:44:03,129 | INFO     | mean x: 1753812204.0
[2025-07-29 19:44:38] 2025-07-29 19:44:03,129 | INFO     | mean y: 2721198.3333333335
[2025-07-29 19:44:38] 2025-07-29 19:44:03,129 | INFO     | -- intersect: 420665298.9235562
[2025-07-29 19:44:38] 2025-07-29 19:44:03,129 | INFO     | intersect: 420665298.9235562
[2025-07-29 19:44:38] 2025-07-29 19:44:03,129 | INFO     | chi2: 2.625232016336968
[2025-07-29 19:44:38] 2025-07-29 19:44:03,129 | INFO     | current chi2=2.625232016336968 (change=-0.05347495901654924 %)
[2025-07-29 19:44:38] 2025-07-29 19:44:03,130 | INFO     | right removable region: 176
[2025-07-29 19:44:38] 2025-07-29 19:44:03,130 | INFO     | sum of square deviations: 1869302025.5
[2025-07-29 19:44:38] 2025-07-29 19:44:03,130 | INFO     | sum of deviations: -71162974479.0
[2025-07-29 19:44:38] 2025-07-29 19:44:03,131 | INFO     | mean x: 1753812661.5
[2025-07-29 19:44:38] 2025-07-29 19:44:03,131 | INFO     | mean y: 2737588.6153846155
[2025-07-29 19:44:38] 2025-07-29 19:44:03,131 | INFO     | -- intersect: 66769115610.320244
[2025-07-29 19:44:38] 2025-07-29 19:44:03,131 | INFO     | intersect: 66769115610.320244
[2025-07-29 19:44:38] 2025-07-29 19:44:03,131 | INFO     | chi2: 1.9499292321146613
[2025-07-29 19:44:38] 2025-07-29 19:44:03,131 | INFO     | current chi2=1.9499292321146613 (change=52.82433967534635 %)
[2025-07-29 19:44:38] 2025-07-29 19:44:03,131 | INFO     | sum of square deviations: 1719429448.0
[2025-07-29 19:44:38] 2025-07-29 19:44:03,132 | INFO     | sum of deviations: -76819912874.0
[2025-07-29 19:44:38] 2025-07-29 19:44:03,132 | INFO     | mean x: 1753812814.0
[2025-07-29 19:44:38] 2025-07-29 19:44:03,132 | INFO     | mean y: 2743273.305084746
[2025-07-29 19:44:38] 2025-07-29 19:44:03,132 | INFO     | -- intersect: 78358821055.67465
[2025-07-29 19:44:38] 2025-07-29 19:44:03,132 | INFO     | intersect: 78358821055.67465
[2025-07-29 19:44:38] 2025-07-29 19:44:03,132 | INFO     | chi2: 1.8512288805967612
[2025-07-29 19:44:38] 2025-07-29 19:44:03,133 | INFO     | current chi2=1.8512288805967612 (change=5.061740184840527 %)
[2025-07-29 19:44:38] 2025-07-29 19:44:03,133 | INFO     | left removable region: 20
[2025-07-29 19:44:38] 2025-07-29 19:44:03,133 | INFO     | sum of square deviations: 1177156955.0
[2025-07-29 19:44:38] 2025-07-29 19:44:03,133 | INFO     | sum of deviations: -35816977373.49999
[2025-07-29 19:44:38] 2025-07-29 19:44:03,133 | INFO     | mean x: 1753812783.5
[2025-07-29 19:44:38] 2025-07-29 19:44:03,134 | INFO     | mean y: 2757671.891025641
[2025-07-29 19:44:38] 2025-07-29 19:44:03,134 | INFO     | -- intersect: 53365457112.404076
[2025-07-29 19:44:38] 2025-07-29 19:44:03,134 | INFO     | intersect: 53365457112.404076
[2025-07-29 19:44:38] 2025-07-29 19:44:03,134 | INFO     | chi2: 0.2362254047349758
[2025-07-29 19:44:38] 2025-07-29 19:44:03,134 | INFO     | -- intersect: 53365457112.404076
[2025-07-29 19:44:38] 2025-07-29 19:44:03,134 | INFO     | current memory leak: -30.43 B/s (using 156 data points, chi2=0.24)
[2025-07-29 19:44:38] 2025-07-29 19:44:03,134 | INFO     | could have reported an average CPU frequency of 4351 MHz (10 samples)
[2025-07-29 19:44:38] 2025-07-29 19:44:03,135 | INFO     | ..............................
[2025-07-29 19:44:38] 2025-07-29 19:44:03,135 | INFO     | . Timing measurements:
[2025-07-29 19:44:38] 2025-07-29 19:44:03,135 | INFO     | . get job = 0 s
[2025-07-29 19:44:38] 2025-07-29 19:44:03,135 | INFO     | . initial setup = 5 s
[2025-07-29 19:44:38] 2025-07-29 19:44:03,135 | INFO     | . payload setup = 55 s
[2025-07-29 19:44:38] 2025-07-29 19:44:03,135 | INFO     | . stage-in = 0 s
[2025-07-29 19:44:38] 2025-07-29 19:44:03,135 | INFO     | . payload execution = 11386 s
[2025-07-29 19:44:38] 2025-07-29 19:44:03,135 | INFO     | . stage-out = 3 s
[2025-07-29 19:44:38] 2025-07-29 19:44:03,135 | INFO     | . log creation = 0 s
[2025-07-29 19:44:38] 2025-07-29 19:44:03,135 | INFO     | ..............................
[2025-07-29 19:44:38] 2025-07-29 19:44:03,286 | INFO     | 
[2025-07-29 19:44:38] 2025-07-29 19:44:03,316 | INFO     | job summary report
[2025-07-29 19:44:38] 2025-07-29 19:44:03,316 | INFO     | --------------------------------------------------
[2025-07-29 19:44:38] 2025-07-29 19:44:03,316 | INFO     | PanDA job id: 6746065103
[2025-07-29 19:44:38] 2025-07-29 19:44:03,316 | INFO     | task id: 45759671
[2025-07-29 19:44:38] 2025-07-29 19:44:03,316 | INFO     | errors: (none)
[2025-07-29 19:44:38] 2025-07-29 19:44:03,316 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 19:44:38] 2025-07-29 19:44:03,316 | INFO     | pilot state: finished 
[2025-07-29 19:44:38] 2025-07-29 19:44:03,316 | INFO     | transexitcode: 0
[2025-07-29 19:44:38] 2025-07-29 19:44:03,316 | INFO     | exeerrorcode: 0
[2025-07-29 19:44:38] 2025-07-29 19:44:03,316 | INFO     | exeerrordiag: 
[2025-07-29 19:44:38] 2025-07-29 19:44:03,316 | INFO     | exitcode: 0
[2025-07-29 19:44:38] 2025-07-29 19:44:03,317 | INFO     | exitmsg: OK
[2025-07-29 19:44:38] 2025-07-29 19:44:03,317 | INFO     | cpuconsumptiontime: 41218 s
[2025-07-29 19:44:38] 2025-07-29 19:44:03,317 | INFO     | nevents: 400
[2025-07-29 19:44:38] 2025-07-29 19:44:03,317 | INFO     | neventsw: 0
[2025-07-29 19:44:38] 2025-07-29 19:44:03,317 | INFO     | pid: 3936291
[2025-07-29 19:44:38] 2025-07-29 19:44:03,317 | INFO     | pgrp: 3936291
[2025-07-29 19:44:38] 2025-07-29 19:44:03,317 | INFO     | corecount: 12
[2025-07-29 19:44:38] 2025-07-29 19:44:03,317 | INFO     | event service: False
[2025-07-29 19:44:38] 2025-07-29 19:44:03,317 | INFO     | sizes: {0: 2391750, 1: 2391949, 12: 2391949, 23: 2391977, 34: 2392005, 36: 2392295, 44: 2392451, 11444: 2421787, 11448: 2430831, 11449: 2430887, 11493: 2431109}
[2025-07-29 19:44:38] 2025-07-29 19:44:03,317 | INFO     | --------------------------------------------------
[2025-07-29 19:44:38] 2025-07-29 19:44:03,317 | INFO     | 
[2025-07-29 19:44:38] 2025-07-29 19:44:03,317 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-07-29 19:44:38] 2025-07-29 19:44:03,364 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,364 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,364 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,364 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,364 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,364 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,364 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,365 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,365 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,365 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,365 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,365 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,365 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,365 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,365 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,365 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,365 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,365 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 19:44:38] 2025-07-29 19:44:03,365 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,365 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 19:44:38] 2025-07-29 19:44:03,365 | INFO     | job 6746065103 has completed (purged errors)
[2025-07-29 19:44:38] 2025-07-29 19:44:03,366 | INFO     | overall cleanup function is called
[2025-07-29 19:44:38] 2025-07-29 19:44:04,392 | INFO     | --- collectZombieJob: --- 10, [3936291]
[2025-07-29 19:44:38] 2025-07-29 19:44:04,392 | INFO     | zombie collector waiting for pid 3936291
[2025-07-29 19:44:38] 2025-07-29 19:44:04,392 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 19:44:38] 2025-07-29 19:44:04,392 | INFO     | collected zombie processes
[2025-07-29 19:44:38] 2025-07-29 19:44:04,392 | INFO     | will attempt to kill all subprocesses of pid=3936291
[2025-07-29 19:44:38] 2025-07-29 19:44:04,619 | INFO     | process IDs to be killed: [3936291] (in reverse order)
[2025-07-29 19:44:38] 2025-07-29 19:44:04,672 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 19:44:38] 2025-07-29 19:44:04,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 19:44:38] 2025-07-29 19:44:04,674 | INFO     | did not find any defunct processes belonging to 3936291
[2025-07-29 19:44:38] 2025-07-29 19:44:04,675 | INFO     | did not find any defunct processes belonging to 3936291
[2025-07-29 19:44:38] 2025-07-29 19:44:04,675 | INFO     | ready for new job
[2025-07-29 19:44:38] 2025-07-29 19:44:04,675 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 19:44:38] 2025-07-29 19:44:04,700 | INFO     | ***************************************
[2025-07-29 19:44:38] 2025-07-29 19:44:04,700 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 19:44:38] 2025-07-29 19:44:04,700 | INFO     | ***************************************
[2025-07-29 19:44:38] 2025-07-29 19:44:04,700 | INFO     | 
[2025-07-29 19:44:38] 2025-07-29 19:44:04,728 | INFO     | architecture information:
[2025-07-29 19:44:38] 2025-07-29 19:44:04,728 | INFO     | executing command: cat /etc/os-release
[2025-07-29 19:44:38] 2025-07-29 19:44:04,800 | INFO     | cat /etc/os-release:
[2025-07-29 19:44:38] NAME="CentOS Linux"
[2025-07-29 19:44:38] VERSION="7 (Core)"
[2025-07-29 19:44:38] ID="centos"
[2025-07-29 19:44:38] ID_LIKE="rhel fedora"
[2025-07-29 19:44:38] VERSION_ID="7"
[2025-07-29 19:44:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 19:44:38] ANSI_COLOR="0;31"
[2025-07-29 19:44:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 19:44:38] HOME_URL="https://www.centos.org/"
[2025-07-29 19:44:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 19:44:38] 
[2025-07-29 19:44:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 19:44:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 19:44:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 19:44:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 19:44:38] 
[2025-07-29 19:44:38] 2025-07-29 19:44:04,800 | INFO     | ***************************************
[2025-07-29 19:44:38] 2025-07-29 19:44:05,304 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-07-29 19:44:38] 2025-07-29 19:44:05,409 | INFO     | sufficient remaining disk space (277149122560 B)
[2025-07-29 19:44:38] 2025-07-29 19:44:05,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 19:44:38] 2025-07-29 19:44:05,409 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 19:44:38] 2025-07-29 19:44:05,409 | INFO     | update_server=False
[2025-07-29 19:44:38] 2025-07-29 19:44:05,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 19:44:38] 2025-07-29 19:44:05,412 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 19:44:38] 2025-07-29 19:44:05,412 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 19:44:38] 2025-07-29 19:44:05,412 | INFO     | aborting loop
[2025-07-29 19:44:38] 2025-07-29 19:44:06,012 | INFO     | all job control threads have been joined
[2025-07-29 19:44:38] 2025-07-29 19:44:06,040 | INFO     | all data control threads have been joined
[2025-07-29 19:44:38] 2025-07-29 19:44:06,416 | INFO     | [job] retrieve thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:06,416 | INFO     | [job] job monitor thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:06,508 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:06,508 | INFO     | [job] validate thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:06,536 | INFO     | [data] copytool_in thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:06,644 | INFO     | [payload] failed_post thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:06,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 19:44:38] 2025-07-29 19:44:06,916 | INFO     | all payload control threads have been joined
[2025-07-29 19:44:38] 2025-07-29 19:44:07,000 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:07,016 | INFO     | [job] control thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:07,044 | INFO     | [data] control thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:07,044 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:07,312 | INFO     | [payload] validate_post thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:07,424 | INFO     | [data] copytool_out thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:07,920 | INFO     | [payload] control thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:08,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 19:44:38] 2025-07-29 19:44:09,308 | INFO     | [job] queue monitor thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:10,700 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:16,092 | INFO     | job.realtimelogging is not enabled
[2025-07-29 19:44:38] 2025-07-29 19:44:17,100 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 19:44:38] 2025-07-29 19:44:18,276 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139785285363520)>', '<ExcThread(monitor, started 139784844457728)>']
[2025-07-29 19:44:38] 2025-07-29 19:44:23,304 | INFO     | all workflow threads have been joined
[2025-07-29 19:44:38] 2025-07-29 19:44:23,304 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 19:44:38] 2025-07-29 19:44:23,304 | INFO     | traces error code: 0
[2025-07-29 19:44:38] 2025-07-29 19:44:23,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 19:44:38] 2025-07-29 19:44:35,578 | INFO     | PID=3929764 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-29 19:44:38] 2025-07-29 19:44:35,578 | INFO     | .. there are 2 such processes running
[2025-07-29 19:44:38] 2025-07-29 19:44:35,578 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 19:44:38] 2025-07-29 19:44:35,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 19:44:38] 2025-07-29 19:44:35,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 19:44:38] 2025-07-29 19:44:35,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 19:44:38] 2025-07-29 19:44:35,579 | INFO     | [monitor] control thread has ended
[2025-07-29 19:44:38] 2025-07-29 19:44:36,053 [wrapper] ==== pilot stdout END ====
[2025-07-29 19:44:38] 2025-07-29 19:44:36,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 19:44:38] 2025-07-29 19:44:36,084 [wrapper] pilotpid: 3929764
[2025-07-29 19:44:38] 2025-07-29 19:44:36,104 [wrapper] Pilot exit status: 0
[2025-07-29 19:44:38] 2025-07-29 19:44:36,288 [wrapper] pandaids: 6746065103
[2025-07-29 19:44:38] 2025-07-29 19:44:36,428 [wrapper] cleanup supervisor_pilot 3991992 3929765
[2025-07-29 19:44:38] 2025-07-29 19:44:36,445 [wrapper] Test setup, not cleaning
[2025-07-29 19:44:38] 2025-07-29 19:44:36,465 [wrapper] apfmon messages muted
[2025-07-29 19:44:38] 2025-07-29 19:44:36,484 [wrapper] ==== wrapper stdout END ====
[2025-07-29 19:44:38] 2025-07-29 19:44:36,536 [wrapper] ==== wrapper stderr END ====
[2025-07-29 19:44:38]  *** Error codes and diagnostics ***
[2025-07-29 19:44:38]     "exeErrorCode": 0,
[2025-07-29 19:44:38]     "exeErrorDiag": "",
[2025-07-29 19:44:38]     "pilotErrorCode": 0,
[2025-07-29 19:44:38]     "pilotErrorDiag": "",
[2025-07-29 19:44:38]  *** Listing of results directory ***
[2025-07-29 19:44:38] total 409100
[2025-07-29 19:44:38] -rw-r--r-- 1 boinc boinc    530466 Jul 27 05:26 pilot3.tar.gz
[2025-07-29 19:44:38] -rwx------ 1 boinc boinc     36292 Jul 27 05:29 runpilot2-wrapper.sh
[2025-07-29 19:44:38] -rw-r--r-- 1 boinc boinc      5112 Jul 27 05:29 queuedata.json
[2025-07-29 19:44:38] -rw-rw-r-- 1 boinc boinc       100 Jul 29 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 19:44:38] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 16:29 run_atlas
[2025-07-29 19:44:38] -rw-rw-r-- 1 boinc boinc       105 Jul 29 16:29 job.xml
[2025-07-29 19:44:38] -rw-rw-r-- 1 boinc boinc      9351 Jul 29 16:29 init_data.xml
[2025-07-29 19:44:38] -rw-r--r-- 2 boinc boinc 241581380 Jul 29 16:29 EVNT.45759667._000003.pool.root.1
[2025-07-29 19:44:38] drwxrwx--x 2 boinc boinc      4096 Jul 29 16:29 shared
[2025-07-29 19:44:38] -rw-r--r-- 2 boinc boinc    542889 Jul 29 16:29 input.tar.gz
[2025-07-29 19:44:38] -rw-r--r-- 2 boinc boinc     15095 Jul 29 16:29 start_atlas.sh
[2025-07-29 19:44:38] -rw-rw-r-- 1 boinc boinc         0 Jul 29 16:29 boinc_lockfile
[2025-07-29 19:44:38] -rw-rw-r-- 1 boinc boinc      2557 Jul 29 16:29 pandaJob.out
[2025-07-29 19:44:38] -rw------- 1 boinc boinc    977324 Jul 29 16:31 agis_schedconf.cvmfs.json
[2025-07-29 19:44:38] drwx------ 4 boinc boinc      4096 Jul 29 16:31 pilot3
[2025-07-29 19:44:38] -rw------- 1 boinc boinc 170387770 Jul 29 19:39 HITS.45759671._000054.pool.root.1
[2025-07-29 19:44:38] -rw-rw-r-- 1 boinc boinc       530 Jul 29 19:42 boinc_task_state.xml
[2025-07-29 19:44:38] -rw------- 1 boinc boinc      1041 Jul 29 19:43 memory_monitor_summary.json
[2025-07-29 19:44:38] -rw------- 1 boinc boinc   1589827 Jul 29 19:43 agis_ddmendpoints.agis.ALL.json
[2025-07-29 19:44:38] -rw------- 1 boinc boinc    420400 Jul 29 19:43 log.45759671._000054.job.log.tgz.1
[2025-07-29 19:44:38] -rw------- 1 boinc boinc      7816 Jul 29 19:44 heartbeat.json
[2025-07-29 19:44:38] -rw-rw-r-- 1 boinc boinc      8192 Jul 29 19:44 boinc_mmap_file
[2025-07-29 19:44:38] -rw-rw-r-- 1 boinc boinc        28 Jul 29 19:44 wrapper_checkpoint.txt
[2025-07-29 19:44:38] -rw------- 1 boinc boinc       822 Jul 29 19:44 pilotlog.txt
[2025-07-29 19:44:38] -rw------- 1 boinc boinc        95 Jul 29 19:44 pilot_heartbeat.json
[2025-07-29 19:44:38] -rw------- 1 boinc boinc   1117936 Jul 29 19:44 log.45759671._000054.job.log.1
[2025-07-29 19:44:38] -rw------- 1 boinc boinc       357 Jul 29 19:44 output.list
[2025-07-29 19:44:38] -rw-rw-r-- 1 boinc boinc       620 Jul 29 19:44 runtime_log
[2025-07-29 19:44:38] -rw------- 1 boinc boinc   1556480 Jul 29 19:44 result.tar.gz
[2025-07-29 19:44:38] -rw-rw-r-- 1 boinc boinc      8988 Jul 29 19:44 runtime_log.err
[2025-07-29 19:44:38] -rw------- 1 boinc boinc       662 Jul 29 19:44 Rj1NDm978z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRMULDmSPWWen.diag
[2025-07-29 19:44:38] -rw-rw-r-- 1 boinc boinc     20717 Jul 29 19:44 stderr.txt
[2025-07-29 19:44:38] HITS file was successfully produced:
[2025-07-29 19:44:38] -rw------- 1 boinc boinc 170387770 Jul 29 19:39 shared/HITS.pool.root.1
[2025-07-29 19:44:38]  *** Contents of shared directory: ***
[2025-07-29 19:44:38] total 404392
[2025-07-29 19:44:38] -rw-r--r-- 2 boinc boinc 241581380 Jul 29 16:29 ATLAS.root_0
[2025-07-29 19:44:38] -rw-r--r-- 2 boinc boinc    542889 Jul 29 16:29 input.tar.gz
[2025-07-29 19:44:38] -rw-r--r-- 2 boinc boinc     15095 Jul 29 16:29 start_atlas.sh
[2025-07-29 19:44:38] -rw------- 1 boinc boinc 170387770 Jul 29 19:39 HITS.pool.root.1
[2025-07-29 19:44:38] -rw------- 1 boinc boinc   1556480 Jul 29 19:44 result.tar.gz
19:44:40 (3926142): run_atlas exited; CPU time 41273.746614
19:44:40 (3926142): called boinc_finish(0)

</stderr_txt>
]]>

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