Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:32:47 (150455): wrapper (7.7.26015): starting
06:32:47 (150455): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 06:32:47] Arguments: --nthreads 8
[2025-07-27 06:32:47] Threads: 8
[2025-07-27 06:32:47] Checking for CVMFS
[2025-07-27 06:32:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 06:32:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 06:32:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 06:32:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 06:32:49] 2.12.6.0 870721 18265 428164 148809 1 149 31432404 32935936 18878 16776704 1 116154554 99.654 114772792 19821 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 06:32:49] CVMFS is ok
[2025-07-27 06:32:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 06:32:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 06:32:49] Further information can be found at the LHC@home message board.
[2025-07-27 06:32:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 06:32:49] Checking for apptainer binary...
[2025-07-27 06:32:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 06:32:49] Running /usr/bin/apptainer --version
[2025-07-27 06:32:49] apptainer version 1.4.1-1.el9
[2025-07-27 06:32:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 06:32:49] lc-10-11.aglt2.org
[2025-07-27 06:32:49] apptainer works
[2025-07-27 06:32:49] Set ATHENA_PROC_NUMBER=8
[2025-07-27 06:32:49] Set ATHENA_CORE_NUMBER=8
[2025-07-27 06:32:49] Starting ATLAS job with PandaID=6746137192
[2025-07-27 06:32:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 09:34:32]  *** The last 200 lines of the pilot log: ***
[2025-07-27 09:34:32] 2025-07-27 13:33:58,505 | INFO     | -- intersect: 20143056270.839603
[2025-07-27 09:34:32] 2025-07-27 13:33:58,505 | INFO     | intersect: 20143056270.839603
[2025-07-27 09:34:32] 2025-07-27 13:33:58,505 | INFO     | chi2: 2.5231051622165994
[2025-07-27 09:34:32] 2025-07-27 13:33:58,505 | INFO     | sum of square deviations: 1577782277.8604608
[2025-07-27 09:34:32] 2025-07-27 13:33:58,506 | INFO     | sum of deviations: -8707642532.767447
[2025-07-27 09:34:32] 2025-07-27 13:33:58,507 | INFO     | mean x: 1753617685.5813954
[2025-07-27 09:34:32] 2025-07-27 13:33:58,507 | INFO     | mean y: 2175987.197674419
[2025-07-27 09:34:32] 2025-07-27 13:33:58,507 | INFO     | -- intersect: 9680238771.556213
[2025-07-27 09:34:32] 2025-07-27 13:33:58,507 | INFO     | intersect: 9680238771.556213
[2025-07-27 09:34:32] 2025-07-27 13:33:58,507 | INFO     | chi2: 1.8702682737318417
[2025-07-27 09:34:32] 2025-07-27 13:33:58,508 | INFO     | current chi2=1.8702682737318417 (change=25.87434318081404 %)
[2025-07-27 09:34:32] 2025-07-27 13:33:58,508 | INFO     | sum of square deviations: 1444146832.8263497
[2025-07-27 09:34:32] 2025-07-27 13:33:58,509 | INFO     | sum of deviations: -8052128177.526947
[2025-07-27 09:34:32] 2025-07-27 13:33:58,509 | INFO     | mean x: 1753617533.0838323
[2025-07-27 09:34:32] 2025-07-27 13:33:58,509 | INFO     | mean y: 2176719.3233532934
[2025-07-27 09:34:32] 2025-07-27 13:33:58,509 | INFO     | -- intersect: 9779820397.781296
[2025-07-27 09:34:32] 2025-07-27 13:33:58,509 | INFO     | intersect: 9779820397.781296
[2025-07-27 09:34:32] 2025-07-27 13:33:58,510 | INFO     | chi2: 1.8687407768819917
[2025-07-27 09:34:32] 2025-07-27 13:33:58,510 | INFO     | current chi2=1.8687407768819917 (change=0.08167260661499075 %)
[2025-07-27 09:34:32] 2025-07-27 13:33:58,510 | INFO     | right removable region: 166
[2025-07-27 09:34:32] 2025-07-27 13:33:58,510 | INFO     | sum of square deviations: 1577773737.8604608
[2025-07-27 09:34:32] 2025-07-27 13:33:58,511 | INFO     | sum of deviations: -44650585411.27907
[2025-07-27 09:34:32] 2025-07-27 13:33:58,511 | INFO     | mean x: 1753617990.5813954
[2025-07-27 09:34:32] 2025-07-27 13:33:58,511 | INFO     | mean y: 2190872.4127906975
[2025-07-27 09:34:32] 2025-07-27 13:33:58,511 | INFO     | -- intersect: 49629122788.13154
[2025-07-27 09:34:32] 2025-07-27 13:33:58,511 | INFO     | intersect: 49629122788.13154
[2025-07-27 09:34:32] 2025-07-27 13:33:58,512 | INFO     | chi2: 1.0262283862079482
[2025-07-27 09:34:32] 2025-07-27 13:33:58,512 | INFO     | current chi2=1.0262283862079482 (change=59.32676918997758 %)
[2025-07-27 09:34:32] 2025-07-27 13:33:58,512 | INFO     | sum of square deviations: 1444139999.9880245
[2025-07-27 09:34:32] 2025-07-27 13:33:58,513 | INFO     | sum of deviations: -42796235408.07185
[2025-07-27 09:34:32] 2025-07-27 13:33:58,513 | INFO     | mean x: 1753618143.0778444
[2025-07-27 09:34:32] 2025-07-27 13:33:58,513 | INFO     | mean y: 2188693.4670658684
[2025-07-27 09:34:32] 2025-07-27 13:33:58,513 | INFO     | -- intersect: 51969625969.3874
[2025-07-27 09:34:32] 2025-07-27 13:33:58,513 | INFO     | intersect: 51969625969.3874
[2025-07-27 09:34:32] 2025-07-27 13:33:58,514 | INFO     | chi2: 1.0016322469184948
[2025-07-27 09:34:32] 2025-07-27 13:33:58,514 | INFO     | current chi2=1.0016322469184948 (change=2.396751017611139 %)
[2025-07-27 09:34:32] 2025-07-27 13:33:58,514 | INFO     | left removable region: 20
[2025-07-27 09:34:32] 2025-07-27 13:33:58,514 | INFO     | sum of square deviations: 964958189.513698
[2025-07-27 09:34:32] 2025-07-27 13:33:58,515 | INFO     | sum of deviations: -18869836261.16437
[2025-07-27 09:34:32] 2025-07-27 13:33:58,515 | INFO     | mean x: 1753618112.5821917
[2025-07-27 09:34:32] 2025-07-27 13:33:58,515 | INFO     | mean y: 2187191.01369863
[2025-07-27 09:34:32] 2025-07-27 13:33:58,515 | INFO     | -- intersect: 34294332704.29693
[2025-07-27 09:34:32] 2025-07-27 13:33:58,515 | INFO     | intersect: 34294332704.29693
[2025-07-27 09:34:32] 2025-07-27 13:33:58,515 | INFO     | chi2: 0.275634418836914
[2025-07-27 09:34:32] 2025-07-27 13:33:58,515 | INFO     | -- intersect: 34294332704.29693
[2025-07-27 09:34:32] 2025-07-27 13:33:58,515 | INFO     | current memory leak: -19.56 B/s (using 146 data points, chi2=0.28)
[2025-07-27 09:34:32] 2025-07-27 13:33:58,516 | INFO     | could have reported an average CPU frequency of 2376 MHz (9 samples)
[2025-07-27 09:34:32] 2025-07-27 13:33:58,516 | INFO     | ..............................
[2025-07-27 09:34:32] 2025-07-27 13:33:58,516 | INFO     | . Timing measurements:
[2025-07-27 09:34:32] 2025-07-27 13:33:58,516 | INFO     | . get job = 0 s
[2025-07-27 09:34:32] 2025-07-27 13:33:58,516 | INFO     | . initial setup = 3 s
[2025-07-27 09:34:32] 2025-07-27 13:33:58,517 | INFO     | . payload setup = 20 s
[2025-07-27 09:34:32] 2025-07-27 13:33:58,517 | INFO     | . stage-in = 0 s
[2025-07-27 09:34:32] 2025-07-27 13:33:58,517 | INFO     | . payload execution = 10757 s
[2025-07-27 09:34:32] 2025-07-27 13:33:58,517 | INFO     | . stage-out = 2 s
[2025-07-27 09:34:32] 2025-07-27 13:33:58,517 | INFO     | . log creation = 0 s
[2025-07-27 09:34:32] 2025-07-27 13:33:58,517 | INFO     | ..............................
[2025-07-27 09:34:32] 2025-07-27 13:33:58,525 | INFO     | sufficient remaining disk space (95660539904 B)
[2025-07-27 09:34:32] 2025-07-27 13:33:58,525 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 09:34:32] 2025-07-27 13:33:58,526 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6746137192: 3514209 B (within 2537553920 B limit)
[2025-07-27 09:34:32] 2025-07-27 13:33:58,527 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6746137192/HITS.45758383._000010.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 09:34:32] 2025-07-27 13:33:58,527 | INFO     | total size of present files: 0 B (workdir size: 3514209 B)
[2025-07-27 09:34:32] 2025-07-27 13:33:58,527 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6746137192/HITS.45758383._000010.pool.root.1 since it does not exist
[2025-07-27 09:34:32] 2025-07-27 13:33:58,715 | INFO     | 
[2025-07-27 09:34:32] 2025-07-27 13:33:58,716 | INFO     | job summary report
[2025-07-27 09:34:32] 2025-07-27 13:33:58,716 | INFO     | --------------------------------------------------
[2025-07-27 09:34:32] 2025-07-27 13:33:58,716 | INFO     | PanDA job id: 6746137192
[2025-07-27 09:34:32] 2025-07-27 13:33:58,716 | INFO     | task id: 45758383
[2025-07-27 09:34:32] 2025-07-27 13:33:58,716 | INFO     | errors: (none)
[2025-07-27 09:34:32] 2025-07-27 13:33:58,716 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 09:34:32] 2025-07-27 13:33:58,716 | INFO     | pilot state: finished 
[2025-07-27 09:34:32] 2025-07-27 13:33:58,716 | INFO     | transexitcode: 0
[2025-07-27 09:34:32] 2025-07-27 13:33:58,716 | INFO     | exeerrorcode: 0
[2025-07-27 09:34:32] 2025-07-27 13:33:58,716 | INFO     | exeerrordiag: 
[2025-07-27 09:34:32] 2025-07-27 13:33:58,717 | INFO     | exitcode: 0
[2025-07-27 09:34:32] 2025-07-27 13:33:58,717 | INFO     | exitmsg: OK
[2025-07-27 09:34:32] 2025-07-27 13:33:58,717 | INFO     | cpuconsumptiontime: 65346 s
[2025-07-27 09:34:32] 2025-07-27 13:33:58,717 | INFO     | nevents: 400
[2025-07-27 09:34:32] 2025-07-27 13:33:58,717 | INFO     | neventsw: 0
[2025-07-27 09:34:32] 2025-07-27 13:33:58,717 | INFO     | pid: 178993
[2025-07-27 09:34:32] 2025-07-27 13:33:58,717 | INFO     | pgrp: 178993
[2025-07-27 09:34:32] 2025-07-27 13:33:58,717 | INFO     | corecount: 8
[2025-07-27 09:34:32] 2025-07-27 13:33:58,717 | INFO     | event service: False
[2025-07-27 09:34:32] 2025-07-27 13:33:58,717 | INFO     | sizes: {0: 2397285, 1: 2397484, 12: 2397484, 15: 2397774, 23: 2397802, 10782: 2426926, 10786: 2435924, 10787: 2435980, 10804: 2436266}
[2025-07-27 09:34:32] 2025-07-27 13:33:58,717 | INFO     | --------------------------------------------------
[2025-07-27 09:34:32] 2025-07-27 13:33:58,717 | INFO     | 
[2025-07-27 09:34:32] 2025-07-27 13:33:58,718 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 09:34:32] 2025-07-27 13:33:58,797 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,798 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,798 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,798 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,798 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,798 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,798 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,798 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,798 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,799 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,799 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,799 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,799 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,799 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,799 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,799 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,799 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,800 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 09:34:32] 2025-07-27 13:33:58,801 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,801 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 09:34:32] 2025-07-27 13:33:58,801 | INFO     | job 6746137192 has completed (purged errors)
[2025-07-27 09:34:32] 2025-07-27 13:33:58,801 | INFO     | overall cleanup function is called
[2025-07-27 09:34:32] 2025-07-27 13:33:59,445 | INFO     | number of running child processes to parent process 178993: 1
[2025-07-27 09:34:32] 2025-07-27 13:33:59,445 | INFO     | maximum number of monitored processes: 6
[2025-07-27 09:34:32] 2025-07-27 13:33:59,445 | INFO     | aborting job monitoring since job object (job id=6746137192) has expired
[2025-07-27 09:34:32] 2025-07-27 13:33:59,849 | INFO     | --- collectZombieJob: --- 10, [178993]
[2025-07-27 09:34:32] 2025-07-27 13:33:59,851 | INFO     | zombie collector waiting for pid 178993
[2025-07-27 09:34:32] 2025-07-27 13:33:59,851 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 09:34:32] 2025-07-27 13:33:59,851 | INFO     | collected zombie processes
[2025-07-27 09:34:32] 2025-07-27 13:33:59,851 | INFO     | will attempt to kill all subprocesses of pid=178993
[2025-07-27 09:34:32] 2025-07-27 13:34:01,064 | INFO     | process IDs to be killed: [178993] (in reverse order)
[2025-07-27 09:34:32] 2025-07-27 13:34:01,267 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 09:34:32] 2025-07-27 13:34:01,267 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 09:34:32] 2025-07-27 13:34:01,306 | INFO     | did not find any defunct processes belonging to 178993
[2025-07-27 09:34:32] 2025-07-27 13:34:01,360 | INFO     | did not find any defunct processes belonging to 178993
[2025-07-27 09:34:32] 2025-07-27 13:34:01,361 | INFO     | ready for new job
[2025-07-27 09:34:32] 2025-07-27 13:34:01,361 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 09:34:32] 2025-07-27 13:34:01,365 | INFO     | ***************************************
[2025-07-27 09:34:32] 2025-07-27 13:34:01,368 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 09:34:32] 2025-07-27 13:34:01,368 | INFO     | ***************************************
[2025-07-27 09:34:32] 2025-07-27 13:34:01,368 | INFO     | 
[2025-07-27 09:34:32] 2025-07-27 13:34:01,389 | INFO     | architecture information:
[2025-07-27 09:34:32] 2025-07-27 13:34:01,390 | INFO     | executing command: cat /etc/os-release
[2025-07-27 09:34:32] 2025-07-27 13:34:01,441 | INFO     | cat /etc/os-release:
[2025-07-27 09:34:32] NAME="CentOS Linux"
[2025-07-27 09:34:32] VERSION="7 (Core)"
[2025-07-27 09:34:32] ID="centos"
[2025-07-27 09:34:32] ID_LIKE="rhel fedora"
[2025-07-27 09:34:32] VERSION_ID="7"
[2025-07-27 09:34:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 09:34:32] ANSI_COLOR="0;31"
[2025-07-27 09:34:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 09:34:32] HOME_URL="https://www.centos.org/"
[2025-07-27 09:34:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 09:34:32] 
[2025-07-27 09:34:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 09:34:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 09:34:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 09:34:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 09:34:32] 
[2025-07-27 09:34:32] 2025-07-27 13:34:01,442 | INFO     | ***************************************
[2025-07-27 09:34:32] 2025-07-27 13:34:01,945 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 09:34:32] 2025-07-27 13:34:01,982 | INFO     | sufficient remaining disk space (95664734208 B)
[2025-07-27 09:34:32] 2025-07-27 13:34:01,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 09:34:32] 2025-07-27 13:34:01,986 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 09:34:32] 2025-07-27 13:34:01,986 | INFO     | update_server=False
[2025-07-27 09:34:32] 2025-07-27 13:34:01,990 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 09:34:32] 2025-07-27 13:34:01,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 09:34:32] 2025-07-27 13:34:02,563 | INFO     | all data control threads have been joined
[2025-07-27 09:34:32] 2025-07-27 13:34:02,633 | INFO     | all job control threads have been joined
[2025-07-27 09:34:32] 2025-07-27 13:34:02,964 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:34:32] 2025-07-27 13:34:02,965 | INFO     | aborting loop
[2025-07-27 09:34:32] 2025-07-27 13:34:02,995 | INFO     | [job] retrieve thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:03,206 | INFO     | all payload control threads have been joined
[2025-07-27 09:34:32] 2025-07-27 13:34:03,266 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:03,282 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:03,341 | INFO     | [data] copytool_in thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:03,394 | INFO     | [job] validate thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:03,507 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:03,549 | INFO     | [payload] validate_post thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:03,569 | INFO     | [data] control thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:03,642 | INFO     | [job] control thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:03,730 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:34:32] 2025-07-27 13:34:03,971 | INFO     | [job] job monitor thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:03,997 | INFO     | [data] copytool_out thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:04,212 | INFO     | [payload] control thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:04,399 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:04,587 | INFO     | [payload] failed_post thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:04,738 | INFO     | [job] queue monitor thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:05,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 09:34:32] 2025-07-27 13:34:09,060 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 09:34:32] 2025-07-27 13:34:11,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870218647360)>', '<ExcThread(monitor, started 139869359695616)>']
[2025-07-27 09:34:32] 2025-07-27 13:34:16,166 | INFO     | all workflow threads have been joined
[2025-07-27 09:34:32] 2025-07-27 13:34:16,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 09:34:32] 2025-07-27 13:34:16,166 | INFO     | traces error code: 0
[2025-07-27 09:34:32] 2025-07-27 13:34:16,167 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 09:34:32] 2025-07-27 13:34:31,866 | INFO     | PID=156763 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 09:34:32] 2025-07-27 13:34:31,866 | INFO     | .. there are 26 such processes running
[2025-07-27 09:34:32] 2025-07-27 13:34:31,866 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 09:34:32] 2025-07-27 13:34:31,867 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 09:34:32] 2025-07-27 13:34:31,867 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 09:34:32] 2025-07-27 13:34:31,867 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 09:34:32] 2025-07-27 13:34:31,867 | INFO     | [monitor] control thread has ended
[2025-07-27 09:34:32] 2025-07-27 13:34:32,179 [wrapper] ==== pilot stdout END ====
[2025-07-27 09:34:32] 2025-07-27 13:34:32,192 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 09:34:32] 2025-07-27 13:34:32,226 [wrapper] pilotpid: 156763
[2025-07-27 09:34:32] 2025-07-27 13:34:32,231 [wrapper] Pilot exit status: 0
[2025-07-27 09:34:32] 2025-07-27 13:34:32,302 [wrapper] pandaids: 6746137192
[2025-07-27 09:34:32] 2025-07-27 13:34:32,459 [wrapper] cleanup supervisor_pilot 1524961 156764
[2025-07-27 09:34:32] 2025-07-27 13:34:32,464 [wrapper] Test setup, not cleaning
[2025-07-27 09:34:32] 2025-07-27 13:34:32,467 [wrapper] apfmon messages muted
[2025-07-27 09:34:32] 2025-07-27 13:34:32,471 [wrapper] ==== wrapper stdout END ====
[2025-07-27 09:34:32] 2025-07-27 13:34:32,478 [wrapper] ==== wrapper stderr END ====
[2025-07-27 09:34:32]  *** Error codes and diagnostics ***
[2025-07-27 09:34:32]     "exeErrorCode": 0,
[2025-07-27 09:34:32]     "exeErrorDiag": "",
[2025-07-27 09:34:32]     "pilotErrorCode": 0,
[2025-07-27 09:34:32]     "pilotErrorDiag": "",
[2025-07-27 09:34:32]  *** Listing of results directory ***
[2025-07-27 09:34:32] total 409832
[2025-07-27 09:34:32] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 01:26 pilot3.tar.gz
[2025-07-27 09:34:32] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 01:33 queuedata.json
[2025-07-27 09:34:32] -rwx------. 1 boincer umatlas     36292 Jul 27 01:34 runpilot2-wrapper.sh
[2025-07-27 09:34:32] -rw-r--r--. 1 boincer umatlas       100 Jul 27 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 09:34:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 06:32 run_atlas
[2025-07-27 09:34:32] -rw-r--r--. 1 boincer umatlas       105 Jul 27 06:32 job.xml
[2025-07-27 09:34:32] -rw-r--r--. 2 boincer umatlas 241359645 Jul 27 06:32 EVNT.45758381._000001.pool.root.1
[2025-07-27 09:34:32] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 06:32 shared
[2025-07-27 09:34:32] -rw-r--r--. 2 boincer umatlas    542876 Jul 27 06:32 input.tar.gz
[2025-07-27 09:34:32] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 06:32 start_atlas.sh
[2025-07-27 09:34:32] -rw-r--r--. 1 boincer umatlas         0 Jul 27 06:32 boinc_lockfile
[2025-07-27 09:34:32] -rw-r--r--. 1 boincer umatlas      2550 Jul 27 06:32 pandaJob.out
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas    980117 Jul 27 06:33 agis_schedconf.cvmfs.json
[2025-07-27 09:34:32] drwx------. 4 boincer umatlas      4096 Jul 27 06:33 pilot3
[2025-07-27 09:34:32] -rw-r--r--. 1 boincer umatlas      6865 Jul 27 09:29 init_data.xml
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas 171876186 Jul 27 09:32 HITS.45758383._000010.pool.root.1
[2025-07-27 09:34:32] -rw-r--r--. 1 boincer umatlas       530 Jul 27 09:33 boinc_task_state.xml
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas      1042 Jul 27 09:33 memory_monitor_summary.json
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas        95 Jul 27 09:33 pilot_heartbeat.json
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas   1593052 Jul 27 09:33 agis_ddmendpoints.agis.ALL.json
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas    359659 Jul 27 09:33 log.45758383._000010.job.log.tgz.1
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas      7815 Jul 27 09:33 heartbeat.json
[2025-07-27 09:34:32] -rw-r--r--. 1 boincer umatlas        28 Jul 27 09:34 wrapper_checkpoint.txt
[2025-07-27 09:34:32] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 09:34 boinc_mmap_file
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas       822 Jul 27 09:34 pilotlog.txt
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas    919586 Jul 27 09:34 log.45758383._000010.job.log.1
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas       357 Jul 27 09:34 output.list
[2025-07-27 09:34:32] -rw-r--r--. 1 boincer umatlas       620 Jul 27 09:34 runtime_log
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas   1300480 Jul 27 09:34 result.tar.gz
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas       656 Jul 27 09:34 yCpKDmoC9z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0MULDm19E5gn.diag
[2025-07-27 09:34:32] -rw-r--r--. 1 boincer umatlas      8661 Jul 27 09:34 runtime_log.err
[2025-07-27 09:34:32] -rw-r--r--. 1 boincer umatlas     21429 Jul 27 09:34 stderr.txt
[2025-07-27 09:34:32] HITS file was successfully produced:
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas 171876186 Jul 27 09:32 shared/HITS.pool.root.1
[2025-07-27 09:34:32]  *** Contents of shared directory: ***
[2025-07-27 09:34:32] total 405376
[2025-07-27 09:34:32] -rw-r--r--. 2 boincer umatlas 241359645 Jul 27 06:32 ATLAS.root_0
[2025-07-27 09:34:32] -rw-r--r--. 2 boincer umatlas    542876 Jul 27 06:32 input.tar.gz
[2025-07-27 09:34:32] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 06:32 start_atlas.sh
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas 171876186 Jul 27 09:32 HITS.pool.root.1
[2025-07-27 09:34:32] -rw-------. 1 boincer umatlas   1300480 Jul 27 09:34 result.tar.gz
09:34:54 (150455): run_atlas exited; CPU time 65956.139187
09:34:54 (150455): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN