Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:39:26 (1814632): wrapper (7.7.26015): starting
06:39:26 (1814632): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 06:39:26] Arguments: --nthreads 8
[2025-07-27 06:39:26] Threads: 8
[2025-07-27 06:39:26] Checking for CVMFS
[2025-07-27 06:39:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 06:39:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 06:39:26] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 06:39:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 06:39:27] 2.13.1.0 645510 14075 256608 148809 0 196 36980579 40960000 10574 16776704 0 45577860 99.775 41406860 36977 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 06:39:27] CVMFS is ok
[2025-07-27 06:39:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 06:39:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 06:39:27] Further information can be found at the LHC@home message board.
[2025-07-27 06:39:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 06:39:27] Checking for apptainer binary...
[2025-07-27 06:39:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 06:39:27] Running /usr/bin/apptainer --version
[2025-07-27 06:39:27] apptainer version 1.4.1-1.el9
[2025-07-27 06:39:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 06:39:27] c-212-5.aglt2.org
[2025-07-27 06:39:27] apptainer works
[2025-07-27 06:39:27] Set ATHENA_PROC_NUMBER=8
[2025-07-27 06:39:27] Set ATHENA_CORE_NUMBER=8
[2025-07-27 06:39:27] Starting ATLAS job with PandaID=6745907825
[2025-07-27 06:39:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 08:18:12]  *** The last 200 lines of the pilot log: ***
[2025-07-27 08:18:12]  protocol_id=None
[2025-07-27 08:18:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 08:18:12]  replicas=None
[2025-07-27 08:18:12]  scope=mc23_13p6TeV
[2025-07-27 08:18:12]  status=None
[2025-07-27 08:18:12]  status_code=0
[2025-07-27 08:18:12]  storage_token=
[2025-07-27 08:18:12]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6745907825/log.45758450._000086.job.log.tgz.1
[2025-07-27 08:18:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/f4/log.45758450._000086.job.log.tgz.1
[2025-07-27 08:18:12]  workdir=None
[2025-07-27 08:18:12] ]
[2025-07-27 08:18:12] 2025-07-27 12:17:32,450 | INFO     | transferring file log.45758450._000086.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6745907825/log.45758450._000086.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 08:18:12] 2025-07-27 12:17:32,450 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6745907825/log.45758450._000086.job.log.tgz.1 /tmp/boinchome/slots/5/log.45758450._000086.job
[2025-07-27 08:18:12] 2025-07-27 12:17:32,469 | INFO     | adding to output.list: log.45758450._000086.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/f4/log.45758450._000086.job.log.tg
[2025-07-27 08:18:12] 2025-07-27 12:17:32,470 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 08:18:12] 2025-07-27 12:17:32,470 | INFO     | summary of transferred files:
[2025-07-27 08:18:12] 2025-07-27 12:17:32,470 | INFO     |  -- lfn=log.45758450._000086.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 08:18:12] 2025-07-27 12:17:32,470 | INFO     | stage-out finished correctly
[2025-07-27 08:18:12] 2025-07-27 12:17:33,367 | INFO     | monitor loop #427: job 0:6745907825 is in state 'finished'
[2025-07-27 08:18:12] 2025-07-27 12:17:33,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:18:12] 2025-07-27 12:17:33,792 | INFO     | PID=1818871 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 08:18:12] 2025-07-27 12:17:33,792 | INFO     | .. there are 15 such processes running
[2025-07-27 08:18:12] 2025-07-27 12:17:35,477 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 08:18:12] 2025-07-27 12:17:35,872 | INFO     | monitor loop #428: job 0:6745907825 is in state 'finished'
[2025-07-27 08:18:12] 2025-07-27 12:17:35,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:18:12] 2025-07-27 12:17:36,115 | INFO     | job 6745907825 has state=finished
[2025-07-27 08:18:12] 2025-07-27 12:17:36,116 | INFO     | preparing for final server update for job 6745907825 in state='finished'
[2025-07-27 08:18:12] 2025-07-27 12:17:36,116 | INFO     | this job has now completed (state=finished)
[2025-07-27 08:18:12] 2025-07-27 12:17:36,116 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 08:18:12] 2025-07-27 12:17:36,116 | INFO     | log transfer has been attempted: DONE
[2025-07-27 08:18:12] 2025-07-27 12:17:36,116 | INFO     | job 6745907825 has finished - writing final server update
[2025-07-27 08:18:12] 2025-07-27 12:17:36,117 | INFO     | total number of processed events: 400 (read)
[2025-07-27 08:18:12] 2025-07-27 12:17:36,118 | INFO     | executing command: lscpu
[2025-07-27 08:18:12] 2025-07-27 12:17:36,183 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 08:18:12] 2025-07-27 12:17:38,375 | INFO     | monitor loop #429: job 0:6745907825 is in state 'finished'
[2025-07-27 08:18:12] 2025-07-27 12:17:38,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:18:12] 2025-07-27 12:17:40,593 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 08:18:12] 2025-07-27 12:17:40,598 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3244.6430729166677
[2025-07-27 08:18:12] 2025-07-27 12:17:40,608 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6745907825/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 08:18:12] 2025-07-27 12:17:40,608 | INFO     | extracted standard info from prmon json
[2025-07-27 08:18:12] 2025-07-27 12:17:40,608 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 08:18:12] 2025-07-27 12:17:40,608 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 08:18:12] 2025-07-27 12:17:40,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 08:18:12] 2025-07-27 12:17:40,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 08:18:12] 2025-07-27 12:17:40,610 | INFO     | fitting pss+swap vs Time
[2025-07-27 08:18:12] 2025-07-27 12:17:40,610 | INFO     | sum of square deviations: 218571540.0
[2025-07-27 08:18:12] 2025-07-27 12:17:40,610 | INFO     | sum of deviations: -1024267225.9999998
[2025-07-27 08:18:12] 2025-07-27 12:17:40,610 | INFO     | mean x: 1753615804.0
[2025-07-27 08:18:12] 2025-07-27 12:17:40,610 | INFO     | mean y: 2535843.370786517
[2025-07-27 08:18:12] 2025-07-27 12:17:40,610 | INFO     | -- intersect: 8220308363.218701
[2025-07-27 08:18:12] 2025-07-27 12:17:40,611 | INFO     | intersect: 8220308363.218701
[2025-07-27 08:18:12] 2025-07-27 12:17:40,611 | INFO     | chi2: 0.00689103018440829
[2025-07-27 08:18:12] 2025-07-27 12:17:40,611 | INFO     | -- intersect: 8220308363.218701
[2025-07-27 08:18:12] 2025-07-27 12:17:40,611 | INFO     | current memory leak: -4.69 B/s (using 89 data points, chi2=0.01)
[2025-07-27 08:18:12] 2025-07-27 12:17:40,611 | INFO     | could have reported an average CPU frequency of 3269 MHz (7 samples)
[2025-07-27 08:18:12] 2025-07-27 12:17:40,611 | INFO     | ..............................
[2025-07-27 08:18:12] 2025-07-27 12:17:40,611 | INFO     | . Timing measurements:
[2025-07-27 08:18:12] 2025-07-27 12:17:40,611 | INFO     | . get job = 0 s
[2025-07-27 08:18:12] 2025-07-27 12:17:40,611 | INFO     | . initial setup = 2 s
[2025-07-27 08:18:12] 2025-07-27 12:17:40,611 | INFO     | . payload setup = 9 s
[2025-07-27 08:18:12] 2025-07-27 12:17:40,611 | INFO     | . stage-in = 0 s
[2025-07-27 08:18:12] 2025-07-27 12:17:40,612 | INFO     | . payload execution = 5841 s
[2025-07-27 08:18:12] 2025-07-27 12:17:40,612 | INFO     | . stage-out = 0 s
[2025-07-27 08:18:12] 2025-07-27 12:17:40,612 | INFO     | . log creation = 0 s
[2025-07-27 08:18:12] 2025-07-27 12:17:40,612 | INFO     | ..............................
[2025-07-27 08:18:12] 2025-07-27 12:17:40,660 | INFO     | 
[2025-07-27 08:18:12] 2025-07-27 12:17:40,661 | INFO     | job summary report
[2025-07-27 08:18:12] 2025-07-27 12:17:40,661 | INFO     | --------------------------------------------------
[2025-07-27 08:18:12] 2025-07-27 12:17:40,662 | INFO     | PanDA job id: 6745907825
[2025-07-27 08:18:12] 2025-07-27 12:17:40,662 | INFO     | task id: 45758450
[2025-07-27 08:18:12] 2025-07-27 12:17:40,662 | INFO     | errors: (none)
[2025-07-27 08:18:12] 2025-07-27 12:17:40,662 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 08:18:12] 2025-07-27 12:17:40,662 | INFO     | pilot state: finished 
[2025-07-27 08:18:12] 2025-07-27 12:17:40,662 | INFO     | transexitcode: 0
[2025-07-27 08:18:12] 2025-07-27 12:17:40,662 | INFO     | exeerrorcode: 0
[2025-07-27 08:18:12] 2025-07-27 12:17:40,662 | INFO     | exeerrordiag: 
[2025-07-27 08:18:12] 2025-07-27 12:17:40,662 | INFO     | exitcode: 0
[2025-07-27 08:18:12] 2025-07-27 12:17:40,663 | INFO     | exitmsg: OK
[2025-07-27 08:18:12] 2025-07-27 12:17:40,663 | INFO     | cpuconsumptiontime: 42948 s
[2025-07-27 08:18:12] 2025-07-27 12:17:40,663 | INFO     | nevents: 400
[2025-07-27 08:18:12] 2025-07-27 12:17:40,663 | INFO     | neventsw: 0
[2025-07-27 08:18:12] 2025-07-27 12:17:40,663 | INFO     | pid: 1827432
[2025-07-27 08:18:12] 2025-07-27 12:17:40,663 | INFO     | pgrp: 1827432
[2025-07-27 08:18:12] 2025-07-27 12:17:40,663 | INFO     | corecount: 8
[2025-07-27 08:18:12] 2025-07-27 12:17:40,663 | INFO     | event service: False
[2025-07-27 08:18:12] 2025-07-27 12:17:40,663 | INFO     | sizes: {0: 2397459, 6: 2397721, 11: 2397749, 5854: 2433452, 5857: 2433452, 5863: 2433646}
[2025-07-27 08:18:12] 2025-07-27 12:17:40,663 | INFO     | --------------------------------------------------
[2025-07-27 08:18:12] 2025-07-27 12:17:40,663 | INFO     | 
[2025-07-27 08:18:12] 2025-07-27 12:17:40,663 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-07-27 08:18:12] 2025-07-27 12:17:40,680 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,680 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,680 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,680 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,680 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,681 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,681 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,681 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,681 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,681 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,681 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,681 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,681 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 08:18:12] 2025-07-27 12:17:40,682 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,682 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 08:18:12] 2025-07-27 12:17:40,682 | INFO     | job 6745907825 has completed (purged errors)
[2025-07-27 08:18:12] 2025-07-27 12:17:40,682 | INFO     | overall cleanup function is called
[2025-07-27 08:18:12] 2025-07-27 12:17:41,690 | INFO     | --- collectZombieJob: --- 10, [1827432]
[2025-07-27 08:18:12] 2025-07-27 12:17:41,690 | INFO     | zombie collector waiting for pid 1827432
[2025-07-27 08:18:12] 2025-07-27 12:17:41,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 08:18:12] 2025-07-27 12:17:41,691 | INFO     | collected zombie processes
[2025-07-27 08:18:12] 2025-07-27 12:17:41,691 | INFO     | will attempt to kill all subprocesses of pid=1827432
[2025-07-27 08:18:12] 2025-07-27 12:17:42,048 | INFO     | process IDs to be killed: [1827432] (in reverse order)
[2025-07-27 08:18:12] 2025-07-27 12:17:42,129 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 08:18:12] 2025-07-27 12:17:42,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 08:18:12] 2025-07-27 12:17:42,139 | INFO     | did not find any defunct processes belonging to 1827432
[2025-07-27 08:18:12] 2025-07-27 12:17:42,146 | INFO     | did not find any defunct processes belonging to 1827432
[2025-07-27 08:18:12] 2025-07-27 12:17:42,146 | INFO     | ready for new job
[2025-07-27 08:18:12] 2025-07-27 12:17:42,146 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 08:18:12] 2025-07-27 12:17:42,148 | INFO     | ***************************************
[2025-07-27 08:18:12] 2025-07-27 12:17:42,149 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 08:18:12] 2025-07-27 12:17:42,149 | INFO     | ***************************************
[2025-07-27 08:18:12] 2025-07-27 12:17:42,149 | INFO     | 
[2025-07-27 08:18:12] 2025-07-27 12:17:42,154 | INFO     | architecture information:
[2025-07-27 08:18:12] 2025-07-27 12:17:42,154 | INFO     | executing command: cat /etc/os-release
[2025-07-27 08:18:12] 2025-07-27 12:17:42,171 | INFO     | cat /etc/os-release:
[2025-07-27 08:18:12] NAME="CentOS Linux"
[2025-07-27 08:18:12] VERSION="7 (Core)"
[2025-07-27 08:18:12] ID="centos"
[2025-07-27 08:18:12] ID_LIKE="rhel fedora"
[2025-07-27 08:18:12] VERSION_ID="7"
[2025-07-27 08:18:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 08:18:12] ANSI_COLOR="0;31"
[2025-07-27 08:18:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 08:18:12] HOME_URL="https://www.centos.org/"
[2025-07-27 08:18:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 08:18:12] 
[2025-07-27 08:18:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 08:18:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 08:18:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 08:18:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 08:18:12] 
[2025-07-27 08:18:12] 2025-07-27 12:17:42,171 | INFO     | ***************************************
[2025-07-27 08:18:12] 2025-07-27 12:17:42,674 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-07-27 08:18:12] 2025-07-27 12:17:42,690 | INFO     | sufficient remaining disk space (123815854080 B)
[2025-07-27 08:18:12] 2025-07-27 12:17:42,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 08:18:12] 2025-07-27 12:17:42,691 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 08:18:12] 2025-07-27 12:17:42,691 | INFO     | update_server=False
[2025-07-27 08:18:12] 2025-07-27 12:17:42,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 08:18:12] 2025-07-27 12:17:42,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:18:12] 2025-07-27 12:17:42,691 | INFO     | aborting loop
[2025-07-27 08:18:12] 2025-07-27 12:17:43,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 08:18:12] 2025-07-27 12:17:43,305 | INFO     | all data control threads have been joined
[2025-07-27 08:18:12] 2025-07-27 12:17:43,320 | INFO     | all job control threads have been joined
[2025-07-27 08:18:12] 2025-07-27 12:17:43,603 | INFO     | all payload control threads have been joined
[2025-07-27 08:18:12] 2025-07-27 12:17:43,695 | INFO     | [job] retrieve thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:43,696 | INFO     | [job] job monitor thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:43,833 | INFO     | [payload] failed_post thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:43,869 | INFO     | [data] copytool_in thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:43,911 | INFO     | [job] validate thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:44,017 | INFO     | [payload] validate_post thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:44,080 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:44,206 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:44,310 | INFO     | [data] control thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:44,327 | INFO     | [job] control thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:44,609 | INFO     | [payload] control thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:44,762 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:45,047 | INFO     | [data] copytool_out thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:45,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:18:12] 2025-07-27 12:17:46,065 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 08:18:12] 2025-07-27 12:17:46,676 | INFO     | [job] queue monitor thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:50,067 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:53,493 | INFO     | job.realtimelogging is not enabled
[2025-07-27 08:18:12] 2025-07-27 12:17:54,498 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 08:18:12] 2025-07-27 12:17:55,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139754403419968)>', '<ExcThread(monitor, started 139753898878720)>']
[2025-07-27 08:18:12] 2025-07-27 12:18:00,247 | INFO     | all workflow threads have been joined
[2025-07-27 08:18:12] 2025-07-27 12:18:00,247 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 08:18:12] 2025-07-27 12:18:00,247 | INFO     | traces error code: 0
[2025-07-27 08:18:12] 2025-07-27 12:18:00,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 08:18:12] 2025-07-27 12:18:12,293 | INFO     | PID=1818871 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 08:18:12] 2025-07-27 12:18:12,293 | INFO     | .. there are 15 such processes running
[2025-07-27 08:18:12] 2025-07-27 12:18:12,294 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 08:18:12] 2025-07-27 12:18:12,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 08:18:12] 2025-07-27 12:18:12,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 08:18:12] 2025-07-27 12:18:12,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 08:18:12] 2025-07-27 12:18:12,294 | INFO     | [monitor] control thread has ended
[2025-07-27 08:18:12] 2025-07-27 12:18:12,401 [wrapper] ==== pilot stdout END ====
[2025-07-27 08:18:12] 2025-07-27 12:18:12,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 08:18:12] 2025-07-27 12:18:12,411 [wrapper] pilotpid: 1818871
[2025-07-27 08:18:12] 2025-07-27 12:18:12,417 [wrapper] Pilot exit status: 0
[2025-07-27 08:18:12] 2025-07-27 12:18:12,439 [wrapper] pandaids: 6745907825
[2025-07-27 08:18:12] 2025-07-27 12:18:12,537 [wrapper] cleanup supervisor_pilot 2162544 1818872
[2025-07-27 08:18:12] 2025-07-27 12:18:12,542 [wrapper] Test setup, not cleaning
[2025-07-27 08:18:12] 2025-07-27 12:18:12,548 [wrapper] apfmon messages muted
[2025-07-27 08:18:12] 2025-07-27 12:18:12,552 [wrapper] ==== wrapper stdout END ====
[2025-07-27 08:18:12] 2025-07-27 12:18:12,554 [wrapper] ==== wrapper stderr END ====
[2025-07-27 08:18:12]  *** Error codes and diagnostics ***
[2025-07-27 08:18:12]     "exeErrorCode": 0,
[2025-07-27 08:18:12]     "exeErrorDiag": "",
[2025-07-27 08:18:12]     "pilotErrorCode": 0,
[2025-07-27 08:18:12]     "pilotErrorDiag": "",
[2025-07-27 08:18:12]  *** Listing of results directory ***
[2025-07-27 08:18:12] total 403844
[2025-07-27 08:18:12] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 19:58 pilot3.tar.gz
[2025-07-27 08:18:12] -rwx------. 1 boincer umatlas     36292 Jul 26 20:08 runpilot2-wrapper.sh
[2025-07-27 08:18:12] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 20:08 queuedata.json
[2025-07-27 08:18:12] -rw-r--r--. 1 boincer umatlas       100 Jul 27 06:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 08:18:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 06:39 run_atlas
[2025-07-27 08:18:12] -rw-r--r--. 1 boincer umatlas       105 Jul 27 06:39 job.xml
[2025-07-27 08:18:12] -rw-r--r--. 2 boincer umatlas 234085622 Jul 27 06:39 EVNT.45758448._000004.pool.root.1
[2025-07-27 08:18:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 06:39 start_atlas.sh
[2025-07-27 08:18:12] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 06:39 shared
[2025-07-27 08:18:12] -rw-r--r--. 2 boincer umatlas    542877 Jul 27 06:39 input.tar.gz
[2025-07-27 08:18:12] -rw-r--r--. 1 boincer umatlas         0 Jul 27 06:39 boinc_lockfile
[2025-07-27 08:18:12] -rw-r--r--. 1 boincer umatlas      2552 Jul 27 06:39 pandaJob.out
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas    980117 Jul 27 06:39 agis_schedconf.cvmfs.json
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas   1593052 Jul 27 06:39 agis_ddmendpoints.agis.ALL.json
[2025-07-27 08:18:12] drwx------. 4 boincer umatlas      4096 Jul 27 06:39 pilot3
[2025-07-27 08:18:12] -rw-r--r--. 1 boincer umatlas      6945 Jul 27 08:12 init_data.xml
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas 173815036 Jul 27 08:17 HITS.45758450._000086.pool.root.1
[2025-07-27 08:18:12] -rw-r--r--. 1 boincer umatlas       529 Jul 27 08:17 boinc_task_state.xml
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas      1026 Jul 27 08:17 memory_monitor_summary.json
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas    314681 Jul 27 08:17 log.45758450._000086.job.log.tgz.1
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas      7748 Jul 27 08:17 heartbeat.json
[2025-07-27 08:18:12] -rw-r--r--. 1 boincer umatlas        27 Jul 27 08:18 wrapper_checkpoint.txt
[2025-07-27 08:18:12] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 08:18 boinc_mmap_file
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas       823 Jul 27 08:18 pilotlog.txt
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas        95 Jul 27 08:18 pilot_heartbeat.json
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas    562459 Jul 27 08:18 log.45758450._000086.job.log.1
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas       357 Jul 27 08:18 output.list
[2025-07-27 08:18:12] -rw-r--r--. 1 boincer umatlas       620 Jul 27 08:18 runtime_log
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas    901120 Jul 27 08:18 result.tar.gz
[2025-07-27 08:18:12] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 08:18 runtime_log.err
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas       651 Jul 27 08:18 hZlLDmv73z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDf1KDmc0jden.diag
[2025-07-27 08:18:12] -rw-r--r--. 1 boincer umatlas     21871 Jul 27 08:18 stderr.txt
[2025-07-27 08:18:12] HITS file was successfully produced:
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas 173815036 Jul 27 08:17 shared/HITS.pool.root.1
[2025-07-27 08:18:12]  *** Contents of shared directory: ***
[2025-07-27 08:18:12] total 399780
[2025-07-27 08:18:12] -rw-r--r--. 2 boincer umatlas 234085622 Jul 27 06:39 ATLAS.root_0
[2025-07-27 08:18:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 06:39 start_atlas.sh
[2025-07-27 08:18:12] -rw-r--r--. 2 boincer umatlas    542877 Jul 27 06:39 input.tar.gz
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas 173815036 Jul 27 08:17 HITS.pool.root.1
[2025-07-27 08:18:12] -rw-------. 1 boincer umatlas    901120 Jul 27 08:18 result.tar.gz
08:18:14 (1814632): run_atlas exited; CPU time 43096.480195
08:18:14 (1814632): called boinc_finish(0)

</stderr_txt>
]]>

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