Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-27 23:48:14 (22280): Detected: vboxwrapper 26206
2025-07-27 23:48:14 (22280): Detected: BOINC client v7.24.1
2025-07-27 23:48:15 (22280): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-07-27 23:48:15 (22280): Successfully copied 'init_data.xml' to the shared directory.
2025-07-27 23:48:16 (22280): Create VM. (boinc_8b4d6d1e731eb6ed, slot#0)
2025-07-27 23:48:16 (22280): Setting Memory Size for VM. (4800MB)
2025-07-27 23:48:16 (22280): Setting CPU Count for VM. (8)
2025-07-27 23:48:17 (22280): Setting Chipset Options for VM.
2025-07-27 23:48:17 (22280): Setting Graphics Controller Options for VM.
2025-07-27 23:48:17 (22280): Setting Boot Options for VM.
2025-07-27 23:48:17 (22280): Setting Network Configuration for NAT.
2025-07-27 23:48:18 (22280): Enabling VM Network Access.
2025-07-27 23:48:18 (22280): Disabling USB Support for VM.
2025-07-27 23:48:18 (22280): Disabling COM Port Support for VM.
2025-07-27 23:48:19 (22280): Disabling LPT Port Support for VM.
2025-07-27 23:48:19 (22280): Disabling Audio Support for VM.
2025-07-27 23:48:19 (22280): Disabling Clipboard Support for VM.
2025-07-27 23:48:19 (22280): Disabling Drag and Drop Support for VM.
2025-07-27 23:48:20 (22280): Adding storage controller(s) to VM.
2025-07-27 23:48:20 (22280): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-27 23:48:23 (22280): Adding VirtualBox Guest Additions to VM.
2025-07-27 23:48:23 (22280): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-27 23:48:23 (22280): forwarding host port 55859 to guest port 80
2025-07-27 23:48:24 (22280): Enabling remote desktop for VM.
2025-07-27 23:48:24 (22280): Required extension pack not installed, remote desktop not enabled.
2025-07-27 23:48:24 (22280): Enabling shared directory for VM.
2025-07-27 23:48:24 (22280): Starting VM using VBoxManage interface. (boinc_8b4d6d1e731eb6ed, slot#0)
2025-07-27 23:48:30 (22280): Successfully started VM. (PID = '5412')
2025-07-27 23:48:30 (22280): Reporting VM Process ID to BOINC.
2025-07-27 23:48:30 (22280): Guest Log: BIOS: VirtualBox 7.0.6
2025-07-27 23:48:30 (22280): Guest Log: CPUID EDX: 0x178bfbff
2025-07-27 23:48:30 (22280): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-27 23:48:30 (22280): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-27 23:48:30 (22280): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-27 23:48:30 (22280): Detected: Web Application Enabled (http://localhost:55859)
2025-07-27 23:48:30 (22280): Preference change detected
2025-07-27 23:48:30 (22280): Setting CPU throttle for VM. (100%)
2025-07-27 23:48:30 (22280): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-27 23:48:32 (22280): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-27 23:48:32 (22280): Guest Log: BIOS: Booting from Hard Disk...
2025-07-27 23:48:34 (22280): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-27 23:48:34 (22280): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-27 23:48:34 (22280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-27 23:48:44 (22280): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-27 23:48:44 (22280): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-27 23:48:56 (22280): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-27 23:48:56 (22280): Guest Log: 00:00:00.000397 main     Log opened 2025-07-27T23:48:54.870130000Z
2025-07-27 23:48:56 (22280): Guest Log: 00:00:00.000909 main     OS Product: Linux
2025-07-27 23:48:56 (22280): Guest Log: 00:00:00.001046 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-27 23:48:56 (22280): Guest Log: 00:00:00.001163 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-27 23:48:56 (22280): Guest Log: 00:00:00.001271 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-27 23:48:56 (22280): Guest Log: 00:00:00.001274 main     Process ID: 1369
2025-07-27 23:48:56 (22280): Guest Log: 00:00:00.001276 main     Package type: LINUX_64BITS_GENERIC
2025-07-27 23:48:56 (22280): Guest Log: 00:00:00.005917 main     5.2.32 r132073 started. Verbose level = 0
2025-07-27 23:48:56 (22280): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-27 23:48:56 (22280): Guest Log: [INFO] Mounting shared directory
2025-07-27 23:48:56 (22280): Guest Log: [INFO] Checking for init_data.xml
2025-07-27 23:49:03 (22280): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-27 23:49:03 (22280): Guest Log: [INFO] Detected branch: prod
2025-07-27 23:49:04 (22280): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-27 23:49:04 (22280): Guest Log: Copying input files
2025-07-27 23:49:05 (22280): Guest Log: Copied input files into RunAtlas.
2025-07-27 23:49:05 (22280): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-27 23:49:05 (22280): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-27 23:49:05 (22280): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-27 23:49:05 (22280): Guest Log: Further information can be found at the LHC@home message board.
2025-07-27 23:49:06 (22280): Guest Log: 00:00:10.013908 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 036 277 000ns (GuestNow=1 753 678 145 916 840 000 ns GuestLast=1 753 660 134 880 563 000 ns fSetTimeLastLoop=true )
2025-07-27 23:49:14 (22280): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-27 23:49:14 (22280): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-27 23:49:14 (22280): Guest Log: 2.6.3.0 1654 0 32184 148836 3 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-27 23:49:16 (22280): Guest Log: copied the webapp to /var/www
2025-07-27 23:49:16 (22280): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-27 23:49:16 (22280): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-27 23:49:16 (22280): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-27 23:49:16 (22280): Guest Log:  *** Starting ATLAS job. (PandaID=6745966231 taskID=45758930) ***
2025-07-28 01:28:40 (22280): Status Report: Elapsed Time: '6000.016975'
2025-07-28 01:28:40 (22280): Status Report: CPU Time: '40089.546875'
2025-07-28 02:40:59 (22280): Guest Log:  *** Job finished ***
2025-07-28 02:40:59 (22280): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:46,277 | INFO     | [payload] execute_payloads thread has finished
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:46,482 | INFO     | [data] copytool_out thread has finished
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:49,812 | INFO     | [data] queue_monitor thread has finished
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:50,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140102998574912)>', '<ExcThread(monitor, started 140102428780288)>']
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:51,896 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:51,896 | INFO     | [monitor] control thread has ended
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:55,954 | INFO     | all workflow threads have been joined
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:55,954 | INFO     | end of generic workflow (traces error code: 0)
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:55,954 | INFO     | traces error code: 0
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:55,954 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:56,057 [wrapper] ==== pilot stdout END ====
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:56,063 [wrapper] ==== wrapper stdout RESUME ====
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:56,070 [wrapper] pilotpid: 6021
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:56,076 [wrapper] Pilot exit status: 0
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:56,218 [wrapper] pandaids: 6745966231
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:56,261 [wrapper] cleanup supervisor_pilot  8472 6022
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:56,268 [wrapper] Test setup, not cleaning
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:56,277 [wrapper] apfmon messages muted
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:56,283 [wrapper] ==== wrapper stdout END ====
2025-07-28 02:40:59 (22280): Guest Log: 2025-07-28 07:40:56,288 [wrapper] ==== wrapper stderr END ====
2025-07-28 02:40:59 (22280): Guest Log:  *** Error codes and diagnostics ***
2025-07-28 02:40:59 (22280): Guest Log:     "exeErrorCode": 0,
2025-07-28 02:40:59 (22280): Guest Log:     "exeErrorDiag": "",
2025-07-28 02:40:59 (22280): Guest Log:     "pilotErrorCode": 0,
2025-07-28 02:40:59 (22280): Guest Log:     "pilotErrorDiag": "",
2025-07-28 02:40:59 (22280): Guest Log:  *** Listing of results directory ***
2025-07-28 02:40:59 (22280): Guest Log: total 178488
2025-07-28 02:40:59 (22280): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 27 02:38 pilot3.tar.gz
2025-07-28 02:40:59 (22280): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 27 03:00 runpilot2-wrapper.sh
2025-07-28 02:40:59 (22280): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 27 03:00 queuedata.json
2025-07-28 02:40:59 (22280): Guest Log: -rwxr-xr-x. 1 atlas atlas      6047 Jul 28 04:49 init_data.xml
2025-07-28 02:40:59 (22280): Guest Log: -rwxr-xr-x. 1 atlas atlas    542874 Jul 28 04:49 input.tar.gz
2025-07-28 02:40:59 (22280): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 28 04:49 start_atlas.sh
2025-07-28 02:40:59 (22280): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 28 04:49 EVNT.45758926._000005.pool.root.1 -> /data/./ATLAS.root_0
2025-07-28 02:40:59 (22280): Guest Log: -rw-r--r--. 1 atlas atlas      2556 Jul 28 04:49 pandaJob.out
2025-07-28 02:40:59 (22280): Guest Log: -rw-------. 1 atlas atlas    980125 Jul 28 04:50 agis_schedconf.cvmfs.json
2025-07-28 02:40:59 (22280): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 28 04:50 agis_ddmendpoints.agis.ALL.json
2025-07-28 02:40:59 (22280): Guest Log: drwx------. 4 atlas atlas      4096 Jul 28 04:50 pilot3
2025-07-28 02:40:59 (22280): Guest Log: -rw-------. 1 atlas atlas        95 Jul 28 07:39 pilot_heartbeat.json
2025-07-28 02:40:59 (22280): Guest Log: -rw-------. 1 atlas atlas 176567560 Jul 28 07:40 HITS.45758930._000118.pool.root.1
2025-07-28 02:40:59 (22280): Guest Log: -rw-------. 1 atlas atlas      1035 Jul 28 07:40 memory_monitor_summary.json
2025-07-28 02:40:59 (22280): Guest Log: -rw-------. 1 atlas atlas    355229 Jul 28 07:40 log.45758930._000118.job.log.tgz.1
2025-07-28 02:40:59 (22280): Guest Log: -rw-------. 1 atlas atlas      7837 Jul 28 07:40 heartbeat.json
2025-07-28 02:40:59 (22280): Guest Log: -rw-------. 1 atlas atlas      4540 Jul 28 07:40 pilotlog.txt
2025-07-28 02:40:59 (22280): Guest Log: -rw-------. 1 atlas atlas    840146 Jul 28 07:40 log.45758930._000118.job.log.1
2025-07-28 02:40:59 (22280): Guest Log: -rw-------. 1 atlas atlas       357 Jul 28 07:40 output.list
2025-07-28 02:40:59 (22280): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 28 07:40 runtime_log
2025-07-28 02:40:59 (22280): Guest Log: -rw-------. 1 atlas atlas   1218560 Jul 28 07:40 result.tar.gz
2025-07-28 02:40:59 (22280): Guest Log: -rw-r--r--. 1 atlas atlas      8594 Jul 28 07:40 runtime_log.err
2025-07-28 02:40:59 (22280): Guest Log: -rw-------. 1 atlas atlas       658 Jul 28 07:40 kN4KDm3n6z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmO0TLDmKtElGm.diag
2025-07-28 02:40:59 (22280): Guest Log: Looking for outputfile HITS.45758930._000118.pool.root.1
2025-07-28 02:40:59 (22280): Guest Log: HITS file was successfully produced
2025-07-28 02:40:59 (22280): Guest Log: -rw-------. 1 atlas atlas 176567560 Jul 28 07:40 /home/atlas/RunAtlas/HITS.45758930._000118.pool.root.1
2025-07-28 02:40:59 (22280): Guest Log: Successfully finished the ATLAS job!
2025-07-28 02:40:59 (22280): Guest Log: Copying the results back to the shared directory!
2025-07-28 02:40:59 (22280): Guest Log:  *** Contents of shared directory: ***
2025-07-28 02:40:59 (22280): Guest Log: total 406372
2025-07-28 02:40:59 (22280): Guest Log: -rwxrwxrwx. 1 root root 237764087 Jul 28 04:48 ATLAS.root_0
2025-07-28 02:40:59 (22280): Guest Log: -rwxrwxrwx. 1 root root 176567560 Jul 28 07:40 HITS.pool.root.1
2025-07-28 02:40:59 (22280): Guest Log: -rwxrwxrwx. 1 root root      6047 Jul 28 04:48 init_data.xml
2025-07-28 02:40:59 (22280): Guest Log: -rwxrwxrwx. 1 root root    542874 Jul 27 10:29 input.tar.gz
2025-07-28 02:40:59 (22280): Guest Log: -rwxrwxrwx. 1 root root   1218560 Jul 28 07:40 result.tar.gz
2025-07-28 02:40:59 (22280): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 27 10:29 start_atlas.sh
2025-07-28 02:40:59 (22280): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-28 02:40:59 (22280): VM Completion File Detected.
2025-07-28 02:40:59 (22280): Powering off VM.
2025-07-28 02:41:11 (22280): Guest Log: 02:52:08.531708 control  Guest control service stopped
2025-07-28 02:41:11 (22280): Guest Log: 02:52:08.568977 control  Guest control worker returned with rc=VINF_SUCCESS
2025-07-28 02:41:11 (22280): Guest Log: 02:52:08.569122 main     Session 0 is about to close ...
2025-07-28 02:41:11 (22280): Guest Log: 02:52:08.569170 main     Stopping all guest processes ...
2025-07-28 02:41:11 (22280): Guest Log: 02:52:08.569197 main     Closing all guest files ...
2025-07-28 02:41:11 (22280): Guest Log: 02:52:08.830672 main     Ended.
2025-07-28 02:41:11 (22280): Successfully stopped VM.
2025-07-28 02:41:11 (22280): Deregistering VM. (boinc_8b4d6d1e731eb6ed, slot#0)
2025-07-28 02:41:11 (22280): Removing network bandwidth throttle group from VM.
2025-07-28 02:41:11 (22280): Removing VM from VirtualBox.
02:41:17 (22280): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN