Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:43:36 (2134367): wrapper (7.7.26015): starting
07:43:36 (2134367): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 07:43:36] Arguments: --nthreads 12
[2025-07-27 07:43:36] Threads: 12
[2025-07-27 07:43:36] Checking for CVMFS
[2025-07-27 07:43:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 07:43:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 07:43:37] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 07:43:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 07:43:37] 2.12.6.0 418423 18320 311596 148811 2 65 22517017 32935937 7394 16776704 0 32581259 99.647 53610602 33433 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 07:43:37] CVMFS is ok
[2025-07-27 07:43:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 07:43:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 07:43:37] Further information can be found at the LHC@home message board.
[2025-07-27 07:43:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 07:43:37] Checking for apptainer binary...
[2025-07-27 07:43:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 07:43:37] Running /usr/bin/apptainer --version
[2025-07-27 07:43:37] apptainer version 1.4.1-1.el9
[2025-07-27 07:43:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 07:43:37] c6-1-26-2.aglt2.org
[2025-07-27 07:43:37] apptainer works
[2025-07-27 07:43:37] Set ATHENA_PROC_NUMBER=12
[2025-07-27 07:43:37] Set ATHENA_CORE_NUMBER=12
[2025-07-27 07:43:37] Starting ATLAS job with PandaID=6745966213
[2025-07-27 07:43:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 09:09:23]  *** The last 200 lines of the pilot log: ***
[2025-07-27 09:09:23]  is_tar=False
[2025-07-27 09:09:23]  lfn=log.45758930._000100.job.log.tgz.1
[2025-07-27 09:09:23]  mtime=0
[2025-07-27 09:09:23]  protocol_id=None
[2025-07-27 09:09:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 09:09:23]  replicas=None
[2025-07-27 09:09:23]  scope=mc23_13p6TeV
[2025-07-27 09:09:23]  status=None
[2025-07-27 09:09:23]  status_code=0
[2025-07-27 09:09:23]  storage_token=
[2025-07-27 09:09:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745966213/log.45758930._000100.job.log.tgz.1
[2025-07-27 09:09:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/57/log.45758930._000100.job.log.tgz.1
[2025-07-27 09:09:23]  workdir=None
[2025-07-27 09:09:23] ]
[2025-07-27 09:09:23] 2025-07-27 13:08:42,215 | INFO     | transferring file log.45758930._000100.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745966213/log.45758930._000100.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 09:09:23] 2025-07-27 13:08:42,215 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745966213/log.45758930._000100.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758930._000100.job
[2025-07-27 09:09:23] 2025-07-27 13:08:42,231 | INFO     | adding to output.list: log.45758930._000100.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/57/log.45758930._000100.job.log.tg
[2025-07-27 09:09:23] 2025-07-27 13:08:42,231 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 09:09:23] 2025-07-27 13:08:42,232 | INFO     | summary of transferred files:
[2025-07-27 09:09:23] 2025-07-27 13:08:42,232 | INFO     |  -- lfn=log.45758930._000100.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 09:09:23] 2025-07-27 13:08:42,232 | INFO     | stage-out finished correctly
[2025-07-27 09:09:23] 2025-07-27 13:08:42,419 | INFO     | monitor loop #377: job 0:6745966213 is in state 'finished'
[2025-07-27 09:09:23] 2025-07-27 13:08:42,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 09:09:23] 2025-07-27 13:08:42,975 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 09:09:23] 2025-07-27 13:08:44,922 | INFO     | monitor loop #378: job 0:6745966213 is in state 'finished'
[2025-07-27 09:09:23] 2025-07-27 13:08:44,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 09:09:23] 2025-07-27 13:08:45,961 | INFO     | job 6745966213 has state=finished
[2025-07-27 09:09:23] 2025-07-27 13:08:45,962 | INFO     | preparing for final server update for job 6745966213 in state='finished'
[2025-07-27 09:09:23] 2025-07-27 13:08:45,962 | INFO     | this job has now completed (state=finished)
[2025-07-27 09:09:23] 2025-07-27 13:08:45,962 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 09:09:23] 2025-07-27 13:08:45,962 | INFO     | log transfer has been attempted: DONE
[2025-07-27 09:09:23] 2025-07-27 13:08:45,962 | INFO     | job 6745966213 has finished - writing final server update
[2025-07-27 09:09:23] 2025-07-27 13:08:45,963 | INFO     | total number of processed events: 400 (read)
[2025-07-27 09:09:23] 2025-07-27 13:08:45,963 | INFO     | executing command: lscpu
[2025-07-27 09:09:23] 2025-07-27 13:08:46,013 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 09:09:23] 2025-07-27 13:08:47,425 | INFO     | monitor loop #379: job 0:6745966213 is in state 'finished'
[2025-07-27 09:09:23] 2025-07-27 13:08:47,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 09:09:23] 2025-07-27 13:08:49,687 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 09:09:23] 2025-07-27 13:08:49,689 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2650.378375
[2025-07-27 09:09:23] 2025-07-27 13:08:49,695 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745966213/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 09:09:23] 2025-07-27 13:08:49,696 | INFO     | extracted standard info from prmon json
[2025-07-27 09:09:23] 2025-07-27 13:08:49,696 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 09:09:23] 2025-07-27 13:08:49,696 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 09:09:23] 2025-07-27 13:08:49,696 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 09:09:23] 2025-07-27 13:08:49,696 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 09:09:23] 2025-07-27 13:08:49,698 | INFO     | fitting pss+swap vs Time
[2025-07-27 09:09:23] 2025-07-27 13:08:49,698 | INFO     | sum of square deviations: 136095575.0
[2025-07-27 09:09:23] 2025-07-27 13:08:49,698 | INFO     | sum of deviations: -14155630293.0
[2025-07-27 09:09:23] 2025-07-27 13:08:49,698 | INFO     | mean x: 1753619252.5
[2025-07-27 09:09:23] 2025-07-27 13:08:49,698 | INFO     | mean y: 2521506.8421052634
[2025-07-27 09:09:23] 2025-07-27 13:08:49,698 | INFO     | -- intersect: 182400706114.07135
[2025-07-27 09:09:23] 2025-07-27 13:08:49,698 | INFO     | intersect: 182400706114.07135
[2025-07-27 09:09:23] 2025-07-27 13:08:49,698 | INFO     | chi2: 0.1693048572373661
[2025-07-27 09:09:23] 2025-07-27 13:08:49,698 | INFO     | -- intersect: 182400706114.07135
[2025-07-27 09:09:23] 2025-07-27 13:08:49,698 | INFO     | current memory leak: -104.01 B/s (using 76 data points, chi2=0.17)
[2025-07-27 09:09:23] 2025-07-27 13:08:49,699 | INFO     | could have reported an average CPU frequency of 2614 MHz (6 samples)
[2025-07-27 09:09:23] 2025-07-27 13:08:49,699 | INFO     | ..............................
[2025-07-27 09:09:23] 2025-07-27 13:08:49,699 | INFO     | . Timing measurements:
[2025-07-27 09:09:23] 2025-07-27 13:08:49,699 | INFO     | . get job = 0 s
[2025-07-27 09:09:23] 2025-07-27 13:08:49,699 | INFO     | . initial setup = 2 s
[2025-07-27 09:09:23] 2025-07-27 13:08:49,699 | INFO     | . payload setup = 8 s
[2025-07-27 09:09:23] 2025-07-27 13:08:49,699 | INFO     | . stage-in = 0 s
[2025-07-27 09:09:23] 2025-07-27 13:08:49,699 | INFO     | . payload execution = 5061 s
[2025-07-27 09:09:23] 2025-07-27 13:08:49,699 | INFO     | . stage-out = 0 s
[2025-07-27 09:09:23] 2025-07-27 13:08:49,699 | INFO     | . log creation = 0 s
[2025-07-27 09:09:23] 2025-07-27 13:08:49,699 | INFO     | ..............................
[2025-07-27 09:09:23] 2025-07-27 13:08:49,773 | INFO     | 
[2025-07-27 09:09:23] 2025-07-27 13:08:49,773 | INFO     | job summary report
[2025-07-27 09:09:23] 2025-07-27 13:08:49,773 | INFO     | --------------------------------------------------
[2025-07-27 09:09:23] 2025-07-27 13:08:49,773 | INFO     | PanDA job id: 6745966213
[2025-07-27 09:09:23] 2025-07-27 13:08:49,773 | INFO     | task id: 45758930
[2025-07-27 09:09:23] 2025-07-27 13:08:49,773 | INFO     | errors: (none)
[2025-07-27 09:09:23] 2025-07-27 13:08:49,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 09:09:23] 2025-07-27 13:08:49,773 | INFO     | pilot state: finished 
[2025-07-27 09:09:23] 2025-07-27 13:08:49,773 | INFO     | transexitcode: 0
[2025-07-27 09:09:23] 2025-07-27 13:08:49,773 | INFO     | exeerrorcode: 0
[2025-07-27 09:09:23] 2025-07-27 13:08:49,773 | INFO     | exeerrordiag: 
[2025-07-27 09:09:23] 2025-07-27 13:08:49,773 | INFO     | exitcode: 0
[2025-07-27 09:09:23] 2025-07-27 13:08:49,773 | INFO     | exitmsg: OK
[2025-07-27 09:09:23] 2025-07-27 13:08:49,774 | INFO     | cpuconsumptiontime: 54508 s
[2025-07-27 09:09:23] 2025-07-27 13:08:49,774 | INFO     | nevents: 400
[2025-07-27 09:09:23] 2025-07-27 13:08:49,774 | INFO     | neventsw: 0
[2025-07-27 09:09:23] 2025-07-27 13:08:49,774 | INFO     | pid: 2146933
[2025-07-27 09:09:23] 2025-07-27 13:08:49,774 | INFO     | pgrp: 2146933
[2025-07-27 09:09:23] 2025-07-27 13:08:49,774 | INFO     | corecount: 12
[2025-07-27 09:09:23] 2025-07-27 13:08:49,774 | INFO     | event service: False
[2025-07-27 09:09:23] 2025-07-27 13:08:49,774 | INFO     | sizes: {0: 2397464, 5: 2397726, 11: 2397782, 5073: 2424024, 5075: 2433022, 5076: 2433078, 5083: 2433400}
[2025-07-27 09:09:23] 2025-07-27 13:08:49,774 | INFO     | --------------------------------------------------
[2025-07-27 09:09:23] 2025-07-27 13:08:49,774 | INFO     | 
[2025-07-27 09:09:23] 2025-07-27 13:08:49,774 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 09:09:23] 2025-07-27 13:08:49,788 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,788 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,788 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,788 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | job 6745966213 has completed (purged errors)
[2025-07-27 09:09:23] 2025-07-27 13:08:49,789 | INFO     | overall cleanup function is called
[2025-07-27 09:09:23] 2025-07-27 13:08:50,796 | INFO     | --- collectZombieJob: --- 10, [2146933]
[2025-07-27 09:09:23] 2025-07-27 13:08:50,797 | INFO     | zombie collector waiting for pid 2146933
[2025-07-27 09:09:23] 2025-07-27 13:08:50,797 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 09:09:23] 2025-07-27 13:08:50,797 | INFO     | collected zombie processes
[2025-07-27 09:09:23] 2025-07-27 13:08:50,797 | INFO     | will attempt to kill all subprocesses of pid=2146933
[2025-07-27 09:09:23] 2025-07-27 13:08:51,020 | INFO     | process IDs to be killed: [2146933] (in reverse order)
[2025-07-27 09:09:23] 2025-07-27 13:08:51,108 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 09:09:23] 2025-07-27 13:08:51,108 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 09:09:23] 2025-07-27 13:08:51,118 | INFO     | did not find any defunct processes belonging to 2146933
[2025-07-27 09:09:23] 2025-07-27 13:08:51,129 | INFO     | did not find any defunct processes belonging to 2146933
[2025-07-27 09:09:23] 2025-07-27 13:08:51,130 | INFO     | ready for new job
[2025-07-27 09:09:23] 2025-07-27 13:08:51,130 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 09:09:23] 2025-07-27 13:08:51,131 | INFO     | ***************************************
[2025-07-27 09:09:23] 2025-07-27 13:08:51,132 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 09:09:23] 2025-07-27 13:08:51,132 | INFO     | ***************************************
[2025-07-27 09:09:23] 2025-07-27 13:08:51,132 | INFO     | 
[2025-07-27 09:09:23] 2025-07-27 13:08:51,147 | INFO     | architecture information:
[2025-07-27 09:09:23] 2025-07-27 13:08:51,147 | INFO     | executing command: cat /etc/os-release
[2025-07-27 09:09:23] 2025-07-27 13:08:51,161 | INFO     | cat /etc/os-release:
[2025-07-27 09:09:23] NAME="CentOS Linux"
[2025-07-27 09:09:23] VERSION="7 (Core)"
[2025-07-27 09:09:23] ID="centos"
[2025-07-27 09:09:23] ID_LIKE="rhel fedora"
[2025-07-27 09:09:23] VERSION_ID="7"
[2025-07-27 09:09:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 09:09:23] ANSI_COLOR="0;31"
[2025-07-27 09:09:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 09:09:23] HOME_URL="https://www.centos.org/"
[2025-07-27 09:09:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 09:09:23] 
[2025-07-27 09:09:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 09:09:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 09:09:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 09:09:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 09:09:23] 
[2025-07-27 09:09:23] 2025-07-27 13:08:51,161 | INFO     | ***************************************
[2025-07-27 09:09:23] 2025-07-27 13:08:51,664 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 09:09:23] 2025-07-27 13:08:51,678 | INFO     | sufficient remaining disk space (76292292608 B)
[2025-07-27 09:09:23] 2025-07-27 13:08:51,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 09:09:23] 2025-07-27 13:08:51,679 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 09:09:23] 2025-07-27 13:08:51,679 | INFO     | update_server=False
[2025-07-27 09:09:23] 2025-07-27 13:08:51,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 09:09:23] 2025-07-27 13:08:51,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:09:23] 2025-07-27 13:08:51,680 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:09:23] 2025-07-27 13:08:51,680 | INFO     | aborting loop
[2025-07-27 09:09:23] 2025-07-27 13:08:52,472 | INFO     | all data control threads have been joined
[2025-07-27 09:09:23] 2025-07-27 13:08:52,482 | INFO     | all payload control threads have been joined
[2025-07-27 09:09:23] 2025-07-27 13:08:52,684 | INFO     | [job] queue monitor thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:52,684 | INFO     | [job] retrieve thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:52,685 | INFO     | [job] job monitor thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:52,787 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:52,798 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 09:09:23] 2025-07-27 13:08:52,945 | INFO     | [data] copytool_in thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:53,096 | INFO     | all job control threads have been joined
[2025-07-27 09:09:23] 2025-07-27 13:08:53,411 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:53,421 | INFO     | [job] validate thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:53,477 | INFO     | [data] control thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:53,487 | INFO     | [payload] control thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:53,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 09:09:23] 2025-07-27 13:08:53,581 | INFO     | [payload] failed_post thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:53,873 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:53,884 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:54,101 | INFO     | [job] control thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:54,114 | INFO     | [payload] validate_post thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:54,803 | INFO     | [data] copytool_out thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:57,557 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 09:09:23] 2025-07-27 13:08:59,517 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139972778460992)>', '<ExcThread(monitor, started 139972279514880)>']
[2025-07-27 09:09:23] 2025-07-27 13:09:04,542 | INFO     | all workflow threads have been joined
[2025-07-27 09:09:23] 2025-07-27 13:09:04,542 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 09:09:23] 2025-07-27 13:09:04,543 | INFO     | traces error code: 0
[2025-07-27 09:09:23] 2025-07-27 13:09:04,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 09:09:23] 2025-07-27 13:09:22,834 | INFO     | PID=2138902 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 09:09:23] 2025-07-27 13:09:22,835 | INFO     | .. there are 10 such processes running
[2025-07-27 09:09:23] 2025-07-27 13:09:22,835 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 09:09:23] 2025-07-27 13:09:22,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 09:09:23] 2025-07-27 13:09:22,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 09:09:23] 2025-07-27 13:09:22,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 09:09:23] 2025-07-27 13:09:22,835 | INFO     | [monitor] control thread has ended
[2025-07-27 09:09:23] 2025-07-27 13:09:22,986 [wrapper] ==== pilot stdout END ====
[2025-07-27 09:09:23] 2025-07-27 13:09:22,989 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 09:09:23] 2025-07-27 13:09:22,991 [wrapper] pilotpid: 2138902
[2025-07-27 09:09:23] 2025-07-27 13:09:22,994 [wrapper] Pilot exit status: 0
[2025-07-27 09:09:23] 2025-07-27 13:09:23,002 [wrapper] pandaids: 6745966213
[2025-07-27 09:09:23] 2025-07-27 13:09:23,060 [wrapper] cleanup supervisor_pilot 2435981 2138903
[2025-07-27 09:09:23] 2025-07-27 13:09:23,062 [wrapper] Test setup, not cleaning
[2025-07-27 09:09:23] 2025-07-27 13:09:23,065 [wrapper] apfmon messages muted
[2025-07-27 09:09:23] 2025-07-27 13:09:23,067 [wrapper] ==== wrapper stdout END ====
[2025-07-27 09:09:23] 2025-07-27 13:09:23,070 [wrapper] ==== wrapper stderr END ====
[2025-07-27 09:09:23]  *** Error codes and diagnostics ***
[2025-07-27 09:09:23]     "exeErrorCode": 0,
[2025-07-27 09:09:23]     "exeErrorDiag": "",
[2025-07-27 09:09:23]     "pilotErrorCode": 0,
[2025-07-27 09:09:23]     "pilotErrorDiag": "",
[2025-07-27 09:09:23]  *** Listing of results directory ***
[2025-07-27 09:09:23] total 407784
[2025-07-27 09:09:23] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 22:38 pilot3.tar.gz
[2025-07-27 09:09:23] -rwx------. 1 boincer umatlas     36292 Jul 26 22:56 runpilot2-wrapper.sh
[2025-07-27 09:09:23] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 22:56 queuedata.json
[2025-07-27 09:09:23] -rw-r--r--. 1 boincer umatlas       100 Jul 27 07:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 09:09:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 07:43 run_atlas
[2025-07-27 09:09:23] -rw-r--r--. 1 boincer umatlas       105 Jul 27 07:43 job.xml
[2025-07-27 09:09:23] -rw-r--r--. 2 boincer umatlas 238812607 Jul 27 07:43 EVNT.45758926._000004.pool.root.1
[2025-07-27 09:09:23] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 07:43 start_atlas.sh
[2025-07-27 09:09:23] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 07:43 shared
[2025-07-27 09:09:23] -rw-r--r--. 2 boincer umatlas    542878 Jul 27 07:43 input.tar.gz
[2025-07-27 09:09:23] -rw-r--r--. 1 boincer umatlas         0 Jul 27 07:43 boinc_lockfile
[2025-07-27 09:09:23] -rw-r--r--. 1 boincer umatlas      2555 Jul 27 07:43 pandaJob.out
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas    980109 Jul 27 07:43 agis_schedconf.cvmfs.json
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas   1593052 Jul 27 07:43 agis_ddmendpoints.agis.ALL.json
[2025-07-27 09:09:23] drwx------. 4 boincer umatlas      4096 Jul 27 07:43 pilot3
[2025-07-27 09:09:23] -rw-r--r--. 1 boincer umatlas      6843 Jul 27 09:03 init_data.xml
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas 173101467 Jul 27 09:08 HITS.45758930._000100.pool.root.1
[2025-07-27 09:09:23] -rw-r--r--. 1 boincer umatlas       530 Jul 27 09:08 boinc_task_state.xml
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas      1035 Jul 27 09:08 memory_monitor_summary.json
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas        95 Jul 27 09:08 pilot_heartbeat.json
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas    387400 Jul 27 09:08 log.45758930._000100.job.log.tgz.1
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas      7818 Jul 27 09:08 heartbeat.json
[2025-07-27 09:09:23] -rw-r--r--. 1 boincer umatlas        27 Jul 27 09:09 wrapper_checkpoint.txt
[2025-07-27 09:09:23] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 09:09 boinc_mmap_file
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas       823 Jul 27 09:09 pilotlog.txt
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas    501557 Jul 27 09:09 log.45758930._000100.job.log.1
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas       357 Jul 27 09:09 output.list
[2025-07-27 09:09:23] -rw-r--r--. 1 boincer umatlas       620 Jul 27 09:09 runtime_log
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas    911360 Jul 27 09:09 result.tar.gz
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas       654 Jul 27 09:09 ZokNDmZj6z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmto1KDmOUpUHm.diag
[2025-07-27 09:09:23] -rw-r--r--. 1 boincer umatlas      8667 Jul 27 09:09 runtime_log.err
[2025-07-27 09:09:23] -rw-r--r--. 1 boincer umatlas     21598 Jul 27 09:09 stderr.txt
[2025-07-27 09:09:23] HITS file was successfully produced:
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas 173101467 Jul 27 09:08 shared/HITS.pool.root.1
[2025-07-27 09:09:23]  *** Contents of shared directory: ***
[2025-07-27 09:09:23] total 403708
[2025-07-27 09:09:23] -rw-r--r--. 2 boincer umatlas 238812607 Jul 27 07:43 ATLAS.root_0
[2025-07-27 09:09:23] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 07:43 start_atlas.sh
[2025-07-27 09:09:23] -rw-r--r--. 2 boincer umatlas    542878 Jul 27 07:43 input.tar.gz
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas 173101467 Jul 27 09:08 HITS.pool.root.1
[2025-07-27 09:09:23] -rw-------. 1 boincer umatlas    911360 Jul 27 09:09 result.tar.gz
09:09:24 (2134367): run_atlas exited; CPU time 54596.720487
09:09:24 (2134367): called boinc_finish(0)

</stderr_txt>
]]>

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