Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:19:17 (11333): wrapper (7.7.26015): starting
06:19:17 (11333): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 06:19:17] Arguments: --nthreads 8
[2025-07-27 06:19:17] Threads: 8
[2025-07-27 06:19:17] Checking for CVMFS
[2025-07-27 06:19:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 06:19:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 06:19:17] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 06:19:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 06:19:17] 2.11.2.0 2991 111873 83276 148809 2 56 16055870 20275200 1 130560 0 28117396 99.962 9251952 10675 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 06:19:17] CVMFS is ok
[2025-07-27 06:19:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 06:19:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 06:19:17] Further information can be found at the LHC@home message board.
[2025-07-27 06:19:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 06:19:17] Checking for apptainer binary...
[2025-07-27 06:19:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 06:19:17] Running /usr/bin/apptainer --version
[2025-07-27 06:19:17] apptainer version 1.3.2-1.el7
[2025-07-27 06:19:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 06:19:19] c-115-15.aglt2.org
[2025-07-27 06:19:19] apptainer works
[2025-07-27 06:19:19] Set ATHENA_PROC_NUMBER=8
[2025-07-27 06:19:19] Set ATHENA_CORE_NUMBER=8
[2025-07-27 06:19:19] Starting ATLAS job with PandaID=6746446344
[2025-07-27 06:19:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 09:03:14]  *** The last 200 lines of the pilot log: ***
[2025-07-27 09:03:14] 2025-07-27 13:02:37,205 | INFO     | monitor loop #722: job 0:6746446344 is in state 'finished'
[2025-07-27 09:03:14] 2025-07-27 13:02:37,210 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 09:03:14] 2025-07-27 13:02:39,713 | INFO     | monitor loop #723: job 0:6746446344 is in state 'finished'
[2025-07-27 09:03:14] 2025-07-27 13:02:39,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 09:03:14] 2025-07-27 13:02:41,879 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 09:03:14] 2025-07-27 13:02:41,882 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1945.375
[2025-07-27 09:03:14] 2025-07-27 13:02:41,884 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746446344/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 09:03:14] 2025-07-27 13:02:41,885 | INFO     | extracted standard info from prmon json
[2025-07-27 09:03:14] 2025-07-27 13:02:41,886 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 09:03:14] 2025-07-27 13:02:41,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 09:03:14] 2025-07-27 13:02:41,886 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 09:03:14] 2025-07-27 13:02:41,886 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 09:03:14] 2025-07-27 13:02:41,890 | INFO     | fitting pss+swap vs Time
[2025-07-27 09:03:14] 2025-07-27 13:02:41,890 | INFO     | sum of square deviations: 1270051720.0
[2025-07-27 09:03:14] 2025-07-27 13:02:41,891 | INFO     | sum of deviations: -11887392659.5
[2025-07-27 09:03:14] 2025-07-27 13:02:41,891 | INFO     | mean x: 1753616456.5
[2025-07-27 09:03:14] 2025-07-27 13:02:41,891 | INFO     | mean y: 2546238.66875
[2025-07-27 09:03:14] 2025-07-27 13:02:41,891 | INFO     | -- intersect: 16415993867.853886
[2025-07-27 09:03:14] 2025-07-27 13:02:41,892 | INFO     | intersect: 16415993867.853886
[2025-07-27 09:03:14] 2025-07-27 13:02:41,892 | INFO     | chi2: 1.568118897094405
[2025-07-27 09:03:14] 2025-07-27 13:02:41,892 | INFO     | sum of square deviations: 1154663510.0
[2025-07-27 09:03:14] 2025-07-27 13:02:41,893 | INFO     | sum of deviations: -11143415217.999994
[2025-07-27 09:03:14] 2025-07-27 13:02:41,893 | INFO     | mean x: 1753616304.0
[2025-07-27 09:03:14] 2025-07-27 13:02:41,893 | INFO     | mean y: 2547222.212903226
[2025-07-27 09:03:14] 2025-07-27 13:02:41,893 | INFO     | -- intersect: 16926330159.223274
[2025-07-27 09:03:14] 2025-07-27 13:02:41,893 | INFO     | intersect: 16926330159.223274
[2025-07-27 09:03:14] 2025-07-27 13:02:41,894 | INFO     | chi2: 1.566930630585209
[2025-07-27 09:03:14] 2025-07-27 13:02:41,894 | INFO     | current chi2=1.566930630585209 (change=0.07577655695609382 %)
[2025-07-27 09:03:14] 2025-07-27 13:02:41,894 | INFO     | right removable region: 154
[2025-07-27 09:03:14] 2025-07-27 13:02:41,894 | INFO     | sum of square deviations: 1154663510.0
[2025-07-27 09:03:14] 2025-07-27 13:02:41,895 | INFO     | sum of deviations: -35011301421.00001
[2025-07-27 09:03:14] 2025-07-27 13:02:41,895 | INFO     | mean x: 1753616609.0
[2025-07-27 09:03:14] 2025-07-27 13:02:41,895 | INFO     | mean y: 2576347.9741935483
[2025-07-27 09:03:14] 2025-07-27 13:02:41,895 | INFO     | -- intersect: 53175123278.61281
[2025-07-27 09:03:14] 2025-07-27 13:02:41,895 | INFO     | intersect: 53175123278.61281
[2025-07-27 09:03:14] 2025-07-27 13:02:41,896 | INFO     | chi2: 0.16706290531053752
[2025-07-27 09:03:14] 2025-07-27 13:02:41,896 | INFO     | current chi2=0.16706290531053752 (change=89.34628581926465 %)
[2025-07-27 09:03:14] 2025-07-27 13:02:41,896 | INFO     | sum of square deviations: 1046484737.5
[2025-07-27 09:03:14] 2025-07-27 13:02:41,897 | INFO     | sum of deviations: -33046285820.499992
[2025-07-27 09:03:14] 2025-07-27 13:02:41,897 | INFO     | mean x: 1753616761.5
[2025-07-27 09:03:14] 2025-07-27 13:02:41,897 | INFO     | mean y: 2573518.8333333335
[2025-07-27 09:03:14] 2025-07-27 13:02:41,897 | INFO     | -- intersect: 55378938451.3879
[2025-07-27 09:03:14] 2025-07-27 13:02:41,897 | INFO     | intersect: 55378938451.3879
[2025-07-27 09:03:14] 2025-07-27 13:02:41,898 | INFO     | chi2: 0.1545152223636636
[2025-07-27 09:03:14] 2025-07-27 13:02:41,898 | INFO     | current chi2=0.1545152223636636 (change=7.510753463523341 %)
[2025-07-27 09:03:14] 2025-07-27 13:02:41,898 | INFO     | left removable region: 20
[2025-07-27 09:03:14] 2025-07-27 13:02:41,898 | INFO     | sum of square deviations: 746051197.5
[2025-07-27 09:03:14] 2025-07-27 13:02:41,899 | INFO     | sum of deviations: -23379633998.499996
[2025-07-27 09:03:14] 2025-07-27 13:02:41,899 | INFO     | mean x: 1753616883.5
[2025-07-27 09:03:14] 2025-07-27 13:02:41,899 | INFO     | mean y: 2562164.0223880596
[2025-07-27 09:03:14] 2025-07-27 13:02:41,899 | INFO     | -- intersect: 54957129688.61939
[2025-07-27 09:03:14] 2025-07-27 13:02:41,899 | INFO     | intersect: 54957129688.61939
[2025-07-27 09:03:14] 2025-07-27 13:02:41,900 | INFO     | chi2: 0.1435395433620278
[2025-07-27 09:03:14] 2025-07-27 13:02:41,900 | INFO     | -- intersect: 54957129688.61939
[2025-07-27 09:03:14] 2025-07-27 13:02:41,900 | INFO     | current memory leak: -31.34 B/s (using 134 data points, chi2=0.14)
[2025-07-27 09:03:14] 2025-07-27 13:02:41,900 | INFO     | could have reported an average CPU frequency of 2211 MHz (9 samples)
[2025-07-27 09:03:14] 2025-07-27 13:02:41,901 | INFO     | ..............................
[2025-07-27 09:03:14] 2025-07-27 13:02:41,901 | INFO     | . Timing measurements:
[2025-07-27 09:03:14] 2025-07-27 13:02:41,901 | INFO     | . get job = 0 s
[2025-07-27 09:03:14] 2025-07-27 13:02:41,901 | INFO     | . initial setup = 2 s
[2025-07-27 09:03:14] 2025-07-27 13:02:41,901 | INFO     | . payload setup = 10 s
[2025-07-27 09:03:14] 2025-07-27 13:02:41,901 | INFO     | . stage-in = 0 s
[2025-07-27 09:03:14] 2025-07-27 13:02:41,901 | INFO     | . payload execution = 9745 s
[2025-07-27 09:03:14] 2025-07-27 13:02:41,901 | INFO     | . stage-out = 0 s
[2025-07-27 09:03:14] 2025-07-27 13:02:41,901 | INFO     | . log creation = 0 s
[2025-07-27 09:03:14] 2025-07-27 13:02:41,902 | INFO     | ..............................
[2025-07-27 09:03:14] 2025-07-27 13:02:41,996 | INFO     | 
[2025-07-27 09:03:14] 2025-07-27 13:02:41,996 | INFO     | job summary report
[2025-07-27 09:03:14] 2025-07-27 13:02:41,996 | INFO     | --------------------------------------------------
[2025-07-27 09:03:14] 2025-07-27 13:02:41,996 | INFO     | PanDA job id: 6746446344
[2025-07-27 09:03:14] 2025-07-27 13:02:41,996 | INFO     | task id: 45759100
[2025-07-27 09:03:14] 2025-07-27 13:02:41,997 | INFO     | errors: (none)
[2025-07-27 09:03:14] 2025-07-27 13:02:41,997 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 09:03:14] 2025-07-27 13:02:41,997 | INFO     | pilot state: finished 
[2025-07-27 09:03:14] 2025-07-27 13:02:41,997 | INFO     | transexitcode: 0
[2025-07-27 09:03:14] 2025-07-27 13:02:41,997 | INFO     | exeerrorcode: 0
[2025-07-27 09:03:14] 2025-07-27 13:02:41,997 | INFO     | exeerrordiag: 
[2025-07-27 09:03:14] 2025-07-27 13:02:41,998 | INFO     | exitcode: 0
[2025-07-27 09:03:14] 2025-07-27 13:02:41,998 | INFO     | exitmsg: OK
[2025-07-27 09:03:14] 2025-07-27 13:02:41,998 | INFO     | cpuconsumptiontime: 74255 s
[2025-07-27 09:03:14] 2025-07-27 13:02:41,998 | INFO     | nevents: 400
[2025-07-27 09:03:14] 2025-07-27 13:02:41,998 | INFO     | neventsw: 0
[2025-07-27 09:03:14] 2025-07-27 13:02:41,998 | INFO     | pid: 21529
[2025-07-27 09:03:14] 2025-07-27 13:02:41,998 | INFO     | pgrp: 21529
[2025-07-27 09:03:14] 2025-07-27 13:02:41,999 | INFO     | corecount: 8
[2025-07-27 09:03:14] 2025-07-27 13:02:41,999 | INFO     | event service: False
[2025-07-27 09:03:14] 2025-07-27 13:02:41,999 | INFO     | sizes: {0: 2397239, 1: 2397494, 7: 2397756, 12: 2397784, 9760: 2426214, 9762: 2435212, 9765: 2435396, 9771: 2435654}
[2025-07-27 09:03:14] 2025-07-27 13:02:41,999 | INFO     | --------------------------------------------------
[2025-07-27 09:03:14] 2025-07-27 13:02:41,999 | INFO     | 
[2025-07-27 09:03:14] 2025-07-27 13:02:41,999 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 09:03:14] 2025-07-27 13:02:42,025 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,025 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,026 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,026 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,028 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 09:03:14] 2025-07-27 13:02:42,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 09:03:14] 2025-07-27 13:02:42,029 | INFO     | job 6746446344 has completed (purged errors)
[2025-07-27 09:03:14] 2025-07-27 13:02:42,029 | INFO     | overall cleanup function is called
[2025-07-27 09:03:14] 2025-07-27 13:02:43,038 | INFO     | --- collectZombieJob: --- 10, [21529]
[2025-07-27 09:03:14] 2025-07-27 13:02:43,038 | INFO     | zombie collector waiting for pid 21529
[2025-07-27 09:03:14] 2025-07-27 13:02:43,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 09:03:14] 2025-07-27 13:02:43,038 | INFO     | collected zombie processes
[2025-07-27 09:03:14] 2025-07-27 13:02:43,038 | INFO     | will attempt to kill all subprocesses of pid=21529
[2025-07-27 09:03:14] 2025-07-27 13:02:43,126 | INFO     | process IDs to be killed: [21529] (in reverse order)
[2025-07-27 09:03:14] 2025-07-27 13:02:43,186 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 09:03:14] 2025-07-27 13:02:43,187 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 09:03:14] 2025-07-27 13:02:43,191 | INFO     | did not find any defunct processes belonging to 21529
[2025-07-27 09:03:14] 2025-07-27 13:02:43,193 | INFO     | did not find any defunct processes belonging to 21529
[2025-07-27 09:03:14] 2025-07-27 13:02:43,193 | INFO     | ready for new job
[2025-07-27 09:03:14] 2025-07-27 13:02:43,194 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 09:03:14] 2025-07-27 13:02:43,195 | INFO     | ***************************************
[2025-07-27 09:03:14] 2025-07-27 13:02:43,195 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 09:03:14] 2025-07-27 13:02:43,195 | INFO     | ***************************************
[2025-07-27 09:03:14] 2025-07-27 13:02:43,195 | INFO     | 
[2025-07-27 09:03:14] 2025-07-27 13:02:43,196 | INFO     | architecture information:
[2025-07-27 09:03:14] 2025-07-27 13:02:43,196 | INFO     | executing command: cat /etc/os-release
[2025-07-27 09:03:14] 2025-07-27 13:02:43,213 | INFO     | cat /etc/os-release:
[2025-07-27 09:03:14] NAME="CentOS Linux"
[2025-07-27 09:03:14] VERSION="7 (Core)"
[2025-07-27 09:03:14] ID="centos"
[2025-07-27 09:03:14] ID_LIKE="rhel fedora"
[2025-07-27 09:03:14] VERSION_ID="7"
[2025-07-27 09:03:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 09:03:14] ANSI_COLOR="0;31"
[2025-07-27 09:03:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 09:03:14] HOME_URL="https://www.centos.org/"
[2025-07-27 09:03:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 09:03:14] 
[2025-07-27 09:03:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 09:03:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 09:03:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 09:03:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 09:03:14] 
[2025-07-27 09:03:14] 2025-07-27 13:02:43,214 | INFO     | ***************************************
[2025-07-27 09:03:14] 2025-07-27 13:02:43,717 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 09:03:14] 2025-07-27 13:02:43,737 | INFO     | sufficient remaining disk space (18602786816 B)
[2025-07-27 09:03:14] 2025-07-27 13:02:43,738 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 09:03:14] 2025-07-27 13:02:43,738 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 09:03:14] 2025-07-27 13:02:43,738 | INFO     | update_server=False
[2025-07-27 09:03:14] 2025-07-27 13:02:43,738 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 09:03:14] 2025-07-27 13:02:43,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:03:14] 2025-07-27 13:02:43,739 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 09:03:14] 2025-07-27 13:02:43,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:03:14] 2025-07-27 13:02:43,740 | INFO     | aborting loop
[2025-07-27 09:03:14] 2025-07-27 13:02:43,889 | INFO     | all payload control threads have been joined
[2025-07-27 09:03:14] 2025-07-27 13:02:44,506 | INFO     | all data control threads have been joined
[2025-07-27 09:03:14] 2025-07-27 13:02:44,744 | INFO     | [job] retrieve thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:44,745 | INFO     | [job] queue monitor thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:44,745 | INFO     | [job] job monitor thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:44,817 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:44,844 | INFO     | all job control threads have been joined
[2025-07-27 09:03:14] 2025-07-27 13:02:44,895 | INFO     | [payload] control thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:45,293 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:45,500 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:45,511 | INFO     | [data] control thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:45,744 | INFO     | [data] copytool_out thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:45,850 | INFO     | [job] control thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:45,895 | INFO     | [job] validate thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:45,928 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:45,932 | INFO     | [data] copytool_in thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:45,951 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 09:03:14] 2025-07-27 13:02:46,012 | INFO     | [payload] failed_post thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:46,290 | INFO     | [payload] validate_post thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:49,958 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 09:03:14] 2025-07-27 13:02:51,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140267464025920)>', '<ExcThread(monitor, started 140266467989248)>']
[2025-07-27 09:03:14] 2025-07-27 13:02:56,790 | INFO     | all workflow threads have been joined
[2025-07-27 09:03:14] 2025-07-27 13:02:56,791 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 09:03:14] 2025-07-27 13:02:56,791 | INFO     | traces error code: 0
[2025-07-27 09:03:14] 2025-07-27 13:02:56,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 09:03:14] 2025-07-27 13:03:13,983 | INFO     | PID=14942 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 09:03:14] 2025-07-27 13:03:13,985 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 09:03:14] 2025-07-27 13:03:13,985 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 09:03:14] 2025-07-27 13:03:13,985 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 09:03:14] 2025-07-27 13:03:13,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 09:03:14] 2025-07-27 13:03:13,985 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 09:03:14] 2025-07-27 13:03:13,985 | INFO     | [monitor] control thread has ended
[2025-07-27 09:03:14] 2025-07-27 13:03:14,081 [wrapper] ==== pilot stdout END ====
[2025-07-27 09:03:14] 2025-07-27 13:03:14,085 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 09:03:14] 2025-07-27 13:03:14,090 [wrapper] pilotpid: 14942
[2025-07-27 09:03:14] 2025-07-27 13:03:14,094 [wrapper] Pilot exit status: 0
[2025-07-27 09:03:14] 2025-07-27 13:03:14,113 [wrapper] pandaids: 6746446344
[2025-07-27 09:03:14] 2025-07-27 13:03:14,158 [wrapper] cleanup supervisor_pilot 13954 14943
[2025-07-27 09:03:14] 2025-07-27 13:03:14,163 [wrapper] Test setup, not cleaning
[2025-07-27 09:03:14] 2025-07-27 13:03:14,168 [wrapper] apfmon messages muted
[2025-07-27 09:03:14] 2025-07-27 13:03:14,172 [wrapper] ==== wrapper stdout END ====
[2025-07-27 09:03:14] 2025-07-27 13:03:14,177 [wrapper] ==== wrapper stderr END ====
[2025-07-27 09:03:14]  *** Error codes and diagnostics ***
[2025-07-27 09:03:14]     "exeErrorCode": 0,
[2025-07-27 09:03:14]     "exeErrorDiag": "",
[2025-07-27 09:03:14]     "pilotErrorCode": 0,
[2025-07-27 09:03:14]     "pilotErrorDiag": "",
[2025-07-27 09:03:14]  *** Listing of results directory ***
[2025-07-27 09:03:14] total 401012
[2025-07-27 09:03:14] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 03:44 pilot3.tar.gz
[2025-07-27 09:03:14] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 03:49 queuedata.json
[2025-07-27 09:03:14] -rwx------ 1 boincer umatlas     36292 Jul 27 03:50 runpilot2-wrapper.sh
[2025-07-27 09:03:14] -rw-r--r-- 1 boincer umatlas       100 Jul 27 06:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 09:03:14] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 06:19 run_atlas
[2025-07-27 09:03:14] -rw-r--r-- 1 boincer umatlas       105 Jul 27 06:19 job.xml
[2025-07-27 09:03:14] -rw-r--r-- 2 boincer umatlas 232508862 Jul 27 06:19 EVNT.45759097._000004.pool.root.1
[2025-07-27 09:03:14] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 06:19 start_atlas.sh
[2025-07-27 09:03:14] drwxrwx--x 2 boincer umatlas      4096 Jul 27 06:19 shared
[2025-07-27 09:03:14] -rw-r--r-- 2 boincer umatlas    542880 Jul 27 06:19 input.tar.gz
[2025-07-27 09:03:14] -rw-r--r-- 1 boincer umatlas         0 Jul 27 06:19 boinc_lockfile
[2025-07-27 09:03:14] -rw-r--r-- 1 boincer umatlas      2559 Jul 27 06:19 pandaJob.out
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas    980117 Jul 27 06:19 agis_schedconf.cvmfs.json
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas   1593052 Jul 27 06:19 agis_ddmendpoints.agis.ALL.json
[2025-07-27 09:03:14] drwx------ 4 boincer umatlas      4096 Jul 27 06:19 pilot3
[2025-07-27 09:03:14] -rw-r--r-- 1 boincer umatlas      5825 Jul 27 08:58 init_data.xml
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas 171775322 Jul 27 09:02 HITS.45759100._000090.pool.root.1
[2025-07-27 09:03:14] -rw-r--r-- 1 boincer umatlas       529 Jul 27 09:02 boinc_task_state.xml
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas      1049 Jul 27 09:02 memory_monitor_summary.json
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas    354455 Jul 27 09:02 log.45759100._000090.job.log.tgz.1
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas      7840 Jul 27 09:02 heartbeat.json
[2025-07-27 09:03:14] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 09:02 boinc_mmap_file
[2025-07-27 09:03:14] -rw-r--r-- 1 boincer umatlas        27 Jul 27 09:02 wrapper_checkpoint.txt
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas        95 Jul 27 09:03 pilot_heartbeat.json
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas       815 Jul 27 09:03 pilotlog.txt
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas    883263 Jul 27 09:03 log.45759100._000090.job.log.1
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas       357 Jul 27 09:03 output.list
[2025-07-27 09:03:14] -rw-r--r-- 1 boincer umatlas       620 Jul 27 09:03 runtime_log
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas   1259520 Jul 27 09:03 result.tar.gz
[2025-07-27 09:03:14] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 09:03 runtime_log.err
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas       660 Jul 27 09:03 MAcLDm9JB07n9Rq4apOajLDm4fhM0noT9bVof3QYDmdD2KDmmC1BXo.diag
[2025-07-27 09:03:14] -rw-r--r-- 1 boincer umatlas     21123 Jul 27 09:03 stderr.txt
[2025-07-27 09:03:14] HITS file was successfully produced:
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas 171775322 Jul 27 09:02 shared/HITS.pool.root.1
[2025-07-27 09:03:14]  *** Contents of shared directory: ***
[2025-07-27 09:03:14] total 396596
[2025-07-27 09:03:14] -rw-r--r-- 2 boincer umatlas 232508862 Jul 27 06:19 ATLAS.root_0
[2025-07-27 09:03:14] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 06:19 start_atlas.sh
[2025-07-27 09:03:14] -rw-r--r-- 2 boincer umatlas    542880 Jul 27 06:19 input.tar.gz
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas 171775322 Jul 27 09:02 HITS.pool.root.1
[2025-07-27 09:03:14] -rw------- 1 boincer umatlas   1259520 Jul 27 09:03 result.tar.gz
09:03:15 (11333): run_atlas exited; CPU time 74175.620951
09:03:15 (11333): called boinc_finish(0)

</stderr_txt>
]]>

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