Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:17:14 (2988791): wrapper (7.7.26015): starting
06:17:14 (2988791): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 06:17:14] Arguments: --nthreads 10
[2025-07-27 06:17:14] Threads: 10
[2025-07-27 06:17:14] Checking for CVMFS
[2025-07-27 06:17:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 06:17:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 06:17:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 06:17:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 06:17:16] 2.12.6.0 1588522 18249 425612 148809 1 64 16930757 32935936 16543 16776704 1 100780986 99.629 108329672 19937 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 06:17:16] CVMFS is ok
[2025-07-27 06:17:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 06:17:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 06:17:16] Further information can be found at the LHC@home message board.
[2025-07-27 06:17:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 06:17:16] Checking for apptainer binary...
[2025-07-27 06:17:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 06:17:16] Running /usr/bin/apptainer --version
[2025-07-27 06:17:16] apptainer version 1.4.1-1.el9
[2025-07-27 06:17:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 06:17:16] c-3-40.aglt2.org
[2025-07-27 06:17:16] apptainer works
[2025-07-27 06:17:16] Set ATHENA_PROC_NUMBER=10
[2025-07-27 06:17:16] Set ATHENA_CORE_NUMBER=10
[2025-07-27 06:17:16] Starting ATLAS job with PandaID=6746446289
[2025-07-27 06:17:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 09:44:07]  *** The last 200 lines of the pilot log: ***
[2025-07-27 09:44:07] 2025-07-27 13:43:28,011 | INFO     | monitor loop #823: job 0:6746446289 is in state 'finished'
[2025-07-27 09:44:07] 2025-07-27 13:43:28,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 09:44:07] 2025-07-27 13:43:30,517 | INFO     | monitor loop #824: job 0:6746446289 is in state 'finished'
[2025-07-27 09:44:07] 2025-07-27 13:43:30,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 09:44:07] 2025-07-27 13:43:32,978 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 09:44:07] 2025-07-27 13:43:32,997 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2495.9799625000005
[2025-07-27 09:44:07] 2025-07-27 13:43:33,022 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746446289/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 09:44:07] 2025-07-27 13:43:33,023 | INFO     | extracted standard info from prmon json
[2025-07-27 09:44:07] 2025-07-27 13:43:33,024 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 09:44:07] 2025-07-27 13:43:33,024 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 09:44:07] 2025-07-27 13:43:33,024 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 09:44:07] 2025-07-27 13:43:33,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 09:44:07] 2025-07-27 13:43:33,030 | INFO     | fitting pss+swap vs Time
[2025-07-27 09:44:07] 2025-07-27 13:43:33,030 | INFO     | sum of square deviations: 2517981304.9552116
[2025-07-27 09:44:07] 2025-07-27 13:43:33,032 | INFO     | sum of deviations: -30356120325.26866
[2025-07-27 09:44:07] 2025-07-27 13:43:33,032 | INFO     | mean x: 1753617631.0149255
[2025-07-27 09:44:07] 2025-07-27 13:43:33,033 | INFO     | mean y: 2272872.7562189056
[2025-07-27 09:44:07] 2025-07-27 13:43:33,033 | INFO     | -- intersect: 21143425790.31076
[2025-07-27 09:44:07] 2025-07-27 13:43:33,033 | INFO     | intersect: 21143425790.31076
[2025-07-27 09:44:07] 2025-07-27 13:43:33,033 | INFO     | chi2: 2.2840441024484295
[2025-07-27 09:44:07] 2025-07-27 13:43:33,034 | INFO     | sum of square deviations: 2334704364.9540925
[2025-07-27 09:44:07] 2025-07-27 13:43:33,035 | INFO     | sum of deviations: -28699022963.387733
[2025-07-27 09:44:07] 2025-07-27 13:43:33,036 | INFO     | mean x: 1753617478.5153062
[2025-07-27 09:44:07] 2025-07-27 13:43:33,036 | INFO     | mean y: 2274244.7959183673
[2025-07-27 09:44:07] 2025-07-27 13:43:33,036 | INFO     | -- intersect: 21558368900.873905
[2025-07-27 09:44:07] 2025-07-27 13:43:33,036 | INFO     | intersect: 21558368900.873905
[2025-07-27 09:44:07] 2025-07-27 13:43:33,036 | INFO     | chi2: 2.2812759104432616
[2025-07-27 09:44:07] 2025-07-27 13:43:33,036 | INFO     | current chi2=2.2812759104432616 (change=0.12119695947203676 %)
[2025-07-27 09:44:07] 2025-07-27 13:43:33,036 | INFO     | right removable region: 195
[2025-07-27 09:44:07] 2025-07-27 13:43:33,037 | INFO     | sum of square deviations: 2334702534.9540925
[2025-07-27 09:44:07] 2025-07-27 13:43:33,038 | INFO     | sum of deviations: -63062551227.12759
[2025-07-27 09:44:07] 2025-07-27 13:43:33,038 | INFO     | mean x: 1753617783.5153062
[2025-07-27 09:44:07] 2025-07-27 13:43:33,038 | INFO     | mean y: 2299873.2091836734
[2025-07-27 09:44:07] 2025-07-27 13:43:33,038 | INFO     | -- intersect: 47369195505.55167
[2025-07-27 09:44:07] 2025-07-27 13:43:33,039 | INFO     | intersect: 47369195505.55167
[2025-07-27 09:44:07] 2025-07-27 13:43:33,039 | INFO     | chi2: 0.561657564922172
[2025-07-27 09:44:07] 2025-07-27 13:43:33,039 | INFO     | current chi2=0.561657564922172 (change=75.40951313855581 %)
[2025-07-27 09:44:07] 2025-07-27 13:43:33,039 | INFO     | sum of square deviations: 2160540214.952886
[2025-07-27 09:44:07] 2025-07-27 13:43:33,040 | INFO     | sum of deviations: -62647292932.46075
[2025-07-27 09:44:07] 2025-07-27 13:43:33,041 | INFO     | mean x: 1753617936.0157068
[2025-07-27 09:44:07] 2025-07-27 13:43:33,041 | INFO     | mean y: 2299435.4869109946
[2025-07-27 09:44:07] 2025-07-27 13:43:33,041 | INFO     | -- intersect: 50850423330.08835
[2025-07-27 09:44:07] 2025-07-27 13:43:33,041 | INFO     | intersect: 50850423330.08835
[2025-07-27 09:44:07] 2025-07-27 13:43:33,041 | INFO     | chi2: 0.5051734228447912
[2025-07-27 09:44:07] 2025-07-27 13:43:33,041 | INFO     | current chi2=0.5051734228447912 (change=10.056686779462813 %)
[2025-07-27 09:44:07] 2025-07-27 13:43:33,041 | INFO     | left removable region: 20
[2025-07-27 09:44:07] 2025-07-27 13:43:33,042 | INFO     | sum of square deviations: 1661776642.9485712
[2025-07-27 09:44:07] 2025-07-27 13:43:33,042 | INFO     | sum of deviations: -44611704617.15431
[2025-07-27 09:44:07] 2025-07-27 13:43:33,043 | INFO     | mean x: 1753618058.0171428
[2025-07-27 09:44:07] 2025-07-27 13:43:33,043 | INFO     | mean y: 2286011.0514285713
[2025-07-27 09:44:07] 2025-07-27 13:43:33,043 | INFO     | -- intersect: 47079545850.71188
[2025-07-27 09:44:07] 2025-07-27 13:43:33,043 | INFO     | intersect: 47079545850.71188
[2025-07-27 09:44:07] 2025-07-27 13:43:33,043 | INFO     | chi2: 0.46654462926314044
[2025-07-27 09:44:07] 2025-07-27 13:43:33,043 | INFO     | -- intersect: 47079545850.71188
[2025-07-27 09:44:07] 2025-07-27 13:43:33,043 | INFO     | current memory leak: -26.85 B/s (using 175 data points, chi2=0.47)
[2025-07-27 09:44:07] 2025-07-27 13:43:33,044 | INFO     | could have reported an average CPU frequency of 2490 MHz (10 samples)
[2025-07-27 09:44:07] 2025-07-27 13:43:33,044 | INFO     | ..............................
[2025-07-27 09:44:07] 2025-07-27 13:43:33,044 | INFO     | . Timing measurements:
[2025-07-27 09:44:07] 2025-07-27 13:43:33,044 | INFO     | . get job = 0 s
[2025-07-27 09:44:07] 2025-07-27 13:43:33,044 | INFO     | . initial setup = 3 s
[2025-07-27 09:44:07] 2025-07-27 13:43:33,044 | INFO     | . payload setup = 19 s
[2025-07-27 09:44:07] 2025-07-27 13:43:33,044 | INFO     | . stage-in = 0 s
[2025-07-27 09:44:07] 2025-07-27 13:43:33,044 | INFO     | . payload execution = 12271 s
[2025-07-27 09:44:07] 2025-07-27 13:43:33,045 | INFO     | . stage-out = 3 s
[2025-07-27 09:44:07] 2025-07-27 13:43:33,045 | INFO     | . log creation = 0 s
[2025-07-27 09:44:07] 2025-07-27 13:43:33,045 | INFO     | ..............................
[2025-07-27 09:44:07] 2025-07-27 13:43:33,354 | INFO     | 
[2025-07-27 09:44:07] 2025-07-27 13:43:33,355 | INFO     | job summary report
[2025-07-27 09:44:07] 2025-07-27 13:43:33,355 | INFO     | --------------------------------------------------
[2025-07-27 09:44:07] 2025-07-27 13:43:33,355 | INFO     | PanDA job id: 6746446289
[2025-07-27 09:44:07] 2025-07-27 13:43:33,355 | INFO     | task id: 45759100
[2025-07-27 09:44:07] 2025-07-27 13:43:33,355 | INFO     | errors: (none)
[2025-07-27 09:44:07] 2025-07-27 13:43:33,355 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 09:44:07] 2025-07-27 13:43:33,355 | INFO     | pilot state: finished 
[2025-07-27 09:44:07] 2025-07-27 13:43:33,356 | INFO     | transexitcode: 0
[2025-07-27 09:44:07] 2025-07-27 13:43:33,356 | INFO     | exeerrorcode: 0
[2025-07-27 09:44:07] 2025-07-27 13:43:33,356 | INFO     | exeerrordiag: 
[2025-07-27 09:44:07] 2025-07-27 13:43:33,356 | INFO     | exitcode: 0
[2025-07-27 09:44:07] 2025-07-27 13:43:33,356 | INFO     | exitmsg: OK
[2025-07-27 09:44:07] 2025-07-27 13:43:33,356 | INFO     | cpuconsumptiontime: 66657 s
[2025-07-27 09:44:07] 2025-07-27 13:43:33,356 | INFO     | nevents: 400
[2025-07-27 09:44:07] 2025-07-27 13:43:33,356 | INFO     | neventsw: 0
[2025-07-27 09:44:07] 2025-07-27 13:43:33,356 | INFO     | pid: 3004004
[2025-07-27 09:44:07] 2025-07-27 13:43:33,356 | INFO     | pgrp: 3004004
[2025-07-27 09:44:07] 2025-07-27 13:43:33,356 | INFO     | corecount: 10
[2025-07-27 09:44:07] 2025-07-27 13:43:33,357 | INFO     | event service: False
[2025-07-27 09:44:07] 2025-07-27 13:43:33,357 | INFO     | sizes: {0: 2397240, 1: 2397324, 2: 2397523, 13: 2397523, 14: 2397841, 23: 2397869, 12295: 2428030, 12296: 2428029, 12299: 2437139, 12313: 2437277}
[2025-07-27 09:44:07] 2025-07-27 13:43:33,358 | INFO     | --------------------------------------------------
[2025-07-27 09:44:07] 2025-07-27 13:43:33,358 | INFO     | 
[2025-07-27 09:44:07] 2025-07-27 13:43:33,359 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 09:44:07] 2025-07-27 13:43:33,434 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,434 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,434 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,434 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,434 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,435 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,435 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,435 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,435 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,435 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,435 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,435 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,435 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,435 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,436 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,436 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,436 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 09:44:07] 2025-07-27 13:43:33,436 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,436 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 09:44:07] 2025-07-27 13:43:33,436 | INFO     | job 6746446289 has completed (purged errors)
[2025-07-27 09:44:07] 2025-07-27 13:43:33,436 | INFO     | overall cleanup function is called
[2025-07-27 09:44:07] 2025-07-27 13:43:34,446 | INFO     | --- collectZombieJob: --- 10, [3004004]
[2025-07-27 09:44:07] 2025-07-27 13:43:34,448 | INFO     | zombie collector waiting for pid 3004004
[2025-07-27 09:44:07] 2025-07-27 13:43:34,448 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 09:44:07] 2025-07-27 13:43:34,448 | INFO     | collected zombie processes
[2025-07-27 09:44:07] 2025-07-27 13:43:34,448 | INFO     | will attempt to kill all subprocesses of pid=3004004
[2025-07-27 09:44:07] 2025-07-27 13:43:34,880 | INFO     | process IDs to be killed: [3004004] (in reverse order)
[2025-07-27 09:44:07] 2025-07-27 13:43:35,117 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 09:44:07] 2025-07-27 13:43:35,117 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 09:44:07] 2025-07-27 13:43:35,144 | INFO     | did not find any defunct processes belonging to 3004004
[2025-07-27 09:44:07] 2025-07-27 13:43:35,171 | INFO     | did not find any defunct processes belonging to 3004004
[2025-07-27 09:44:07] 2025-07-27 13:43:35,171 | INFO     | ready for new job
[2025-07-27 09:44:07] 2025-07-27 13:43:35,172 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 09:44:07] 2025-07-27 13:43:35,175 | INFO     | ***************************************
[2025-07-27 09:44:07] 2025-07-27 13:43:35,175 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 09:44:07] 2025-07-27 13:43:35,176 | INFO     | ***************************************
[2025-07-27 09:44:07] 2025-07-27 13:43:35,176 | INFO     | 
[2025-07-27 09:44:07] 2025-07-27 13:43:35,182 | INFO     | architecture information:
[2025-07-27 09:44:07] 2025-07-27 13:43:35,183 | INFO     | executing command: cat /etc/os-release
[2025-07-27 09:44:07] 2025-07-27 13:43:35,205 | INFO     | cat /etc/os-release:
[2025-07-27 09:44:07] NAME="CentOS Linux"
[2025-07-27 09:44:07] VERSION="7 (Core)"
[2025-07-27 09:44:07] ID="centos"
[2025-07-27 09:44:07] ID_LIKE="rhel fedora"
[2025-07-27 09:44:07] VERSION_ID="7"
[2025-07-27 09:44:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 09:44:07] ANSI_COLOR="0;31"
[2025-07-27 09:44:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 09:44:07] HOME_URL="https://www.centos.org/"
[2025-07-27 09:44:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 09:44:07] 
[2025-07-27 09:44:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 09:44:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 09:44:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 09:44:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 09:44:07] 
[2025-07-27 09:44:07] 2025-07-27 13:43:35,206 | INFO     | ***************************************
[2025-07-27 09:44:07] 2025-07-27 13:43:35,709 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 09:44:07] 2025-07-27 13:43:35,757 | INFO     | sufficient remaining disk space (75942068224 B)
[2025-07-27 09:44:07] 2025-07-27 13:43:35,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 09:44:07] 2025-07-27 13:43:35,758 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 09:44:07] 2025-07-27 13:43:35,758 | INFO     | update_server=False
[2025-07-27 09:44:07] 2025-07-27 13:43:35,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 09:44:07] 2025-07-27 13:43:36,103 | INFO     | all job control threads have been joined
[2025-07-27 09:44:07] 2025-07-27 13:43:36,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:44:07] 2025-07-27 13:43:36,566 | INFO     | aborting loop
[2025-07-27 09:44:07] 2025-07-27 13:43:36,686 | INFO     | all data control threads have been joined
[2025-07-27 09:44:07] 2025-07-27 13:43:36,766 | INFO     | [job] retrieve thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:37,019 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 09:44:07] 2025-07-27 13:43:37,049 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:37,113 | INFO     | [job] control thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:37,146 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:37,211 | INFO     | all payload control threads have been joined
[2025-07-27 09:44:07] 2025-07-27 13:43:37,229 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:37,548 | INFO     | [job] validate thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:37,571 | INFO     | [job] job monitor thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:37,692 | INFO     | [data] control thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:37,735 | INFO     | [payload] validate_post thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:38,025 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:38,029 | INFO     | [data] copytool_in thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:38,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:44:07] 2025-07-27 13:43:38,217 | INFO     | [payload] control thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:38,373 | INFO     | [payload] failed_post thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:38,718 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 09:44:07] 2025-07-27 13:43:39,025 | INFO     | [data] copytool_out thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:39,170 | INFO     | [job] queue monitor thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:42,727 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 09:44:07] 2025-07-27 13:43:44,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140100361332544)>', '<ExcThread(monitor, started 140099861858048)>']
[2025-07-27 09:44:07] 2025-07-27 13:43:49,036 | INFO     | all workflow threads have been joined
[2025-07-27 09:44:07] 2025-07-27 13:43:49,036 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 09:44:07] 2025-07-27 13:43:49,037 | INFO     | traces error code: 0
[2025-07-27 09:44:07] 2025-07-27 13:43:49,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 09:44:07] 2025-07-27 13:44:06,509 | INFO     | PID=2994253 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 09:44:07] 2025-07-27 13:44:06,510 | INFO     | .. there are 21 such processes running
[2025-07-27 09:44:07] 2025-07-27 13:44:06,510 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 09:44:07] 2025-07-27 13:44:06,510 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 09:44:07] 2025-07-27 13:44:06,510 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 09:44:07] 2025-07-27 13:44:06,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 09:44:07] 2025-07-27 13:44:06,511 | INFO     | [monitor] control thread has ended
[2025-07-27 09:44:07] 2025-07-27 13:44:06,747 [wrapper] ==== pilot stdout END ====
[2025-07-27 09:44:07] 2025-07-27 13:44:06,757 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 09:44:07] 2025-07-27 13:44:06,769 [wrapper] pilotpid: 2994253
[2025-07-27 09:44:07] 2025-07-27 13:44:06,785 [wrapper] Pilot exit status: 0
[2025-07-27 09:44:07] 2025-07-27 13:44:06,821 [wrapper] pandaids: 6746446289
[2025-07-27 09:44:07] 2025-07-27 13:44:06,938 [wrapper] cleanup supervisor_pilot 3868076 2994254
[2025-07-27 09:44:07] 2025-07-27 13:44:06,942 [wrapper] Test setup, not cleaning
[2025-07-27 09:44:07] 2025-07-27 13:44:06,951 [wrapper] apfmon messages muted
[2025-07-27 09:44:07] 2025-07-27 13:44:06,967 [wrapper] ==== wrapper stdout END ====
[2025-07-27 09:44:07] 2025-07-27 13:44:06,973 [wrapper] ==== wrapper stderr END ====
[2025-07-27 09:44:07]  *** Error codes and diagnostics ***
[2025-07-27 09:44:07]     "exeErrorCode": 0,
[2025-07-27 09:44:07]     "exeErrorDiag": "",
[2025-07-27 09:44:07]     "pilotErrorCode": 0,
[2025-07-27 09:44:07]     "pilotErrorDiag": "",
[2025-07-27 09:44:07]  *** Listing of results directory ***
[2025-07-27 09:44:07] total 399556
[2025-07-27 09:44:07] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 03:44 pilot3.tar.gz
[2025-07-27 09:44:07] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 03:48 queuedata.json
[2025-07-27 09:44:07] -rwx------. 1 boincer umatlas     36292 Jul 27 03:48 runpilot2-wrapper.sh
[2025-07-27 09:44:07] -rw-r--r--. 1 boincer umatlas       100 Jul 27 06:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 09:44:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 06:17 run_atlas
[2025-07-27 09:44:07] -rw-r--r--. 1 boincer umatlas       105 Jul 27 06:17 job.xml
[2025-07-27 09:44:07] -rw-r--r--. 2 boincer umatlas 231259676 Jul 27 06:17 EVNT.45759097._000002.pool.root.1
[2025-07-27 09:44:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 06:17 start_atlas.sh
[2025-07-27 09:44:07] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 06:17 shared
[2025-07-27 09:44:07] -rw-r--r--. 2 boincer umatlas    542878 Jul 27 06:17 input.tar.gz
[2025-07-27 09:44:07] -rw-r--r--. 1 boincer umatlas         0 Jul 27 06:17 boinc_lockfile
[2025-07-27 09:44:07] -rw-r--r--. 1 boincer umatlas      2560 Jul 27 06:17 pandaJob.out
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas    980117 Jul 27 06:17 agis_schedconf.cvmfs.json
[2025-07-27 09:44:07] drwx------. 4 boincer umatlas      4096 Jul 27 06:17 pilot3
[2025-07-27 09:44:07] -rw-r--r--. 1 boincer umatlas      6841 Jul 27 09:40 init_data.xml
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas 171032743 Jul 27 09:42 HITS.45759100._000035.pool.root.1
[2025-07-27 09:44:07] -rw-r--r--. 1 boincer umatlas       530 Jul 27 09:42 boinc_task_state.xml
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas      1038 Jul 27 09:43 memory_monitor_summary.json
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas        95 Jul 27 09:43 pilot_heartbeat.json
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas   1593052 Jul 27 09:43 agis_ddmendpoints.agis.ALL.json
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas    405703 Jul 27 09:43 log.45759100._000035.job.log.tgz.1
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas      7809 Jul 27 09:43 heartbeat.json
[2025-07-27 09:44:07] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 09:44 boinc_mmap_file
[2025-07-27 09:44:07] -rw-r--r--. 1 boincer umatlas        28 Jul 27 09:44 wrapper_checkpoint.txt
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas       823 Jul 27 09:44 pilotlog.txt
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas   1085077 Jul 27 09:44 log.45759100._000035.job.log.1
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas       357 Jul 27 09:44 output.list
[2025-07-27 09:44:07] -rw-r--r--. 1 boincer umatlas       620 Jul 27 09:44 runtime_log
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas   1505280 Jul 27 09:44 result.tar.gz
[2025-07-27 09:44:07] -rw-r--r--. 1 boincer umatlas      8653 Jul 27 09:44 runtime_log.err
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas       656 Jul 27 09:44 HOOMDm0IB07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnfULDmZgA7on.diag
[2025-07-27 09:44:07] -rw-r--r--. 1 boincer umatlas     21278 Jul 27 09:44 stderr.txt
[2025-07-27 09:44:07] HITS file was successfully produced:
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas 171032743 Jul 27 09:42 shared/HITS.pool.root.1
[2025-07-27 09:44:07]  *** Contents of shared directory: ***
[2025-07-27 09:44:07] total 394892
[2025-07-27 09:44:07] -rw-r--r--. 2 boincer umatlas 231259676 Jul 27 06:17 ATLAS.root_0
[2025-07-27 09:44:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 06:17 start_atlas.sh
[2025-07-27 09:44:07] -rw-r--r--. 2 boincer umatlas    542878 Jul 27 06:17 input.tar.gz
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas 171032743 Jul 27 09:42 HITS.pool.root.1
[2025-07-27 09:44:07] -rw-------. 1 boincer umatlas   1505280 Jul 27 09:44 result.tar.gz
09:44:09 (2988791): run_atlas exited; CPU time 67192.301621
09:44:09 (2988791): called boinc_finish(0)

</stderr_txt>
]]>

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