Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:26:11 (507339): wrapper (7.7.26015): starting
03:26:11 (507339): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 03:26:12] Arguments: --nthreads 12
[2025-07-27 03:26:12] Threads: 12
[2025-07-27 03:26:12] Checking for CVMFS
[2025-07-27 03:26:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 03:26:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 03:26:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 03:26:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 03:26:13] 2.11.5.0 7157 37018 181552 148809 1 207 37690634 45568000 19865 130560 0 297411622 99.747 221788372 28762 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-27 03:26:13] CVMFS is ok
[2025-07-27 03:26:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 03:26:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 03:26:13] Further information can be found at the LHC@home message board.
[2025-07-27 03:26:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 03:26:13] Checking for apptainer binary...
[2025-07-27 03:26:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 03:26:13] Running /usr/bin/apptainer --version
[2025-07-27 03:26:13] apptainer version 1.4.1-1.el9
[2025-07-27 03:26:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 03:26:13] wns0083.triumf.lcg
[2025-07-27 03:26:13] apptainer works
[2025-07-27 03:26:13] Set ATHENA_PROC_NUMBER=12
[2025-07-27 03:26:13] Set ATHENA_CORE_NUMBER=12
[2025-07-27 03:26:13] Starting ATLAS job with PandaID=6746013617
[2025-07-27 03:26:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 03:31:51]  *** The last 200 lines of the pilot log: ***
[2025-07-27 03:31:51] 2025-07-27 10:31:18,579 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 03:31:51] 2025-07-27 10:31:18,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 03:31:51] 2025-07-27 10:31:18,579 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 03:31:51] 2025-07-27 10:31:18,579 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | WARNING  | wrong length of table data, x=[1753612096.0], y=[1652.0] (must be same and length>=4)
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | could have reported an average CPU frequency of 2493 MHz (4 samples)
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | ..............................
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . Timing measurements:
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . get job = 0 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . initial setup = 4 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . payload setup = 25 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . stage-in = 0 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . payload execution = 53 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . stage-out = 1 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,581 | INFO     | . log creation = 0 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,581 | INFO     | ..............................
[2025-07-27 03:31:51] 2025-07-27 10:31:18,581 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 03:31:51] 2025-07-27 10:31:18,581 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6746013617/pilotlog.txt
[2025-07-27 03:31:51] 2025-07-27 10:31:18,653 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-27 03:31:51] - Log from pilotlog.txt -
[2025-07-27 03:31:51] 2025-07-27 10:31:18,561 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6746013617/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:31:51] 2025-07-27 10:31:18,579 | INFO     | extracted standard info from prmon json
[2025-07-27 03:31:51] 2025-07-27 10:31:18,579 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 03:31:51] 2025-07-27 10:31:18,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 03:31:51] 2025-07-27 10:31:18,579 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 03:31:51] 2025-07-27 10:31:18,579 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | WARNING  | wrong length of table data, x=[1753612096.0], y=[1652.0] (must be same and length>=4)
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | could have reported an average CPU frequency of 2493 MHz (4 samples)
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | ..............................
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . Timing measurements:
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . get job = 0 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . initial setup = 4 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . payload setup = 25 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . stage-in = 0 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . payload execution = 53 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . stage-out = 1 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,581 | INFO     | . log creation = 0 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,581 | INFO     | ..............................
[2025-07-27 03:31:51] 2025-07-27 10:31:18,581 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 03:31:51] 2025-07-27 10:31:18,581 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6746013617/pilotlog.txt
[2025-07-27 03:31:51] 2025-07-27 10:31:18,653 | WARNING  | 
[2025-07-27 03:31:51] [begin log extracts]
[2025-07-27 03:31:51] - Log from pilotlog.txt -
[2025-07-27 03:31:51] 2025-07-27 10:31:18,561 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6746013617/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:31:51] 2025-07-27 10:31:18,579 | INFO     | extracted standard info from prmon json
[2025-07-27 03:31:51] 2025-07-27 10:31:18,579 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 03:31:51] 2025-07-27 10:31:18,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 03:31:51] 2025-07-27 10:31:18,579 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 03:31:51] 2025-07-27 10:31:18,579 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | WARNING  | wrong length of table data, x=[1753612096.0], y=[1652.0] (must be same and length>=4)
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | could have reported an average CPU frequency of 2493 MHz (4 samples)
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | ..............................
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . Timing measurements:
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . get job = 0 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . initial setup = 4 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . payload setup = 25 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . stage-in = 0 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . payload execution = 53 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,580 | INFO     | . stage-out = 1 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,581 | INFO     | . log creation = 0 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,581 | INFO     | ..............................
[2025-07-27 03:31:51] 2025-07-27 10:31:18,581 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 03:31:51] 2025-07-27 10:31:18,581 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6746013617/pilotlog.txt
[2025-07-27 03:31:51] [end log extracts]
[2025-07-27 03:31:51] 2025-07-27 10:31:18,653 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-27 03:31:51] 2025-07-27 10:31:18,654 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-27 03:31:51] 2025-07-27 10:31:18,878 | INFO     | 
[2025-07-27 03:31:51] 2025-07-27 10:31:18,878 | INFO     | job summary report
[2025-07-27 03:31:51] 2025-07-27 10:31:18,878 | INFO     | --------------------------------------------------
[2025-07-27 03:31:51] 2025-07-27 10:31:18,878 | INFO     | PanDA job id: 6746013617
[2025-07-27 03:31:51] 2025-07-27 10:31:18,878 | INFO     | task id: 45759981
[2025-07-27 03:31:51] 2025-07-27 10:31:18,878 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-27 03:28:43,202 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-27 03:31:51] 2025-07-27 10:31:18,878 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 03:31:51] 2025-07-27 10:31:18,878 | INFO     | pilot state: failed 
[2025-07-27 03:31:51] 2025-07-27 10:31:18,878 | INFO     | transexitcode: 65
[2025-07-27 03:31:51] 2025-07-27 10:31:18,878 | INFO     | exeerrorcode: 65
[2025-07-27 03:31:51] 2025-07-27 10:31:18,878 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 03:31:51] 2025-07-27 10:31:18,879 | INFO     | exitcode: 65
[2025-07-27 03:31:51] 2025-07-27 10:31:18,879 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 03:31:51] 2025-07-27 10:31:18,879 | INFO     | cpuconsumptiontime: 18 s
[2025-07-27 03:31:51] 2025-07-27 10:31:18,879 | INFO     | nevents: 0
[2025-07-27 03:31:51] 2025-07-27 10:31:18,879 | INFO     | neventsw: 0
[2025-07-27 03:31:51] 2025-07-27 10:31:18,879 | INFO     | pid: 526903
[2025-07-27 03:31:51] 2025-07-27 10:31:18,879 | INFO     | pgrp: 526903
[2025-07-27 03:31:51] 2025-07-27 10:31:18,879 | INFO     | corecount: 12
[2025-07-27 03:31:51] 2025-07-27 10:31:18,879 | INFO     | event service: False
[2025-07-27 03:31:51] 2025-07-27 10:31:18,879 | INFO     | sizes: {0: 2397189, 1: 2397273, 2: 2397444, 3: 2397500, 14: 2397500, 22: 2397790, 25: 2397946, 83: 2421202, 85: 2425494, 87: 2425522, 229: 2425688}
[2025-07-27 03:31:51] 2025-07-27 10:31:18,879 | INFO     | --------------------------------------------------
[2025-07-27 03:31:51] 2025-07-27 10:31:18,879 | INFO     | 
[2025-07-27 03:31:51] 2025-07-27 10:31:18,879 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-27 03:31:51] 2025-07-27 10:31:19,093 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,093 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,093 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,094 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 03:31:51] 2025-07-27 10:31:19,095 | INFO     | job 6746013617 has completed (purged errors)
[2025-07-27 03:31:51] 2025-07-27 10:31:19,095 | INFO     | overall cleanup function is called
[2025-07-27 03:31:51] 2025-07-27 10:31:20,102 | INFO     | --- collectZombieJob: --- 10, [526903]
[2025-07-27 03:31:51] 2025-07-27 10:31:20,102 | INFO     | zombie collector waiting for pid 526903
[2025-07-27 03:31:51] 2025-07-27 10:31:20,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 03:31:51] 2025-07-27 10:31:20,103 | INFO     | collected zombie processes
[2025-07-27 03:31:51] 2025-07-27 10:31:20,103 | INFO     | will attempt to kill all subprocesses of pid=526903
[2025-07-27 03:31:51] 2025-07-27 10:31:21,052 | INFO     | process IDs to be killed: [526903] (in reverse order)
[2025-07-27 03:31:51] 2025-07-27 10:31:21,167 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 03:31:51] 2025-07-27 10:31:21,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 03:31:51] 2025-07-27 10:31:21,188 | INFO     | did not find any defunct processes belonging to 526903
[2025-07-27 03:31:51] 2025-07-27 10:31:21,204 | INFO     | did not find any defunct processes belonging to 526903
[2025-07-27 03:31:51] 2025-07-27 10:31:21,204 | INFO     | ready for new job
[2025-07-27 03:31:51] 2025-07-27 10:31:21,204 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 03:31:51] 2025-07-27 10:31:21,206 | INFO     | ***************************************
[2025-07-27 03:31:51] 2025-07-27 10:31:21,206 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 03:31:51] 2025-07-27 10:31:21,206 | INFO     | ***************************************
[2025-07-27 03:31:51] 2025-07-27 10:31:21,206 | INFO     | 
[2025-07-27 03:31:51] 2025-07-27 10:31:21,234 | INFO     | architecture information:
[2025-07-27 03:31:51] 2025-07-27 10:31:21,248 | INFO     | executing command: cat /etc/os-release
[2025-07-27 03:31:51] 2025-07-27 10:31:21,310 | INFO     | cat /etc/os-release:
[2025-07-27 03:31:51] NAME="CentOS Linux"
[2025-07-27 03:31:51] VERSION="7 (Core)"
[2025-07-27 03:31:51] ID="centos"
[2025-07-27 03:31:51] ID_LIKE="rhel fedora"
[2025-07-27 03:31:51] VERSION_ID="7"
[2025-07-27 03:31:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 03:31:51] ANSI_COLOR="0;31"
[2025-07-27 03:31:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 03:31:51] HOME_URL="https://www.centos.org/"
[2025-07-27 03:31:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 03:31:51] 
[2025-07-27 03:31:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 03:31:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 03:31:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 03:31:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 03:31:51] 
[2025-07-27 03:31:51] 2025-07-27 10:31:21,311 | INFO     | ***************************************
[2025-07-27 03:31:51] 2025-07-27 10:31:21,814 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-27 03:31:51] 2025-07-27 10:31:21,871 | INFO     | sufficient remaining disk space (1831641022464 B)
[2025-07-27 03:31:51] 2025-07-27 10:31:21,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 03:31:51] 2025-07-27 10:31:21,871 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 03:31:51] 2025-07-27 10:31:21,871 | INFO     | update_server=False
[2025-07-27 03:31:51] 2025-07-27 10:31:21,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 03:31:51] 2025-07-27 10:31:21,872 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:31:51] 2025-07-27 10:31:21,872 | INFO     | aborting loop
[2025-07-27 03:31:51] 2025-07-27 10:31:22,007 | INFO     | all payload control threads have been joined
[2025-07-27 03:31:51] 2025-07-27 10:31:22,009 | INFO     | all data control threads have been joined
[2025-07-27 03:31:51] 2025-07-27 10:31:22,209 | INFO     | all job control threads have been joined
[2025-07-27 03:31:51] 2025-07-27 10:31:22,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 03:31:51] 2025-07-27 10:31:22,877 | INFO     | [job] retrieve thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:22,878 | INFO     | [job] job monitor thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:22,992 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:23,013 | INFO     | [payload] control thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:23,015 | INFO     | [data] control thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:23,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 03:31:51] 2025-07-27 10:31:23,215 | INFO     | [job] control thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:23,261 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:23,469 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:23,713 | INFO     | [payload] failed_post thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:23,892 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:31:51] 2025-07-27 10:31:24,062 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:24,217 | INFO     | [data] copytool_in thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:24,298 | INFO     | [job] validate thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:24,311 | INFO     | [payload] validate_post thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:24,898 | INFO     | [job] queue monitor thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:25,056 | INFO     | [data] copytool_out thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:26,859 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 03:31:51] 2025-07-27 10:31:27,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139907767166784)>', '<ExcThread(monitor, started 139907150378752)>']
[2025-07-27 03:31:51] 2025-07-27 10:31:32,733 | INFO     | all workflow threads have been joined
[2025-07-27 03:31:51] 2025-07-27 10:31:32,733 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 03:31:51] 2025-07-27 10:31:32,734 | INFO     | traces error code: 0
[2025-07-27 03:31:51] 2025-07-27 10:31:32,734 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 03:31:51] 2025-07-27 10:31:50,925 | INFO     | PID=512662 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 03:31:51] 2025-07-27 10:31:50,925 | INFO     | .. there are 28 such processes running
[2025-07-27 03:31:51] 2025-07-27 10:31:50,926 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 03:31:51] 2025-07-27 10:31:50,926 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 03:31:51] 2025-07-27 10:31:50,926 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 03:31:51] 2025-07-27 10:31:50,926 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 03:31:51] 2025-07-27 10:31:50,926 | INFO     | [monitor] control thread has ended
[2025-07-27 03:31:51] 2025-07-27 10:31:51,324 [wrapper] ==== pilot stdout END ====
[2025-07-27 03:31:51] 2025-07-27 10:31:51,326 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 03:31:51] 2025-07-27 10:31:51,328 [wrapper] pilotpid: 512662
[2025-07-27 03:31:51] 2025-07-27 10:31:51,330 [wrapper] Pilot exit status: 0
[2025-07-27 03:31:51] 2025-07-27 10:31:51,375 [wrapper] pandaids: 6746013617
[2025-07-27 03:31:51] 2025-07-27 10:31:51,631 [wrapper] cleanup supervisor_pilot  512668 512663
[2025-07-27 03:31:51] 2025-07-27 10:31:51,645 [wrapper] Test setup, not cleaning
[2025-07-27 03:31:51] 2025-07-27 10:31:51,648 [wrapper] apfmon messages muted
[2025-07-27 03:31:51] 2025-07-27 10:31:51,650 [wrapper] ==== wrapper stdout END ====
[2025-07-27 03:31:51] 2025-07-27 10:31:51,702 [wrapper] ==== wrapper stderr END ====
[2025-07-27 03:31:51]  *** Error codes and diagnostics ***
[2025-07-27 03:31:51]     "exeErrorCode": 65,
[2025-07-27 03:31:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 03:31:51]     "pilotErrorCode": 1305,
[2025-07-27 03:31:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 03:31:51]  *** Listing of results directory ***
[2025-07-27 03:31:51] total 205752
[2025-07-27 03:31:51] -rw-r--r--. 1 boinc boinc    530466 Jul 26 20:36 pilot3.tar.gz
[2025-07-27 03:31:51] -rw-r--r--. 1 boinc boinc      5112 Jul 26 21:16 queuedata.json
[2025-07-27 03:31:51] -rwx------. 1 boinc boinc     36292 Jul 26 21:18 runpilot2-wrapper.sh
[2025-07-27 03:31:51] -rw-r--r--. 1 boinc boinc       100 Jul 27 03:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 03:31:51] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 03:26 run_atlas
[2025-07-27 03:31:51] -rw-r--r--. 1 boinc boinc       105 Jul 27 03:26 job.xml
[2025-07-27 03:31:51] -rw-r--r--. 1 boinc boinc      6596 Jul 27 03:26 init_data.xml
[2025-07-27 03:31:51] -rw-r--r--. 2 boinc boinc 206608776 Jul 27 03:26 EVNT.45759979._000004.pool.root.1
[2025-07-27 03:31:51] -rw-r--r--. 2 boinc boinc     15095 Jul 27 03:26 start_atlas.sh
[2025-07-27 03:31:51] drwxrwx--x. 2 boinc boinc      4096 Jul 27 03:26 shared
[2025-07-27 03:31:51] -rw-r--r--. 2 boinc boinc    542873 Jul 27 03:26 input.tar.gz
[2025-07-27 03:31:51] -rw-r--r--. 1 boinc boinc         0 Jul 27 03:26 boinc_lockfile
[2025-07-27 03:31:51] -rw-r--r--. 1 boinc boinc      2560 Jul 27 03:26 pandaJob.out
[2025-07-27 03:31:51] -rw-------. 1 boinc boinc    980117 Jul 27 03:26 agis_schedconf.cvmfs.json
[2025-07-27 03:31:51] -rw-------. 1 boinc boinc   1593052 Jul 27 03:26 agis_ddmendpoints.agis.ALL.json
[2025-07-27 03:31:51] drwx------. 4 boinc boinc      4096 Jul 27 03:26 pilot3
[2025-07-27 03:31:51] -rw-r--r--. 1 boinc boinc       523 Jul 27 03:28 boinc_task_state.xml
[2025-07-27 03:31:51] -rw-------. 1 boinc boinc       978 Jul 27 03:28 memory_monitor_summary.json
[2025-07-27 03:31:51] -rw-------. 1 boinc boinc     21976 Jul 27 03:28 log.45759981._000079.job.log.tgz.1
[2025-07-27 03:31:51] -rw-------. 1 boinc boinc      8388 Jul 27 03:31 heartbeat.json
[2025-07-27 03:31:51] -rw-r--r--. 1 boinc boinc        22 Jul 27 03:31 wrapper_checkpoint.txt
[2025-07-27 03:31:51] -rw-------. 1 boinc boinc        95 Jul 27 03:31 pilot_heartbeat.json
[2025-07-27 03:31:51] -rw-------. 1 boinc boinc       822 Jul 27 03:31 pilotlog.txt
[2025-07-27 03:31:51] -rw-------. 1 boinc boinc     81881 Jul 27 03:31 log.45759981._000079.job.log.1
[2025-07-27 03:31:51] -rw-r--r--. 1 boinc boinc      8192 Jul 27 03:31 boinc_mmap_file
[2025-07-27 03:31:51] -rw-------. 1 boinc boinc       188 Jul 27 03:31 output.list
[2025-07-27 03:31:51] -rw-r--r--. 1 boinc boinc       620 Jul 27 03:31 runtime_log
[2025-07-27 03:31:51] -rw-------. 1 boinc boinc    122880 Jul 27 03:31 result.tar.gz
[2025-07-27 03:31:51] -rw-------. 1 boinc boinc       644 Jul 27 03:31 THyLDmx07z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmcu1KDmgDfuam.diag
[2025-07-27 03:31:51] -rw-r--r--. 1 boinc boinc      8485 Jul 27 03:31 runtime_log.err
[2025-07-27 03:31:51] -rw-r--r--. 1 boinc boinc     21829 Jul 27 03:31 stderr.txt
[2025-07-27 03:31:51] No HITS result produced
[2025-07-27 03:31:51]  *** Contents of shared directory: ***
[2025-07-27 03:31:51] total 202440
[2025-07-27 03:31:51] -rw-r--r--. 2 boinc boinc 206608776 Jul 27 03:26 ATLAS.root_0
[2025-07-27 03:31:51] -rw-r--r--. 2 boinc boinc     15095 Jul 27 03:26 start_atlas.sh
[2025-07-27 03:31:51] -rw-r--r--. 2 boinc boinc    542873 Jul 27 03:26 input.tar.gz
[2025-07-27 03:31:51] -rw-------. 1 boinc boinc    122880 Jul 27 03:31 result.tar.gz
03:31:53 (507339): run_atlas exited; CPU time 28.401065
03:31:53 (507339): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN