Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:37:47 (473379): wrapper (7.7.26015): starting
08:37:47 (473379): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 08:37:47] Arguments: --nthreads 4
[2025-07-29 08:37:47] Threads: 4
[2025-07-29 08:37:47] Checking for CVMFS
[2025-07-29 08:37:47] No cvmfs_config command found, will try listing directly
[2025-07-29 08:37:47] CVMFS is ok
[2025-07-29 08:37:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 08:37:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 08:37:47] Further information can be found at the LHC@home message board.
[2025-07-29 08:37:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 08:37:47] Checking for apptainer binary...
[2025-07-29 08:37:47] which: no apptainer in ((null))
[2025-07-29 08:37:47] apptainer is not installed, using version from CVMFS
[2025-07-29 08:37:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 08:37:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-07-29 08:37:47] apptainer works
[2025-07-29 08:37:47] Set ATHENA_PROC_NUMBER=4
[2025-07-29 08:37:47] Set ATHENA_CORE_NUMBER=4
[2025-07-29 08:37:47] Starting ATLAS job with PandaID=6746046625
[2025-07-29 08:37:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 12:19:10]  *** The last 200 lines of the pilot log: ***
[2025-07-29 12:19:10] 2025-07-29 10:17:27,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-29 12:19:10] 2025-07-29 10:17:27,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 12:19:10] 2025-07-29 10:17:27,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 12:19:10] 2025-07-29 10:17:27,221 | INFO     | fitting pss+swap vs Time
[2025-07-29 12:19:10] 2025-07-29 10:17:27,221 | INFO     | sum of square deviations: 3124858590.0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,222 | INFO     | sum of deviations: 17417741902.500004
[2025-07-29 12:19:10] 2025-07-29 10:17:27,223 | INFO     | mean x: 1753777673.5
[2025-07-29 12:19:10] 2025-07-29 10:17:27,223 | INFO     | mean y: 2297271.199074074
[2025-07-29 12:19:10] 2025-07-29 10:17:27,223 | INFO     | -- intersect: -9773136077.73526
[2025-07-29 12:19:10] 2025-07-29 10:17:27,223 | INFO     | intersect: -9773136077.73526
[2025-07-29 12:19:10] 2025-07-29 10:17:27,223 | INFO     | chi2: 2.152683168944572
[2025-07-29 12:19:10] 2025-07-29 10:17:27,224 | INFO     | sum of square deviations: 2912836010.0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,225 | INFO     | sum of deviations: 29172514462.0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,225 | INFO     | mean x: 1753777521.0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,225 | INFO     | mean y: 2305559.9004739337
[2025-07-29 12:19:10] 2025-07-29 10:17:27,225 | INFO     | -- intersect: -17562054369.343536
[2025-07-29 12:19:10] 2025-07-29 10:17:27,225 | INFO     | intersect: -17562054369.343536
[2025-07-29 12:19:10] 2025-07-29 10:17:27,226 | INFO     | chi2: 1.4891163652196926
[2025-07-29 12:19:10] 2025-07-29 10:17:27,226 | INFO     | current chi2=1.4891163652196926 (change=30.82510298300033 %)
[2025-07-29 12:19:10] 2025-07-29 10:17:27,226 | INFO     | sum of square deviations: 2710627567.5
[2025-07-29 12:19:10] 2025-07-29 10:17:27,227 | INFO     | sum of deviations: 28413922610.0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,228 | INFO     | mean x: 1753777368.5
[2025-07-29 12:19:10] 2025-07-29 10:17:27,228 | INFO     | mean y: 2304987.669902913
[2025-07-29 12:19:10] 2025-07-29 10:17:27,228 | INFO     | -- intersect: -18381516907.00964
[2025-07-29 12:19:10] 2025-07-29 10:17:27,228 | INFO     | intersect: -18381516907.00964
[2025-07-29 12:19:10] 2025-07-29 10:17:27,228 | INFO     | chi2: 1.4899071341643462
[2025-07-29 12:19:10] 2025-07-29 10:17:27,229 | INFO     | current chi2=1.4899071341643462 (change=-0.05310323377830253 %)
[2025-07-29 12:19:10] 2025-07-29 10:17:27,229 | INFO     | right removable region: 205
[2025-07-29 12:19:10] 2025-07-29 10:17:27,229 | INFO     | sum of square deviations: 2912836010.0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,230 | INFO     | sum of deviations: -13330319020.0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,230 | INFO     | mean x: 1753777826.0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,231 | INFO     | mean y: 2319152.3601895734
[2025-07-29 12:19:10] 2025-07-29 10:17:27,231 | INFO     | -- intersect: 8028317811.5782385
[2025-07-29 12:19:10] 2025-07-29 10:17:27,231 | INFO     | intersect: 8028317811.5782385
[2025-07-29 12:19:10] 2025-07-29 10:17:27,231 | INFO     | chi2: 0.6914780063032129
[2025-07-29 12:19:10] 2025-07-29 10:17:27,231 | INFO     | current chi2=0.6914780063032129 (change=67.87831965805566 %)
[2025-07-29 12:19:10] 2025-07-29 10:17:27,231 | INFO     | sum of square deviations: 2710627567.5
[2025-07-29 12:19:10] 2025-07-29 10:17:27,233 | INFO     | sum of deviations: -15019386999.0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,233 | INFO     | mean x: 1753777978.5
[2025-07-29 12:19:10] 2025-07-29 10:17:27,233 | INFO     | mean y: 2320405.485436893
[2025-07-29 12:19:10] 2025-07-29 10:17:27,236 | INFO     | -- intersect: 9719874556.13155
[2025-07-29 12:19:10] 2025-07-29 10:17:27,236 | INFO     | intersect: 9719874556.13155
[2025-07-29 12:19:10] 2025-07-29 10:17:27,236 | INFO     | chi2: 0.6828811116197852
[2025-07-29 12:19:10] 2025-07-29 10:17:27,236 | INFO     | current chi2=0.6828811116197852 (change=1.2432636475870773 %)
[2025-07-29 12:19:10] 2025-07-29 10:17:27,236 | INFO     | left removable region: 20
[2025-07-29 12:19:10] 2025-07-29 10:17:27,237 | INFO     | sum of square deviations: 1963274020.0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,238 | INFO     | sum of deviations: -2003822610.999999
[2025-07-29 12:19:10] 2025-07-29 10:17:27,238 | INFO     | mean x: 1753777948.0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,238 | INFO     | mean y: 2328733.972972973
[2025-07-29 12:19:10] 2025-07-29 10:17:27,238 | INFO     | -- intersect: 1792328434.0024068
[2025-07-29 12:19:10] 2025-07-29 10:17:27,238 | INFO     | intersect: 1792328434.0024068
[2025-07-29 12:19:10] 2025-07-29 10:17:27,238 | INFO     | chi2: 0.002849064088190381
[2025-07-29 12:19:10] 2025-07-29 10:17:27,239 | INFO     | -- intersect: 1792328434.0024068
[2025-07-29 12:19:10] 2025-07-29 10:17:27,239 | INFO     | current memory leak: -1.02 B/s (using 185 data points, chi2=0.00)
[2025-07-29 12:19:10] 2025-07-29 10:17:27,239 | INFO     | could have reported an average CPU frequency of 2704 MHz (11 samples)
[2025-07-29 12:19:10] 2025-07-29 10:17:27,239 | INFO     | ..............................
[2025-07-29 12:19:10] 2025-07-29 10:17:27,239 | INFO     | . Timing measurements:
[2025-07-29 12:19:10] 2025-07-29 10:17:27,239 | INFO     | . get job = 0 s
[2025-07-29 12:19:10] 2025-07-29 10:17:27,239 | INFO     | . initial setup = 1 s
[2025-07-29 12:19:10] 2025-07-29 10:17:27,240 | INFO     | . payload setup = 10 s
[2025-07-29 12:19:10] 2025-07-29 10:17:27,240 | INFO     | . stage-in = 0 s
[2025-07-29 12:19:10] 2025-07-29 10:17:27,240 | INFO     | . payload execution = 13124 s
[2025-07-29 12:19:10] 2025-07-29 10:17:27,240 | INFO     | . stage-out = 0 s
[2025-07-29 12:19:10] 2025-07-29 10:17:27,240 | INFO     | . log creation = 0 s
[2025-07-29 12:19:10] 2025-07-29 10:17:27,240 | INFO     | ..............................
[2025-07-29 12:19:10] 2025-07-29 10:17:27,586 | INFO     | 
[2025-07-29 12:19:10] 2025-07-29 10:17:27,586 | INFO     | job summary report
[2025-07-29 12:19:10] 2025-07-29 10:17:27,586 | INFO     | --------------------------------------------------
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | PanDA job id: 6746046625
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | task id: 45758433
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | errors: (none)
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | pilot state: finished 
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | transexitcode: 0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | exeerrorcode: 0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | exeerrordiag: 
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | exitcode: 0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | exitmsg: OK
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | cpuconsumptiontime: 50054 s
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | nevents: 400
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | neventsw: 0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | pid: 487005
[2025-07-29 12:19:10] 2025-07-29 10:17:27,587 | INFO     | pgrp: 487005
[2025-07-29 12:19:10] 2025-07-29 10:17:27,588 | INFO     | corecount: 4
[2025-07-29 12:19:10] 2025-07-29 10:17:27,588 | INFO     | event service: False
[2025-07-29 12:19:10] 2025-07-29 10:17:27,588 | INFO     | sizes: {0: 2391915, 7: 2392177, 11: 2392205, 13138: 2422982, 13139: 2432004, 13140: 2432060, 13148: 2432382}
[2025-07-29 12:19:10] 2025-07-29 10:17:27,588 | INFO     | --------------------------------------------------
[2025-07-29 12:19:10] 2025-07-29 10:17:27,588 | INFO     | 
[2025-07-29 12:19:10] 2025-07-29 10:17:27,588 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-07-29 12:19:10] 2025-07-29 10:17:27,617 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,618 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,618 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,618 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,618 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,618 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,618 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,619 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,619 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,619 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 12:19:10] 2025-07-29 10:17:27,619 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,619 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 12:19:10] 2025-07-29 10:17:27,619 | INFO     | job 6746046625 has completed (purged errors)
[2025-07-29 12:19:10] 2025-07-29 10:17:27,620 | INFO     | overall cleanup function is called
[2025-07-29 12:19:10] 2025-07-29 10:17:28,628 | INFO     | --- collectZombieJob: --- 10, [487005]
[2025-07-29 12:19:10] 2025-07-29 10:17:28,628 | INFO     | zombie collector waiting for pid 487005
[2025-07-29 12:19:10] 2025-07-29 10:17:28,628 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 12:19:10] 2025-07-29 10:17:28,628 | INFO     | collected zombie processes
[2025-07-29 12:19:10] 2025-07-29 10:17:28,628 | INFO     | will attempt to kill all subprocesses of pid=487005
[2025-07-29 12:19:10] 2025-07-29 10:17:29,266 | INFO     | process IDs to be killed: [487005] (in reverse order)
[2025-07-29 12:19:10] 2025-07-29 10:17:29,527 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 12:19:10] 2025-07-29 10:17:29,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 12:19:10] 2025-07-29 10:17:29,554 | INFO     | did not find any defunct processes belonging to 487005
[2025-07-29 12:19:10] 2025-07-29 10:17:29,575 | INFO     | did not find any defunct processes belonging to 487005
[2025-07-29 12:19:10] 2025-07-29 10:17:29,575 | INFO     | ready for new job
[2025-07-29 12:19:10] 2025-07-29 10:17:29,575 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 12:19:10] 2025-07-29 10:17:29,578 | INFO     | ***************************************
[2025-07-29 12:19:10] 2025-07-29 10:17:29,578 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 12:19:10] 2025-07-29 10:17:29,578 | INFO     | ***************************************
[2025-07-29 12:19:10] 2025-07-29 10:17:29,578 | INFO     | 
[2025-07-29 12:19:10] 2025-07-29 10:17:29,586 | INFO     | architecture information:
[2025-07-29 12:19:10] 2025-07-29 10:17:29,586 | INFO     | executing command: cat /etc/os-release
[2025-07-29 12:19:10] 2025-07-29 10:17:29,612 | INFO     | cat /etc/os-release:
[2025-07-29 12:19:10] NAME="CentOS Linux"
[2025-07-29 12:19:10] VERSION="7 (Core)"
[2025-07-29 12:19:10] ID="centos"
[2025-07-29 12:19:10] ID_LIKE="rhel fedora"
[2025-07-29 12:19:10] VERSION_ID="7"
[2025-07-29 12:19:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 12:19:10] ANSI_COLOR="0;31"
[2025-07-29 12:19:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 12:19:10] HOME_URL="https://www.centos.org/"
[2025-07-29 12:19:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 12:19:10] 
[2025-07-29 12:19:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 12:19:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 12:19:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 12:19:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 12:19:10] 
[2025-07-29 12:19:10] 2025-07-29 10:17:29,612 | INFO     | ***************************************
[2025-07-29 12:19:10] 2025-07-29 10:17:30,115 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-07-29 12:19:10] 2025-07-29 10:17:30,140 | INFO     | sufficient remaining disk space (3288216895488 B)
[2025-07-29 12:19:10] 2025-07-29 10:17:30,141 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 12:19:10] 2025-07-29 10:17:30,141 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 12:19:10] 2025-07-29 10:17:30,141 | INFO     | update_server=False
[2025-07-29 12:19:10] 2025-07-29 10:17:30,141 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 12:19:10] 2025-07-29 10:17:30,142 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 12:19:10] 2025-07-29 10:17:30,142 | INFO     | aborting loop
[2025-07-29 12:19:10] 2025-07-29 10:17:30,143 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 12:19:10] 2025-07-29 10:17:30,333 | INFO     | all data control threads have been joined
[2025-07-29 12:19:10] 2025-07-29 10:17:30,648 | INFO     | all job control threads have been joined
[2025-07-29 12:19:10] 2025-07-29 10:17:30,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 12:19:10] 2025-07-29 10:17:31,147 | INFO     | [job] retrieve thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:31,148 | INFO     | [job] job monitor thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:31,335 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:31,338 | INFO     | [data] control thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:31,419 | INFO     | all payload control threads have been joined
[2025-07-29 12:19:10] 2025-07-29 10:17:31,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:31,618 | INFO     | [data] copytool_in thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:31,653 | INFO     | [job] control thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:31,700 | INFO     | [job] validate thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:32,104 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:32,192 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:32,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 12:19:10] 2025-07-29 10:17:32,391 | INFO     | [payload] validate_post thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:32,424 | INFO     | [payload] control thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:32,544 | INFO     | [payload] failed_post thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:33,001 | INFO     | [data] copytool_out thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:33,354 | INFO     | [job] queue monitor thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:34,149 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 12:19:10] 2025-07-29 10:17:35,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23441332725568)>', '<ExcThread(monitor, started 23441096808192)>']
[2025-07-29 12:19:10] 2025-07-29 10:17:40,664 | INFO     | all workflow threads have been joined
[2025-07-29 12:19:10] 2025-07-29 10:17:40,664 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 12:19:10] 2025-07-29 10:17:40,664 | INFO     | traces error code: 0
[2025-07-29 12:19:10] 2025-07-29 10:17:40,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 12:19:10] 2025-07-29 10:18:01,067 | INFO     | PID=477265 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-29 12:19:10] 2025-07-29 10:18:01,067 | INFO     | .. there are 19 such processes running
[2025-07-29 12:19:10] 2025-07-29 10:18:01,068 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 12:19:10] 2025-07-29 10:18:01,068 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 12:19:10] 2025-07-29 10:18:01,068 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 12:19:10] 2025-07-29 10:18:01,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 12:19:10] 2025-07-29 10:18:01,069 | CRITICAL | thread 'MainThread' is not alive
[2025-07-29 12:19:10] 2025-07-29 10:18:01,069 | INFO     | [monitor] control thread has ended
[2025-07-29 12:19:10] 2025-07-29 10:18:01,209 [wrapper] ==== pilot stdout END ====
[2025-07-29 12:19:10] 2025-07-29 10:18:01,213 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 12:19:10] 2025-07-29 10:18:01,216 [wrapper] pilotpid: 477265
[2025-07-29 12:19:10] 2025-07-29 10:18:01,220 [wrapper] Pilot exit status: 0
[2025-07-29 12:19:10] 2025-07-29 10:18:01,239 [wrapper] pandaids: 6746046625
[2025-07-29 12:19:10] 2025-07-29 10:18:01,389 [wrapper] cleanup supervisor_pilot 1429707 477266
[2025-07-29 12:19:10] 2025-07-29 10:18:01,394 [wrapper] Test setup, not cleaning
[2025-07-29 12:19:10] 2025-07-29 10:18:01,398 [wrapper] apfmon messages muted
[2025-07-29 12:19:10] 2025-07-29 10:18:01,402 [wrapper] ==== wrapper stdout END ====
[2025-07-29 12:19:10] 2025-07-29 10:18:01,406 [wrapper] ==== wrapper stderr END ====
[2025-07-29 12:19:10]  *** Error codes and diagnostics ***
[2025-07-29 12:19:10]     "exeErrorCode": 0,
[2025-07-29 12:19:10]     "exeErrorDiag": "",
[2025-07-29 12:19:10]     "pilotErrorCode": 0,
[2025-07-29 12:19:10]     "pilotErrorDiag": "",
[2025-07-29 12:19:10]  *** Listing of results directory ***
[2025-07-29 12:19:10] total 402512
[2025-07-29 12:19:10] -rw-r--r-- 1 boinc boinc    530466 Jul 27 06:45 pilot3.tar.gz
[2025-07-29 12:19:10] -rw-r--r-- 1 boinc boinc      5112 Jul 27 06:56 queuedata.json
[2025-07-29 12:19:10] -rwx------ 1 boinc boinc     36292 Jul 27 06:57 runpilot2-wrapper.sh
[2025-07-29 12:19:10] -rw-r--r-- 1 boinc boinc       100 Jul 29 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 12:19:10] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 08:37 run_atlas
[2025-07-29 12:19:10] -rw-r--r-- 1 boinc boinc       105 Jul 29 08:37 job.xml
[2025-07-29 12:19:10] -rw-r--r-- 2 boinc boinc 235213484 Jul 29 08:37 EVNT.45758431._000003.pool.root.1
[2025-07-29 12:19:10] -rw-r--r-- 1 boinc boinc      6690 Jul 29 08:37 init_data.xml
[2025-07-29 12:19:10] -rw-r--r-- 2 boinc boinc     15095 Jul 29 08:37 start_atlas.sh
[2025-07-29 12:19:10] drwxrwx--x 2 boinc boinc      4096 Jul 29 08:37 shared
[2025-07-29 12:19:10] -rw-r--r-- 2 boinc boinc    542875 Jul 29 08:37 input.tar.gz
[2025-07-29 12:19:10] -rw-r--r-- 1 boinc boinc         0 Jul 29 08:37 boinc_lockfile
[2025-07-29 12:19:10] -rw-r--r-- 1 boinc boinc      2562 Jul 29 08:37 pandaJob.out
[2025-07-29 12:19:10] -rw------- 1 boinc boinc    977316 Jul 29 08:37 agis_schedconf.cvmfs.json
[2025-07-29 12:19:10] drwx------ 4 boinc boinc      4096 Jul 29 08:38 pilot3
[2025-07-29 12:19:10] -rw------- 1 boinc boinc 170026529 Jul 29 12:16 HITS.45758433._000057.pool.root.1
[2025-07-29 12:19:10] -rw-r--r-- 1 boinc boinc       529 Jul 29 12:17 boinc_task_state.xml
[2025-07-29 12:19:10] -rw------- 1 boinc boinc      1043 Jul 29 12:17 memory_monitor_summary.json
[2025-07-29 12:19:10] -rw------- 1 boinc boinc   1589827 Jul 29 12:17 agis_ddmendpoints.agis.ALL.json
[2025-07-29 12:19:10] -rw------- 1 boinc boinc    319328 Jul 29 12:17 log.45758433._000057.job.log.tgz.1
[2025-07-29 12:19:10] -rw------- 1 boinc boinc      7780 Jul 29 12:17 heartbeat.json
[2025-07-29 12:19:10] -rw------- 1 boinc boinc        95 Jul 29 12:18 pilot_heartbeat.json
[2025-07-29 12:19:10] -rw------- 1 boinc boinc       892 Jul 29 12:18 pilotlog.txt
[2025-07-29 12:19:10] -rw------- 1 boinc boinc   1211556 Jul 29 12:18 log.45758433._000057.job.log.1
[2025-07-29 12:19:10] -rw------- 1 boinc boinc       357 Jul 29 12:18 output.list
[2025-07-29 12:19:10] -rw-r--r-- 1 boinc boinc       620 Jul 29 12:18 runtime_log
[2025-07-29 12:19:10] -rw------- 1 boinc boinc   1546240 Jul 29 12:18 result.tar.gz
[2025-07-29 12:19:10] -rw-r--r-- 1 boinc boinc      9042 Jul 29 12:18 runtime_log.err
[2025-07-29 12:19:10] -rw------- 1 boinc boinc       666 Jul 29 12:18 rmfMDm1c8z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRIULDmdMieXo.diag
[2025-07-29 12:19:10] -rw-r--r-- 1 boinc boinc        27 Jul 29 12:19 wrapper_checkpoint.txt
[2025-07-29 12:19:10] -rw-r--r-- 1 boinc boinc      8192 Jul 29 12:19 boinc_mmap_file
[2025-07-29 12:19:10] -rw-r--r-- 1 boinc boinc     20652 Jul 29 12:19 stderr.txt
[2025-07-29 12:19:10] HITS file was successfully produced:
[2025-07-29 12:19:10] -rw------- 1 boinc boinc 170026529 Jul 29 12:16 shared/HITS.pool.root.1
[2025-07-29 12:19:10]  *** Contents of shared directory: ***
[2025-07-29 12:19:10] total 397816
[2025-07-29 12:19:10] -rw-r--r-- 2 boinc boinc 235213484 Jul 29 08:37 ATLAS.root_0
[2025-07-29 12:19:10] -rw-r--r-- 2 boinc boinc     15095 Jul 29 08:37 start_atlas.sh
[2025-07-29 12:19:10] -rw-r--r-- 2 boinc boinc    542875 Jul 29 08:37 input.tar.gz
[2025-07-29 12:19:10] -rw------- 1 boinc boinc 170026529 Jul 29 12:16 HITS.pool.root.1
[2025-07-29 12:19:10] -rw------- 1 boinc boinc   1546240 Jul 29 12:18 result.tar.gz
12:19:11 (473379): run_atlas exited; CPU time 50796.262427
12:19:11 (473379): called boinc_finish(0)

</stderr_txt>
]]>

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