Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:25:01 (2076994): wrapper (7.7.26015): starting
06:25:01 (2076994): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 06:25:01] Arguments: --nthreads 8
[2025-07-27 06:25:01] Threads: 8
[2025-07-27 06:25:01] Checking for CVMFS
[2025-07-27 06:25:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 06:25:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 06:25:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 06:25:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 06:25:01] 2.13.1.0 375772 14292 235064 148809 1 196 35569450 40960001 10198 16776704 0 72635247 99.760 69965372 40671 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 06:25:01] CVMFS is ok
[2025-07-27 06:25:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 06:25:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 06:25:01] Further information can be found at the LHC@home message board.
[2025-07-27 06:25:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 06:25:01] Checking for apptainer binary...
[2025-07-27 06:25:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 06:25:01] Running /usr/bin/apptainer --version
[2025-07-27 06:25:01] apptainer version 1.4.1-1.el9
[2025-07-27 06:25:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 06:25:01] c-212-1.aglt2.org
[2025-07-27 06:25:01] apptainer works
[2025-07-27 06:25:01] Set ATHENA_PROC_NUMBER=8
[2025-07-27 06:25:01] Set ATHENA_CORE_NUMBER=8
[2025-07-27 06:25:01] Starting ATLAS job with PandaID=6745939207
[2025-07-27 06:25:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 08:00:12]  *** The last 200 lines of the pilot log: ***
[2025-07-27 08:00:12]  replicas=None
[2025-07-27 08:00:12]  scope=mc23_13p6TeV
[2025-07-27 08:00:12]  status=None
[2025-07-27 08:00:12]  status_code=0
[2025-07-27 08:00:12]  storage_token=
[2025-07-27 08:00:12]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6745939207/log.45758350._000012.job.log.tgz.1
[2025-07-27 08:00:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/8d/log.45758350._000012.job.log.tgz.1
[2025-07-27 08:00:12]  workdir=None
[2025-07-27 08:00:12] ]
[2025-07-27 08:00:12] 2025-07-27 11:59:31,943 | INFO     | transferring file log.45758350._000012.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6745939207/log.45758350._000012.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 08:00:12] 2025-07-27 11:59:31,943 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6745939207/log.45758350._000012.job.log.tgz.1 /tmp/boinchome/slots/3/log.45758350._000012.job
[2025-07-27 08:00:12] 2025-07-27 11:59:31,968 | INFO     | adding to output.list: log.45758350._000012.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/8d/log.45758350._000012.job.log.tg
[2025-07-27 08:00:12] 2025-07-27 11:59:31,969 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 08:00:12] 2025-07-27 11:59:31,969 | INFO     | summary of transferred files:
[2025-07-27 08:00:12] 2025-07-27 11:59:31,969 | INFO     |  -- lfn=log.45758350._000012.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 08:00:12] 2025-07-27 11:59:31,969 | INFO     | stage-out finished correctly
[2025-07-27 08:00:12] 2025-07-27 11:59:32,813 | INFO     | monitor loop #415: job 0:6745939207 is in state 'finished'
[2025-07-27 08:00:12] 2025-07-27 11:59:32,814 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:00:12] 2025-07-27 11:59:35,169 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 08:00:12] 2025-07-27 11:59:35,253 | INFO     | job 6745939207 has state=finished
[2025-07-27 08:00:12] 2025-07-27 11:59:35,253 | INFO     | preparing for final server update for job 6745939207 in state='finished'
[2025-07-27 08:00:12] 2025-07-27 11:59:35,253 | INFO     | this job has now completed (state=finished)
[2025-07-27 08:00:12] 2025-07-27 11:59:35,254 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 08:00:12] 2025-07-27 11:59:35,254 | INFO     | log transfer has been attempted: DONE
[2025-07-27 08:00:12] 2025-07-27 11:59:35,254 | INFO     | job 6745939207 has finished - writing final server update
[2025-07-27 08:00:12] 2025-07-27 11:59:35,255 | INFO     | total number of processed events: 400 (read)
[2025-07-27 08:00:12] 2025-07-27 11:59:35,255 | INFO     | executing command: lscpu
[2025-07-27 08:00:12] 2025-07-27 11:59:35,318 | INFO     | monitor loop #416: job 0:6745939207 is in state 'finished'
[2025-07-27 08:00:12] 2025-07-27 11:59:35,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:00:12] 2025-07-27 11:59:35,326 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 08:00:12] 2025-07-27 11:59:37,823 | INFO     | monitor loop #417: job 0:6745939207 is in state 'finished'
[2025-07-27 08:00:12] 2025-07-27 11:59:37,823 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:00:12] 2025-07-27 11:59:40,325 | INFO     | monitor loop #418: job 0:6745939207 is in state 'finished'
[2025-07-27 08:00:12] 2025-07-27 11:59:40,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:00:12] 2025-07-27 11:59:40,348 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 08:00:12] 2025-07-27 11:59:40,354 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3280.7935625000005
[2025-07-27 08:00:12] 2025-07-27 11:59:40,369 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6745939207/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 08:00:12] 2025-07-27 11:59:40,370 | INFO     | extracted standard info from prmon json
[2025-07-27 08:00:12] 2025-07-27 11:59:40,370 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 08:00:12] 2025-07-27 11:59:40,371 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 08:00:12] 2025-07-27 11:59:40,371 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 08:00:12] 2025-07-27 11:59:40,371 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 08:00:12] 2025-07-27 11:59:40,373 | INFO     | fitting pss+swap vs Time
[2025-07-27 08:00:12] 2025-07-27 11:59:40,373 | INFO     | sum of square deviations: 197203697.5
[2025-07-27 08:00:12] 2025-07-27 11:59:40,373 | INFO     | sum of deviations: -5768837130.5
[2025-07-27 08:00:12] 2025-07-27 11:59:40,374 | INFO     | mean x: 1753614841.5
[2025-07-27 08:00:12] 2025-07-27 11:59:40,374 | INFO     | mean y: 2576635.1279069767
[2025-07-27 08:00:12] 2025-07-27 11:59:40,374 | INFO     | -- intersect: 51301403880.702614
[2025-07-27 08:00:12] 2025-07-27 11:59:40,374 | INFO     | intersect: 51301403880.702614
[2025-07-27 08:00:12] 2025-07-27 11:59:40,374 | INFO     | chi2: 0.015108337205853231
[2025-07-27 08:00:12] 2025-07-27 11:59:40,374 | INFO     | -- intersect: 51301403880.702614
[2025-07-27 08:00:12] 2025-07-27 11:59:40,374 | INFO     | current memory leak: -29.25 B/s (using 86 data points, chi2=0.02)
[2025-07-27 08:00:12] 2025-07-27 11:59:40,374 | INFO     | could have reported an average CPU frequency of 3281 MHz (7 samples)
[2025-07-27 08:00:12] 2025-07-27 11:59:40,375 | INFO     | ..............................
[2025-07-27 08:00:12] 2025-07-27 11:59:40,375 | INFO     | . Timing measurements:
[2025-07-27 08:00:12] 2025-07-27 11:59:40,375 | INFO     | . get job = 0 s
[2025-07-27 08:00:12] 2025-07-27 11:59:40,375 | INFO     | . initial setup = 2 s
[2025-07-27 08:00:12] 2025-07-27 11:59:40,375 | INFO     | . payload setup = 8 s
[2025-07-27 08:00:12] 2025-07-27 11:59:40,375 | INFO     | . stage-in = 0 s
[2025-07-27 08:00:12] 2025-07-27 11:59:40,375 | INFO     | . payload execution = 5628 s
[2025-07-27 08:00:12] 2025-07-27 11:59:40,375 | INFO     | . stage-out = 0 s
[2025-07-27 08:00:12] 2025-07-27 11:59:40,375 | INFO     | . log creation = 0 s
[2025-07-27 08:00:12] 2025-07-27 11:59:40,375 | INFO     | ..............................
[2025-07-27 08:00:12] 2025-07-27 11:59:40,457 | INFO     | 
[2025-07-27 08:00:12] 2025-07-27 11:59:40,458 | INFO     | job summary report
[2025-07-27 08:00:12] 2025-07-27 11:59:40,458 | INFO     | --------------------------------------------------
[2025-07-27 08:00:12] 2025-07-27 11:59:40,458 | INFO     | PanDA job id: 6745939207
[2025-07-27 08:00:12] 2025-07-27 11:59:40,458 | INFO     | task id: 45758350
[2025-07-27 08:00:12] 2025-07-27 11:59:40,459 | INFO     | errors: (none)
[2025-07-27 08:00:12] 2025-07-27 11:59:40,459 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 08:00:12] 2025-07-27 11:59:40,459 | INFO     | pilot state: finished 
[2025-07-27 08:00:12] 2025-07-27 11:59:40,459 | INFO     | transexitcode: 0
[2025-07-27 08:00:12] 2025-07-27 11:59:40,459 | INFO     | exeerrorcode: 0
[2025-07-27 08:00:12] 2025-07-27 11:59:40,459 | INFO     | exeerrordiag: 
[2025-07-27 08:00:12] 2025-07-27 11:59:40,459 | INFO     | exitcode: 0
[2025-07-27 08:00:12] 2025-07-27 11:59:40,459 | INFO     | exitmsg: OK
[2025-07-27 08:00:12] 2025-07-27 11:59:40,459 | INFO     | cpuconsumptiontime: 37850 s
[2025-07-27 08:00:12] 2025-07-27 11:59:40,459 | INFO     | nevents: 400
[2025-07-27 08:00:12] 2025-07-27 11:59:40,459 | INFO     | neventsw: 0
[2025-07-27 08:00:12] 2025-07-27 11:59:40,459 | INFO     | pid: 2089403
[2025-07-27 08:00:12] 2025-07-27 11:59:40,459 | INFO     | pgrp: 2089403
[2025-07-27 08:00:12] 2025-07-27 11:59:40,459 | INFO     | corecount: 8
[2025-07-27 08:00:12] 2025-07-27 11:59:40,460 | INFO     | event service: False
[2025-07-27 08:00:12] 2025-07-27 11:59:40,460 | INFO     | sizes: {0: 2397482, 5: 2397744, 11: 2397800, 5640: 2424304, 5642: 2433302, 5645: 2433358, 5650: 2433680}
[2025-07-27 08:00:12] 2025-07-27 11:59:40,460 | INFO     | --------------------------------------------------
[2025-07-27 08:00:12] 2025-07-27 11:59:40,460 | INFO     | 
[2025-07-27 08:00:12] 2025-07-27 11:59:40,460 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-07-27 08:00:12] 2025-07-27 11:59:40,488 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,488 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,488 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,488 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,488 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,488 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,489 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,489 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,489 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,489 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,489 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,489 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,489 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,489 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,489 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,489 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,489 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,489 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 08:00:12] 2025-07-27 11:59:40,490 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,490 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 08:00:12] 2025-07-27 11:59:40,490 | INFO     | job 6745939207 has completed (purged errors)
[2025-07-27 08:00:12] 2025-07-27 11:59:40,490 | INFO     | overall cleanup function is called
[2025-07-27 08:00:12] 2025-07-27 11:59:41,498 | INFO     | --- collectZombieJob: --- 10, [2089403]
[2025-07-27 08:00:12] 2025-07-27 11:59:41,499 | INFO     | zombie collector waiting for pid 2089403
[2025-07-27 08:00:12] 2025-07-27 11:59:41,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 08:00:12] 2025-07-27 11:59:41,499 | INFO     | collected zombie processes
[2025-07-27 08:00:12] 2025-07-27 11:59:41,499 | INFO     | will attempt to kill all subprocesses of pid=2089403
[2025-07-27 08:00:12] 2025-07-27 11:59:41,889 | INFO     | process IDs to be killed: [2089403] (in reverse order)
[2025-07-27 08:00:12] 2025-07-27 11:59:42,019 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 08:00:12] 2025-07-27 11:59:42,020 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 08:00:12] 2025-07-27 11:59:42,036 | INFO     | did not find any defunct processes belonging to 2089403
[2025-07-27 08:00:12] 2025-07-27 11:59:42,050 | INFO     | did not find any defunct processes belonging to 2089403
[2025-07-27 08:00:12] 2025-07-27 11:59:42,051 | INFO     | ready for new job
[2025-07-27 08:00:12] 2025-07-27 11:59:42,051 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 08:00:12] 2025-07-27 11:59:42,053 | INFO     | ***************************************
[2025-07-27 08:00:12] 2025-07-27 11:59:42,053 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 08:00:12] 2025-07-27 11:59:42,053 | INFO     | ***************************************
[2025-07-27 08:00:12] 2025-07-27 11:59:42,053 | INFO     | 
[2025-07-27 08:00:12] 2025-07-27 11:59:42,058 | INFO     | architecture information:
[2025-07-27 08:00:12] 2025-07-27 11:59:42,058 | INFO     | executing command: cat /etc/os-release
[2025-07-27 08:00:12] 2025-07-27 11:59:42,080 | INFO     | cat /etc/os-release:
[2025-07-27 08:00:12] NAME="CentOS Linux"
[2025-07-27 08:00:12] VERSION="7 (Core)"
[2025-07-27 08:00:12] ID="centos"
[2025-07-27 08:00:12] ID_LIKE="rhel fedora"
[2025-07-27 08:00:12] VERSION_ID="7"
[2025-07-27 08:00:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 08:00:12] ANSI_COLOR="0;31"
[2025-07-27 08:00:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 08:00:12] HOME_URL="https://www.centos.org/"
[2025-07-27 08:00:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 08:00:12] 
[2025-07-27 08:00:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 08:00:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 08:00:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 08:00:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 08:00:12] 
[2025-07-27 08:00:12] 2025-07-27 11:59:42,080 | INFO     | ***************************************
[2025-07-27 08:00:12] 2025-07-27 11:59:42,584 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-07-27 08:00:12] 2025-07-27 11:59:42,612 | INFO     | sufficient remaining disk space (123814805504 B)
[2025-07-27 08:00:12] 2025-07-27 11:59:42,612 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 08:00:12] 2025-07-27 11:59:42,612 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 08:00:12] 2025-07-27 11:59:42,612 | INFO     | update_server=False
[2025-07-27 08:00:12] 2025-07-27 11:59:42,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 08:00:12] 2025-07-27 11:59:42,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 08:00:12] 2025-07-27 11:59:42,830 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 08:00:12] 2025-07-27 11:59:42,830 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 08:00:12] 2025-07-27 11:59:42,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:00:12] 2025-07-27 11:59:42,830 | INFO     | will abort loop
[2025-07-27 08:00:12] 2025-07-27 11:59:43,586 | INFO     | all payload control threads have been joined
[2025-07-27 08:00:12] 2025-07-27 11:59:43,609 | INFO     | all data control threads have been joined
[2025-07-27 08:00:12] 2025-07-27 11:59:43,613 | INFO     | [job] retrieve thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:43,818 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:43,825 | INFO     | all job control threads have been joined
[2025-07-27 08:00:12] 2025-07-27 11:59:43,836 | INFO     | [job] job monitor thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:43,926 | INFO     | [payload] failed_post thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:43,978 | INFO     | [job] validate thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:44,249 | INFO     | [payload] validate_post thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:44,411 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:44,593 | INFO     | [payload] control thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:44,614 | INFO     | [data] control thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:44,618 | INFO     | [data] copytool_out thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:44,795 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:44,831 | INFO     | [job] control thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:44,921 | INFO     | [data] copytool_in thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:45,471 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:00:12] 2025-07-27 11:59:45,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 08:00:12] 2025-07-27 11:59:46,477 | INFO     | [job] queue monitor thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:49,778 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:52,812 | INFO     | job.realtimelogging is not enabled
[2025-07-27 08:00:12] 2025-07-27 11:59:53,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 08:00:12] 2025-07-27 11:59:54,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139706987235136)>', '<ExcThread(monitor, started 139706218047232)>']
[2025-07-27 08:00:12] 2025-07-27 11:59:59,402 | INFO     | all workflow threads have been joined
[2025-07-27 08:00:12] 2025-07-27 11:59:59,403 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 08:00:12] 2025-07-27 11:59:59,404 | INFO     | traces error code: 0
[2025-07-27 08:00:12] 2025-07-27 11:59:59,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 08:00:12] 2025-07-27 12:00:12,241 | INFO     | PID=2080795 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 08:00:12] 2025-07-27 12:00:12,242 | INFO     | .. there are 13 such processes running
[2025-07-27 08:00:12] 2025-07-27 12:00:12,242 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 08:00:12] 2025-07-27 12:00:12,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 08:00:12] 2025-07-27 12:00:12,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 08:00:12] 2025-07-27 12:00:12,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 08:00:12] 2025-07-27 12:00:12,243 | INFO     | [monitor] control thread has ended
[2025-07-27 08:00:12] 2025-07-27 12:00:12,386 [wrapper] ==== pilot stdout END ====
[2025-07-27 08:00:12] 2025-07-27 12:00:12,392 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 08:00:12] 2025-07-27 12:00:12,395 [wrapper] pilotpid: 2080795
[2025-07-27 08:00:12] 2025-07-27 12:00:12,398 [wrapper] Pilot exit status: 0
[2025-07-27 08:00:12] 2025-07-27 12:00:12,415 [wrapper] pandaids: 6745939207
[2025-07-27 08:00:12] 2025-07-27 12:00:12,496 [wrapper] cleanup supervisor_pilot 2409964 2080796
[2025-07-27 08:00:12] 2025-07-27 12:00:12,500 [wrapper] Test setup, not cleaning
[2025-07-27 08:00:12] 2025-07-27 12:00:12,504 [wrapper] apfmon messages muted
[2025-07-27 08:00:12] 2025-07-27 12:00:12,509 [wrapper] ==== wrapper stdout END ====
[2025-07-27 08:00:12] 2025-07-27 12:00:12,513 [wrapper] ==== wrapper stderr END ====
[2025-07-27 08:00:12]  *** Error codes and diagnostics ***
[2025-07-27 08:00:12]     "exeErrorCode": 0,
[2025-07-27 08:00:12]     "exeErrorDiag": "",
[2025-07-27 08:00:12]     "pilotErrorCode": 0,
[2025-07-27 08:00:12]     "pilotErrorDiag": "",
[2025-07-27 08:00:12]  *** Listing of results directory ***
[2025-07-27 08:00:12] total 415348
[2025-07-27 08:00:12] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:08 queuedata.json
[2025-07-27 08:00:12] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 21:08 pilot3.tar.gz
[2025-07-27 08:00:12] -rwx------. 1 boincer umatlas     36292 Jul 26 21:10 runpilot2-wrapper.sh
[2025-07-27 08:00:12] -rw-r--r--. 1 boincer umatlas       100 Jul 27 06:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 08:00:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 06:25 run_atlas
[2025-07-27 08:00:12] -rw-r--r--. 1 boincer umatlas       105 Jul 27 06:25 job.xml
[2025-07-27 08:00:12] -rw-r--r--. 2 boincer umatlas 241344257 Jul 27 06:25 EVNT.45758348._000001.pool.root.1
[2025-07-27 08:00:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 06:25 start_atlas.sh
[2025-07-27 08:00:12] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 06:25 shared
[2025-07-27 08:00:12] -rw-r--r--. 2 boincer umatlas    542890 Jul 27 06:25 input.tar.gz
[2025-07-27 08:00:12] -rw-r--r--. 1 boincer umatlas         0 Jul 27 06:25 boinc_lockfile
[2025-07-27 08:00:12] -rw-r--r--. 1 boincer umatlas      2576 Jul 27 06:25 pandaJob.out
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas    980117 Jul 27 06:25 agis_schedconf.cvmfs.json
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas   1593052 Jul 27 06:25 agis_ddmendpoints.agis.ALL.json
[2025-07-27 08:00:12] drwx------. 4 boincer umatlas      4096 Jul 27 06:25 pilot3
[2025-07-27 08:00:12] -rw-r--r--. 1 boincer umatlas      6945 Jul 27 07:54 init_data.xml
[2025-07-27 08:00:12] -rw-r--r--. 1 boincer umatlas       529 Jul 27 07:59 boinc_task_state.xml
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas 178372660 Jul 27 07:59 HITS.45758350._000012.pool.root.1
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas        95 Jul 27 07:59 pilot_heartbeat.json
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas      1051 Jul 27 07:59 memory_monitor_summary.json
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas    314753 Jul 27 07:59 log.45758350._000012.job.log.tgz.1
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas      7748 Jul 27 07:59 heartbeat.json
[2025-07-27 08:00:12] -rw-r--r--. 1 boincer umatlas        27 Jul 27 08:00 wrapper_checkpoint.txt
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas       823 Jul 27 08:00 pilotlog.txt
[2025-07-27 08:00:12] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 08:00 boinc_mmap_file
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas    547201 Jul 27 08:00 log.45758350._000012.job.log.1
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas       357 Jul 27 08:00 output.list
[2025-07-27 08:00:12] -rw-r--r--. 1 boincer umatlas       620 Jul 27 08:00 runtime_log
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas    880640 Jul 27 08:00 result.tar.gz
[2025-07-27 08:00:12] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 08:00 runtime_log.err
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas       651 Jul 27 08:00 FX4KDm744z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3lTLDm3xO78n.diag
[2025-07-27 08:00:12] -rw-r--r--. 1 boincer umatlas     21861 Jul 27 08:00 stderr.txt
[2025-07-27 08:00:12] HITS file was successfully produced:
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas 178372660 Jul 27 07:59 shared/HITS.pool.root.1
[2025-07-27 08:00:12]  *** Contents of shared directory: ***
[2025-07-27 08:00:12] total 411300
[2025-07-27 08:00:12] -rw-r--r--. 2 boincer umatlas 241344257 Jul 27 06:25 ATLAS.root_0
[2025-07-27 08:00:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 06:25 start_atlas.sh
[2025-07-27 08:00:12] -rw-r--r--. 2 boincer umatlas    542890 Jul 27 06:25 input.tar.gz
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas 178372660 Jul 27 07:59 HITS.pool.root.1
[2025-07-27 08:00:12] -rw-------. 1 boincer umatlas    880640 Jul 27 08:00 result.tar.gz
08:00:14 (2076994): run_atlas exited; CPU time 37992.447879
08:00:14 (2076994): called boinc_finish(0)

</stderr_txt>
]]>

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