Name d1uLDmvr5z7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6l1KDmXe97jm_2
Workunit 233822141
Created 27 Jul 2025, 7:34:08 UTC
Sent 27 Jul 2025, 10:13:24 UTC
Report deadline 4 Aug 2025, 10:13:24 UTC
Received 28 Jul 2025, 1:53:33 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10857728
Run time 57 min 8 sec
CPU time 10 hours 20 min 52 sec
Validate state Valid
Credit 433.96
Device peak FLOPS 53.76 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.87 GB
Peak swap size 3.20 GB
Peak disk usage 616.07 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:55:44 (1151534): wrapper (7.7.26015): starting
01:55:44 (1151534): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 01:55:44] Arguments: --nthreads 12
[2025-07-28 01:55:44] Threads: 12
[2025-07-28 01:55:44] Checking for CVMFS
[2025-07-28 01:55:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 01:55:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 01:55:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 01:55:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 01:55:44] 2.13.1.0 1072336 8649 83972 148828 2 57 2213078 4097025 0 130560 0 10644886 99.988 316854 7488 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-28 01:55:44] CVMFS is ok
[2025-07-28 01:55:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 01:55:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 01:55:44] Further information can be found at the LHC@home message board.
[2025-07-28 01:55:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 01:55:44] Checking for apptainer binary...
[2025-07-28 01:55:44] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-28 01:55:44] apptainer is not installed, using version from CVMFS
[2025-07-28 01:55:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 01:55:44] pckelar2.cern.ch
[2025-07-28 01:55:44] apptainer works
[2025-07-28 01:55:44] Set ATHENA_PROC_NUMBER=12
[2025-07-28 01:55:44] Set ATHENA_CORE_NUMBER=12
[2025-07-28 01:55:44] Starting ATLAS job with PandaID=6745950149
[2025-07-28 01:55:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 02:52:49]  *** The last 200 lines of the pilot log: ***
[2025-07-28 02:52:49]  storage_token=
[2025-07-28 02:52:49]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6745950149/log.45758441._000046.job.log.tgz.1
[2025-07-28 02:52:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/6b/log.45758441._000046.job.log.tgz.1
[2025-07-28 02:52:49]  workdir=None
[2025-07-28 02:52:49] ]
[2025-07-28 02:52:49] 2025-07-28 00:52:26,571 | INFO     | transferring file log.45758441._000046.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6745950149/log.45758441._000046.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 02:52:49] 2025-07-28 00:52:26,571 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6745950149/log.45758441._000046.job.log.tgz.1 /var/lib/boinc/slots/0/log.45758441._000046.job
[2025-07-28 02:52:49] 2025-07-28 00:52:26,584 | INFO     | adding to output.list: log.45758441._000046.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/6b/log.45758441._000046.job.log.tg
[2025-07-28 02:52:49] 2025-07-28 00:52:26,585 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 02:52:49] 2025-07-28 00:52:26,585 | INFO     | summary of transferred files:
[2025-07-28 02:52:49] 2025-07-28 00:52:26,585 | INFO     |  -- lfn=log.45758441._000046.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 02:52:49] 2025-07-28 00:52:26,585 | INFO     | stage-out finished correctly
[2025-07-28 02:52:49] 2025-07-28 00:52:28,669 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 02:52:49] 2025-07-28 00:52:30,066 | WARNING  | process 1162541 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 02:52:49] 2025-07-28 00:52:30,066 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745950149/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 02:52:49] 2025-07-28 00:52:30,067 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745950149/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 02:52:49] 2025-07-28 00:52:30,067 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4516876 B
[2025-07-28 02:52:49] 2025-07-28 00:52:30,067 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16255 B
[2025-07-28 02:52:49] 2025-07-28 00:52:30,067 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 02:52:49] 2025-07-28 00:52:30,079 | INFO     | sufficient remaining disk space (232756609024 B)
[2025-07-28 02:52:49] 2025-07-28 00:52:30,079 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-28 02:52:49] 2025-07-28 00:52:30,080 | INFO     | size of work directory /var/lib/boinc/slots/0/PanDA_Pilot-6745950149: 4806084 B (within 2537553920 B limit)
[2025-07-28 02:52:49] 2025-07-28 00:52:30,080 | INFO     | pfn file=/var/lib/boinc/slots/0/PanDA_Pilot-6745950149/HITS.45758441._000046.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-28 02:52:49] 2025-07-28 00:52:30,080 | INFO     | total size of present files: 0 B (workdir size: 4806084 B)
[2025-07-28 02:52:49] 2025-07-28 00:52:30,080 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6745950149/HITS.45758441._000046.pool.root.1 since it does not exist
[2025-07-28 02:52:49] 2025-07-28 00:52:30,083 | INFO     | job 6745950149 has state=finished
[2025-07-28 02:52:49] 2025-07-28 00:52:30,083 | INFO     | preparing for final server update for job 6745950149 in state='finished'
[2025-07-28 02:52:49] 2025-07-28 00:52:30,083 | INFO     | this job has now completed (state=finished)
[2025-07-28 02:52:49] 2025-07-28 00:52:30,083 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 02:52:49] 2025-07-28 00:52:30,084 | INFO     | log transfer has been attempted: DONE
[2025-07-28 02:52:49] 2025-07-28 00:52:30,084 | INFO     | job 6745950149 has finished - writing final server update
[2025-07-28 02:52:49] 2025-07-28 00:52:30,084 | INFO     | total number of processed events: 400 (read)
[2025-07-28 02:52:49] 2025-07-28 00:52:30,085 | INFO     | executing command: lscpu
[2025-07-28 02:52:49] 2025-07-28 00:52:30,104 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 02:52:49] 2025-07-28 00:52:30,168 | INFO     | number of running child processes to parent process 1162541: 1
[2025-07-28 02:52:49] 2025-07-28 00:52:30,169 | INFO     | maximum number of monitored processes: 6
[2025-07-28 02:52:49] 2025-07-28 00:52:32,672 | INFO     | monitor loop #263: job 0:6745950149 is in state 'finished'
[2025-07-28 02:52:49] 2025-07-28 00:52:32,672 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 02:52:49] 2025-07-28 00:52:34,110 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 02:52:49] 2025-07-28 00:52:34,112 | INFO     | found 20 cores (10 cores per socket, 2 sockets) , CPU MHz: 2769.2536999999998
[2025-07-28 02:52:49] 2025-07-28 00:52:34,115 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745950149/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 02:52:49] 2025-07-28 00:52:34,115 | INFO     | extracted standard info from prmon json
[2025-07-28 02:52:49] 2025-07-28 00:52:34,115 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 02:52:49] 2025-07-28 00:52:34,115 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 02:52:49] 2025-07-28 00:52:34,115 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 02:52:49] 2025-07-28 00:52:34,116 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 02:52:49] 2025-07-28 00:52:34,116 | INFO     | fitting pss+swap vs Time
[2025-07-28 02:52:49] 2025-07-28 00:52:34,117 | INFO     | sum of square deviations: 36465800.0
[2025-07-28 02:52:49] 2025-07-28 00:52:34,117 | INFO     | sum of deviations: -5173834133.0
[2025-07-28 02:52:49] 2025-07-28 00:52:34,117 | INFO     | mean x: 1753662343.0
[2025-07-28 02:52:49] 2025-07-28 00:52:34,117 | INFO     | mean y: 2861533.2448979593
[2025-07-28 02:52:49] 2025-07-28 00:52:34,117 | INFO     | -- intersect: 248815669368.81012
[2025-07-28 02:52:49] 2025-07-28 00:52:34,117 | INFO     | intersect: 248815669368.81012
[2025-07-28 02:52:49] 2025-07-28 00:52:34,117 | INFO     | chi2: 0.08248956331422094
[2025-07-28 02:52:49] 2025-07-28 00:52:34,117 | INFO     | -- intersect: 248815669368.81012
[2025-07-28 02:52:49] 2025-07-28 00:52:34,117 | INFO     | current memory leak: -141.88 B/s (using 49 data points, chi2=0.08)
[2025-07-28 02:52:49] 2025-07-28 00:52:34,117 | INFO     | could have reported an average CPU frequency of 2512 MHz (5 samples)
[2025-07-28 02:52:49] 2025-07-28 00:52:34,117 | INFO     | ..............................
[2025-07-28 02:52:49] 2025-07-28 00:52:34,118 | INFO     | . Timing measurements:
[2025-07-28 02:52:49] 2025-07-28 00:52:34,118 | INFO     | . get job = 0 s
[2025-07-28 02:52:49] 2025-07-28 00:52:34,118 | INFO     | . initial setup = 1 s
[2025-07-28 02:52:49] 2025-07-28 00:52:34,118 | INFO     | . payload setup = 5 s
[2025-07-28 02:52:49] 2025-07-28 00:52:34,118 | INFO     | . stage-in = 0 s
[2025-07-28 02:52:49] 2025-07-28 00:52:34,118 | INFO     | . payload execution = 3370 s
[2025-07-28 02:52:49] 2025-07-28 00:52:34,118 | INFO     | . stage-out = 0 s
[2025-07-28 02:52:49] 2025-07-28 00:52:34,118 | INFO     | . log creation = 0 s
[2025-07-28 02:52:49] 2025-07-28 00:52:34,118 | INFO     | ..............................
[2025-07-28 02:52:49] 2025-07-28 00:52:34,167 | INFO     | 
[2025-07-28 02:52:49] 2025-07-28 00:52:34,167 | INFO     | job summary report
[2025-07-28 02:52:49] 2025-07-28 00:52:34,167 | INFO     | --------------------------------------------------
[2025-07-28 02:52:49] 2025-07-28 00:52:34,167 | INFO     | PanDA job id: 6745950149
[2025-07-28 02:52:49] 2025-07-28 00:52:34,167 | INFO     | task id: 45758441
[2025-07-28 02:52:49] 2025-07-28 00:52:34,167 | INFO     | errors: (none)
[2025-07-28 02:52:49] 2025-07-28 00:52:34,167 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | pilot state: finished 
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | transexitcode: 0
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | exeerrorcode: 0
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | exeerrordiag: 
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | exitcode: 0
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | exitmsg: OK
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | cpuconsumptiontime: 37228 s
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | nevents: 400
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | neventsw: 0
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | pid: 1162541
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | pgrp: 1162541
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | corecount: 12
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | event service: False
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | sizes: {0: 2397433, 1: 2397433, 3: 2397723, 11: 2397751, 3379: 2423411, 3380: 2423410, 3381: 2432592, 3383: 2432648, 3389: 2432902}
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | --------------------------------------------------
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | 
[2025-07-28 02:52:49] 2025-07-28 00:52:34,168 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 02:52:49] 2025-07-28 00:52:34,182 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,183 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 02:52:49] 2025-07-28 00:52:34,184 | INFO     | job 6745950149 has completed (purged errors)
[2025-07-28 02:52:49] 2025-07-28 00:52:34,184 | INFO     | overall cleanup function is called
[2025-07-28 02:52:49] 2025-07-28 00:52:35,190 | INFO     | --- collectZombieJob: --- 10, [1162541]
[2025-07-28 02:52:49] 2025-07-28 00:52:35,190 | INFO     | zombie collector waiting for pid 1162541
[2025-07-28 02:52:49] 2025-07-28 00:52:35,190 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 02:52:49] 2025-07-28 00:52:35,191 | INFO     | collected zombie processes
[2025-07-28 02:52:49] 2025-07-28 00:52:35,191 | INFO     | will attempt to kill all subprocesses of pid=1162541
[2025-07-28 02:52:49] 2025-07-28 00:52:35,271 | INFO     | process IDs to be killed: [1162541] (in reverse order)
[2025-07-28 02:52:49] 2025-07-28 00:52:35,301 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 02:52:49] 2025-07-28 00:52:35,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 02:52:49] 2025-07-28 00:52:35,303 | INFO     | did not find any defunct processes belonging to 1162541
[2025-07-28 02:52:49] 2025-07-28 00:52:35,305 | INFO     | did not find any defunct processes belonging to 1162541
[2025-07-28 02:52:49] 2025-07-28 00:52:35,305 | INFO     | ready for new job
[2025-07-28 02:52:49] 2025-07-28 00:52:35,305 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 02:52:49] 2025-07-28 00:52:35,306 | INFO     | ***************************************
[2025-07-28 02:52:49] 2025-07-28 00:52:35,307 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 02:52:49] 2025-07-28 00:52:35,307 | INFO     | ***************************************
[2025-07-28 02:52:49] 2025-07-28 00:52:35,307 | INFO     | 
[2025-07-28 02:52:49] 2025-07-28 00:52:35,307 | INFO     | architecture information:
[2025-07-28 02:52:49] 2025-07-28 00:52:35,308 | INFO     | executing command: cat /etc/os-release
[2025-07-28 02:52:49] 2025-07-28 00:52:35,316 | INFO     | cat /etc/os-release:
[2025-07-28 02:52:49] NAME="CentOS Linux"
[2025-07-28 02:52:49] VERSION="7 (Core)"
[2025-07-28 02:52:49] ID="centos"
[2025-07-28 02:52:49] ID_LIKE="rhel fedora"
[2025-07-28 02:52:49] VERSION_ID="7"
[2025-07-28 02:52:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 02:52:49] ANSI_COLOR="0;31"
[2025-07-28 02:52:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 02:52:49] HOME_URL="https://www.centos.org/"
[2025-07-28 02:52:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 02:52:49] 
[2025-07-28 02:52:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 02:52:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 02:52:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 02:52:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 02:52:49] 
[2025-07-28 02:52:49] 2025-07-28 00:52:35,317 | INFO     | ***************************************
[2025-07-28 02:52:49] 2025-07-28 00:52:35,820 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 02:52:49] 2025-07-28 00:52:35,831 | INFO     | sufficient remaining disk space (232761851904 B)
[2025-07-28 02:52:49] 2025-07-28 00:52:35,832 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 02:52:49] 2025-07-28 00:52:35,832 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 02:52:49] 2025-07-28 00:52:35,832 | INFO     | update_server=False
[2025-07-28 02:52:49] 2025-07-28 00:52:35,832 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 02:52:49] 2025-07-28 00:52:35,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:52:49] 2025-07-28 00:52:35,832 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 02:52:49] 2025-07-28 00:52:35,833 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 02:52:49] 2025-07-28 00:52:35,833 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 02:52:49] 2025-07-28 00:52:35,833 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 02:52:49] 2025-07-28 00:52:36,180 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:52:49] 2025-07-28 00:52:36,180 | INFO     | aborting loop
[2025-07-28 02:52:49] 2025-07-28 00:52:36,312 | INFO     | all data control threads have been joined
[2025-07-28 02:52:49] 2025-07-28 00:52:36,373 | INFO     | all job control threads have been joined
[2025-07-28 02:52:49] 2025-07-28 00:52:36,837 | INFO     | [job] retrieve thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:36,838 | INFO     | [job] queue monitor thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:37,044 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:37,084 | INFO     | [payload] failed_post thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:37,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 02:52:49] 2025-07-28 00:52:37,185 | INFO     | [job] job monitor thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:37,269 | INFO     | all payload control threads have been joined
[2025-07-28 02:52:49] 2025-07-28 00:52:37,317 | INFO     | [data] control thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:37,379 | INFO     | [job] control thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:37,549 | INFO     | [payload] validate_post thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:37,568 | INFO     | [job] validate thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:37,693 | INFO     | [data] copytool_in thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:37,695 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:37,703 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:37,762 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:38,275 | INFO     | [payload] control thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:39,154 | INFO     | [data] copytool_out thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:39,226 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 02:52:49] 2025-07-28 00:52:43,231 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 02:52:49] 2025-07-28 00:52:44,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140242647959360)>', '<ExcThread(monitor, started 140241679673088)>']
[2025-07-28 02:52:49] 2025-07-28 00:52:44,879 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 02:52:49] 2025-07-28 00:52:44,879 | INFO     | [monitor] control thread has ended
[2025-07-28 02:52:49] 2025-07-28 00:52:49,449 | INFO     | all workflow threads have been joined
[2025-07-28 02:52:49] 2025-07-28 00:52:49,449 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 02:52:49] 2025-07-28 00:52:49,449 | INFO     | traces error code: 0
[2025-07-28 02:52:49] 2025-07-28 00:52:49,449 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 02:52:49] 2025-07-28 00:52:49,523 [wrapper] ==== pilot stdout END ====
[2025-07-28 02:52:49] 2025-07-28 00:52:49,525 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 02:52:49] 2025-07-28 00:52:49,528 [wrapper] pilotpid: 1155289
[2025-07-28 02:52:49] 2025-07-28 00:52:49,530 [wrapper] Pilot exit status: 0
[2025-07-28 02:52:49] 2025-07-28 00:52:49,538 [wrapper] pandaids: 6745950149
[2025-07-28 02:52:49] 2025-07-28 00:52:49,556 [wrapper] cleanup supervisor_pilot 1174703 1155290
[2025-07-28 02:52:49] 2025-07-28 00:52:49,558 [wrapper] Test setup, not cleaning
[2025-07-28 02:52:49] 2025-07-28 00:52:49,561 [wrapper] apfmon messages muted
[2025-07-28 02:52:49] 2025-07-28 00:52:49,563 [wrapper] ==== wrapper stdout END ====
[2025-07-28 02:52:49] 2025-07-28 00:52:49,565 [wrapper] ==== wrapper stderr END ====
[2025-07-28 02:52:49]  *** Error codes and diagnostics ***
[2025-07-28 02:52:49]     "exeErrorCode": 0,
[2025-07-28 02:52:49]     "exeErrorDiag": "",
[2025-07-28 02:52:49]     "pilotErrorCode": 0,
[2025-07-28 02:52:49]     "pilotErrorDiag": "",
[2025-07-28 02:52:49]  *** Listing of results directory ***
[2025-07-28 02:52:49] total 400332
[2025-07-28 02:52:49] -rw-r--r-- 1 boinc boinc    530466 Jul 27 03:40 pilot3.tar.gz
[2025-07-28 02:52:49] -rw-r--r-- 1 boinc boinc      5112 Jul 27 03:59 queuedata.json
[2025-07-28 02:52:49] -rwx------ 1 boinc boinc     36292 Jul 27 04:00 runpilot2-wrapper.sh
[2025-07-28 02:52:49] -rw-r--r-- 1 boinc boinc       100 Jul 28 01:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 02:52:49] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 01:55 run_atlas
[2025-07-28 02:52:49] -rw-r--r-- 1 boinc boinc       105 Jul 28 01:55 job.xml
[2025-07-28 02:52:49] -rw-r--r-- 2 boinc boinc     15095 Jul 28 01:55 start_atlas.sh
[2025-07-28 02:52:49] drwxrwx--x 2 boinc boinc        68 Jul 28 01:55 shared
[2025-07-28 02:52:49] -rw-r--r-- 2 boinc boinc    542893 Jul 28 01:55 input.tar.gz
[2025-07-28 02:52:49] -rw-r--r-- 1 boinc boinc      6471 Jul 28 01:55 init_data.xml
[2025-07-28 02:52:49] -rw-r--r-- 2 boinc boinc 236237762 Jul 28 01:55 EVNT.45758439._000002.pool.root.1
[2025-07-28 02:52:49] -rw-r--r-- 1 boinc boinc         0 Jul 28 01:55 boinc_lockfile
[2025-07-28 02:52:49] -rw-r--r-- 1 boinc boinc      2576 Jul 28 01:55 pandaJob.out
[2025-07-28 02:52:49] -rw------- 1 boinc boinc    980125 Jul 28 01:55 agis_schedconf.cvmfs.json
[2025-07-28 02:52:49] -rw------- 1 boinc boinc   1593052 Jul 28 01:55 agis_ddmendpoints.agis.ALL.json
[2025-07-28 02:52:49] drwx------ 4 boinc boinc      4096 Jul 28 01:55 pilot3
[2025-07-28 02:52:49] -rw------- 1 boinc boinc 168416699 Jul 28 02:52 HITS.45758441._000046.pool.root.1
[2025-07-28 02:52:49] -rw-r--r-- 1 boinc boinc       529 Jul 28 02:52 boinc_task_state.xml
[2025-07-28 02:52:49] -rw------- 1 boinc boinc        95 Jul 28 02:52 pilot_heartbeat.json
[2025-07-28 02:52:49] -rw------- 1 boinc boinc      1023 Jul 28 02:52 memory_monitor_summary.json
[2025-07-28 02:52:49] -rw------- 1 boinc boinc    360870 Jul 28 02:52 log.45758441._000046.job.log.tgz.1
[2025-07-28 02:52:49] -rw------- 1 boinc boinc      7795 Jul 28 02:52 heartbeat.json
[2025-07-28 02:52:49] -rw-r--r-- 1 boinc boinc      8192 Jul 28 02:52 boinc_mmap_file
[2025-07-28 02:52:49] -rw-r--r-- 1 boinc boinc        27 Jul 28 02:52 wrapper_checkpoint.txt
[2025-07-28 02:52:49] -rw------- 1 boinc boinc      4481 Jul 28 02:52 pilotlog.txt
[2025-07-28 02:52:49] -rw------- 1 boinc boinc    344895 Jul 28 02:52 log.45758441._000046.job.log.1
[2025-07-28 02:52:49] -rw------- 1 boinc boinc       357 Jul 28 02:52 output.list
[2025-07-28 02:52:49] -rw-r--r-- 1 boinc boinc       620 Jul 28 02:52 runtime_log
[2025-07-28 02:52:49] -rw------- 1 boinc boinc    727040 Jul 28 02:52 result.tar.gz
[2025-07-28 02:52:49] -rw-r--r-- 1 boinc boinc      8684 Jul 28 02:52 runtime_log.err
[2025-07-28 02:52:49] -rw------- 1 boinc boinc       653 Jul 28 02:52 d1uLDmvr5z7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6l1KDmXe97jm.diag
[2025-07-28 02:52:49] -rw-r--r-- 1 boinc boinc     22573 Jul 28 02:52 stderr.txt
[2025-07-28 02:52:49] HITS file was successfully produced:
[2025-07-28 02:52:49] -rw------- 1 boinc boinc 168416699 Jul 28 02:52 shared/HITS.pool.root.1
[2025-07-28 02:52:49]  *** Contents of shared directory: ***
[2025-07-28 02:52:49] total 396436
[2025-07-28 02:52:49] -rw-r--r-- 2 boinc boinc     15095 Jul 28 01:55 start_atlas.sh
[2025-07-28 02:52:49] -rw-r--r-- 2 boinc boinc    542893 Jul 28 01:55 input.tar.gz
[2025-07-28 02:52:49] -rw-r--r-- 2 boinc boinc 236237762 Jul 28 01:55 ATLAS.root_0
[2025-07-28 02:52:49] -rw------- 1 boinc boinc 168416699 Jul 28 02:52 HITS.pool.root.1
[2025-07-28 02:52:49] -rw------- 1 boinc boinc    727040 Jul 28 02:52 result.tar.gz
02:52:50 (1151534): run_atlas exited; CPU time 37249.235355
02:52:50 (1151534): called boinc_finish(0)

</stderr_txt>
]]>


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