Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:17:28 (4162913): wrapper (7.7.26015): starting
00:17:28 (4162913): wrapper: running run_atlas (--nthreads 2)
[2025-07-28 00:17:28] Arguments: --nthreads 2
[2025-07-28 00:17:28] Threads: 2
[2025-07-28 00:17:28] Checking for CVMFS
[2025-07-28 00:17:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 00:17:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 00:17:28] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 00:17:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 00:17:28] 2.9.2.0 2527268 8604 61204 148827 1 56 35599978 36864000 0 130560 0 4292231 99.985 314960 2244 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 00:17:28] CVMFS is ok
[2025-07-28 00:17:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 00:17:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 00:17:28] Further information can be found at the LHC@home message board.
[2025-07-28 00:17:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 00:17:28] Checking for apptainer binary...
[2025-07-28 00:17:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 00:17:28] Running /usr/bin/apptainer --version
[2025-07-28 00:17:28] apptainer version 1.4.1-1.1
[2025-07-28 00:17:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 00:17:28] legendA269
[2025-07-28 00:17:28] apptainer works
[2025-07-28 00:17:28] Set ATHENA_PROC_NUMBER=2
[2025-07-28 00:17:28] Set ATHENA_CORE_NUMBER=2
[2025-07-28 00:17:28] Starting ATLAS job with PandaID=6746034194
[2025-07-28 00:17:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 02:47:53]  *** The last 200 lines of the pilot log: ***
[2025-07-28 02:47:53] 2025-07-28 00:47:31,985 | INFO     | monitor loop #694: job 0:6746034194 is in state 'finished'
[2025-07-28 02:47:53] 2025-07-28 00:47:31,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 02:47:53] 2025-07-28 00:47:33,291 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 02:47:53] 2025-07-28 00:47:33,291 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4521.6815
[2025-07-28 02:47:53] 2025-07-28 00:47:33,292 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6746034194/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 02:47:53] 2025-07-28 00:47:33,292 | INFO     | extracted standard info from prmon json
[2025-07-28 02:47:53] 2025-07-28 00:47:33,292 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 02:47:53] 2025-07-28 00:47:33,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 02:47:53] 2025-07-28 00:47:33,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 02:47:53] 2025-07-28 00:47:33,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 02:47:53] 2025-07-28 00:47:33,294 | INFO     | fitting pss+swap vs Time
[2025-07-28 02:47:53] 2025-07-28 00:47:33,294 | INFO     | sum of square deviations: 984941258.0
[2025-07-28 02:47:53] 2025-07-28 00:47:33,294 | INFO     | sum of deviations: -19416677895.0
[2025-07-28 02:47:53] 2025-07-28 00:47:33,294 | INFO     | mean x: 1753659144.0
[2025-07-28 02:47:53] 2025-07-28 00:47:33,294 | INFO     | mean y: 2383002.523809524
[2025-07-28 02:47:53] 2025-07-28 00:47:33,294 | INFO     | -- intersect: 34573210917.49113
[2025-07-28 02:47:53] 2025-07-28 00:47:33,294 | INFO     | intersect: 34573210917.49113
[2025-07-28 02:47:53] 2025-07-28 00:47:33,294 | INFO     | chi2: 1.6259466875599347
[2025-07-28 02:47:53] 2025-07-28 00:47:33,294 | INFO     | sum of square deviations: 887813855.5
[2025-07-28 02:47:53] 2025-07-28 00:47:33,294 | INFO     | sum of deviations: -17706385484.500004
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | mean x: 1753658991.5
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | mean y: 2385688.9507042253
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | -- intersect: 34977016823.053925
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | intersect: 34977016823.053925
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | chi2: 1.6250353831620172
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | current chi2=1.6250353831620172 (change=0.05604761858982114 %)
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | right removable region: 141
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | sum of square deviations: 887813855.5
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | sum of deviations: -38095959882.5
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | mean x: 1753659296.5
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | mean y: 2411729.73943662
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | -- intersect: 75251670111.06145
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | intersect: 75251670111.06145
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | chi2: 0.12681812606405043
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | current chi2=0.12681812606405043 (change=92.20035152232654 %)
[2025-07-28 02:47:53] 2025-07-28 00:47:33,295 | INFO     | sum of square deviations: 797291228.0
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | sum of deviations: -34798280880.99999
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | mean x: 1753659449.0
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | mean y: 2406170.8467153283
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | -- intersect: 76541984097.724
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | intersect: 76541984097.724
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | chi2: 0.1260655204928021
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | current chi2=0.1260655204928021 (change=0.5934526826774231 %)
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | left removable region: 20
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | sum of square deviations: 549294020.0
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | sum of deviations: -25575032142.000004
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | mean x: 1753659571.0
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | mean y: 2396792.6694214875
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | -- intersect: 81652475368.8952
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | intersect: 81652475368.8952
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | chi2: 0.11891898933787211
[2025-07-28 02:47:53] 2025-07-28 00:47:33,296 | INFO     | -- intersect: 81652475368.8952
[2025-07-28 02:47:53] 2025-07-28 00:47:33,297 | INFO     | current memory leak: -46.56 B/s (using 121 data points, chi2=0.12)
[2025-07-28 02:47:53] 2025-07-28 00:47:33,297 | INFO     | could have reported an average CPU frequency of 4522 MHz (8 samples)
[2025-07-28 02:47:53] 2025-07-28 00:47:33,297 | INFO     | ..............................
[2025-07-28 02:47:53] 2025-07-28 00:47:33,297 | INFO     | . Timing measurements:
[2025-07-28 02:47:53] 2025-07-28 00:47:33,297 | INFO     | . get job = 0 s
[2025-07-28 02:47:53] 2025-07-28 00:47:33,297 | INFO     | . initial setup = 1 s
[2025-07-28 02:47:53] 2025-07-28 00:47:33,297 | INFO     | . payload setup = 8 s
[2025-07-28 02:47:53] 2025-07-28 00:47:33,297 | INFO     | . stage-in = 0 s
[2025-07-28 02:47:53] 2025-07-28 00:47:33,297 | INFO     | . payload execution = 8949 s
[2025-07-28 02:47:53] 2025-07-28 00:47:33,297 | INFO     | . stage-out = 0 s
[2025-07-28 02:47:53] 2025-07-28 00:47:33,297 | INFO     | . log creation = 0 s
[2025-07-28 02:47:53] 2025-07-28 00:47:33,297 | INFO     | ..............................
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | 
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | job summary report
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | --------------------------------------------------
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | PanDA job id: 6746034194
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | task id: 45758780
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | errors: (none)
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | pilot state: finished 
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | transexitcode: 0
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | exeerrorcode: 0
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | exeerrordiag: 
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | exitcode: 0
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | exitmsg: OK
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | cpuconsumptiontime: 17508 s
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | nevents: 400
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | neventsw: 0
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | pid: 4173006
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | pgrp: 4173006
[2025-07-28 02:47:53] 2025-07-28 00:47:33,432 | INFO     | corecount: 2
[2025-07-28 02:47:53] 2025-07-28 00:47:33,433 | INFO     | event service: False
[2025-07-28 02:47:53] 2025-07-28 00:47:33,433 | INFO     | sizes: {0: 2397305, 1: 2397504, 7: 2397766, 11: 2397794, 8961: 2426166, 8963: 2435354, 8973: 2435492}
[2025-07-28 02:47:53] 2025-07-28 00:47:33,433 | INFO     | --------------------------------------------------
[2025-07-28 02:47:53] 2025-07-28 00:47:33,433 | INFO     | 
[2025-07-28 02:47:53] 2025-07-28 00:47:33,433 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 02:47:53] 2025-07-28 00:47:33,450 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,451 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,451 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,451 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,452 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,452 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,452 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 02:47:53] 2025-07-28 00:47:33,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,453 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 02:47:53] 2025-07-28 00:47:33,453 | INFO     | job 6746034194 has completed (purged errors)
[2025-07-28 02:47:53] 2025-07-28 00:47:33,453 | INFO     | overall cleanup function is called
[2025-07-28 02:47:53] 2025-07-28 00:47:34,133 | INFO     | PID=4166540 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 02:47:53] 2025-07-28 00:47:34,460 | INFO     | --- collectZombieJob: --- 10, [4173006]
[2025-07-28 02:47:53] 2025-07-28 00:47:34,460 | INFO     | zombie collector waiting for pid 4173006
[2025-07-28 02:47:53] 2025-07-28 00:47:34,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 02:47:53] 2025-07-28 00:47:34,461 | INFO     | collected zombie processes
[2025-07-28 02:47:53] 2025-07-28 00:47:34,461 | INFO     | will attempt to kill all subprocesses of pid=4173006
[2025-07-28 02:47:53] 2025-07-28 00:47:34,492 | INFO     | process IDs to be killed: [4173006] (in reverse order)
[2025-07-28 02:47:53] 2025-07-28 00:47:34,512 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 02:47:53] 2025-07-28 00:47:34,512 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 02:47:53] 2025-07-28 00:47:34,512 | INFO     | did not find any defunct processes belonging to 4173006
[2025-07-28 02:47:53] 2025-07-28 00:47:34,513 | INFO     | did not find any defunct processes belonging to 4173006
[2025-07-28 02:47:53] 2025-07-28 00:47:34,513 | INFO     | ready for new job
[2025-07-28 02:47:53] 2025-07-28 00:47:34,513 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 02:47:53] 2025-07-28 00:47:34,514 | INFO     | ***************************************
[2025-07-28 02:47:53] 2025-07-28 00:47:34,514 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 02:47:53] 2025-07-28 00:47:34,514 | INFO     | ***************************************
[2025-07-28 02:47:53] 2025-07-28 00:47:34,514 | INFO     | 
[2025-07-28 02:47:53] 2025-07-28 00:47:34,514 | INFO     | architecture information:
[2025-07-28 02:47:53] 2025-07-28 00:47:34,514 | INFO     | executing command: cat /etc/os-release
[2025-07-28 02:47:53] 2025-07-28 00:47:34,522 | INFO     | cat /etc/os-release:
[2025-07-28 02:47:53] NAME="CentOS Linux"
[2025-07-28 02:47:53] VERSION="7 (Core)"
[2025-07-28 02:47:53] ID="centos"
[2025-07-28 02:47:53] ID_LIKE="rhel fedora"
[2025-07-28 02:47:53] VERSION_ID="7"
[2025-07-28 02:47:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 02:47:53] ANSI_COLOR="0;31"
[2025-07-28 02:47:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 02:47:53] HOME_URL="https://www.centos.org/"
[2025-07-28 02:47:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 02:47:53] 
[2025-07-28 02:47:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 02:47:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 02:47:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 02:47:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 02:47:53] 
[2025-07-28 02:47:53] 2025-07-28 00:47:34,522 | INFO     | ***************************************
[2025-07-28 02:47:53] 2025-07-28 00:47:35,026 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 02:47:53] 2025-07-28 00:47:35,037 | INFO     | sufficient remaining disk space (320413368320 B)
[2025-07-28 02:47:53] 2025-07-28 00:47:35,038 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 02:47:53] 2025-07-28 00:47:35,038 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 02:47:53] 2025-07-28 00:47:35,038 | INFO     | update_server=False
[2025-07-28 02:47:53] 2025-07-28 00:47:35,038 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 02:47:53] 2025-07-28 00:47:35,038 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:47:53] 2025-07-28 00:47:35,038 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 02:47:53] 2025-07-28 00:47:35,038 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 02:47:53] 2025-07-28 00:47:35,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 02:47:53] 2025-07-28 00:47:35,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 02:47:53] 2025-07-28 00:47:35,495 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:47:53] 2025-07-28 00:47:35,495 | INFO     | aborting loop
[2025-07-28 02:47:53] 2025-07-28 00:47:35,763 | INFO     | all data control threads have been joined
[2025-07-28 02:47:53] 2025-07-28 00:47:36,044 | INFO     | [job] queue monitor thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:36,044 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:36,045 | INFO     | [job] retrieve thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:36,054 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 02:47:53] 2025-07-28 00:47:36,101 | INFO     | [job] validate thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:36,167 | INFO     | all job control threads have been joined
[2025-07-28 02:47:53] 2025-07-28 00:47:36,317 | INFO     | [payload] failed_post thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:36,368 | INFO     | all payload control threads have been joined
[2025-07-28 02:47:53] 2025-07-28 00:47:36,393 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:36,501 | INFO     | [job] job monitor thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:36,769 | INFO     | [data] control thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:36,822 | INFO     | [payload] validate_post thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:36,968 | INFO     | [data] copytool_in thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:37,059 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:37,173 | INFO     | [job] control thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:37,374 | INFO     | [payload] control thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:38,060 | INFO     | [data] copytool_out thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:38,115 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 02:47:53] 2025-07-28 00:47:41,049 [wrapper] supervise_pilot (15 min periods counter: 11)
[2025-07-28 02:47:53] 2025-07-28 00:47:42,121 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:45,587 | INFO     | job.realtimelogging is not enabled
[2025-07-28 02:47:53] 2025-07-28 00:47:46,591 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 02:47:53] 2025-07-28 00:47:48,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075733538624)>', '<ExcThread(monitor, started 140075098687232)>']
[2025-07-28 02:47:53] 2025-07-28 00:47:49,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 02:47:53] 2025-07-28 00:47:49,114 | INFO     | [monitor] control thread has ended
[2025-07-28 02:47:53] 2025-07-28 00:47:53,679 | INFO     | all workflow threads have been joined
[2025-07-28 02:47:53] 2025-07-28 00:47:53,679 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 02:47:53] 2025-07-28 00:47:53,680 | INFO     | traces error code: 0
[2025-07-28 02:47:53] 2025-07-28 00:47:53,680 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 02:47:53] 2025-07-28 00:47:53,721 [wrapper] ==== pilot stdout END ====
[2025-07-28 02:47:53] 2025-07-28 00:47:53,723 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 02:47:53] 2025-07-28 00:47:53,725 [wrapper] pilotpid: 4166540
[2025-07-28 02:47:53] 2025-07-28 00:47:53,728 [wrapper] Pilot exit status: 0
[2025-07-28 02:47:53] 2025-07-28 00:47:53,733 [wrapper] pandaids: 6746034194
[2025-07-28 02:47:53] 2025-07-28 00:47:53,746 [wrapper] cleanup supervisor_pilot 4192710 4166541
[2025-07-28 02:47:53] 2025-07-28 00:47:53,748 [wrapper] Test setup, not cleaning
[2025-07-28 02:47:53] 2025-07-28 00:47:53,750 [wrapper] apfmon messages muted
[2025-07-28 02:47:53] 2025-07-28 00:47:53,752 [wrapper] ==== wrapper stdout END ====
[2025-07-28 02:47:53] 2025-07-28 00:47:53,754 [wrapper] ==== wrapper stderr END ====
[2025-07-28 02:47:53]  *** Error codes and diagnostics ***
[2025-07-28 02:47:53]     "exeErrorCode": 0,
[2025-07-28 02:47:53]     "exeErrorDiag": "",
[2025-07-28 02:47:53]     "pilotErrorCode": 0,
[2025-07-28 02:47:53]     "pilotErrorDiag": "",
[2025-07-28 02:47:53]  *** Listing of results directory ***
[2025-07-28 02:47:53] total 412624
[2025-07-28 02:47:53] -rw-r--r-- 1 boinc boinc    530466 Jul 27 06:45 pilot3.tar.gz
[2025-07-28 02:47:53] -rw-r--r-- 1 boinc boinc      5112 Jul 27 06:50 queuedata.json
[2025-07-28 02:47:53] -rwx------ 1 boinc boinc     36292 Jul 27 06:52 runpilot2-wrapper.sh
[2025-07-28 02:47:53] -rw-r--r-- 1 boinc boinc       100 Jul 28 00:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 02:47:53] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 00:17 run_atlas
[2025-07-28 02:47:53] -rw-r--r-- 1 boinc boinc       105 Jul 28 00:17 job.xml
[2025-07-28 02:47:53] -rw-r--r-- 2 boinc boinc 240196369 Jul 28 00:17 EVNT.45758778._000003.pool.root.1
[2025-07-28 02:47:53] -rw-r--r-- 2 boinc boinc    542896 Jul 28 00:17 input.tar.gz
[2025-07-28 02:47:53] -rw-r--r-- 2 boinc boinc     15095 Jul 28 00:17 start_atlas.sh
[2025-07-28 02:47:53] drwxrwx--x 2 boinc boinc      4096 Jul 28 00:17 shared
[2025-07-28 02:47:53] -rw-r--r-- 1 boinc boinc         0 Jul 28 00:17 boinc_setup_complete
[2025-07-28 02:47:53] -rw-r--r-- 1 boinc boinc      6287 Jul 28 00:17 init_data.xml
[2025-07-28 02:47:53] -rw-r--r-- 1 boinc boinc         0 Jul 28 00:17 boinc_lockfile
[2025-07-28 02:47:53] -rw-r--r-- 1 boinc boinc      2566 Jul 28 00:17 pandaJob.out
[2025-07-28 02:47:53] -rw------- 1 boinc boinc    980109 Jul 28 00:17 agis_schedconf.cvmfs.json
[2025-07-28 02:47:53] -rw------- 1 boinc boinc   1593052 Jul 28 00:17 agis_ddmendpoints.agis.ALL.json
[2025-07-28 02:47:53] drwx------ 4 boinc boinc      4096 Jul 28 00:17 pilot3
[2025-07-28 02:47:53] -rw------- 1 boinc boinc 176291075 Jul 28 02:47 HITS.45758780._000054.pool.root.1
[2025-07-28 02:47:53] -rw-r--r-- 1 boinc boinc       529 Jul 28 02:47 boinc_task_state.xml
[2025-07-28 02:47:53] -rw------- 1 boinc boinc      1015 Jul 28 02:47 memory_monitor_summary.json
[2025-07-28 02:47:53] -rw------- 1 boinc boinc        95 Jul 28 02:47 pilot_heartbeat.json
[2025-07-28 02:47:53] -rw------- 1 boinc boinc    241858 Jul 28 02:47 log.45758780._000054.job.log.tgz.1
[2025-07-28 02:47:53] -rw------- 1 boinc boinc      7765 Jul 28 02:47 heartbeat.json
[2025-07-28 02:47:53] -rw-r--r-- 1 boinc boinc      8192 Jul 28 02:47 boinc_mmap_file
[2025-07-28 02:47:53] -rw-r--r-- 1 boinc boinc        27 Jul 28 02:47 wrapper_checkpoint.txt
[2025-07-28 02:47:53] -rw------- 1 boinc boinc      4556 Jul 28 02:47 pilotlog.txt
[2025-07-28 02:47:53] -rw------- 1 boinc boinc    839479 Jul 28 02:47 log.45758780._000054.job.log.1
[2025-07-28 02:47:53] -rw------- 1 boinc boinc       357 Jul 28 02:47 output.list
[2025-07-28 02:47:53] -rw-r--r-- 1 boinc boinc       620 Jul 28 02:47 runtime_log
[2025-07-28 02:47:53] -rw------- 1 boinc boinc   1095680 Jul 28 02:47 result.tar.gz
[2025-07-28 02:47:53] -rw------- 1 boinc boinc       663 Jul 28 02:47 yMVKDm3X8z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDHULDmu1cHnn.diag
[2025-07-28 02:47:53] -rw-r--r-- 1 boinc boinc      8754 Jul 28 02:47 runtime_log.err
[2025-07-28 02:47:53] -rw-r--r-- 1 boinc boinc     21108 Jul 28 02:47 stderr.txt
[2025-07-28 02:47:53] HITS file was successfully produced:
[2025-07-28 02:47:53] -rw------- 1 boinc boinc 176291075 Jul 28 02:47 shared/HITS.pool.root.1
[2025-07-28 02:47:53]  *** Contents of shared directory: ***
[2025-07-28 02:47:53] total 408356
[2025-07-28 02:47:53] -rw-r--r-- 2 boinc boinc 240196369 Jul 28 00:17 ATLAS.root_0
[2025-07-28 02:47:53] -rw-r--r-- 2 boinc boinc    542896 Jul 28 00:17 input.tar.gz
[2025-07-28 02:47:53] -rw-r--r-- 2 boinc boinc     15095 Jul 28 00:17 start_atlas.sh
[2025-07-28 02:47:53] -rw------- 1 boinc boinc 176291075 Jul 28 02:47 HITS.pool.root.1
[2025-07-28 02:47:53] -rw------- 1 boinc boinc   1095680 Jul 28 02:47 result.tar.gz
02:47:55 (4162913): run_atlas exited; CPU time 17543.623848
02:47:55 (4162913): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN