Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:00:01 (23042): wrapper (7.7.26015): starting
06:00:01 (23042): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 06:00:02] Arguments: --nthreads 12
[2025-07-27 06:00:02] Threads: 12
[2025-07-27 06:00:02] Checking for CVMFS
[2025-07-27 06:00:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 06:00:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 06:00:02] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 06:00:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 06:00:02] 2.11.2.0 2918 111854 95320 148807 2 57 14624981 20275201 1 130560 0 38826736 99.972 9638259 10587 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 06:00:02] CVMFS is ok
[2025-07-27 06:00:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 06:00:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 06:00:02] Further information can be found at the LHC@home message board.
[2025-07-27 06:00:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 06:00:02] Checking for apptainer binary...
[2025-07-27 06:00:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 06:00:02] Running /usr/bin/apptainer --version
[2025-07-27 06:00:02] apptainer version 1.3.2-1.el7
[2025-07-27 06:00:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 06:00:03] c-205-12.aglt2.org
[2025-07-27 06:00:03] apptainer works
[2025-07-27 06:00:03] Set ATHENA_PROC_NUMBER=12
[2025-07-27 06:00:03] Set ATHENA_CORE_NUMBER=12
[2025-07-27 06:00:03] Starting ATLAS job with PandaID=6746013540
[2025-07-27 06:00:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 08:15:38]  *** The last 200 lines of the pilot log: ***
[2025-07-27 08:15:39] 2025-07-27 12:15:06,829 | INFO     | chi2: 0.08161469942066407
[2025-07-27 08:15:39] 2025-07-27 12:15:06,830 | INFO     | current chi2=0.08161469942066407 (change=94.04084053381887 %)
[2025-07-27 08:15:39] 2025-07-27 12:15:06,830 | INFO     | sum of square deviations: 563026370.5
[2025-07-27 08:15:39] 2025-07-27 12:15:06,830 | INFO     | sum of deviations: 2341528401.499999
[2025-07-27 08:15:39] 2025-07-27 12:15:06,831 | INFO     | mean x: 1753614748.5
[2025-07-27 08:15:39] 2025-07-27 12:15:06,831 | INFO     | mean y: 2648745.2377049183
[2025-07-27 08:15:39] 2025-07-27 12:15:06,831 | INFO     | -- intersect: -7290328909.17578
[2025-07-27 08:15:39] 2025-07-27 12:15:06,831 | INFO     | intersect: -7290328909.17578
[2025-07-27 08:15:39] 2025-07-27 12:15:06,831 | INFO     | chi2: 0.0013620471778000962
[2025-07-27 08:15:39] 2025-07-27 12:15:06,831 | INFO     | current chi2=0.0013620471778000962 (change=98.33112516805367 %)
[2025-07-27 08:15:39] 2025-07-27 12:15:06,831 | INFO     | sum of square deviations: 496597218.0
[2025-07-27 08:15:39] 2025-07-27 12:15:06,832 | INFO     | sum of deviations: 1940871342.9999998
[2025-07-27 08:15:39] 2025-07-27 12:15:06,832 | INFO     | mean x: 1753614901.0
[2025-07-27 08:15:39] 2025-07-27 12:15:06,832 | INFO     | mean y: 2649677.8974358975
[2025-07-27 08:15:39] 2025-07-27 12:15:06,832 | INFO     | -- intersect: -6851075604.165424
[2025-07-27 08:15:39] 2025-07-27 12:15:06,832 | INFO     | intersect: -6851075604.165424
[2025-07-27 08:15:39] 2025-07-27 12:15:06,833 | INFO     | chi2: 0.0009643049711478413
[2025-07-27 08:15:39] 2025-07-27 12:15:06,833 | INFO     | current chi2=0.0009643049711478413 (change=29.20179367756308 %)
[2025-07-27 08:15:39] 2025-07-27 12:15:06,833 | INFO     | sum of square deviations: 435610028.0
[2025-07-27 08:15:39] 2025-07-27 12:15:06,834 | INFO     | sum of deviations: 1192023478.5
[2025-07-27 08:15:39] 2025-07-27 12:15:06,834 | INFO     | mean x: 1753615053.5
[2025-07-27 08:15:39] 2025-07-27 12:15:06,834 | INFO     | mean y: 2651544.4375
[2025-07-27 08:15:39] 2025-07-27 12:15:06,834 | INFO     | -- intersect: -4796021997.630346
[2025-07-27 08:15:39] 2025-07-27 12:15:06,834 | INFO     | intersect: -4796021997.630346
[2025-07-27 08:15:39] 2025-07-27 12:15:06,834 | INFO     | chi2: 0.00024160266152270556
[2025-07-27 08:15:39] 2025-07-27 12:15:06,834 | INFO     | current chi2=0.00024160266152270556 (change=74.94540951758046 %)
[2025-07-27 08:15:39] 2025-07-27 12:15:06,835 | INFO     | sum of square deviations: 379832238.0
[2025-07-27 08:15:39] 2025-07-27 12:15:06,835 | INFO     | sum of deviations: 893890950.0000001
[2025-07-27 08:15:39] 2025-07-27 12:15:06,835 | INFO     | mean x: 1753615206.0
[2025-07-27 08:15:39] 2025-07-27 12:15:06,835 | INFO     | mean y: 2652353.6822429905
[2025-07-27 08:15:39] 2025-07-27 12:15:06,835 | INFO     | -- intersect: -4124276868.2280517
[2025-07-27 08:15:39] 2025-07-27 12:15:06,835 | INFO     | intersect: -4124276868.2280517
[2025-07-27 08:15:39] 2025-07-27 12:15:06,836 | INFO     | chi2: 0.00014617867115323152
[2025-07-27 08:15:39] 2025-07-27 12:15:06,836 | INFO     | current chi2=0.00014617867115323152 (change=39.496249655555296 %)
[2025-07-27 08:15:39] 2025-07-27 12:15:06,836 | INFO     | sum of square deviations: 329031285.5
[2025-07-27 08:15:39] 2025-07-27 12:15:06,836 | INFO     | sum of deviations: 681516857.4999999
[2025-07-27 08:15:39] 2025-07-27 12:15:06,837 | INFO     | mean x: 1753615358.5
[2025-07-27 08:15:39] 2025-07-27 12:15:06,837 | INFO     | mean y: 2652991.2843137253
[2025-07-27 08:15:39] 2025-07-27 12:15:06,837 | INFO     | -- intersect: -3629580419.506819
[2025-07-27 08:15:39] 2025-07-27 12:15:06,837 | INFO     | intersect: -3629580419.506819
[2025-07-27 08:15:39] 2025-07-27 12:15:06,837 | INFO     | chi2: 0.0001181290141275721
[2025-07-27 08:15:39] 2025-07-27 12:15:06,837 | INFO     | current chi2=0.0001181290141275721 (change=19.188611309960823 %)
[2025-07-27 08:15:39] 2025-07-27 12:15:06,837 | INFO     | left removable region: 60
[2025-07-27 08:15:39] 2025-07-27 12:15:06,838 | INFO     | sum of square deviations: 89127252.5
[2025-07-27 08:15:39] 2025-07-27 12:15:06,838 | INFO     | sum of deviations: 177957221.5
[2025-07-27 08:15:39] 2025-07-27 12:15:06,838 | INFO     | mean x: 1753616090.5
[2025-07-27 08:15:39] 2025-07-27 12:15:06,838 | INFO     | mean y: 2654173.6818181816
[2025-07-27 08:15:39] 2025-07-27 12:15:06,838 | INFO     | -- intersect: -3498728829.7163014
[2025-07-27 08:15:39] 2025-07-27 12:15:06,838 | INFO     | intersect: -3498728829.7163014
[2025-07-27 08:15:39] 2025-07-27 12:15:06,839 | INFO     | chi2: 2.6636246918258162e-05
[2025-07-27 08:15:39] 2025-07-27 12:15:06,839 | INFO     | -- intersect: -3498728829.7163014
[2025-07-27 08:15:39] 2025-07-27 12:15:06,839 | INFO     | current memory leak: 2.00 B/s (using 66 data points, chi2=0.00)
[2025-07-27 08:15:39] 2025-07-27 12:15:06,839 | INFO     | could have reported an average CPU frequency of 2196 MHz (8 samples)
[2025-07-27 08:15:39] 2025-07-27 12:15:06,839 | INFO     | ..............................
[2025-07-27 08:15:39] 2025-07-27 12:15:06,839 | INFO     | . Timing measurements:
[2025-07-27 08:15:39] 2025-07-27 12:15:06,839 | INFO     | . get job = 0 s
[2025-07-27 08:15:39] 2025-07-27 12:15:06,840 | INFO     | . initial setup = 2 s
[2025-07-27 08:15:39] 2025-07-27 12:15:06,840 | INFO     | . payload setup = 9 s
[2025-07-27 08:15:39] 2025-07-27 12:15:06,840 | INFO     | . stage-in = 0 s
[2025-07-27 08:15:39] 2025-07-27 12:15:06,840 | INFO     | . payload execution = 8053 s
[2025-07-27 08:15:39] 2025-07-27 12:15:06,840 | INFO     | . stage-out = 0 s
[2025-07-27 08:15:39] 2025-07-27 12:15:06,840 | INFO     | . log creation = 0 s
[2025-07-27 08:15:39] 2025-07-27 12:15:06,840 | INFO     | ..............................
[2025-07-27 08:15:39] 2025-07-27 12:15:06,924 | INFO     | 
[2025-07-27 08:15:39] 2025-07-27 12:15:06,924 | INFO     | job summary report
[2025-07-27 08:15:39] 2025-07-27 12:15:06,924 | INFO     | --------------------------------------------------
[2025-07-27 08:15:39] 2025-07-27 12:15:06,924 | INFO     | PanDA job id: 6746013540
[2025-07-27 08:15:39] 2025-07-27 12:15:06,925 | INFO     | task id: 45759981
[2025-07-27 08:15:39] 2025-07-27 12:15:06,925 | INFO     | errors: (none)
[2025-07-27 08:15:39] 2025-07-27 12:15:06,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 08:15:39] 2025-07-27 12:15:06,925 | INFO     | pilot state: finished 
[2025-07-27 08:15:39] 2025-07-27 12:15:06,925 | INFO     | transexitcode: 0
[2025-07-27 08:15:39] 2025-07-27 12:15:06,925 | INFO     | exeerrorcode: 0
[2025-07-27 08:15:39] 2025-07-27 12:15:06,926 | INFO     | exeerrordiag: 
[2025-07-27 08:15:39] 2025-07-27 12:15:06,926 | INFO     | exitcode: 0
[2025-07-27 08:15:39] 2025-07-27 12:15:06,926 | INFO     | exitmsg: OK
[2025-07-27 08:15:39] 2025-07-27 12:15:06,926 | INFO     | cpuconsumptiontime: 89154 s
[2025-07-27 08:15:39] 2025-07-27 12:15:06,926 | INFO     | nevents: 400
[2025-07-27 08:15:39] 2025-07-27 12:15:06,926 | INFO     | neventsw: 0
[2025-07-27 08:15:39] 2025-07-27 12:15:06,926 | INFO     | pid: 609
[2025-07-27 08:15:39] 2025-07-27 12:15:06,927 | INFO     | pgrp: 609
[2025-07-27 08:15:39] 2025-07-27 12:15:06,927 | INFO     | corecount: 12
[2025-07-27 08:15:39] 2025-07-27 12:15:06,927 | INFO     | event service: False
[2025-07-27 08:15:39] 2025-07-27 12:15:06,927 | INFO     | sizes: {0: 2397289, 1: 2397488, 5: 2397750, 11: 2397806, 8067: 2425563, 8068: 2434745, 8074: 2434883}
[2025-07-27 08:15:39] 2025-07-27 12:15:06,927 | INFO     | --------------------------------------------------
[2025-07-27 08:15:39] 2025-07-27 12:15:06,927 | INFO     | 
[2025-07-27 08:15:39] 2025-07-27 12:15:06,928 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 08:15:39] 2025-07-27 12:15:06,952 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,952 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,952 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,952 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,952 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,955 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 08:15:39] 2025-07-27 12:15:06,955 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,955 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 08:15:39] 2025-07-27 12:15:06,955 | INFO     | job 6746013540 has completed (purged errors)
[2025-07-27 08:15:39] 2025-07-27 12:15:06,956 | INFO     | overall cleanup function is called
[2025-07-27 08:15:39] 2025-07-27 12:15:07,962 | INFO     | --- collectZombieJob: --- 10, [609]
[2025-07-27 08:15:39] 2025-07-27 12:15:07,963 | INFO     | zombie collector waiting for pid 609
[2025-07-27 08:15:39] 2025-07-27 12:15:07,963 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 08:15:39] 2025-07-27 12:15:07,963 | INFO     | collected zombie processes
[2025-07-27 08:15:39] 2025-07-27 12:15:07,963 | INFO     | will attempt to kill all subprocesses of pid=609
[2025-07-27 08:15:39] 2025-07-27 12:15:08,056 | INFO     | process IDs to be killed: [609] (in reverse order)
[2025-07-27 08:15:39] 2025-07-27 12:15:08,107 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 08:15:39] 2025-07-27 12:15:08,108 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 08:15:39] 2025-07-27 12:15:08,112 | INFO     | did not find any defunct processes belonging to 609
[2025-07-27 08:15:39] 2025-07-27 12:15:08,115 | INFO     | did not find any defunct processes belonging to 609
[2025-07-27 08:15:39] 2025-07-27 12:15:08,116 | INFO     | ready for new job
[2025-07-27 08:15:39] 2025-07-27 12:15:08,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 08:15:39] 2025-07-27 12:15:08,117 | INFO     | ***************************************
[2025-07-27 08:15:39] 2025-07-27 12:15:08,117 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 08:15:39] 2025-07-27 12:15:08,117 | INFO     | ***************************************
[2025-07-27 08:15:39] 2025-07-27 12:15:08,117 | INFO     | 
[2025-07-27 08:15:39] 2025-07-27 12:15:08,118 | INFO     | architecture information:
[2025-07-27 08:15:39] 2025-07-27 12:15:08,119 | INFO     | executing command: cat /etc/os-release
[2025-07-27 08:15:39] 2025-07-27 12:15:08,133 | INFO     | cat /etc/os-release:
[2025-07-27 08:15:39] NAME="CentOS Linux"
[2025-07-27 08:15:39] VERSION="7 (Core)"
[2025-07-27 08:15:39] ID="centos"
[2025-07-27 08:15:39] ID_LIKE="rhel fedora"
[2025-07-27 08:15:39] VERSION_ID="7"
[2025-07-27 08:15:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 08:15:39] ANSI_COLOR="0;31"
[2025-07-27 08:15:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 08:15:39] HOME_URL="https://www.centos.org/"
[2025-07-27 08:15:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 08:15:39] 
[2025-07-27 08:15:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 08:15:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 08:15:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 08:15:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 08:15:39] 
[2025-07-27 08:15:39] 2025-07-27 12:15:08,133 | INFO     | ***************************************
[2025-07-27 08:15:39] 2025-07-27 12:15:08,636 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 08:15:39] 2025-07-27 12:15:08,653 | INFO     | sufficient remaining disk space (29458694144 B)
[2025-07-27 08:15:39] 2025-07-27 12:15:08,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 08:15:39] 2025-07-27 12:15:08,654 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 08:15:39] 2025-07-27 12:15:08,654 | INFO     | update_server=False
[2025-07-27 08:15:39] 2025-07-27 12:15:08,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 08:15:39] 2025-07-27 12:15:08,654 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:15:39] 2025-07-27 12:15:08,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 08:15:39] 2025-07-27 12:15:08,811 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 08:15:39] 2025-07-27 12:15:08,811 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 08:15:39] 2025-07-27 12:15:08,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:15:39] 2025-07-27 12:15:08,811 | INFO     | will abort loop
[2025-07-27 08:15:39] 2025-07-27 12:15:09,377 | INFO     | all data control threads have been joined
[2025-07-27 08:15:39] 2025-07-27 12:15:09,659 | INFO     | [job] retrieve thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:09,660 | INFO     | [job] queue monitor thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:09,691 | INFO     | [payload] failed_post thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:09,817 | INFO     | [job] job monitor thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:10,112 | INFO     | [job] validate thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:10,140 | INFO     | all payload control threads have been joined
[2025-07-27 08:15:39] 2025-07-27 12:15:10,178 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:10,238 | INFO     | [payload] validate_post thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:10,295 | INFO     | all job control threads have been joined
[2025-07-27 08:15:39] 2025-07-27 12:15:10,381 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:10,382 | INFO     | [data] control thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:10,660 | INFO     | [data] copytool_out thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:10,714 | INFO     | [data] copytool_in thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:10,960 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:11,145 | INFO     | [payload] control thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:11,300 | INFO     | [job] control thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:11,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 08:15:39] 2025-07-27 12:15:14,834 [wrapper] supervise_pilot (15 min periods counter: 10)
[2025-07-27 08:15:39] 2025-07-27 12:15:15,753 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:19,150 | INFO     | job.realtimelogging is not enabled
[2025-07-27 08:15:39] 2025-07-27 12:15:20,155 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 08:15:39] 2025-07-27 12:15:20,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140115018016576)>', '<ExcThread(monitor, started 140114399303424)>']
[2025-07-27 08:15:39] 2025-07-27 12:15:25,850 | INFO     | all workflow threads have been joined
[2025-07-27 08:15:39] 2025-07-27 12:15:25,850 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 08:15:39] 2025-07-27 12:15:25,859 | INFO     | traces error code: 0
[2025-07-27 08:15:39] 2025-07-27 12:15:25,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 08:15:39] 2025-07-27 12:15:38,700 | INFO     | PID=26635 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 08:15:39] 2025-07-27 12:15:38,700 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 08:15:39] 2025-07-27 12:15:38,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 08:15:39] 2025-07-27 12:15:38,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 08:15:39] 2025-07-27 12:15:38,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 08:15:39] 2025-07-27 12:15:38,701 | INFO     | [monitor] control thread has ended
[2025-07-27 08:15:39] 2025-07-27 12:15:38,787 [wrapper] ==== pilot stdout END ====
[2025-07-27 08:15:39] 2025-07-27 12:15:38,791 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 08:15:39] 2025-07-27 12:15:38,795 [wrapper] pilotpid: 26635
[2025-07-27 08:15:39] 2025-07-27 12:15:38,799 [wrapper] Pilot exit status: 0
[2025-07-27 08:15:39] 2025-07-27 12:15:38,815 [wrapper] pandaids: 6746013540
[2025-07-27 08:15:39] 2025-07-27 12:15:38,853 [wrapper] cleanup supervisor_pilot  1401 26636
[2025-07-27 08:15:39] 2025-07-27 12:15:38,858 [wrapper] Test setup, not cleaning
[2025-07-27 08:15:39] 2025-07-27 12:15:38,862 [wrapper] apfmon messages muted
[2025-07-27 08:15:39] 2025-07-27 12:15:38,866 [wrapper] ==== wrapper stdout END ====
[2025-07-27 08:15:39] 2025-07-27 12:15:38,870 [wrapper] ==== wrapper stderr END ====
[2025-07-27 08:15:39]  *** Error codes and diagnostics ***
[2025-07-27 08:15:39]     "exeErrorCode": 0,
[2025-07-27 08:15:39]     "exeErrorDiag": "",
[2025-07-27 08:15:39]     "pilotErrorCode": 0,
[2025-07-27 08:15:39]     "pilotErrorDiag": "",
[2025-07-27 08:15:39]  *** Listing of results directory ***
[2025-07-27 08:15:39] total 351792
[2025-07-27 08:15:39] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 23:36 pilot3.tar.gz
[2025-07-27 08:15:39] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 00:19 queuedata.json
[2025-07-27 08:15:39] -rwx------ 1 boincer umatlas     36292 Jul 27 00:20 runpilot2-wrapper.sh
[2025-07-27 08:15:39] -rw-r--r-- 1 boincer umatlas       100 Jul 27 06:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 08:15:39] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 06:00 run_atlas
[2025-07-27 08:15:39] -rw-r--r-- 1 boincer umatlas       105 Jul 27 06:00 job.xml
[2025-07-27 08:15:39] -rw-r--r-- 2 boincer umatlas 204425081 Jul 27 06:00 EVNT.45759979._000001.pool.root.1
[2025-07-27 08:15:39] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 06:00 start_atlas.sh
[2025-07-27 08:15:39] drwxrwx--x 2 boincer umatlas      4096 Jul 27 06:00 shared
[2025-07-27 08:15:39] -rw-r--r-- 2 boincer umatlas    542876 Jul 27 06:00 input.tar.gz
[2025-07-27 08:15:39] -rw-r--r-- 1 boincer umatlas         0 Jul 27 06:00 boinc_lockfile
[2025-07-27 08:15:39] -rw-r--r-- 1 boincer umatlas      2556 Jul 27 06:00 pandaJob.out
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas    980125 Jul 27 06:00 agis_schedconf.cvmfs.json
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas   1593052 Jul 27 06:00 agis_ddmendpoints.agis.ALL.json
[2025-07-27 08:15:39] drwx------ 4 boincer umatlas      4096 Jul 27 06:00 pilot3
[2025-07-27 08:15:39] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 08:12 init_data.xml
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas 149686464 Jul 27 08:14 HITS.45759981._000002.pool.root.1
[2025-07-27 08:15:39] -rw-r--r-- 1 boincer umatlas       529 Jul 27 08:14 boinc_task_state.xml
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas      1049 Jul 27 08:14 memory_monitor_summary.json
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas    382939 Jul 27 08:15 log.45759981._000002.job.log.tgz.1
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas        95 Jul 27 08:15 pilot_heartbeat.json
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas      7835 Jul 27 08:15 heartbeat.json
[2025-07-27 08:15:39] -rw-r--r-- 1 boincer umatlas        27 Jul 27 08:15 wrapper_checkpoint.txt
[2025-07-27 08:15:39] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 08:15 boinc_mmap_file
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas       745 Jul 27 08:15 pilotlog.txt
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas    741210 Jul 27 08:15 log.45759981._000002.job.log.1
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas       357 Jul 27 08:15 output.list
[2025-07-27 08:15:39] -rw-r--r-- 1 boincer umatlas       620 Jul 27 08:15 runtime_log
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas   1146880 Jul 27 08:15 result.tar.gz
[2025-07-27 08:15:39] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 08:15 runtime_log.err
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas       662 Jul 27 08:15 CGoKDmq27z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgu1KDmCgjrKn.diag
[2025-07-27 08:15:39] -rw-r--r-- 1 boincer umatlas     20954 Jul 27 08:15 stderr.txt
[2025-07-27 08:15:39] HITS file was successfully produced:
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas 149686464 Jul 27 08:14 shared/HITS.pool.root.1
[2025-07-27 08:15:39]  *** Contents of shared directory: ***
[2025-07-27 08:15:39] total 347488
[2025-07-27 08:15:39] -rw-r--r-- 2 boincer umatlas 204425081 Jul 27 06:00 ATLAS.root_0
[2025-07-27 08:15:39] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 06:00 start_atlas.sh
[2025-07-27 08:15:39] -rw-r--r-- 2 boincer umatlas    542876 Jul 27 06:00 input.tar.gz
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas 149686464 Jul 27 08:14 HITS.pool.root.1
[2025-07-27 08:15:39] -rw------- 1 boincer umatlas   1146880 Jul 27 08:15 result.tar.gz
08:15:40 (23042): run_atlas exited; CPU time 89135.486860
08:15:40 (23042): called boinc_finish(0)

</stderr_txt>
]]>

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