Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:32:43 (12502): wrapper (7.7.26015): starting
05:32:43 (12502): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 05:32:43] Arguments: --nthreads 8
[2025-07-27 05:32:43] Threads: 8
[2025-07-27 05:32:43] Checking for CVMFS
[2025-07-27 05:32:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 05:32:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 05:32:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 05:32:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 05:32:43] 2.11.2.0 2846 111826 111344 148807 2 56 13277506 20275200 1 130560 0 29108605 99.941 10549516 10813 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 05:32:43] CVMFS is ok
[2025-07-27 05:32:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 05:32:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 05:32:43] Further information can be found at the LHC@home message board.
[2025-07-27 05:32:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 05:32:43] Checking for apptainer binary...
[2025-07-27 05:32:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 05:32:43] Running /usr/bin/apptainer --version
[2025-07-27 05:32:43] apptainer version 1.3.2-1.el7
[2025-07-27 05:32:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 05:32:45] c-204-10.aglt2.org
[2025-07-27 05:32:45] apptainer works
[2025-07-27 05:32:45] Set ATHENA_PROC_NUMBER=8
[2025-07-27 05:32:45] Set ATHENA_CORE_NUMBER=8
[2025-07-27 05:32:45] Starting ATLAS job with PandaID=6745948417
[2025-07-27 05:32:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 08:35:25]  *** The last 200 lines of the pilot log: ***
[2025-07-27 08:35:25] 2025-07-27 12:34:53,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 08:35:25] 2025-07-27 12:34:53,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 08:35:25] 2025-07-27 12:34:53,502 | INFO     | fitting pss+swap vs Time
[2025-07-27 08:35:25] 2025-07-27 12:34:53,502 | INFO     | sum of square deviations: 1778377530.0
[2025-07-27 08:35:25] 2025-07-27 12:34:53,503 | INFO     | sum of deviations: -8893096548.000004
[2025-07-27 08:35:25] 2025-07-27 12:34:53,503 | INFO     | mean x: 1753614244.0
[2025-07-27 08:35:25] 2025-07-27 12:34:53,503 | INFO     | mean y: 2504368.2011173186
[2025-07-27 08:35:25] 2025-07-27 12:34:53,504 | INFO     | -- intersect: 8771767652.718683
[2025-07-27 08:35:25] 2025-07-27 12:34:53,504 | INFO     | intersect: 8771767652.718683
[2025-07-27 08:35:25] 2025-07-27 12:34:53,504 | INFO     | chi2: 2.4038569490086283
[2025-07-27 08:35:25] 2025-07-27 12:34:53,504 | INFO     | sum of square deviations: 1633472487.5
[2025-07-27 08:35:25] 2025-07-27 12:34:53,505 | INFO     | sum of deviations: 3116013559.4999804
[2025-07-27 08:35:25] 2025-07-27 12:34:53,505 | INFO     | mean x: 1753614091.5
[2025-07-27 08:35:25] 2025-07-27 12:34:53,506 | INFO     | mean y: 2516724.0977011495
[2025-07-27 08:35:25] 2025-07-27 12:34:53,506 | INFO     | -- intersect: -3342679065.27689
[2025-07-27 08:35:25] 2025-07-27 12:34:53,506 | INFO     | intersect: -3342679065.27689
[2025-07-27 08:35:25] 2025-07-27 12:34:53,506 | INFO     | chi2: 1.6392969116923852
[2025-07-27 08:35:25] 2025-07-27 12:34:53,506 | INFO     | current chi2=1.6392969116923852 (change=31.805554720365304 %)
[2025-07-27 08:35:25] 2025-07-27 12:34:53,507 | INFO     | sum of square deviations: 1496660620.0
[2025-07-27 08:35:25] 2025-07-27 12:34:53,507 | INFO     | sum of deviations: 3043928975.000001
[2025-07-27 08:35:25] 2025-07-27 12:34:53,508 | INFO     | mean x: 1753613939.0
[2025-07-27 08:35:25] 2025-07-27 12:34:53,508 | INFO     | mean y: 2516643.822485207
[2025-07-27 08:35:25] 2025-07-27 12:34:53,508 | INFO     | -- intersect: -3564007529.096546
[2025-07-27 08:35:25] 2025-07-27 12:34:53,508 | INFO     | intersect: -3564007529.096546
[2025-07-27 08:35:25] 2025-07-27 12:34:53,508 | INFO     | chi2: 1.6397791355115408
[2025-07-27 08:35:25] 2025-07-27 12:34:53,508 | INFO     | current chi2=1.6397791355115408 (change=-0.029416502630855598 %)
[2025-07-27 08:35:25] 2025-07-27 12:34:53,509 | INFO     | right removable region: 168
[2025-07-27 08:35:25] 2025-07-27 12:34:53,509 | INFO     | sum of square deviations: 1633472487.5
[2025-07-27 08:35:25] 2025-07-27 12:34:53,510 | INFO     | sum of deviations: -35525020637.500015
[2025-07-27 08:35:25] 2025-07-27 12:34:53,510 | INFO     | mean x: 1753614396.5
[2025-07-27 08:35:25] 2025-07-27 12:34:53,510 | INFO     | mean y: 2532024.9022988505
[2025-07-27 08:35:25] 2025-07-27 12:34:53,510 | INFO     | -- intersect: 38140418094.366714
[2025-07-27 08:35:25] 2025-07-27 12:34:53,510 | INFO     | intersect: 38140418094.366714
[2025-07-27 08:35:25] 2025-07-27 12:34:53,511 | INFO     | chi2: 0.9617591008689083
[2025-07-27 08:35:25] 2025-07-27 12:34:53,511 | INFO     | current chi2=0.9617591008689083 (change=59.991001075769255 %)
[2025-07-27 08:35:25] 2025-07-27 12:34:53,511 | INFO     | sum of square deviations: 1496660620.0
[2025-07-27 08:35:25] 2025-07-27 12:34:53,512 | INFO     | sum of deviations: -37011998026.0
[2025-07-27 08:35:25] 2025-07-27 12:34:53,512 | INFO     | mean x: 1753614549.0
[2025-07-27 08:35:25] 2025-07-27 12:34:53,512 | INFO     | mean y: 2533642.408284024
[2025-07-27 08:35:25] 2025-07-27 12:34:53,512 | INFO     | -- intersect: 43368930378.33154
[2025-07-27 08:35:25] 2025-07-27 12:34:53,513 | INFO     | intersect: 43368930378.33154
[2025-07-27 08:35:25] 2025-07-27 12:34:53,513 | INFO     | chi2: 0.9352476159129318
[2025-07-27 08:35:25] 2025-07-27 12:34:53,513 | INFO     | current chi2=0.9352476159129318 (change=2.7565619012104428 %)
[2025-07-27 08:35:25] 2025-07-27 12:34:53,513 | INFO     | left removable region: 20
[2025-07-27 08:35:25] 2025-07-27 12:34:53,513 | INFO     | sum of square deviations: 1005179777.0
[2025-07-27 08:35:25] 2025-07-27 12:34:53,514 | INFO     | sum of deviations: -14188011807.5
[2025-07-27 08:35:25] 2025-07-27 12:34:53,514 | INFO     | mean x: 1753614518.5
[2025-07-27 08:35:25] 2025-07-27 12:34:53,514 | INFO     | mean y: 2534861.7635135134
[2025-07-27 08:35:25] 2025-07-27 12:34:53,515 | INFO     | -- intersect: 24754628033.134018
[2025-07-27 08:35:25] 2025-07-27 12:34:53,515 | INFO     | intersect: 24754628033.134018
[2025-07-27 08:35:25] 2025-07-27 12:34:53,515 | INFO     | chi2: 0.11326601731071678
[2025-07-27 08:35:25] 2025-07-27 12:34:53,515 | INFO     | -- intersect: 24754628033.134018
[2025-07-27 08:35:25] 2025-07-27 12:34:53,515 | INFO     | current memory leak: -14.11 B/s (using 148 data points, chi2=0.11)
[2025-07-27 08:35:25] 2025-07-27 12:34:53,516 | INFO     | could have reported an average CPU frequency of 2025 MHz (9 samples)
[2025-07-27 08:35:25] 2025-07-27 12:34:53,516 | INFO     | ..............................
[2025-07-27 08:35:25] 2025-07-27 12:34:53,516 | INFO     | . Timing measurements:
[2025-07-27 08:35:25] 2025-07-27 12:34:53,516 | INFO     | . get job = 0 s
[2025-07-27 08:35:25] 2025-07-27 12:34:53,516 | INFO     | . initial setup = 2 s
[2025-07-27 08:35:25] 2025-07-27 12:34:53,516 | INFO     | . payload setup = 11 s
[2025-07-27 08:35:25] 2025-07-27 12:34:53,516 | INFO     | . stage-in = 0 s
[2025-07-27 08:35:25] 2025-07-27 12:34:53,517 | INFO     | . payload execution = 10866 s
[2025-07-27 08:35:25] 2025-07-27 12:34:53,517 | INFO     | . stage-out = 2 s
[2025-07-27 08:35:25] 2025-07-27 12:34:53,517 | INFO     | . log creation = 0 s
[2025-07-27 08:35:25] 2025-07-27 12:34:53,517 | INFO     | ..............................
[2025-07-27 08:35:25] 2025-07-27 12:34:53,611 | INFO     | 
[2025-07-27 08:35:25] 2025-07-27 12:34:53,612 | INFO     | job summary report
[2025-07-27 08:35:25] 2025-07-27 12:34:53,612 | INFO     | --------------------------------------------------
[2025-07-27 08:35:25] 2025-07-27 12:34:53,612 | INFO     | PanDA job id: 6745948417
[2025-07-27 08:35:25] 2025-07-27 12:34:53,612 | INFO     | task id: 45759912
[2025-07-27 08:35:25] 2025-07-27 12:34:53,612 | INFO     | errors: (none)
[2025-07-27 08:35:25] 2025-07-27 12:34:53,613 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 08:35:25] 2025-07-27 12:34:53,613 | INFO     | pilot state: finished 
[2025-07-27 08:35:25] 2025-07-27 12:34:53,613 | INFO     | transexitcode: 0
[2025-07-27 08:35:25] 2025-07-27 12:34:53,613 | INFO     | exeerrorcode: 0
[2025-07-27 08:35:25] 2025-07-27 12:34:53,613 | INFO     | exeerrordiag: 
[2025-07-27 08:35:25] 2025-07-27 12:34:53,614 | INFO     | exitcode: 0
[2025-07-27 08:35:25] 2025-07-27 12:34:53,614 | INFO     | exitmsg: OK
[2025-07-27 08:35:25] 2025-07-27 12:34:53,614 | INFO     | cpuconsumptiontime: 81298 s
[2025-07-27 08:35:25] 2025-07-27 12:34:53,614 | INFO     | nevents: 400
[2025-07-27 08:35:25] 2025-07-27 12:34:53,614 | INFO     | neventsw: 0
[2025-07-27 08:35:25] 2025-07-27 12:34:53,614 | INFO     | pid: 22676
[2025-07-27 08:35:25] 2025-07-27 12:34:53,615 | INFO     | pgrp: 22676
[2025-07-27 08:35:25] 2025-07-27 12:34:53,615 | INFO     | corecount: 8
[2025-07-27 08:35:25] 2025-07-27 12:34:53,615 | INFO     | event service: False
[2025-07-27 08:35:25] 2025-07-27 12:34:53,615 | INFO     | sizes: {0: 2397294, 1: 2397493, 6: 2397755, 11: 2397783, 10881: 2426818, 10882: 2426817, 10885: 2435999, 10887: 2436055, 10896: 2436313}
[2025-07-27 08:35:25] 2025-07-27 12:34:53,615 | INFO     | --------------------------------------------------
[2025-07-27 08:35:25] 2025-07-27 12:34:53,615 | INFO     | 
[2025-07-27 08:35:25] 2025-07-27 12:34:53,616 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 08:35:25] 2025-07-27 12:34:53,645 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,645 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,645 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,645 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,646 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,646 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,646 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,646 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,646 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,647 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,647 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,647 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,647 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,647 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,647 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,648 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,648 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,648 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 08:35:25] 2025-07-27 12:34:53,648 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,648 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 08:35:25] 2025-07-27 12:34:53,649 | INFO     | job 6745948417 has completed (purged errors)
[2025-07-27 08:35:25] 2025-07-27 12:34:53,649 | INFO     | overall cleanup function is called
[2025-07-27 08:35:25] 2025-07-27 12:34:54,657 | INFO     | --- collectZombieJob: --- 10, [22676]
[2025-07-27 08:35:25] 2025-07-27 12:34:54,657 | INFO     | zombie collector waiting for pid 22676
[2025-07-27 08:35:25] 2025-07-27 12:34:54,657 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 08:35:25] 2025-07-27 12:34:54,658 | INFO     | collected zombie processes
[2025-07-27 08:35:25] 2025-07-27 12:34:54,658 | INFO     | will attempt to kill all subprocesses of pid=22676
[2025-07-27 08:35:25] 2025-07-27 12:34:54,747 | INFO     | process IDs to be killed: [22676] (in reverse order)
[2025-07-27 08:35:25] 2025-07-27 12:34:54,809 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 08:35:25] 2025-07-27 12:34:54,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 08:35:25] 2025-07-27 12:34:54,814 | INFO     | did not find any defunct processes belonging to 22676
[2025-07-27 08:35:25] 2025-07-27 12:34:54,817 | INFO     | did not find any defunct processes belonging to 22676
[2025-07-27 08:35:25] 2025-07-27 12:34:54,818 | INFO     | ready for new job
[2025-07-27 08:35:25] 2025-07-27 12:34:54,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 08:35:25] 2025-07-27 12:34:54,819 | INFO     | ***************************************
[2025-07-27 08:35:25] 2025-07-27 12:34:54,819 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 08:35:25] 2025-07-27 12:34:54,820 | INFO     | ***************************************
[2025-07-27 08:35:25] 2025-07-27 12:34:54,820 | INFO     | 
[2025-07-27 08:35:25] 2025-07-27 12:34:54,820 | INFO     | architecture information:
[2025-07-27 08:35:25] 2025-07-27 12:34:54,821 | INFO     | executing command: cat /etc/os-release
[2025-07-27 08:35:25] 2025-07-27 12:34:54,838 | INFO     | cat /etc/os-release:
[2025-07-27 08:35:25] NAME="CentOS Linux"
[2025-07-27 08:35:25] VERSION="7 (Core)"
[2025-07-27 08:35:25] ID="centos"
[2025-07-27 08:35:25] ID_LIKE="rhel fedora"
[2025-07-27 08:35:25] VERSION_ID="7"
[2025-07-27 08:35:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 08:35:25] ANSI_COLOR="0;31"
[2025-07-27 08:35:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 08:35:25] HOME_URL="https://www.centos.org/"
[2025-07-27 08:35:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 08:35:25] 
[2025-07-27 08:35:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 08:35:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 08:35:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 08:35:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 08:35:25] 
[2025-07-27 08:35:25] 2025-07-27 12:34:54,839 | INFO     | ***************************************
[2025-07-27 08:35:25] 2025-07-27 12:34:55,342 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 08:35:25] 2025-07-27 12:34:55,362 | INFO     | sufficient remaining disk space (18606981120 B)
[2025-07-27 08:35:25] 2025-07-27 12:34:55,362 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 08:35:25] 2025-07-27 12:34:55,362 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 08:35:25] 2025-07-27 12:34:55,363 | INFO     | update_server=False
[2025-07-27 08:35:25] 2025-07-27 12:34:55,363 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 08:35:25] 2025-07-27 12:34:55,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:35:25] 2025-07-27 12:34:55,529 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 08:35:25] 2025-07-27 12:34:55,555 | INFO     | all job control threads have been joined
[2025-07-27 08:35:25] 2025-07-27 12:34:55,580 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 08:35:25] 2025-07-27 12:34:55,581 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 08:35:25] 2025-07-27 12:34:55,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:35:25] 2025-07-27 12:34:55,581 | INFO     | will abort loop
[2025-07-27 08:35:25] 2025-07-27 12:34:55,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 08:35:25] 2025-07-27 12:34:56,068 | INFO     | all data control threads have been joined
[2025-07-27 08:35:25] 2025-07-27 12:34:56,250 | INFO     | all payload control threads have been joined
[2025-07-27 08:35:25] 2025-07-27 12:34:56,368 | INFO     | [job] queue monitor thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:34:56,368 | INFO     | [job] retrieve thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:34:56,441 | INFO     | [payload] validate_post thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:34:56,557 | INFO     | [job] control thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:34:56,586 | INFO     | [job] job monitor thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:34:56,640 | INFO     | [payload] failed_post thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:34:56,641 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:34:56,853 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:34:57,073 | INFO     | [data] control thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:34:57,256 | INFO     | [payload] control thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:34:57,523 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:34:57,533 | INFO     | [data] copytool_out thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:34:57,722 | INFO     | [job] validate thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:34:57,738 | INFO     | [data] copytool_in thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:34:59,893 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:35:06,081 | INFO     | job.realtimelogging is not enabled
[2025-07-27 08:35:25] 2025-07-27 12:35:07,083 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 08:35:25] 2025-07-27 12:35:07,302 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140289021241152)>', '<ExcThread(monitor, started 140288420980480)>']
[2025-07-27 08:35:25] 2025-07-27 12:35:12,328 | INFO     | all workflow threads have been joined
[2025-07-27 08:35:25] 2025-07-27 12:35:12,328 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 08:35:25] 2025-07-27 12:35:12,329 | INFO     | traces error code: 0
[2025-07-27 08:35:25] 2025-07-27 12:35:12,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 08:35:25] 2025-07-27 12:35:25,353 | INFO     | PID=16108 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 08:35:25] 2025-07-27 12:35:25,353 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 08:35:25] 2025-07-27 12:35:25,354 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 08:35:25] 2025-07-27 12:35:25,354 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 08:35:25] 2025-07-27 12:35:25,354 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 08:35:25] 2025-07-27 12:35:25,354 | INFO     | [monitor] control thread has ended
[2025-07-27 08:35:25] 2025-07-27 12:35:25,498 [wrapper] ==== pilot stdout END ====
[2025-07-27 08:35:25] 2025-07-27 12:35:25,503 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 08:35:25] 2025-07-27 12:35:25,508 [wrapper] pilotpid: 16108
[2025-07-27 08:35:25] 2025-07-27 12:35:25,513 [wrapper] Pilot exit status: 0
[2025-07-27 08:35:25] 2025-07-27 12:35:25,532 [wrapper] pandaids: 6745948417
[2025-07-27 08:35:25] 2025-07-27 12:35:25,576 [wrapper] cleanup supervisor_pilot  5716 16109
[2025-07-27 08:35:25] 2025-07-27 12:35:25,581 [wrapper] Test setup, not cleaning
[2025-07-27 08:35:25] 2025-07-27 12:35:25,586 [wrapper] apfmon messages muted
[2025-07-27 08:35:25] 2025-07-27 12:35:25,590 [wrapper] ==== wrapper stdout END ====
[2025-07-27 08:35:25] 2025-07-27 12:35:25,595 [wrapper] ==== wrapper stderr END ====
[2025-07-27 08:35:25]  *** Error codes and diagnostics ***
[2025-07-27 08:35:25]     "exeErrorCode": 0,
[2025-07-27 08:35:25]     "exeErrorDiag": "",
[2025-07-27 08:35:25]     "pilotErrorCode": 0,
[2025-07-27 08:35:25]     "pilotErrorDiag": "",
[2025-07-27 08:35:25]  *** Listing of results directory ***
[2025-07-27 08:35:25] total 398660
[2025-07-27 08:35:25] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 21:40 pilot3.tar.gz
[2025-07-27 08:35:25] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 21:48 queuedata.json
[2025-07-27 08:35:25] -rwx------ 1 boincer umatlas     36292 Jul 26 21:50 runpilot2-wrapper.sh
[2025-07-27 08:35:25] -rw-r--r-- 1 boincer umatlas       100 Jul 27 05:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 08:35:25] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 05:32 run_atlas
[2025-07-27 08:35:25] -rw-r--r-- 1 boincer umatlas       105 Jul 27 05:32 job.xml
[2025-07-27 08:35:25] -rw-r--r-- 2 boincer umatlas 233252238 Jul 27 05:32 EVNT.45759910._000005.pool.root.1
[2025-07-27 08:35:25] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 05:32 start_atlas.sh
[2025-07-27 08:35:25] drwxrwx--x 2 boincer umatlas      4096 Jul 27 05:32 shared
[2025-07-27 08:35:25] -rw-r--r-- 2 boincer umatlas    542875 Jul 27 05:32 input.tar.gz
[2025-07-27 08:35:25] -rw-r--r-- 1 boincer umatlas         0 Jul 27 05:32 boinc_lockfile
[2025-07-27 08:35:25] -rw-r--r-- 1 boincer umatlas      2556 Jul 27 05:32 pandaJob.out
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas    980125 Jul 27 05:32 agis_schedconf.cvmfs.json
[2025-07-27 08:35:25] drwx------ 4 boincer umatlas      4096 Jul 27 05:33 pilot3
[2025-07-27 08:35:25] -rw-r--r-- 1 boincer umatlas      5825 Jul 27 08:30 init_data.xml
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas 168406292 Jul 27 08:34 HITS.45759912._000117.pool.root.1
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas      1051 Jul 27 08:34 memory_monitor_summary.json
[2025-07-27 08:35:25] -rw-r--r-- 1 boincer umatlas       531 Jul 27 08:34 boinc_task_state.xml
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas        95 Jul 27 08:34 pilot_heartbeat.json
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas   1593052 Jul 27 08:34 agis_ddmendpoints.agis.ALL.json
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas    369184 Jul 27 08:34 log.45759912._000117.job.log.tgz.1
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas      7842 Jul 27 08:34 heartbeat.json
[2025-07-27 08:35:25] -rw-r--r-- 1 boincer umatlas        28 Jul 27 08:34 wrapper_checkpoint.txt
[2025-07-27 08:35:25] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 08:34 boinc_mmap_file
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas       745 Jul 27 08:35 pilotlog.txt
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas    977664 Jul 27 08:35 log.45759912._000117.job.log.1
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas       357 Jul 27 08:35 output.list
[2025-07-27 08:35:25] -rw-r--r-- 1 boincer umatlas       620 Jul 27 08:35 runtime_log
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas   1361920 Jul 27 08:35 result.tar.gz
[2025-07-27 08:35:25] -rw-r--r-- 1 boincer umatlas      8661 Jul 27 08:35 runtime_log.err
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas       662 Jul 27 08:35 dgNODm9h5z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdrTLDmDnu9ym.diag
[2025-07-27 08:35:25] -rw-r--r-- 1 boincer umatlas     20930 Jul 27 08:35 stderr.txt
[2025-07-27 08:35:25] HITS file was successfully produced:
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas 168406292 Jul 27 08:34 shared/HITS.pool.root.1
[2025-07-27 08:35:25]  *** Contents of shared directory: ***
[2025-07-27 08:35:25] total 394136
[2025-07-27 08:35:25] -rw-r--r-- 2 boincer umatlas 233252238 Jul 27 05:32 ATLAS.root_0
[2025-07-27 08:35:25] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 05:32 start_atlas.sh
[2025-07-27 08:35:25] -rw-r--r-- 2 boincer umatlas    542875 Jul 27 05:32 input.tar.gz
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas 168406292 Jul 27 08:34 HITS.pool.root.1
[2025-07-27 08:35:25] -rw------- 1 boincer umatlas   1361920 Jul 27 08:35 result.tar.gz
08:35:26 (12502): run_atlas exited; CPU time 81204.624393
08:35:26 (12502): called boinc_finish(0)

</stderr_txt>
]]>

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