Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:29:50 (8665): wrapper (7.7.26015): starting
05:29:50 (8665): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 05:29:50] Arguments: --nthreads 12
[2025-07-27 05:29:50] Threads: 12
[2025-07-27 05:29:50] Checking for CVMFS
[2025-07-27 05:29:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 05:29:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 05:29:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 05:29:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 05:29:50] 2.11.2.0 2998 111777 103336 148807 1 56 14635457 20275201 1 130560 0 38208937 99.971 9711799 10999 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 05:29:50] CVMFS is ok
[2025-07-27 05:29:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 05:29:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 05:29:50] Further information can be found at the LHC@home message board.
[2025-07-27 05:29:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 05:29:50] Checking for apptainer binary...
[2025-07-27 05:29:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 05:29:50] Running /usr/bin/apptainer --version
[2025-07-27 05:29:50] apptainer version 1.3.2-1.el7
[2025-07-27 05:29:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 05:29:52] c-205-25.aglt2.org
[2025-07-27 05:29:52] apptainer works
[2025-07-27 05:29:52] Set ATHENA_PROC_NUMBER=12
[2025-07-27 05:29:52] Set ATHENA_CORE_NUMBER=12
[2025-07-27 05:29:52] Starting ATLAS job with PandaID=6745940241
[2025-07-27 05:29:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 07:02:10]  *** The last 200 lines of the pilot log: ***
[2025-07-27 07:02:10] 2025-07-27 11:01:28,489 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 07:02:10] 2025-07-27 11:01:28,491 | INFO     | fitting pss+swap vs Time
[2025-07-27 07:02:10] 2025-07-27 11:01:28,491 | INFO     | sum of square deviations: 226022842.5
[2025-07-27 07:02:10] 2025-07-27 11:01:28,492 | INFO     | sum of deviations: -5049663112.500002
[2025-07-27 07:02:10] 2025-07-27 11:01:28,492 | INFO     | mean x: 1753611350.5
[2025-07-27 07:02:10] 2025-07-27 11:01:28,492 | INFO     | mean y: 2695006.611111111
[2025-07-27 07:02:10] 2025-07-27 11:01:28,492 | INFO     | -- intersect: 39180799539.48001
[2025-07-27 07:02:10] 2025-07-27 11:01:28,492 | INFO     | intersect: 39180799539.48001
[2025-07-27 07:02:10] 2025-07-27 11:01:28,492 | INFO     | chi2: 2.377448215937501
[2025-07-27 07:02:10] 2025-07-27 11:01:28,492 | INFO     | -- intersect: 39180799539.48001
[2025-07-27 07:02:10] 2025-07-27 11:01:28,493 | INFO     | current memory leak: -22.34 B/s (using 90 data points, chi2=2.38)
[2025-07-27 07:02:10] 2025-07-27 11:01:28,493 | INFO     | could have reported an average CPU frequency of 2050 MHz (6 samples)
[2025-07-27 07:02:10] 2025-07-27 11:01:28,499 | INFO     | adding to output.list: log.45758392._000118.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/ae/log.45758392._000118.job.log.tg
[2025-07-27 07:02:10] 2025-07-27 11:01:28,500 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 07:02:10] 2025-07-27 11:01:28,500 | INFO     | summary of transferred files:
[2025-07-27 07:02:10] 2025-07-27 11:01:28,500 | INFO     |  -- lfn=log.45758392._000118.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 07:02:10] 2025-07-27 11:01:28,500 | INFO     | stage-out finished correctly
[2025-07-27 07:02:10] 2025-07-27 11:01:30,996 | INFO     | monitor loop #410: job 0:6745940241 is in state 'finished'
[2025-07-27 07:02:10] 2025-07-27 11:01:30,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:02:10] 2025-07-27 11:01:31,723 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 07:02:10] 2025-07-27 11:01:33,500 | INFO     | monitor loop #411: job 0:6745940241 is in state 'finished'
[2025-07-27 07:02:10] 2025-07-27 11:01:33,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:02:10] 2025-07-27 11:01:34,232 | INFO     | job 6745940241 has state=finished
[2025-07-27 07:02:10] 2025-07-27 11:01:34,232 | INFO     | preparing for final server update for job 6745940241 in state='finished'
[2025-07-27 07:02:10] 2025-07-27 11:01:34,241 | INFO     | this job has now completed (state=finished)
[2025-07-27 07:02:10] 2025-07-27 11:01:34,241 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 07:02:10] 2025-07-27 11:01:34,241 | INFO     | log transfer has been attempted: DONE
[2025-07-27 07:02:10] 2025-07-27 11:01:34,241 | INFO     | job 6745940241 has finished - writing final server update
[2025-07-27 07:02:10] 2025-07-27 11:01:34,241 | INFO     | total number of processed events: 400 (read)
[2025-07-27 07:02:10] 2025-07-27 11:01:34,242 | INFO     | executing command: lscpu
[2025-07-27 07:02:10] 2025-07-27 11:01:34,267 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 07:02:10] 2025-07-27 11:01:34,435 | INFO     | PID=12420 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 07:02:10] 2025-07-27 11:01:36,003 | INFO     | monitor loop #412: job 0:6745940241 is in state 'finished'
[2025-07-27 07:02:10] 2025-07-27 11:01:36,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:02:10] 2025-07-27 11:01:38,506 | INFO     | monitor loop #413: job 0:6745940241 is in state 'finished'
[2025-07-27 07:02:10] 2025-07-27 11:01:38,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:02:10] 2025-07-27 11:01:38,804 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 07:02:10] 2025-07-27 11:01:38,808 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-07-27 07:02:10] 2025-07-27 11:01:38,811 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745940241/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 07:02:10] 2025-07-27 11:01:38,811 | INFO     | extracted standard info from prmon json
[2025-07-27 07:02:10] 2025-07-27 11:01:38,812 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 07:02:10] 2025-07-27 11:01:38,812 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 07:02:10] 2025-07-27 11:01:38,812 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 07:02:10] 2025-07-27 11:01:38,813 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 07:02:10] 2025-07-27 11:01:38,815 | INFO     | fitting pss+swap vs Time
[2025-07-27 07:02:10] 2025-07-27 11:01:38,815 | INFO     | sum of square deviations: 177275882.0
[2025-07-27 07:02:10] 2025-07-27 11:01:38,816 | INFO     | sum of deviations: -13143487853.999998
[2025-07-27 07:02:10] 2025-07-27 11:01:38,816 | INFO     | mean x: 1753611442.0
[2025-07-27 07:02:10] 2025-07-27 11:01:38,816 | INFO     | mean y: 2787144.421686747
[2025-07-27 07:02:10] 2025-07-27 11:01:38,816 | INFO     | -- intersect: 130018051649.2821
[2025-07-27 07:02:10] 2025-07-27 11:01:38,816 | INFO     | intersect: 130018051649.2821
[2025-07-27 07:02:10] 2025-07-27 11:01:38,816 | INFO     | chi2: 0.06942751214909257
[2025-07-27 07:02:10] 2025-07-27 11:01:38,816 | INFO     | -- intersect: 130018051649.2821
[2025-07-27 07:02:10] 2025-07-27 11:01:38,816 | INFO     | current memory leak: -74.14 B/s (using 83 data points, chi2=0.07)
[2025-07-27 07:02:10] 2025-07-27 11:01:38,817 | INFO     | could have reported an average CPU frequency of 1998 MHz (7 samples)
[2025-07-27 07:02:10] 2025-07-27 11:01:38,817 | INFO     | ..............................
[2025-07-27 07:02:10] 2025-07-27 11:01:38,817 | INFO     | . Timing measurements:
[2025-07-27 07:02:10] 2025-07-27 11:01:38,817 | INFO     | . get job = 0 s
[2025-07-27 07:02:10] 2025-07-27 11:01:38,817 | INFO     | . initial setup = 2 s
[2025-07-27 07:02:10] 2025-07-27 11:01:38,817 | INFO     | . payload setup = 9 s
[2025-07-27 07:02:10] 2025-07-27 11:01:38,817 | INFO     | . stage-in = 0 s
[2025-07-27 07:02:10] 2025-07-27 11:01:38,818 | INFO     | . payload execution = 5448 s
[2025-07-27 07:02:10] 2025-07-27 11:01:38,818 | INFO     | . stage-out = 6 s
[2025-07-27 07:02:10] 2025-07-27 11:01:38,818 | INFO     | . log creation = 0 s
[2025-07-27 07:02:10] 2025-07-27 11:01:38,818 | INFO     | ..............................
[2025-07-27 07:02:10] 2025-07-27 11:01:39,013 | INFO     | 
[2025-07-27 07:02:10] 2025-07-27 11:01:39,013 | INFO     | job summary report
[2025-07-27 07:02:10] 2025-07-27 11:01:39,014 | INFO     | --------------------------------------------------
[2025-07-27 07:02:10] 2025-07-27 11:01:39,014 | INFO     | PanDA job id: 6745940241
[2025-07-27 07:02:10] 2025-07-27 11:01:39,014 | INFO     | task id: 45758392
[2025-07-27 07:02:10] 2025-07-27 11:01:39,014 | INFO     | errors: (none)
[2025-07-27 07:02:10] 2025-07-27 11:01:39,014 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 07:02:10] 2025-07-27 11:01:39,014 | INFO     | pilot state: finished 
[2025-07-27 07:02:10] 2025-07-27 11:01:39,015 | INFO     | transexitcode: 0
[2025-07-27 07:02:10] 2025-07-27 11:01:39,015 | INFO     | exeerrorcode: 0
[2025-07-27 07:02:10] 2025-07-27 11:01:39,015 | INFO     | exeerrordiag: 
[2025-07-27 07:02:10] 2025-07-27 11:01:39,015 | INFO     | exitcode: 0
[2025-07-27 07:02:10] 2025-07-27 11:01:39,015 | INFO     | exitmsg: OK
[2025-07-27 07:02:10] 2025-07-27 11:01:39,015 | INFO     | cpuconsumptiontime: 60354 s
[2025-07-27 07:02:10] 2025-07-27 11:01:39,016 | INFO     | nevents: 400
[2025-07-27 07:02:10] 2025-07-27 11:01:39,016 | INFO     | neventsw: 0
[2025-07-27 07:02:10] 2025-07-27 11:01:39,016 | INFO     | pid: 18885
[2025-07-27 07:02:10] 2025-07-27 11:01:39,016 | INFO     | pgrp: 18885
[2025-07-27 07:02:10] 2025-07-27 11:01:39,016 | INFO     | corecount: 12
[2025-07-27 07:02:10] 2025-07-27 11:01:39,016 | INFO     | event service: False
[2025-07-27 07:02:10] 2025-07-27 11:01:39,016 | INFO     | sizes: {0: 2397297, 1: 2397496, 6: 2397758, 12: 2397786, 5461: 2424295, 5468: 2433487, 5471: 2433671, 5478: 2433695}
[2025-07-27 07:02:10] 2025-07-27 11:01:39,017 | INFO     | --------------------------------------------------
[2025-07-27 07:02:10] 2025-07-27 11:01:39,017 | INFO     | 
[2025-07-27 07:02:10] 2025-07-27 11:01:39,017 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 07:02:10] 2025-07-27 11:01:39,040 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,041 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,041 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,041 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,041 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,041 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,043 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 07:02:10] 2025-07-27 11:01:39,044 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,044 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 07:02:10] 2025-07-27 11:01:39,044 | INFO     | job 6745940241 has completed (purged errors)
[2025-07-27 07:02:10] 2025-07-27 11:01:39,044 | INFO     | overall cleanup function is called
[2025-07-27 07:02:10] 2025-07-27 11:01:40,052 | INFO     | --- collectZombieJob: --- 10, [18885]
[2025-07-27 07:02:10] 2025-07-27 11:01:40,052 | INFO     | zombie collector waiting for pid 18885
[2025-07-27 07:02:10] 2025-07-27 11:01:40,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 07:02:10] 2025-07-27 11:01:40,052 | INFO     | collected zombie processes
[2025-07-27 07:02:10] 2025-07-27 11:01:40,052 | INFO     | will attempt to kill all subprocesses of pid=18885
[2025-07-27 07:02:10] 2025-07-27 11:01:40,143 | INFO     | process IDs to be killed: [18885] (in reverse order)
[2025-07-27 07:02:10] 2025-07-27 11:01:40,195 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 07:02:10] 2025-07-27 11:01:40,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 07:02:10] 2025-07-27 11:01:40,199 | INFO     | did not find any defunct processes belonging to 18885
[2025-07-27 07:02:10] 2025-07-27 11:01:40,203 | INFO     | did not find any defunct processes belonging to 18885
[2025-07-27 07:02:10] 2025-07-27 11:01:40,203 | INFO     | ready for new job
[2025-07-27 07:02:10] 2025-07-27 11:01:40,203 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 07:02:10] 2025-07-27 11:01:40,205 | INFO     | ***************************************
[2025-07-27 07:02:10] 2025-07-27 11:01:40,205 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 07:02:10] 2025-07-27 11:01:40,205 | INFO     | ***************************************
[2025-07-27 07:02:10] 2025-07-27 11:01:40,205 | INFO     | 
[2025-07-27 07:02:10] 2025-07-27 11:01:40,206 | INFO     | architecture information:
[2025-07-27 07:02:10] 2025-07-27 11:01:40,206 | INFO     | executing command: cat /etc/os-release
[2025-07-27 07:02:10] 2025-07-27 11:01:40,220 | INFO     | cat /etc/os-release:
[2025-07-27 07:02:10] NAME="CentOS Linux"
[2025-07-27 07:02:10] VERSION="7 (Core)"
[2025-07-27 07:02:10] ID="centos"
[2025-07-27 07:02:10] ID_LIKE="rhel fedora"
[2025-07-27 07:02:10] VERSION_ID="7"
[2025-07-27 07:02:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 07:02:10] ANSI_COLOR="0;31"
[2025-07-27 07:02:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 07:02:10] HOME_URL="https://www.centos.org/"
[2025-07-27 07:02:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 07:02:10] 
[2025-07-27 07:02:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 07:02:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 07:02:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 07:02:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 07:02:10] 
[2025-07-27 07:02:10] 2025-07-27 11:01:40,220 | INFO     | ***************************************
[2025-07-27 07:02:10] 2025-07-27 11:01:40,723 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 07:02:10] 2025-07-27 11:01:40,740 | INFO     | sufficient remaining disk space (29370613760 B)
[2025-07-27 07:02:10] 2025-07-27 11:01:40,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 07:02:10] 2025-07-27 11:01:40,740 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 07:02:10] 2025-07-27 11:01:40,740 | INFO     | update_server=False
[2025-07-27 07:02:10] 2025-07-27 11:01:40,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 07:02:10] 2025-07-27 11:01:40,741 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 07:02:10] 2025-07-27 11:01:40,746 | INFO     | all payload control threads have been joined
[2025-07-27 07:02:10] 2025-07-27 11:01:41,009 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 07:02:10] 2025-07-27 11:01:41,009 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 07:02:10] 2025-07-27 11:01:41,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 07:02:10] 2025-07-27 11:01:41,010 | INFO     | will abort loop
[2025-07-27 07:02:10] 2025-07-27 11:01:41,160 | INFO     | all data control threads have been joined
[2025-07-27 07:02:10] 2025-07-27 11:01:41,355 | INFO     | all job control threads have been joined
[2025-07-27 07:02:10] 2025-07-27 11:01:41,601 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 07:02:10] 2025-07-27 11:01:41,746 | INFO     | [job] retrieve thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:41,746 | INFO     | [job] queue monitor thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:41,751 | INFO     | [payload] control thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:41,886 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:41,955 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:42,011 | INFO     | [job] job monitor thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:42,166 | INFO     | [data] control thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:42,315 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 07:02:10] 2025-07-27 11:01:42,361 | INFO     | [job] control thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:42,452 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:42,469 | INFO     | [payload] validate_post thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:42,478 | INFO     | [data] copytool_in thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:42,538 | INFO     | [payload] failed_post thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:42,672 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:43,241 | INFO     | [job] validate thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:43,607 | INFO     | [data] copytool_out thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:46,321 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 07:02:10] 2025-07-27 11:01:48,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140028637783872)>', '<ExcThread(monitor, started 140028072158976)>']
[2025-07-27 07:02:10] 2025-07-27 11:01:53,095 | INFO     | all workflow threads have been joined
[2025-07-27 07:02:10] 2025-07-27 11:01:53,096 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 07:02:10] 2025-07-27 11:01:53,096 | INFO     | traces error code: 0
[2025-07-27 07:02:10] 2025-07-27 11:01:53,096 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 07:02:10] 2025-07-27 11:02:10,620 | INFO     | PID=12420 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 07:02:10] 2025-07-27 11:02:10,621 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 07:02:10] 2025-07-27 11:02:10,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 07:02:10] 2025-07-27 11:02:10,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 07:02:10] 2025-07-27 11:02:10,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 07:02:10] 2025-07-27 11:02:10,622 | INFO     | [monitor] control thread has ended
[2025-07-27 07:02:10] 2025-07-27 11:02:10,717 [wrapper] ==== pilot stdout END ====
[2025-07-27 07:02:10] 2025-07-27 11:02:10,721 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 07:02:10] 2025-07-27 11:02:10,725 [wrapper] pilotpid: 12420
[2025-07-27 07:02:10] 2025-07-27 11:02:10,729 [wrapper] Pilot exit status: 0
[2025-07-27 07:02:10] 2025-07-27 11:02:10,744 [wrapper] pandaids: 6745940241
[2025-07-27 07:02:10] 2025-07-27 11:02:10,784 [wrapper] cleanup supervisor_pilot  9802 12421
[2025-07-27 07:02:10] 2025-07-27 11:02:10,788 [wrapper] Test setup, not cleaning
[2025-07-27 07:02:10] 2025-07-27 11:02:10,792 [wrapper] apfmon messages muted
[2025-07-27 07:02:10] 2025-07-27 11:02:10,795 [wrapper] ==== wrapper stdout END ====
[2025-07-27 07:02:10] 2025-07-27 11:02:10,799 [wrapper] ==== wrapper stderr END ====
[2025-07-27 07:02:10]  *** Error codes and diagnostics ***
[2025-07-27 07:02:10]     "exeErrorCode": 0,
[2025-07-27 07:02:10]     "exeErrorDiag": "",
[2025-07-27 07:02:10]     "pilotErrorCode": 0,
[2025-07-27 07:02:10]     "pilotErrorDiag": "",
[2025-07-27 07:02:10]  *** Listing of results directory ***
[2025-07-27 07:02:10] total 403996
[2025-07-27 07:02:10] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 21:40 pilot3.tar.gz
[2025-07-27 07:02:10] -rwx------ 1 boincer umatlas     36292 Jul 26 21:46 runpilot2-wrapper.sh
[2025-07-27 07:02:10] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 21:46 queuedata.json
[2025-07-27 07:02:10] -rw-r--r-- 1 boincer umatlas       100 Jul 27 05:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 07:02:10] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 05:29 run_atlas
[2025-07-27 07:02:10] -rw-r--r-- 1 boincer umatlas       105 Jul 27 05:29 job.xml
[2025-07-27 07:02:10] -rw-r--r-- 2 boincer umatlas 239940168 Jul 27 05:29 EVNT.45758390._000005.pool.root.1
[2025-07-27 07:02:10] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 05:29 start_atlas.sh
[2025-07-27 07:02:10] drwxrwx--x 2 boincer umatlas      4096 Jul 27 05:29 shared
[2025-07-27 07:02:10] -rw-r--r-- 2 boincer umatlas    542877 Jul 27 05:29 input.tar.gz
[2025-07-27 07:02:10] -rw-r--r-- 1 boincer umatlas         0 Jul 27 05:29 boinc_lockfile
[2025-07-27 07:02:10] -rw-r--r-- 1 boincer umatlas      2559 Jul 27 05:29 pandaJob.out
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas    980125 Jul 27 05:30 agis_schedconf.cvmfs.json
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas   1593052 Jul 27 05:30 agis_ddmendpoints.agis.ALL.json
[2025-07-27 07:02:10] drwx------ 4 boincer umatlas      4096 Jul 27 05:30 pilot3
[2025-07-27 07:02:10] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 06:56 init_data.xml
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas 168077049 Jul 27 07:00 HITS.45758392._000118.pool.root.1
[2025-07-27 07:02:10] -rw-r--r-- 1 boincer umatlas       529 Jul 27 07:01 boinc_task_state.xml
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas        95 Jul 27 07:01 pilot_heartbeat.json
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas      1050 Jul 27 07:01 memory_monitor_summary.json
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas    380726 Jul 27 07:01 log.45758392._000118.job.log.tgz.1
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas      7847 Jul 27 07:01 heartbeat.json
[2025-07-27 07:02:10] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 07:02 boinc_mmap_file
[2025-07-27 07:02:10] -rw-r--r-- 1 boincer umatlas        27 Jul 27 07:02 wrapper_checkpoint.txt
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas       745 Jul 27 07:02 pilotlog.txt
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas    518355 Jul 27 07:02 log.45758392._000118.job.log.1
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas       357 Jul 27 07:02 output.list
[2025-07-27 07:02:10] -rw-r--r-- 1 boincer umatlas       620 Jul 27 07:02 runtime_log
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas    921600 Jul 27 07:02 result.tar.gz
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas       659 Jul 27 07:02 x74LDm2d5z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGpTLDmtoHHvn.diag
[2025-07-27 07:02:10] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 07:02 runtime_log.err
[2025-07-27 07:02:10] -rw-r--r-- 1 boincer umatlas     22069 Jul 27 07:02 stderr.txt
[2025-07-27 07:02:10] HITS file was successfully produced:
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas 168077049 Jul 27 07:00 shared/HITS.pool.root.1
[2025-07-27 07:02:10]  *** Contents of shared directory: ***
[2025-07-27 07:02:10] total 399912
[2025-07-27 07:02:10] -rw-r--r-- 2 boincer umatlas 239940168 Jul 27 05:29 ATLAS.root_0
[2025-07-27 07:02:10] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 05:29 start_atlas.sh
[2025-07-27 07:02:10] -rw-r--r-- 2 boincer umatlas    542877 Jul 27 05:29 input.tar.gz
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas 168077049 Jul 27 07:00 HITS.pool.root.1
[2025-07-27 07:02:10] -rw------- 1 boincer umatlas    921600 Jul 27 07:02 result.tar.gz
07:02:12 (8665): run_atlas exited; CPU time 60316.720909
07:02:12 (8665): called boinc_finish(0)

</stderr_txt>
]]>

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