Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:35:36 (3236205): wrapper (7.7.26015): starting
05:35:36 (3236205): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 05:35:36] Arguments: --nthreads 8
[2025-07-27 05:35:36] Threads: 8
[2025-07-27 05:35:36] Checking for CVMFS
[2025-07-27 05:35:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 05:35:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 05:35:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 05:35:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 05:35:37] 2.13.1.0 704839 13949 152988 148807 1 196 32237876 40960000 10355 16776704 0 37731974 99.878 17290158 42286 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 05:35:37] CVMFS is ok
[2025-07-27 05:35:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 05:35:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 05:35:37] Further information can be found at the LHC@home message board.
[2025-07-27 05:35:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 05:35:37] Checking for apptainer binary...
[2025-07-27 05:35:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 05:35:37] Running /usr/bin/apptainer --version
[2025-07-27 05:35:37] apptainer version 1.4.1-1.el9
[2025-07-27 05:35:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 05:35:37] c-212-4.aglt2.org
[2025-07-27 05:35:37] apptainer works
[2025-07-27 05:35:37] Set ATHENA_PROC_NUMBER=8
[2025-07-27 05:35:37] Set ATHENA_CORE_NUMBER=8
[2025-07-27 05:35:37] Starting ATLAS job with PandaID=6745941077
[2025-07-27 05:35:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 07:10:29]  *** The last 200 lines of the pilot log: ***
[2025-07-27 07:10:29]  mtime=0
[2025-07-27 07:10:29]  protocol_id=None
[2025-07-27 07:10:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 07:10:29]  replicas=None
[2025-07-27 07:10:29]  scope=mc23_13p6TeV
[2025-07-27 07:10:29]  status=None
[2025-07-27 07:10:29]  status_code=0
[2025-07-27 07:10:29]  storage_token=
[2025-07-27 07:10:29]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6745941077/log.45759799._000122.job.log.tgz.1
[2025-07-27 07:10:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/10/log.45759799._000122.job.log.tgz.1
[2025-07-27 07:10:29]  workdir=None
[2025-07-27 07:10:29] ]
[2025-07-27 07:10:29] 2025-07-27 11:09:47,503 | INFO     | transferring file log.45759799._000122.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6745941077/log.45759799._000122.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 07:10:29] 2025-07-27 11:09:47,503 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6745941077/log.45759799._000122.job.log.tgz.1 /tmp/boinchome/slots/3/log.45759799._000122.job
[2025-07-27 07:10:29] 2025-07-27 11:09:47,532 | INFO     | adding to output.list: log.45759799._000122.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/10/log.45759799._000122.job.log.tg
[2025-07-27 07:10:29] 2025-07-27 11:09:47,533 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 07:10:29] 2025-07-27 11:09:47,533 | INFO     | summary of transferred files:
[2025-07-27 07:10:29] 2025-07-27 11:09:47,534 | INFO     |  -- lfn=log.45759799._000122.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 07:10:29] 2025-07-27 11:09:47,534 | INFO     | stage-out finished correctly
[2025-07-27 07:10:29] 2025-07-27 11:09:49,651 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 07:10:29] 2025-07-27 11:09:52,005 | INFO     | job 6745941077 has state=finished
[2025-07-27 07:10:29] 2025-07-27 11:09:52,005 | INFO     | preparing for final server update for job 6745941077 in state='finished'
[2025-07-27 07:10:29] 2025-07-27 11:09:52,005 | INFO     | this job has now completed (state=finished)
[2025-07-27 07:10:29] 2025-07-27 11:09:52,005 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 07:10:29] 2025-07-27 11:09:52,006 | INFO     | log transfer has been attempted: DONE
[2025-07-27 07:10:29] 2025-07-27 11:09:52,006 | INFO     | job 6745941077 has finished - writing final server update
[2025-07-27 07:10:29] 2025-07-27 11:09:52,006 | INFO     | total number of processed events: 400 (read)
[2025-07-27 07:10:29] 2025-07-27 11:09:52,008 | INFO     | executing command: lscpu
[2025-07-27 07:10:29] 2025-07-27 11:09:52,071 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 07:10:29] 2025-07-27 11:09:53,232 | WARNING  | process 3247807 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 07:10:29] 2025-07-27 11:09:53,232 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6745941077/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 07:10:29] 2025-07-27 11:09:53,594 | INFO     | number of running child processes to parent process 3247807: 1
[2025-07-27 07:10:29] 2025-07-27 11:09:53,595 | INFO     | maximum number of monitored processes: 6
[2025-07-27 07:10:29] 2025-07-27 11:09:56,099 | INFO     | monitor loop #410: job 0:6745941077 is in state 'finished'
[2025-07-27 07:10:29] 2025-07-27 11:09:56,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:10:29] 2025-07-27 11:09:57,423 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 07:10:29] 2025-07-27 11:09:57,429 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3278.0084791666645
[2025-07-27 07:10:29] 2025-07-27 11:09:57,445 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6745941077/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 07:10:29] 2025-07-27 11:09:57,445 | INFO     | extracted standard info from prmon json
[2025-07-27 07:10:29] 2025-07-27 11:09:57,445 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 07:10:29] 2025-07-27 11:09:57,446 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 07:10:29] 2025-07-27 11:09:57,447 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 07:10:29] 2025-07-27 11:09:57,447 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 07:10:29] 2025-07-27 11:09:57,449 | INFO     | fitting pss+swap vs Time
[2025-07-27 07:10:29] 2025-07-27 11:09:57,449 | INFO     | sum of square deviations: 190403570.0
[2025-07-27 07:10:29] 2025-07-27 11:09:57,449 | INFO     | sum of deviations: -3659652726.9999995
[2025-07-27 07:10:29] 2025-07-27 11:09:57,449 | INFO     | mean x: 1753611846.0
[2025-07-27 07:10:29] 2025-07-27 11:09:57,449 | INFO     | mean y: 2541635.682352941
[2025-07-27 07:10:29] 2025-07-27 11:09:57,449 | INFO     | -- intersect: 33707846501.09745
[2025-07-27 07:10:29] 2025-07-27 11:09:57,450 | INFO     | intersect: 33707846501.09745
[2025-07-27 07:10:29] 2025-07-27 11:09:57,450 | INFO     | chi2: 0.01513365353279077
[2025-07-27 07:10:29] 2025-07-27 11:09:57,450 | INFO     | -- intersect: 33707846501.09745
[2025-07-27 07:10:29] 2025-07-27 11:09:57,450 | INFO     | current memory leak: -19.22 B/s (using 85 data points, chi2=0.02)
[2025-07-27 07:10:29] 2025-07-27 11:09:57,450 | INFO     | could have reported an average CPU frequency of 3285 MHz (7 samples)
[2025-07-27 07:10:29] 2025-07-27 11:09:57,450 | INFO     | ..............................
[2025-07-27 07:10:29] 2025-07-27 11:09:57,450 | INFO     | . Timing measurements:
[2025-07-27 07:10:29] 2025-07-27 11:09:57,451 | INFO     | . get job = 0 s
[2025-07-27 07:10:29] 2025-07-27 11:09:57,451 | INFO     | . initial setup = 2 s
[2025-07-27 07:10:29] 2025-07-27 11:09:57,452 | INFO     | . payload setup = 7 s
[2025-07-27 07:10:29] 2025-07-27 11:09:57,452 | INFO     | . stage-in = 0 s
[2025-07-27 07:10:29] 2025-07-27 11:09:57,452 | INFO     | . payload execution = 5609 s
[2025-07-27 07:10:29] 2025-07-27 11:09:57,452 | INFO     | . stage-out = 0 s
[2025-07-27 07:10:29] 2025-07-27 11:09:57,452 | INFO     | . log creation = 0 s
[2025-07-27 07:10:29] 2025-07-27 11:09:57,452 | INFO     | ..............................
[2025-07-27 07:10:29] 2025-07-27 11:09:57,533 | INFO     | 
[2025-07-27 07:10:29] 2025-07-27 11:09:57,534 | INFO     | job summary report
[2025-07-27 07:10:29] 2025-07-27 11:09:57,534 | INFO     | --------------------------------------------------
[2025-07-27 07:10:29] 2025-07-27 11:09:57,534 | INFO     | PanDA job id: 6745941077
[2025-07-27 07:10:29] 2025-07-27 11:09:57,534 | INFO     | task id: 45759799
[2025-07-27 07:10:29] 2025-07-27 11:09:57,534 | INFO     | errors: (none)
[2025-07-27 07:10:29] 2025-07-27 11:09:57,534 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 07:10:29] 2025-07-27 11:09:57,534 | INFO     | pilot state: finished 
[2025-07-27 07:10:29] 2025-07-27 11:09:57,534 | INFO     | transexitcode: 0
[2025-07-27 07:10:29] 2025-07-27 11:09:57,534 | INFO     | exeerrorcode: 0
[2025-07-27 07:10:29] 2025-07-27 11:09:57,534 | INFO     | exeerrordiag: 
[2025-07-27 07:10:29] 2025-07-27 11:09:57,535 | INFO     | exitcode: 0
[2025-07-27 07:10:29] 2025-07-27 11:09:57,535 | INFO     | exitmsg: OK
[2025-07-27 07:10:29] 2025-07-27 11:09:57,535 | INFO     | cpuconsumptiontime: 40564 s
[2025-07-27 07:10:29] 2025-07-27 11:09:57,535 | INFO     | nevents: 400
[2025-07-27 07:10:29] 2025-07-27 11:09:57,535 | INFO     | neventsw: 0
[2025-07-27 07:10:29] 2025-07-27 11:09:57,535 | INFO     | pid: 3247807
[2025-07-27 07:10:29] 2025-07-27 11:09:57,535 | INFO     | pgrp: 3247807
[2025-07-27 07:10:29] 2025-07-27 11:09:57,535 | INFO     | corecount: 8
[2025-07-27 07:10:29] 2025-07-27 11:09:57,535 | INFO     | event service: False
[2025-07-27 07:10:29] 2025-07-27 11:09:57,535 | INFO     | sizes: {0: 2397246, 1: 2397501, 6: 2397763, 12: 2397791, 5620: 2424271, 5621: 2424270, 5622: 2433452, 5624: 2433508, 5631: 2433702}
[2025-07-27 07:10:29] 2025-07-27 11:09:57,535 | INFO     | --------------------------------------------------
[2025-07-27 07:10:29] 2025-07-27 11:09:57,535 | INFO     | 
[2025-07-27 07:10:29] 2025-07-27 11:09:57,535 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-07-27 07:10:29] 2025-07-27 11:09:57,577 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,578 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,579 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 07:10:29] 2025-07-27 11:09:57,579 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,579 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 07:10:29] 2025-07-27 11:09:57,579 | INFO     | job 6745941077 has completed (purged errors)
[2025-07-27 07:10:29] 2025-07-27 11:09:57,579 | INFO     | overall cleanup function is called
[2025-07-27 07:10:29] 2025-07-27 11:09:58,589 | INFO     | --- collectZombieJob: --- 10, [3247807]
[2025-07-27 07:10:29] 2025-07-27 11:09:58,589 | INFO     | zombie collector waiting for pid 3247807
[2025-07-27 07:10:29] 2025-07-27 11:09:58,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 07:10:29] 2025-07-27 11:09:58,589 | INFO     | collected zombie processes
[2025-07-27 07:10:29] 2025-07-27 11:09:58,589 | INFO     | will attempt to kill all subprocesses of pid=3247807
[2025-07-27 07:10:29] 2025-07-27 11:09:58,953 | INFO     | process IDs to be killed: [3247807] (in reverse order)
[2025-07-27 07:10:29] 2025-07-27 11:09:59,086 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 07:10:29] 2025-07-27 11:09:59,086 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 07:10:29] 2025-07-27 11:09:59,102 | INFO     | did not find any defunct processes belonging to 3247807
[2025-07-27 07:10:29] 2025-07-27 11:09:59,114 | INFO     | did not find any defunct processes belonging to 3247807
[2025-07-27 07:10:29] 2025-07-27 11:09:59,114 | INFO     | ready for new job
[2025-07-27 07:10:29] 2025-07-27 11:09:59,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 07:10:29] 2025-07-27 11:09:59,116 | INFO     | ***************************************
[2025-07-27 07:10:29] 2025-07-27 11:09:59,116 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 07:10:29] 2025-07-27 11:09:59,116 | INFO     | ***************************************
[2025-07-27 07:10:29] 2025-07-27 11:09:59,116 | INFO     | 
[2025-07-27 07:10:29] 2025-07-27 11:09:59,121 | INFO     | architecture information:
[2025-07-27 07:10:29] 2025-07-27 11:09:59,121 | INFO     | executing command: cat /etc/os-release
[2025-07-27 07:10:29] 2025-07-27 11:09:59,147 | INFO     | cat /etc/os-release:
[2025-07-27 07:10:29] NAME="CentOS Linux"
[2025-07-27 07:10:29] VERSION="7 (Core)"
[2025-07-27 07:10:29] ID="centos"
[2025-07-27 07:10:29] ID_LIKE="rhel fedora"
[2025-07-27 07:10:29] VERSION_ID="7"
[2025-07-27 07:10:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 07:10:29] ANSI_COLOR="0;31"
[2025-07-27 07:10:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 07:10:29] HOME_URL="https://www.centos.org/"
[2025-07-27 07:10:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 07:10:29] 
[2025-07-27 07:10:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 07:10:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 07:10:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 07:10:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 07:10:29] 
[2025-07-27 07:10:29] 2025-07-27 11:09:59,148 | INFO     | ***************************************
[2025-07-27 07:10:29] 2025-07-27 11:09:59,651 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-07-27 07:10:29] 2025-07-27 11:09:59,677 | INFO     | sufficient remaining disk space (123477164032 B)
[2025-07-27 07:10:29] 2025-07-27 11:09:59,677 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 07:10:29] 2025-07-27 11:09:59,678 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 07:10:29] 2025-07-27 11:09:59,678 | INFO     | update_server=False
[2025-07-27 07:10:29] 2025-07-27 11:09:59,678 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 07:10:29] 2025-07-27 11:09:59,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 07:10:29] 2025-07-27 11:09:59,678 | INFO     | aborting loop
[2025-07-27 07:10:29] 2025-07-27 11:09:59,792 | INFO     | all data control threads have been joined
[2025-07-27 07:10:29] 2025-07-27 11:09:59,934 | INFO     | all payload control threads have been joined
[2025-07-27 07:10:29] 2025-07-27 11:10:00,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 07:10:29] 2025-07-27 11:10:00,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 07:10:29] 2025-07-27 11:10:00,677 | INFO     | all job control threads have been joined
[2025-07-27 07:10:29] 2025-07-27 11:10:00,683 | INFO     | [job] job monitor thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:00,683 | INFO     | [job] retrieve thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:00,766 | INFO     | [payload] validate_post thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:00,786 | INFO     | [data] copytool_in thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:00,787 | INFO     | [job] validate thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:00,797 | INFO     | [data] control thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:00,942 | INFO     | [payload] control thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:01,036 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:01,121 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:01,378 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:01,596 | INFO     | [payload] failed_post thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:01,684 | INFO     | [job] control thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:02,544 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 07:10:29] 2025-07-27 11:10:02,621 | INFO     | [data] copytool_out thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:03,549 | INFO     | [job] queue monitor thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:04,251 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:09,856 | INFO     | job.realtimelogging is not enabled
[2025-07-27 07:10:29] 2025-07-27 11:10:10,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 07:10:29] 2025-07-27 11:10:12,452 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139834385561408)>', '<ExcThread(monitor, started 139833448060672)>']
[2025-07-27 07:10:29] 2025-07-27 11:10:17,478 | INFO     | all workflow threads have been joined
[2025-07-27 07:10:29] 2025-07-27 11:10:17,479 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 07:10:29] 2025-07-27 11:10:17,479 | INFO     | traces error code: 0
[2025-07-27 07:10:29] 2025-07-27 11:10:17,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 07:10:29] 2025-07-27 11:10:29,053 | INFO     | PID=3240666 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 07:10:29] 2025-07-27 11:10:29,053 | INFO     | .. there are 14 such processes running
[2025-07-27 07:10:29] 2025-07-27 11:10:29,054 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 07:10:29] 2025-07-27 11:10:29,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 07:10:29] 2025-07-27 11:10:29,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 07:10:29] 2025-07-27 11:10:29,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 07:10:29] 2025-07-27 11:10:29,054 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 07:10:29] 2025-07-27 11:10:29,054 | INFO     | [monitor] control thread has ended
[2025-07-27 07:10:29] 2025-07-27 11:10:29,169 [wrapper] ==== pilot stdout END ====
[2025-07-27 07:10:29] 2025-07-27 11:10:29,174 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 07:10:29] 2025-07-27 11:10:29,178 [wrapper] pilotpid: 3240666
[2025-07-27 07:10:29] 2025-07-27 11:10:29,185 [wrapper] Pilot exit status: 0
[2025-07-27 07:10:29] 2025-07-27 11:10:29,197 [wrapper] pandaids: 6745941077
[2025-07-27 07:10:29] 2025-07-27 11:10:29,274 [wrapper] cleanup supervisor_pilot 3519069 3240667
[2025-07-27 07:10:29] 2025-07-27 11:10:29,282 [wrapper] Test setup, not cleaning
[2025-07-27 07:10:29] 2025-07-27 11:10:29,287 [wrapper] apfmon messages muted
[2025-07-27 07:10:29] 2025-07-27 11:10:29,293 [wrapper] ==== wrapper stdout END ====
[2025-07-27 07:10:29] 2025-07-27 11:10:29,296 [wrapper] ==== wrapper stderr END ====
[2025-07-27 07:10:29]  *** Error codes and diagnostics ***
[2025-07-27 07:10:29]     "exeErrorCode": 0,
[2025-07-27 07:10:29]     "exeErrorDiag": "",
[2025-07-27 07:10:29]     "pilotErrorCode": 0,
[2025-07-27 07:10:29]     "pilotErrorDiag": "",
[2025-07-27 07:10:29]  *** Listing of results directory ***
[2025-07-27 07:10:29] total 401796
[2025-07-27 07:10:29] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 21:40 pilot3.tar.gz
[2025-07-27 07:10:29] -rwx------. 1 boincer umatlas     36292 Jul 26 21:46 runpilot2-wrapper.sh
[2025-07-27 07:10:29] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:46 queuedata.json
[2025-07-27 07:10:29] -rw-r--r--. 1 boincer umatlas       100 Jul 27 05:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 07:10:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 05:35 run_atlas
[2025-07-27 07:10:29] -rw-r--r--. 1 boincer umatlas       105 Jul 27 05:35 job.xml
[2025-07-27 07:10:29] -rw-r--r--. 2 boincer umatlas 240496695 Jul 27 05:35 EVNT.45759797._000005.pool.root.1
[2025-07-27 07:10:29] -rw-r--r--. 2 boincer umatlas    542878 Jul 27 05:35 input.tar.gz
[2025-07-27 07:10:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 05:35 start_atlas.sh
[2025-07-27 07:10:29] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 05:35 shared
[2025-07-27 07:10:29] -rw-r--r--. 1 boincer umatlas         0 Jul 27 05:35 boinc_lockfile
[2025-07-27 07:10:29] -rw-r--r--. 1 boincer umatlas      2564 Jul 27 05:35 pandaJob.out
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas    980125 Jul 27 05:35 agis_schedconf.cvmfs.json
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas   1593052 Jul 27 05:35 agis_ddmendpoints.agis.ALL.json
[2025-07-27 07:10:29] drwx------. 4 boincer umatlas      4096 Jul 27 05:35 pilot3
[2025-07-27 07:10:29] -rw-r--r--. 1 boincer umatlas      6945 Jul 27 07:03 init_data.xml
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas 165321737 Jul 27 07:09 HITS.45759799._000122.pool.root.1
[2025-07-27 07:10:29] -rw-r--r--. 1 boincer umatlas       529 Jul 27 07:09 boinc_task_state.xml
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas      1037 Jul 27 07:09 memory_monitor_summary.json
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas    326618 Jul 27 07:09 log.45759799._000122.job.log.tgz.1
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas        95 Jul 27 07:09 pilot_heartbeat.json
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas      7755 Jul 27 07:09 heartbeat.json
[2025-07-27 07:10:29] -rw-r--r--. 1 boincer umatlas        27 Jul 27 07:10 wrapper_checkpoint.txt
[2025-07-27 07:10:29] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 07:10 boinc_mmap_file
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas       893 Jul 27 07:10 pilotlog.txt
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas    541292 Jul 27 07:10 log.45759799._000122.job.log.1
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas       357 Jul 27 07:10 output.list
[2025-07-27 07:10:29] -rw-r--r--. 1 boincer umatlas       620 Jul 27 07:10 runtime_log
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas    890880 Jul 27 07:10 result.tar.gz
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas       651 Jul 27 07:10 XRgMDm2d5z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfpTLDm6a0WRm.diag
[2025-07-27 07:10:29] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 07:10 runtime_log.err
[2025-07-27 07:10:29] -rw-r--r--. 1 boincer umatlas     21722 Jul 27 07:10 stderr.txt
[2025-07-27 07:10:29] HITS file was successfully produced:
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas 165321737 Jul 27 07:09 shared/HITS.pool.root.1
[2025-07-27 07:10:29]  *** Contents of shared directory: ***
[2025-07-27 07:10:29] total 397740
[2025-07-27 07:10:29] -rw-r--r--. 2 boincer umatlas 240496695 Jul 27 05:35 ATLAS.root_0
[2025-07-27 07:10:29] -rw-r--r--. 2 boincer umatlas    542878 Jul 27 05:35 input.tar.gz
[2025-07-27 07:10:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 05:35 start_atlas.sh
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas 165321737 Jul 27 07:09 HITS.pool.root.1
[2025-07-27 07:10:29] -rw-------. 1 boincer umatlas    890880 Jul 27 07:10 result.tar.gz
07:10:31 (3236205): run_atlas exited; CPU time 40698.978455
07:10:31 (3236205): called boinc_finish(0)

</stderr_txt>
]]>

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