Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:25:22 (2821494): wrapper (7.7.26015): starting
22:25:22 (2821494): wrapper: running run_atlas (--nthreads 3)
[2025-07-27 22:25:22] Arguments: --nthreads 3
[2025-07-27 22:25:22] Threads: 3
[2025-07-27 22:25:22] Checking for CVMFS
[2025-07-27 22:25:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:25:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:25:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:25:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:25:22] 2.9.2.0 3849249 8594 86412 148823 1 56 35464659 36864001 0 130560 0 5772439 99.986 319042 2781 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 22:25:22] CVMFS is ok
[2025-07-27 22:25:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:25:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:25:22] Further information can be found at the LHC@home message board.
[2025-07-27 22:25:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:25:22] Checking for apptainer binary...
[2025-07-27 22:25:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:25:22] Running /usr/bin/apptainer --version
[2025-07-27 22:25:22] apptainer version 1.3.6-6.1
[2025-07-27 22:25:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:25:22] atlasA223b
[2025-07-27 22:25:22] apptainer works
[2025-07-27 22:25:22] Set ATHENA_PROC_NUMBER=3
[2025-07-27 22:25:22] Set ATHENA_CORE_NUMBER=3
[2025-07-27 22:25:22] Starting ATLAS job with PandaID=6746013693
[2025-07-27 22:25:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:33:53]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:33:53] 2025-07-27 22:33:19,623 | INFO     | executing command: lscpu
[2025-07-28 00:33:53] 2025-07-27 22:33:19,639 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 00:33:53] 2025-07-27 22:33:20,848 | INFO     | monitor loop #588: job 0:6746013693 is in state 'finished'
[2025-07-28 00:33:53] 2025-07-27 22:33:20,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:33:53] 2025-07-27 22:33:22,126 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 00:33:53] 2025-07-27 22:33:22,128 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3656.9707500000004
[2025-07-28 00:33:53] 2025-07-27 22:33:22,129 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6746013693/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:33:53] 2025-07-27 22:33:22,129 | INFO     | extracted standard info from prmon json
[2025-07-28 00:33:53] 2025-07-27 22:33:22,129 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:33:53] 2025-07-27 22:33:22,129 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:33:53] 2025-07-27 22:33:22,129 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:33:53] 2025-07-27 22:33:22,129 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:33:53] 2025-07-27 22:33:22,130 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:33:53] 2025-07-27 22:33:22,130 | INFO     | sum of square deviations: 620244187.5
[2025-07-28 00:33:53] 2025-07-27 22:33:22,130 | INFO     | sum of deviations: -23264877169.0
[2025-07-28 00:33:53] 2025-07-27 22:33:22,130 | INFO     | mean x: 1753651761.5
[2025-07-28 00:33:53] 2025-07-27 22:33:22,131 | INFO     | mean y: 2442245.396825397
[2025-07-28 00:33:53] 2025-07-27 22:33:22,131 | INFO     | -- intersect: 65780556173.30523
[2025-07-28 00:33:53] 2025-07-27 22:33:22,131 | INFO     | intersect: 65780556173.30523
[2025-07-28 00:33:53] 2025-07-27 22:33:22,131 | INFO     | chi2: 1.7533195950197917
[2025-07-28 00:33:53] 2025-07-27 22:33:22,131 | INFO     | sum of square deviations: 549294020.0
[2025-07-28 00:33:53] 2025-07-27 22:33:22,131 | INFO     | sum of deviations: -21336600618.000004
[2025-07-28 00:33:53] 2025-07-27 22:33:22,131 | INFO     | mean x: 1753651609.0
[2025-07-28 00:33:53] 2025-07-27 22:33:22,131 | INFO     | mean y: 2446392.5454545454
[2025-07-28 00:33:53] 2025-07-27 22:33:22,131 | INFO     | -- intersect: 68120726661.36415
[2025-07-28 00:33:53] 2025-07-27 22:33:22,131 | INFO     | intersect: 68120726661.36415
[2025-07-28 00:33:53] 2025-07-27 22:33:22,131 | INFO     | chi2: 1.747765968291791
[2025-07-28 00:33:53] 2025-07-27 22:33:22,131 | INFO     | current chi2=1.747765968291791 (change=0.3167492534604371 %)
[2025-07-28 00:33:53] 2025-07-27 22:33:22,131 | INFO     | right removable region: 120
[2025-07-28 00:33:53] 2025-07-27 22:33:22,131 | INFO     | sum of square deviations: 549294020.0
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | sum of deviations: -39170602341.99999
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | mean x: 1753651914.0
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | mean y: 2475589.4545454546
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | -- intersect: 125056816740.99515
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | intersect: 125056816740.99515
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | chi2: 0.23284685870634123
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | current chi2=0.23284685870634123 (change=86.7196568516242 %)
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | sum of square deviations: 483971865.0
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | sum of deviations: -34630940648.5
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | mean x: 1753652066.5
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | mean y: 2464974.077586207
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | -- intersect: 125486248278.46632
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | intersect: 125486248278.46632
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | chi2: 0.23269377089904272
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | current chi2=0.23269377089904272 (change=0.06574613381045064 %)
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | left removable region: 20
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | sum of square deviations: 310052325.0
[2025-07-28 00:33:53] 2025-07-27 22:33:22,132 | INFO     | sum of deviations: -22950457518.5
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | mean x: 1753652188.5
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | mean y: 2444669.05
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | -- intersect: 129809953947.988
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | intersect: 129809953947.988
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | chi2: 0.2131524493381273
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | -- intersect: 129809953947.988
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | current memory leak: -74.02 B/s (using 100 data points, chi2=0.21)
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | could have reported an average CPU frequency of 4001 MHz (8 samples)
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | ..............................
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | . Timing measurements:
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | . get job = 0 s
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | . initial setup = 1 s
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | . payload setup = 3 s
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | . stage-in = 0 s
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | . payload execution = 7646 s
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | . stage-out = 0 s
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | . log creation = 0 s
[2025-07-28 00:33:53] 2025-07-27 22:33:22,133 | INFO     | ..............................
[2025-07-28 00:33:53] 2025-07-27 22:33:22,164 | INFO     | 
[2025-07-28 00:33:53] 2025-07-27 22:33:22,164 | INFO     | job summary report
[2025-07-28 00:33:53] 2025-07-27 22:33:22,164 | INFO     | --------------------------------------------------
[2025-07-28 00:33:53] 2025-07-27 22:33:22,164 | INFO     | PanDA job id: 6746013693
[2025-07-28 00:33:53] 2025-07-27 22:33:22,164 | INFO     | task id: 45758475
[2025-07-28 00:33:53] 2025-07-27 22:33:22,164 | INFO     | errors: (none)
[2025-07-28 00:33:53] 2025-07-27 22:33:22,164 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | pilot state: finished 
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | transexitcode: 0
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | exeerrorcode: 0
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | exeerrordiag: 
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | exitcode: 0
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | exitmsg: OK
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | cpuconsumptiontime: 22296 s
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | nevents: 400
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | neventsw: 0
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | pid: 2831650
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | pgrp: 2831650
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | corecount: 3
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | event service: False
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | sizes: {0: 2397473, 2: 2397735, 10: 2397763, 7653: 2434522, 7657: 2434522, 7660: 2434716}
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | --------------------------------------------------
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | 
[2025-07-28 00:33:53] 2025-07-27 22:33:22,165 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | job 6746013693 has completed (purged errors)
[2025-07-28 00:33:53] 2025-07-27 22:33:22,178 | INFO     | overall cleanup function is called
[2025-07-28 00:33:53] 2025-07-27 22:33:23,185 | INFO     | --- collectZombieJob: --- 10, [2831650]
[2025-07-28 00:33:53] 2025-07-27 22:33:23,185 | INFO     | zombie collector waiting for pid 2831650
[2025-07-28 00:33:53] 2025-07-27 22:33:23,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:33:53] 2025-07-27 22:33:23,186 | INFO     | collected zombie processes
[2025-07-28 00:33:53] 2025-07-27 22:33:23,186 | INFO     | will attempt to kill all subprocesses of pid=2831650
[2025-07-28 00:33:53] 2025-07-27 22:33:23,246 | INFO     | process IDs to be killed: [2831650] (in reverse order)
[2025-07-28 00:33:53] 2025-07-27 22:33:23,278 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:33:53] 2025-07-27 22:33:23,278 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:33:53] 2025-07-27 22:33:23,280 | INFO     | did not find any defunct processes belonging to 2831650
[2025-07-28 00:33:53] 2025-07-27 22:33:23,281 | INFO     | did not find any defunct processes belonging to 2831650
[2025-07-28 00:33:53] 2025-07-27 22:33:23,281 | INFO     | ready for new job
[2025-07-28 00:33:53] 2025-07-27 22:33:23,282 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:33:53] 2025-07-27 22:33:23,282 | INFO     | ***************************************
[2025-07-28 00:33:53] 2025-07-27 22:33:23,282 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:33:53] 2025-07-27 22:33:23,282 | INFO     | ***************************************
[2025-07-28 00:33:53] 2025-07-27 22:33:23,282 | INFO     | 
[2025-07-28 00:33:53] 2025-07-27 22:33:23,283 | INFO     | architecture information:
[2025-07-28 00:33:53] 2025-07-27 22:33:23,283 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:33:53] 2025-07-27 22:33:23,293 | INFO     | cat /etc/os-release:
[2025-07-28 00:33:53] NAME="CentOS Linux"
[2025-07-28 00:33:53] VERSION="7 (Core)"
[2025-07-28 00:33:53] ID="centos"
[2025-07-28 00:33:53] ID_LIKE="rhel fedora"
[2025-07-28 00:33:53] VERSION_ID="7"
[2025-07-28 00:33:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:33:53] ANSI_COLOR="0;31"
[2025-07-28 00:33:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:33:53] HOME_URL="https://www.centos.org/"
[2025-07-28 00:33:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:33:53] 
[2025-07-28 00:33:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:33:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:33:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:33:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:33:53] 
[2025-07-28 00:33:53] 2025-07-27 22:33:23,293 | INFO     | ***************************************
[2025-07-28 00:33:53] 2025-07-27 22:33:23,796 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 00:33:53] 2025-07-27 22:33:23,809 | INFO     | sufficient remaining disk space (364979945472 B)
[2025-07-28 00:33:53] 2025-07-27 22:33:23,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:33:53] 2025-07-27 22:33:23,810 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:33:53] 2025-07-27 22:33:23,810 | INFO     | update_server=False
[2025-07-28 00:33:53] 2025-07-27 22:33:23,810 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:33:53] 2025-07-27 22:33:23,810 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:33:53] 2025-07-27 22:33:23,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:33:53] 2025-07-27 22:33:24,135 | INFO     | all job control threads have been joined
[2025-07-28 00:33:53] 2025-07-27 22:33:24,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:33:53] 2025-07-27 22:33:24,357 | INFO     | aborting loop
[2025-07-28 00:33:53] 2025-07-27 22:33:24,456 | INFO     | all payload control threads have been joined
[2025-07-28 00:33:53] 2025-07-27 22:33:24,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:33:53] 2025-07-27 22:33:24,509 | INFO     | all data control threads have been joined
[2025-07-28 00:33:53] 2025-07-27 22:33:24,811 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:24,816 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:25,056 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:25,058 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:25,141 | INFO     | [job] control thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:25,306 | INFO     | [job] validate thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:25,363 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:25,385 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:25,461 | INFO     | [payload] control thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:25,500 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:25,515 | INFO     | [data] control thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:25,561 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:25,816 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:25,927 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:28,496 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:34,450 | INFO     | job.realtimelogging is not enabled
[2025-07-28 00:33:53] 2025-07-27 22:33:35,456 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:33:53] 2025-07-27 22:33:36,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139677139322688)>', '<ExcThread(monitor, started 139675750622976)>']
[2025-07-28 00:33:53] 2025-07-27 22:33:41,377 | INFO     | all workflow threads have been joined
[2025-07-28 00:33:53] 2025-07-27 22:33:41,377 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:33:53] 2025-07-27 22:33:41,377 | INFO     | traces error code: 0
[2025-07-28 00:33:53] 2025-07-27 22:33:41,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:33:53] 2025-07-27 22:33:53,655 | INFO     | PID=2825138 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:33:53] 2025-07-27 22:33:53,655 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:33:53] 2025-07-27 22:33:53,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:33:53] 2025-07-27 22:33:53,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:33:53] 2025-07-27 22:33:53,655 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:33:53] 2025-07-27 22:33:53,655 | INFO     | [monitor] control thread has ended
[2025-07-28 00:33:53] 2025-07-27 22:33:53,710 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:33:53] 2025-07-27 22:33:53,713 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:33:53] 2025-07-27 22:33:53,717 [wrapper] pilotpid: 2825138
[2025-07-28 00:33:53] 2025-07-27 22:33:53,720 [wrapper] Pilot exit status: 0
[2025-07-28 00:33:53] 2025-07-27 22:33:53,728 [wrapper] pandaids: 6746013693
[2025-07-28 00:33:53] 2025-07-27 22:33:53,749 [wrapper] cleanup supervisor_pilot 2851925 2825139
[2025-07-28 00:33:53] 2025-07-27 22:33:53,751 [wrapper] Test setup, not cleaning
[2025-07-28 00:33:53] 2025-07-27 22:33:53,754 [wrapper] apfmon messages muted
[2025-07-28 00:33:53] 2025-07-27 22:33:53,756 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:33:53] 2025-07-27 22:33:53,759 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:33:53]  *** Error codes and diagnostics ***
[2025-07-28 00:33:53]     "exeErrorCode": 0,
[2025-07-28 00:33:53]     "exeErrorDiag": "",
[2025-07-28 00:33:53]     "pilotErrorCode": 0,
[2025-07-28 00:33:53]     "pilotErrorDiag": "",
[2025-07-28 00:33:53]  *** Listing of results directory ***
[2025-07-28 00:33:53] total 381172
[2025-07-28 00:33:53] -rw-r--r-- 1 boinc boinc    530466 Jul 27 06:20 pilot3.tar.gz
[2025-07-28 00:33:53] -rwx------ 1 boinc boinc     36292 Jul 27 06:27 runpilot2-wrapper.sh
[2025-07-28 00:33:53] -rw-r--r-- 1 boinc boinc      5112 Jul 27 06:27 queuedata.json
[2025-07-28 00:33:53] -rw-r--r-- 1 boinc boinc       100 Jul 27 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:33:53] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 22:25 run_atlas
[2025-07-28 00:33:53] -rw-r--r-- 1 boinc boinc       105 Jul 27 22:25 job.xml
[2025-07-28 00:33:53] -rw-r--r-- 2 boinc boinc 224008518 Jul 27 22:25 EVNT.45758473._000002.pool.root.1
[2025-07-28 00:33:53] -rw-r--r-- 1 boinc boinc      6932 Jul 27 22:25 init_data.xml
[2025-07-28 00:33:53] drwxrwx--x 2 boinc boinc      4096 Jul 27 22:25 shared
[2025-07-28 00:33:53] -rw-r--r-- 2 boinc boinc    542886 Jul 27 22:25 input.tar.gz
[2025-07-28 00:33:53] -rw-r--r-- 2 boinc boinc     15095 Jul 27 22:25 start_atlas.sh
[2025-07-28 00:33:53] -rw-r--r-- 1 boinc boinc         0 Jul 27 22:25 boinc_lockfile
[2025-07-28 00:33:53] -rw-r--r-- 1 boinc boinc      2561 Jul 27 22:25 pandaJob.out
[2025-07-28 00:33:53] -rw------- 1 boinc boinc    980109 Jul 27 22:25 agis_schedconf.cvmfs.json
[2025-07-28 00:33:53] -rw------- 1 boinc boinc   1593052 Jul 27 22:25 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:33:53] drwx------ 4 boinc boinc      4096 Jul 27 22:25 pilot3
[2025-07-28 00:33:53] -rw------- 1 boinc boinc 160505746 Jul 28 00:32 HITS.45758475._000029.pool.root.1
[2025-07-28 00:33:53] -rw-r--r-- 1 boinc boinc       529 Jul 28 00:33 boinc_task_state.xml
[2025-07-28 00:33:53] -rw------- 1 boinc boinc      1017 Jul 28 00:33 memory_monitor_summary.json
[2025-07-28 00:33:53] -rw------- 1 boinc boinc        95 Jul 28 00:33 pilot_heartbeat.json
[2025-07-28 00:33:53] -rw------- 1 boinc boinc    243397 Jul 28 00:33 log.45758475._000029.job.log.tgz.1
[2025-07-28 00:33:53] -rw------- 1 boinc boinc      7764 Jul 28 00:33 heartbeat.json
[2025-07-28 00:33:53] -rw-r--r-- 1 boinc boinc      8192 Jul 28 00:33 boinc_mmap_file
[2025-07-28 00:33:53] -rw-r--r-- 1 boinc boinc        27 Jul 28 00:33 wrapper_checkpoint.txt
[2025-07-28 00:33:53] -rw------- 1 boinc boinc       747 Jul 28 00:33 pilotlog.txt
[2025-07-28 00:33:53] -rw------- 1 boinc boinc    722549 Jul 28 00:33 log.45758475._000029.job.log.1
[2025-07-28 00:33:53] -rw------- 1 boinc boinc       357 Jul 28 00:33 output.list
[2025-07-28 00:33:53] -rw-r--r-- 1 boinc boinc       620 Jul 28 00:33 runtime_log
[2025-07-28 00:33:53] -rw------- 1 boinc boinc    983040 Jul 28 00:33 result.tar.gz
[2025-07-28 00:33:53] -rw------- 1 boinc boinc       663 Jul 28 00:33 u01KDm597z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsCULDmfIrU9m.diag
[2025-07-28 00:33:53] -rw-r--r-- 1 boinc boinc      8754 Jul 28 00:33 runtime_log.err
[2025-07-28 00:33:53] -rw-r--r-- 1 boinc boinc     21160 Jul 28 00:33 stderr.txt
[2025-07-28 00:33:53] HITS file was successfully produced:
[2025-07-28 00:33:53] -rw------- 1 boinc boinc 160505746 Jul 28 00:32 shared/HITS.pool.root.1
[2025-07-28 00:33:53]  *** Contents of shared directory: ***
[2025-07-28 00:33:53] total 377020
[2025-07-28 00:33:53] -rw-r--r-- 2 boinc boinc 224008518 Jul 27 22:25 ATLAS.root_0
[2025-07-28 00:33:53] -rw-r--r-- 2 boinc boinc    542886 Jul 27 22:25 input.tar.gz
[2025-07-28 00:33:53] -rw-r--r-- 2 boinc boinc     15095 Jul 27 22:25 start_atlas.sh
[2025-07-28 00:33:53] -rw------- 1 boinc boinc 160505746 Jul 28 00:32 HITS.pool.root.1
[2025-07-28 00:33:53] -rw------- 1 boinc boinc    983040 Jul 28 00:33 result.tar.gz
00:34:16 (2821494): run_atlas exited; CPU time 22334.216784
00:34:16 (2821494): called boinc_finish(0)

</stderr_txt>
]]>

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