Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:01:32 (1415180): wrapper (7.7.26015): starting
23:01:32 (1415180): wrapper: running run_atlas (--nthreads 3)
[2025-07-27 23:01:32] Arguments: --nthreads 3
[2025-07-27 23:01:32] Threads: 3
[2025-07-27 23:01:32] Checking for CVMFS
[2025-07-27 23:01:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:01:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:01:32] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:01:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:01:32] 2.9.2.0 2944 5141 84276 148823 2 57 18547236 36864000 0 130560 0 3764043 99.990 192200 1790 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 23:01:32] CVMFS is ok
[2025-07-27 23:01:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:01:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:01:32] Further information can be found at the LHC@home message board.
[2025-07-27 23:01:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:01:32] Checking for apptainer binary...
[2025-07-27 23:01:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:01:32] Running /usr/bin/apptainer --version
[2025-07-27 23:01:32] apptainer version 1.4.1-1.1
[2025-07-27 23:01:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:01:32] thA312a
[2025-07-27 23:01:32] apptainer works
[2025-07-27 23:01:32] Set ATHENA_PROC_NUMBER=3
[2025-07-27 23:01:32] Set ATHENA_CORE_NUMBER=3
[2025-07-27 23:01:32] Starting ATLAS job with PandaID=6745983075
[2025-07-27 23:01:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:43:11]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:43:11] 2025-07-27 22:42:55,829 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:43:11] 2025-07-27 22:42:55,829 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:43:11] 2025-07-27 22:42:55,829 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:43:11] 2025-07-27 22:42:55,829 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:43:11] 2025-07-27 22:42:55,830 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:43:11] 2025-07-27 22:42:55,830 | INFO     | sum of square deviations: 310052325.0
[2025-07-28 00:43:11] 2025-07-27 22:42:55,830 | INFO     | sum of deviations: 2136841742.500002
[2025-07-28 00:43:11] 2025-07-27 22:42:55,830 | INFO     | mean x: 1753653137.5
[2025-07-28 00:43:11] 2025-07-27 22:42:55,830 | INFO     | mean y: 2317013.21
[2025-07-28 00:43:11] 2025-07-27 22:42:55,830 | INFO     | -- intersect: -12083640497.594332
[2025-07-28 00:43:11] 2025-07-27 22:42:55,830 | INFO     | intersect: -12083640497.594332
[2025-07-28 00:43:11] 2025-07-27 22:42:55,830 | INFO     | chi2: 2.111230222966821
[2025-07-28 00:43:11] 2025-07-27 22:42:55,830 | INFO     | sum of square deviations: 265828240.0
[2025-07-28 00:43:11] 2025-07-27 22:42:55,830 | INFO     | sum of deviations: 7523615254.999999
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | mean x: 1753652985.0
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | mean y: 2334797.4210526315
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | -- intersect: -49630504625.216225
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | intersect: -49630504625.216225
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | chi2: 1.477969389991115
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | current chi2=1.477969389991115 (change=29.99487341962222 %)
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | sum of square deviations: 226022842.5
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | sum of deviations: 7141147329.0
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | mean x: 1753652832.5
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | mean y: 2333331.5555555555
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | -- intersect: -55403983579.9781
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | intersect: -55403983579.9781
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | chi2: 1.482208207460601
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | current chi2=1.482208207460601 (change=-0.2868000851838567 %)
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | right removable region: 89
[2025-07-28 00:43:11] 2025-07-27 22:42:55,831 | INFO     | sum of square deviations: 265828240.0
[2025-07-28 00:43:11] 2025-07-27 22:42:55,832 | INFO     | sum of deviations: -8950163878.0
[2025-07-28 00:43:11] 2025-07-27 22:42:55,832 | INFO     | mean x: 1753653290.0
[2025-07-28 00:43:11] 2025-07-27 22:42:55,832 | INFO     | mean y: 2353930.8
[2025-07-28 00:43:11] 2025-07-27 22:42:55,832 | INFO     | -- intersect: 59046059485.53662
[2025-07-28 00:43:11] 2025-07-27 22:42:55,832 | INFO     | intersect: 59046059485.53662
[2025-07-28 00:43:11] 2025-07-27 22:42:55,832 | INFO     | chi2: 0.7365282850515312
[2025-07-28 00:43:11] 2025-07-27 22:42:55,832 | INFO     | current chi2=0.7365282850515312 (change=65.11378640570426 %)
[2025-07-28 00:43:11] 2025-07-27 22:42:55,832 | INFO     | sum of square deviations: 226022842.5
[2025-07-28 00:43:11] 2025-07-27 22:42:55,832 | INFO     | sum of deviations: -4996541415.0
[2025-07-28 00:43:11] 2025-07-27 22:42:55,832 | INFO     | mean x: 1753653442.5
[2025-07-28 00:43:11] 2025-07-27 22:42:55,832 | INFO     | mean y: 2338761.2
[2025-07-28 00:43:11] 2025-07-27 22:42:55,832 | INFO     | -- intersect: 38769226019.54678
[2025-07-28 00:43:11] 2025-07-27 22:42:55,832 | INFO     | intersect: 38769226019.54678
[2025-07-28 00:43:11] 2025-07-27 22:42:55,832 | INFO     | chi2: 0.6916222843897473
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | current chi2=0.6916222843897473 (change=6.0969825019879735 %)
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | left removable region: 20
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | sum of square deviations: 101843770.0
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | sum of deviations: 178131772.99999955
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | mean x: 1753653412.0
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | mean y: 2360153.188405797
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | -- intersect: -3064900529.5912933
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | intersect: -3064900529.5912933
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | chi2: 0.0013104141279374267
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | -- intersect: -3064900529.5912933
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | current memory leak: 1.75 B/s (using 69 data points, chi2=0.00)
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | could have reported an average CPU frequency of 3969 MHz (7 samples)
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | ..............................
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | . Timing measurements:
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | . get job = 0 s
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | . initial setup = 1 s
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | . payload setup = 3 s
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | . stage-in = 0 s
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | . payload execution = 6049 s
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | . stage-out = 0 s
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | . log creation = 0 s
[2025-07-28 00:43:11] 2025-07-27 22:42:55,833 | INFO     | ..............................
[2025-07-28 00:43:11] 2025-07-27 22:42:56,219 | INFO     | 
[2025-07-28 00:43:11] 2025-07-27 22:42:56,219 | INFO     | job summary report
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | --------------------------------------------------
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | PanDA job id: 6745983075
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | task id: 45758894
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | errors: (none)
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | pilot state: finished 
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | transexitcode: 0
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | exeerrorcode: 0
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | exeerrordiag: 
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | exitcode: 0
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | exitmsg: OK
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | cpuconsumptiontime: 17542 s
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | nevents: 400
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | neventsw: 0
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | pid: 1425304
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | pgrp: 1425304
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | corecount: 3
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | event service: False
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | sizes: {0: 2397456, 2: 2397718, 10: 2397746, 6056: 2424685, 6057: 2433689, 6059: 2433745, 6064: 2434223}
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | --------------------------------------------------
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | 
[2025-07-28 00:43:11] 2025-07-27 22:42:56,220 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 00:43:11] 2025-07-27 22:42:56,236 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,236 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,236 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,237 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:43:11] 2025-07-27 22:42:56,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,237 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:43:11] 2025-07-27 22:42:56,237 | INFO     | job 6745983075 has completed (purged errors)
[2025-07-28 00:43:11] 2025-07-27 22:42:56,237 | INFO     | overall cleanup function is called
[2025-07-28 00:43:11] 2025-07-27 22:42:56,909 | INFO     | PID=1418812 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:43:11] 2025-07-27 22:42:57,244 | INFO     | --- collectZombieJob: --- 10, [1425304]
[2025-07-28 00:43:11] 2025-07-27 22:42:57,244 | INFO     | zombie collector waiting for pid 1425304
[2025-07-28 00:43:11] 2025-07-27 22:42:57,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:43:11] 2025-07-27 22:42:57,244 | INFO     | collected zombie processes
[2025-07-28 00:43:11] 2025-07-27 22:42:57,244 | INFO     | will attempt to kill all subprocesses of pid=1425304
[2025-07-28 00:43:11] 2025-07-27 22:42:57,283 | INFO     | process IDs to be killed: [1425304] (in reverse order)
[2025-07-28 00:43:11] 2025-07-27 22:42:57,308 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:43:11] 2025-07-27 22:42:57,308 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:43:11] 2025-07-27 22:42:57,309 | INFO     | did not find any defunct processes belonging to 1425304
[2025-07-28 00:43:11] 2025-07-27 22:42:57,310 | INFO     | did not find any defunct processes belonging to 1425304
[2025-07-28 00:43:11] 2025-07-27 22:42:57,310 | INFO     | ready for new job
[2025-07-28 00:43:11] 2025-07-27 22:42:57,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:43:11] 2025-07-27 22:42:57,310 | INFO     | ***************************************
[2025-07-28 00:43:11] 2025-07-27 22:42:57,310 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:43:11] 2025-07-27 22:42:57,310 | INFO     | ***************************************
[2025-07-28 00:43:11] 2025-07-27 22:42:57,311 | INFO     | 
[2025-07-28 00:43:11] 2025-07-27 22:42:57,311 | INFO     | architecture information:
[2025-07-28 00:43:11] 2025-07-27 22:42:57,311 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:43:11] 2025-07-27 22:42:57,320 | INFO     | cat /etc/os-release:
[2025-07-28 00:43:11] NAME="CentOS Linux"
[2025-07-28 00:43:11] VERSION="7 (Core)"
[2025-07-28 00:43:11] ID="centos"
[2025-07-28 00:43:11] ID_LIKE="rhel fedora"
[2025-07-28 00:43:11] VERSION_ID="7"
[2025-07-28 00:43:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:43:11] ANSI_COLOR="0;31"
[2025-07-28 00:43:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:43:11] HOME_URL="https://www.centos.org/"
[2025-07-28 00:43:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:43:11] 
[2025-07-28 00:43:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:43:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:43:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:43:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:43:11] 
[2025-07-28 00:43:11] 2025-07-27 22:42:57,320 | INFO     | ***************************************
[2025-07-28 00:43:11] 2025-07-27 22:42:57,823 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 00:43:11] 2025-07-27 22:42:57,837 | INFO     | sufficient remaining disk space (281872957440 B)
[2025-07-28 00:43:11] 2025-07-27 22:42:57,837 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:43:11] 2025-07-27 22:42:57,837 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:43:11] 2025-07-27 22:42:57,837 | INFO     | update_server=False
[2025-07-28 00:43:11] 2025-07-27 22:42:57,837 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:43:11] 2025-07-27 22:42:57,837 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 00:43:11] 2025-07-27 22:42:57,837 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:43:11] 2025-07-27 22:42:57,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:43:11] 2025-07-27 22:42:57,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:43:11] 2025-07-27 22:42:57,838 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:43:11] 2025-07-27 22:42:57,838 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:43:11] 2025-07-27 22:42:57,838 | INFO     | aborting loop
[2025-07-28 00:43:11] 2025-07-27 22:42:58,025 | INFO     | all payload control threads have been joined
[2025-07-28 00:43:11] 2025-07-27 22:42:58,713 | INFO     | all data control threads have been joined
[2025-07-28 00:43:11] 2025-07-27 22:42:58,842 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:42:58,843 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:42:58,843 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:42:58,850 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:42:58,997 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:43:11] 2025-07-27 22:42:59,031 | INFO     | [payload] control thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:42:59,073 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:42:59,279 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:42:59,345 | INFO     | all job control threads have been joined
[2025-07-28 00:43:11] 2025-07-27 22:42:59,716 | INFO     | [data] control thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:42:59,752 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:42:59,809 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:42:59,890 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:43:00,227 | INFO     | [job] validate thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:43:00,255 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:43:00,351 | INFO     | [job] control thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:43:00,579 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:43:11] 2025-07-27 22:43:01,003 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:43:04,586 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:43:11] 2025-07-27 22:43:06,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695446284096)>', '<ExcThread(monitor, started 139694801147648)>']
[2025-07-28 00:43:11] 2025-07-27 22:43:06,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:43:11] 2025-07-27 22:43:06,886 | INFO     | [monitor] control thread has ended
[2025-07-28 00:43:11] 2025-07-27 22:43:11,527 | INFO     | all workflow threads have been joined
[2025-07-28 00:43:11] 2025-07-27 22:43:11,527 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:43:11] 2025-07-27 22:43:11,527 | INFO     | traces error code: 0
[2025-07-28 00:43:11] 2025-07-27 22:43:11,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:43:11] 2025-07-27 22:43:11,577 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:43:11] 2025-07-27 22:43:11,580 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:43:11] 2025-07-27 22:43:11,582 [wrapper] pilotpid: 1418812
[2025-07-28 00:43:11] 2025-07-27 22:43:11,585 [wrapper] Pilot exit status: 0
[2025-07-28 00:43:11] 2025-07-27 22:43:11,592 [wrapper] pandaids: 6745983075
[2025-07-28 00:43:11] 2025-07-27 22:43:11,609 [wrapper] cleanup supervisor_pilot 1438423 1418813
[2025-07-28 00:43:11] 2025-07-27 22:43:11,611 [wrapper] Test setup, not cleaning
[2025-07-28 00:43:11] 2025-07-27 22:43:11,614 [wrapper] apfmon messages muted
[2025-07-28 00:43:11] 2025-07-27 22:43:11,616 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:43:11] 2025-07-27 22:43:11,619 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:43:11]  *** Error codes and diagnostics ***
[2025-07-28 00:43:11]     "exeErrorCode": 0,
[2025-07-28 00:43:11]     "exeErrorDiag": "",
[2025-07-28 00:43:11]     "pilotErrorCode": 0,
[2025-07-28 00:43:11]     "pilotErrorDiag": "",
[2025-07-28 00:43:11]  *** Listing of results directory ***
[2025-07-28 00:43:11] total 405332
[2025-07-28 00:43:11] -rw-r--r-- 1 boinc boinc    530466 Jul 27 05:36 pilot3.tar.gz
[2025-07-28 00:43:11] -rwx------ 1 boinc boinc     36292 Jul 27 06:14 runpilot2-wrapper.sh
[2025-07-28 00:43:11] -rw-r--r-- 1 boinc boinc      5112 Jul 27 06:14 queuedata.json
[2025-07-28 00:43:11] -rw-r--r-- 1 boinc boinc       100 Jul 27 23:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:43:11] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 23:01 run_atlas
[2025-07-28 00:43:11] -rw-r--r-- 1 boinc boinc       105 Jul 27 23:01 job.xml
[2025-07-28 00:43:11] -rw-r--r-- 2 boinc boinc 237579547 Jul 27 23:01 EVNT.45758892._000002.pool.root.1
[2025-07-28 00:43:11] -rw-r--r-- 2 boinc boinc    542879 Jul 27 23:01 input.tar.gz
[2025-07-28 00:43:11] -rw-r--r-- 2 boinc boinc     15095 Jul 27 23:01 start_atlas.sh
[2025-07-28 00:43:11] drwxrwx--x 2 boinc boinc      4096 Jul 27 23:01 shared
[2025-07-28 00:43:11] -rw-r--r-- 1 boinc boinc         0 Jul 27 23:01 boinc_setup_complete
[2025-07-28 00:43:11] -rw-r--r-- 1 boinc boinc      6449 Jul 27 23:01 init_data.xml
[2025-07-28 00:43:11] -rw-r--r-- 1 boinc boinc         0 Jul 27 23:01 boinc_lockfile
[2025-07-28 00:43:11] -rw-r--r-- 1 boinc boinc      2546 Jul 27 23:01 pandaJob.out
[2025-07-28 00:43:11] -rw------- 1 boinc boinc    980109 Jul 27 23:01 agis_schedconf.cvmfs.json
[2025-07-28 00:43:11] -rw------- 1 boinc boinc   1593052 Jul 27 23:01 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:43:11] drwx------ 4 boinc boinc      4096 Jul 27 23:01 pilot3
[2025-07-28 00:43:11] -rw------- 1 boinc boinc        95 Jul 28 00:42 pilot_heartbeat.json
[2025-07-28 00:43:11] -rw------- 1 boinc boinc 171954947 Jul 28 00:42 HITS.45758894._000036.pool.root.1
[2025-07-28 00:43:11] -rw-r--r-- 1 boinc boinc       530 Jul 28 00:42 boinc_task_state.xml
[2025-07-28 00:43:11] -rw------- 1 boinc boinc      1015 Jul 28 00:42 memory_monitor_summary.json
[2025-07-28 00:43:11] -rw------- 1 boinc boinc    237797 Jul 28 00:42 log.45758894._000036.job.log.tgz.1
[2025-07-28 00:43:11] -rw-r--r-- 1 boinc boinc      8192 Jul 28 00:42 boinc_mmap_file
[2025-07-28 00:43:11] -rw-r--r-- 1 boinc boinc        27 Jul 28 00:42 wrapper_checkpoint.txt
[2025-07-28 00:43:11] -rw------- 1 boinc boinc      7735 Jul 28 00:42 heartbeat.json
[2025-07-28 00:43:11] -rw------- 1 boinc boinc      4484 Jul 28 00:43 pilotlog.txt
[2025-07-28 00:43:11] -rw------- 1 boinc boinc    584648 Jul 28 00:43 log.45758894._000036.job.log.1
[2025-07-28 00:43:11] -rw------- 1 boinc boinc       357 Jul 28 00:43 output.list
[2025-07-28 00:43:11] -rw-r--r-- 1 boinc boinc       620 Jul 28 00:43 runtime_log
[2025-07-28 00:43:11] -rw------- 1 boinc boinc    839680 Jul 28 00:43 result.tar.gz
[2025-07-28 00:43:11] -rw-r--r-- 1 boinc boinc      8739 Jul 28 00:43 runtime_log.err
[2025-07-28 00:43:11] -rw------- 1 boinc boinc       660 Jul 28 00:43 kQSKDmnx7z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxt1KDmjbZX4m.diag
[2025-07-28 00:43:11] -rw-r--r-- 1 boinc boinc     20886 Jul 28 00:43 stderr.txt
[2025-07-28 00:43:11] HITS file was successfully produced:
[2025-07-28 00:43:11] -rw------- 1 boinc boinc 171954947 Jul 28 00:42 shared/HITS.pool.root.1
[2025-07-28 00:43:11]  *** Contents of shared directory: ***
[2025-07-28 00:43:11] total 401316
[2025-07-28 00:43:11] -rw-r--r-- 2 boinc boinc 237579547 Jul 27 23:01 ATLAS.root_0
[2025-07-28 00:43:11] -rw-r--r-- 2 boinc boinc    542879 Jul 27 23:01 input.tar.gz
[2025-07-28 00:43:11] -rw-r--r-- 2 boinc boinc     15095 Jul 27 23:01 start_atlas.sh
[2025-07-28 00:43:11] -rw------- 1 boinc boinc 171954947 Jul 28 00:42 HITS.pool.root.1
[2025-07-28 00:43:11] -rw------- 1 boinc boinc    839680 Jul 28 00:43 result.tar.gz
00:43:13 (1415180): run_atlas exited; CPU time 17560.542496
00:43:13 (1415180): called boinc_finish(0)

</stderr_txt>
]]>

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