Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:37:44 (1942792): wrapper (7.7.26015): starting
06:37:44 (1942792): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 06:37:44] Arguments: --nthreads 12
[2025-07-27 06:37:44] Threads: 12
[2025-07-27 06:37:44] Checking for CVMFS
[2025-07-27 06:37:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 06:37:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 06:37:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 06:37:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 06:37:44] 2.12.6.0 1263230 18254 334528 148809 0 105 22114814 32935936 6825 16776704 0 35622086 99.608 56752168 29264 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 06:37:44] CVMFS is ok
[2025-07-27 06:37:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 06:37:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 06:37:44] Further information can be found at the LHC@home message board.
[2025-07-27 06:37:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 06:37:44] Checking for apptainer binary...
[2025-07-27 06:37:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 06:37:44] Running /usr/bin/apptainer --version
[2025-07-27 06:37:45] apptainer version 1.4.1-1.el9
[2025-07-27 06:37:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 06:37:45] c6-5-7-2.aglt2.org
[2025-07-27 06:37:45] apptainer works
[2025-07-27 06:37:45] Set ATHENA_PROC_NUMBER=12
[2025-07-27 06:37:45] Set ATHENA_CORE_NUMBER=12
[2025-07-27 06:37:45] Starting ATLAS job with PandaID=6745940180
[2025-07-27 06:37:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 08:01:26]  *** The last 200 lines of the pilot log: ***
[2025-07-27 08:01:26]  is_altstaged=None
[2025-07-27 08:01:26]  is_tar=False
[2025-07-27 08:01:26]  lfn=log.45758425._000087.job.log.tgz.1
[2025-07-27 08:01:26]  mtime=0
[2025-07-27 08:01:26]  protocol_id=None
[2025-07-27 08:01:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 08:01:26]  replicas=None
[2025-07-27 08:01:26]  scope=mc23_13p6TeV
[2025-07-27 08:01:26]  status=None
[2025-07-27 08:01:26]  status_code=0
[2025-07-27 08:01:26]  storage_token=
[2025-07-27 08:01:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745940180/log.45758425._000087.job.log.tgz.1
[2025-07-27 08:01:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/47/log.45758425._000087.job.log.tgz.1
[2025-07-27 08:01:26]  workdir=None
[2025-07-27 08:01:26] ]
[2025-07-27 08:01:26] 2025-07-27 12:00:48,007 | INFO     | transferring file log.45758425._000087.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745940180/log.45758425._000087.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 08:01:26] 2025-07-27 12:00:48,007 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745940180/log.45758425._000087.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758425._000087.job
[2025-07-27 08:01:26] 2025-07-27 12:00:48,030 | INFO     | adding to output.list: log.45758425._000087.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/47/log.45758425._000087.job.log.tg
[2025-07-27 08:01:26] 2025-07-27 12:00:48,031 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 08:01:26] 2025-07-27 12:00:48,032 | INFO     | summary of transferred files:
[2025-07-27 08:01:26] 2025-07-27 12:00:48,032 | INFO     |  -- lfn=log.45758425._000087.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 08:01:26] 2025-07-27 12:00:48,032 | INFO     | stage-out finished correctly
[2025-07-27 08:01:26] 2025-07-27 12:00:48,124 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 08:01:26] 2025-07-27 12:00:48,204 | INFO     | job 6745940180 has state=finished
[2025-07-27 08:01:26] 2025-07-27 12:00:48,204 | INFO     | preparing for final server update for job 6745940180 in state='finished'
[2025-07-27 08:01:26] 2025-07-27 12:00:48,204 | INFO     | this job has now completed (state=finished)
[2025-07-27 08:01:26] 2025-07-27 12:00:48,204 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 08:01:26] 2025-07-27 12:00:48,205 | INFO     | log transfer has been attempted: DONE
[2025-07-27 08:01:26] 2025-07-27 12:00:48,205 | INFO     | job 6745940180 has finished - writing final server update
[2025-07-27 08:01:26] 2025-07-27 12:00:48,205 | INFO     | total number of processed events: 400 (read)
[2025-07-27 08:01:26] 2025-07-27 12:00:48,206 | INFO     | executing command: lscpu
[2025-07-27 08:01:26] 2025-07-27 12:00:48,276 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 08:01:26] 2025-07-27 12:00:49,566 | INFO     | monitor loop #364: job 0:6745940180 is in state 'finished'
[2025-07-27 08:01:26] 2025-07-27 12:00:49,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:01:26] 2025-07-27 12:00:52,069 | INFO     | monitor loop #365: job 0:6745940180 is in state 'finished'
[2025-07-27 08:01:26] 2025-07-27 12:00:52,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 08:01:26] 2025-07-27 12:00:53,530 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 08:01:26] 2025-07-27 12:00:53,551 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2737.4069821428566
[2025-07-27 08:01:26] 2025-07-27 12:00:53,560 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745940180/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 08:01:26] 2025-07-27 12:00:53,561 | INFO     | extracted standard info from prmon json
[2025-07-27 08:01:26] 2025-07-27 12:00:53,561 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 08:01:26] 2025-07-27 12:00:53,561 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 08:01:26] 2025-07-27 12:00:53,561 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 08:01:26] 2025-07-27 12:00:53,561 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 08:01:26] 2025-07-27 12:00:53,563 | INFO     | fitting pss+swap vs Time
[2025-07-27 08:01:26] 2025-07-27 12:00:53,563 | INFO     | sum of square deviations: 125630262.5
[2025-07-27 08:01:26] 2025-07-27 12:00:53,563 | INFO     | sum of deviations: -12387221291.500006
[2025-07-27 08:01:26] 2025-07-27 12:00:53,564 | INFO     | mean x: 1753615239.5
[2025-07-27 08:01:26] 2025-07-27 12:00:53,564 | INFO     | mean y: 2522999.2297297297
[2025-07-27 08:01:26] 2025-07-27 12:00:53,564 | INFO     | -- intersect: 172910066130.67294
[2025-07-27 08:01:26] 2025-07-27 12:00:53,564 | INFO     | intersect: 172910066130.67294
[2025-07-27 08:01:26] 2025-07-27 12:00:53,564 | INFO     | chi2: 0.1529580600595625
[2025-07-27 08:01:26] 2025-07-27 12:00:53,564 | INFO     | -- intersect: 172910066130.67294
[2025-07-27 08:01:26] 2025-07-27 12:00:53,564 | INFO     | current memory leak: -98.60 B/s (using 74 data points, chi2=0.15)
[2025-07-27 08:01:26] 2025-07-27 12:00:53,564 | INFO     | could have reported an average CPU frequency of 2741 MHz (6 samples)
[2025-07-27 08:01:26] 2025-07-27 12:00:53,565 | INFO     | ..............................
[2025-07-27 08:01:26] 2025-07-27 12:00:53,565 | INFO     | . Timing measurements:
[2025-07-27 08:01:26] 2025-07-27 12:00:53,565 | INFO     | . get job = 0 s
[2025-07-27 08:01:26] 2025-07-27 12:00:53,565 | INFO     | . initial setup = 2 s
[2025-07-27 08:01:26] 2025-07-27 12:00:53,565 | INFO     | . payload setup = 8 s
[2025-07-27 08:01:26] 2025-07-27 12:00:53,565 | INFO     | . stage-in = 0 s
[2025-07-27 08:01:26] 2025-07-27 12:00:53,565 | INFO     | . payload execution = 4938 s
[2025-07-27 08:01:26] 2025-07-27 12:00:53,565 | INFO     | . stage-out = 1 s
[2025-07-27 08:01:26] 2025-07-27 12:00:53,565 | INFO     | . log creation = 0 s
[2025-07-27 08:01:26] 2025-07-27 12:00:53,565 | INFO     | ..............................
[2025-07-27 08:01:26] 2025-07-27 12:00:54,102 | INFO     | 
[2025-07-27 08:01:26] 2025-07-27 12:00:54,103 | INFO     | job summary report
[2025-07-27 08:01:26] 2025-07-27 12:00:54,103 | INFO     | --------------------------------------------------
[2025-07-27 08:01:26] 2025-07-27 12:00:54,103 | INFO     | PanDA job id: 6745940180
[2025-07-27 08:01:26] 2025-07-27 12:00:54,103 | INFO     | task id: 45758425
[2025-07-27 08:01:26] 2025-07-27 12:00:54,103 | INFO     | errors: (none)
[2025-07-27 08:01:26] 2025-07-27 12:00:54,103 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 08:01:26] 2025-07-27 12:00:54,103 | INFO     | pilot state: finished 
[2025-07-27 08:01:26] 2025-07-27 12:00:54,103 | INFO     | transexitcode: 0
[2025-07-27 08:01:26] 2025-07-27 12:00:54,103 | INFO     | exeerrorcode: 0
[2025-07-27 08:01:26] 2025-07-27 12:00:54,103 | INFO     | exeerrordiag: 
[2025-07-27 08:01:26] 2025-07-27 12:00:54,103 | INFO     | exitcode: 0
[2025-07-27 08:01:26] 2025-07-27 12:00:54,104 | INFO     | exitmsg: OK
[2025-07-27 08:01:26] 2025-07-27 12:00:54,104 | INFO     | cpuconsumptiontime: 53022 s
[2025-07-27 08:01:26] 2025-07-27 12:00:54,104 | INFO     | nevents: 400
[2025-07-27 08:01:26] 2025-07-27 12:00:54,104 | INFO     | neventsw: 0
[2025-07-27 08:01:26] 2025-07-27 12:00:54,104 | INFO     | pid: 1955419
[2025-07-27 08:01:26] 2025-07-27 12:00:54,104 | INFO     | pgrp: 1955419
[2025-07-27 08:01:26] 2025-07-27 12:00:54,104 | INFO     | corecount: 12
[2025-07-27 08:01:26] 2025-07-27 12:00:54,104 | INFO     | event service: False
[2025-07-27 08:01:26] 2025-07-27 12:00:54,104 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 11: 2397793, 4951: 2423976, 4954: 2433158, 4960: 2433296}
[2025-07-27 08:01:26] 2025-07-27 12:00:54,104 | INFO     | --------------------------------------------------
[2025-07-27 08:01:26] 2025-07-27 12:00:54,104 | INFO     | 
[2025-07-27 08:01:26] 2025-07-27 12:00:54,105 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 08:01:26] 2025-07-27 12:00:54,125 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,125 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,127 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 08:01:26] 2025-07-27 12:00:54,127 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,127 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 08:01:26] 2025-07-27 12:00:54,127 | INFO     | job 6745940180 has completed (purged errors)
[2025-07-27 08:01:26] 2025-07-27 12:00:54,127 | INFO     | overall cleanup function is called
[2025-07-27 08:01:26] 2025-07-27 12:00:55,134 | INFO     | --- collectZombieJob: --- 10, [1955419]
[2025-07-27 08:01:26] 2025-07-27 12:00:55,135 | INFO     | zombie collector waiting for pid 1955419
[2025-07-27 08:01:26] 2025-07-27 12:00:55,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 08:01:26] 2025-07-27 12:00:55,135 | INFO     | collected zombie processes
[2025-07-27 08:01:26] 2025-07-27 12:00:55,135 | INFO     | will attempt to kill all subprocesses of pid=1955419
[2025-07-27 08:01:26] 2025-07-27 12:00:55,418 | INFO     | process IDs to be killed: [1955419] (in reverse order)
[2025-07-27 08:01:26] 2025-07-27 12:00:55,526 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 08:01:26] 2025-07-27 12:00:55,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 08:01:26] 2025-07-27 12:00:55,539 | INFO     | did not find any defunct processes belonging to 1955419
[2025-07-27 08:01:26] 2025-07-27 12:00:55,552 | INFO     | did not find any defunct processes belonging to 1955419
[2025-07-27 08:01:26] 2025-07-27 12:00:55,552 | INFO     | ready for new job
[2025-07-27 08:01:26] 2025-07-27 12:00:55,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 08:01:26] 2025-07-27 12:00:55,554 | INFO     | ***************************************
[2025-07-27 08:01:26] 2025-07-27 12:00:55,554 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 08:01:26] 2025-07-27 12:00:55,554 | INFO     | ***************************************
[2025-07-27 08:01:26] 2025-07-27 12:00:55,555 | INFO     | 
[2025-07-27 08:01:26] 2025-07-27 12:00:55,570 | INFO     | architecture information:
[2025-07-27 08:01:26] 2025-07-27 12:00:55,571 | INFO     | executing command: cat /etc/os-release
[2025-07-27 08:01:26] 2025-07-27 12:00:55,588 | INFO     | cat /etc/os-release:
[2025-07-27 08:01:26] NAME="CentOS Linux"
[2025-07-27 08:01:26] VERSION="7 (Core)"
[2025-07-27 08:01:26] ID="centos"
[2025-07-27 08:01:26] ID_LIKE="rhel fedora"
[2025-07-27 08:01:26] VERSION_ID="7"
[2025-07-27 08:01:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 08:01:26] ANSI_COLOR="0;31"
[2025-07-27 08:01:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 08:01:26] HOME_URL="https://www.centos.org/"
[2025-07-27 08:01:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 08:01:26] 
[2025-07-27 08:01:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 08:01:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 08:01:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 08:01:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 08:01:26] 
[2025-07-27 08:01:26] 2025-07-27 12:00:55,588 | INFO     | ***************************************
[2025-07-27 08:01:26] 2025-07-27 12:00:56,091 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 08:01:26] 2025-07-27 12:00:56,115 | INFO     | sufficient remaining disk space (76297535488 B)
[2025-07-27 08:01:26] 2025-07-27 12:00:56,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 08:01:26] 2025-07-27 12:00:56,116 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 08:01:26] 2025-07-27 12:00:56,116 | INFO     | update_server=False
[2025-07-27 08:01:26] 2025-07-27 12:00:56,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 08:01:26] 2025-07-27 12:00:56,116 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:01:26] 2025-07-27 12:00:56,117 | INFO     | aborting loop
[2025-07-27 08:01:26] 2025-07-27 12:00:56,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 08:01:26] 2025-07-27 12:00:56,457 | INFO     | all data control threads have been joined
[2025-07-27 08:01:26] 2025-07-27 12:00:57,038 | INFO     | all job control threads have been joined
[2025-07-27 08:01:26] 2025-07-27 12:00:57,122 | INFO     | [job] retrieve thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:00:57,122 | INFO     | [job] job monitor thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:00:57,124 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:00:57,213 | INFO     | all payload control threads have been joined
[2025-07-27 08:01:26] 2025-07-27 12:00:57,463 | INFO     | [data] control thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:00:57,565 | INFO     | [payload] validate_post thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:00:57,751 | INFO     | [data] copytool_in thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:00:57,954 | INFO     | [job] validate thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:00:58,024 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:00:58,043 | INFO     | [job] control thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:00:58,071 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:00:58,146 | INFO     | [data] copytool_out thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:00:58,218 | INFO     | [payload] control thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:00:58,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 08:01:26] 2025-07-27 12:00:58,676 | INFO     | [payload] failed_post thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:00:58,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 08:01:26] 2025-07-27 12:00:59,664 | INFO     | [job] queue monitor thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:01:02,719 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:01:06,879 | INFO     | job.realtimelogging is not enabled
[2025-07-27 08:01:26] 2025-07-27 12:01:07,884 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 08:01:26] 2025-07-27 12:01:09,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140606905935680)>', '<ExcThread(monitor, started 140606256953088)>']
[2025-07-27 08:01:26] 2025-07-27 12:01:14,325 | INFO     | all workflow threads have been joined
[2025-07-27 08:01:26] 2025-07-27 12:01:14,326 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 08:01:26] 2025-07-27 12:01:14,326 | INFO     | traces error code: 0
[2025-07-27 08:01:26] 2025-07-27 12:01:14,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 08:01:26] 2025-07-27 12:01:26,168 | INFO     | PID=1946556 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 08:01:26] 2025-07-27 12:01:26,169 | INFO     | .. there are 9 such processes running
[2025-07-27 08:01:26] 2025-07-27 12:01:26,169 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 08:01:26] 2025-07-27 12:01:26,170 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 08:01:26] 2025-07-27 12:01:26,170 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 08:01:26] 2025-07-27 12:01:26,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 08:01:26] 2025-07-27 12:01:26,170 | INFO     | [monitor] control thread has ended
[2025-07-27 08:01:26] 2025-07-27 12:01:26,386 [wrapper] ==== pilot stdout END ====
[2025-07-27 08:01:26] 2025-07-27 12:01:26,390 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 08:01:26] 2025-07-27 12:01:26,393 [wrapper] pilotpid: 1946556
[2025-07-27 08:01:26] 2025-07-27 12:01:26,396 [wrapper] Pilot exit status: 0
[2025-07-27 08:01:26] 2025-07-27 12:01:26,412 [wrapper] pandaids: 6745940180
[2025-07-27 08:01:26] 2025-07-27 12:01:26,482 [wrapper] cleanup supervisor_pilot 2383252 1946557
[2025-07-27 08:01:26] 2025-07-27 12:01:26,486 [wrapper] Test setup, not cleaning
[2025-07-27 08:01:26] 2025-07-27 12:01:26,491 [wrapper] apfmon messages muted
[2025-07-27 08:01:26] 2025-07-27 12:01:26,494 [wrapper] ==== wrapper stdout END ====
[2025-07-27 08:01:26] 2025-07-27 12:01:26,498 [wrapper] ==== wrapper stderr END ====
[2025-07-27 08:01:26]  *** Error codes and diagnostics ***
[2025-07-27 08:01:26]     "exeErrorCode": 0,
[2025-07-27 08:01:26]     "exeErrorDiag": "",
[2025-07-27 08:01:26]     "pilotErrorCode": 0,
[2025-07-27 08:01:26]     "pilotErrorDiag": "",
[2025-07-27 08:01:26]  *** Listing of results directory ***
[2025-07-27 08:01:26] total 405308
[2025-07-27 08:01:26] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 21:40 pilot3.tar.gz
[2025-07-27 08:01:26] -rwx------. 1 boincer umatlas     36292 Jul 26 21:43 runpilot2-wrapper.sh
[2025-07-27 08:01:26] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:43 queuedata.json
[2025-07-27 08:01:26] -rw-r--r--. 1 boincer umatlas       100 Jul 27 06:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 08:01:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 06:37 run_atlas
[2025-07-27 08:01:26] -rw-r--r--. 1 boincer umatlas       105 Jul 27 06:37 job.xml
[2025-07-27 08:01:26] -rw-r--r--. 2 boincer umatlas 237221600 Jul 27 06:37 EVNT.45758423._000004.pool.root.1
[2025-07-27 08:01:26] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 06:37 start_atlas.sh
[2025-07-27 08:01:26] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 06:37 shared
[2025-07-27 08:01:26] -rw-r--r--. 2 boincer umatlas    542885 Jul 27 06:37 input.tar.gz
[2025-07-27 08:01:26] -rw-r--r--. 1 boincer umatlas         0 Jul 27 06:37 boinc_lockfile
[2025-07-27 08:01:26] -rw-r--r--. 1 boincer umatlas      2568 Jul 27 06:37 pandaJob.out
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas    980117 Jul 27 06:37 agis_schedconf.cvmfs.json
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas   1593052 Jul 27 06:37 agis_ddmendpoints.agis.ALL.json
[2025-07-27 08:01:26] drwx------. 4 boincer umatlas      4096 Jul 27 06:37 pilot3
[2025-07-27 08:01:26] -rw-r--r--. 1 boincer umatlas      6841 Jul 27 07:57 init_data.xml
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas 172217252 Jul 27 08:00 HITS.45758425._000087.pool.root.1
[2025-07-27 08:01:26] -rw-r--r--. 1 boincer umatlas       529 Jul 27 08:00 boinc_task_state.xml
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas        95 Jul 27 08:00 pilot_heartbeat.json
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas      1038 Jul 27 08:00 memory_monitor_summary.json
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas    369724 Jul 27 08:00 log.45758425._000087.job.log.tgz.1
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas      7815 Jul 27 08:00 heartbeat.json
[2025-07-27 08:01:26] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 08:01 boinc_mmap_file
[2025-07-27 08:01:26] -rw-r--r--. 1 boincer umatlas        27 Jul 27 08:01 wrapper_checkpoint.txt
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas       822 Jul 27 08:01 pilotlog.txt
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas    487313 Jul 27 08:01 log.45758425._000087.job.log.1
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas       357 Jul 27 08:01 output.list
[2025-07-27 08:01:26] -rw-r--r--. 1 boincer umatlas       620 Jul 27 08:01 runtime_log
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas    880640 Jul 27 08:01 result.tar.gz
[2025-07-27 08:01:26] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 08:01 runtime_log.err
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas       654 Jul 27 08:01 ApdNDmwa5z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmvk1KDmLyZFLo.diag
[2025-07-27 08:01:26] -rw-r--r--. 1 boincer umatlas     21484 Jul 27 08:01 stderr.txt
[2025-07-27 08:01:26] HITS file was successfully produced:
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas 172217252 Jul 27 08:00 shared/HITS.pool.root.1
[2025-07-27 08:01:26]  *** Contents of shared directory: ***
[2025-07-27 08:01:26] total 401264
[2025-07-27 08:01:26] -rw-r--r--. 2 boincer umatlas 237221600 Jul 27 06:37 ATLAS.root_0
[2025-07-27 08:01:26] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 06:37 start_atlas.sh
[2025-07-27 08:01:26] -rw-r--r--. 2 boincer umatlas    542885 Jul 27 06:37 input.tar.gz
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas 172217252 Jul 27 08:00 HITS.pool.root.1
[2025-07-27 08:01:26] -rw-------. 1 boincer umatlas    880640 Jul 27 08:01 result.tar.gz
08:01:28 (1942792): run_atlas exited; CPU time 53115.953440
08:01:28 (1942792): called boinc_finish(0)

</stderr_txt>
]]>

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