Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:01:54 (153236): wrapper (7.7.26015): starting
05:01:54 (153236): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 05:01:54] Arguments: --nthreads 8
[2025-07-27 05:01:54] Threads: 8
[2025-07-27 05:01:54] Checking for CVMFS
[2025-07-27 05:01:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 05:01:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 05:01:54] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 05:01:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 05:01:55] 2.13.1.0 695916 13922 259568 148805 1 522 30787269 40960001 10181 16776704 0 46307641 99.748 52143911 36625 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 05:01:55] CVMFS is ok
[2025-07-27 05:01:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 05:01:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 05:01:55] Further information can be found at the LHC@home message board.
[2025-07-27 05:01:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 05:01:55] Checking for apptainer binary...
[2025-07-27 05:01:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 05:01:55] Running /usr/bin/apptainer --version
[2025-07-27 05:01:55] apptainer version 1.4.1-1.el9
[2025-07-27 05:01:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 05:01:55] c-212-12.aglt2.org
[2025-07-27 05:01:55] apptainer works
[2025-07-27 05:01:55] Set ATHENA_PROC_NUMBER=8
[2025-07-27 05:01:55] Set ATHENA_CORE_NUMBER=8
[2025-07-27 05:01:55] Starting ATLAS job with PandaID=6745940090
[2025-07-27 05:01:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 06:40:53]  *** The last 200 lines of the pilot log: ***
[2025-07-27 06:40:53]  is_tar=False
[2025-07-27 06:40:53]  lfn=log.45759799._000103.job.log.tgz.1
[2025-07-27 06:40:53]  mtime=0
[2025-07-27 06:40:53]  protocol_id=None
[2025-07-27 06:40:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 06:40:53]  replicas=None
[2025-07-27 06:40:53]  scope=mc23_13p6TeV
[2025-07-27 06:40:53]  status=None
[2025-07-27 06:40:53]  status_code=0
[2025-07-27 06:40:53]  storage_token=
[2025-07-27 06:40:53]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6745940090/log.45759799._000103.job.log.tgz.1
[2025-07-27 06:40:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/54/log.45759799._000103.job.log.tgz.1
[2025-07-27 06:40:53]  workdir=None
[2025-07-27 06:40:53] ]
[2025-07-27 06:40:53] 2025-07-27 10:40:11,675 | INFO     | transferring file log.45759799._000103.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6745940090/log.45759799._000103.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 06:40:53] 2025-07-27 10:40:11,675 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6745940090/log.45759799._000103.job.log.tgz.1 /tmp/boinchome/slots/2/log.45759799._000103.job
[2025-07-27 06:40:53] 2025-07-27 10:40:11,700 | INFO     | adding to output.list: log.45759799._000103.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/54/log.45759799._000103.job.log.tg
[2025-07-27 06:40:53] 2025-07-27 10:40:11,701 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 06:40:53] 2025-07-27 10:40:11,701 | INFO     | summary of transferred files:
[2025-07-27 06:40:53] 2025-07-27 10:40:11,702 | INFO     |  -- lfn=log.45759799._000103.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 06:40:53] 2025-07-27 10:40:11,702 | INFO     | stage-out finished correctly
[2025-07-27 06:40:53] 2025-07-27 10:40:13,025 | INFO     | monitor loop #429: job 0:6745940090 is in state 'finished'
[2025-07-27 06:40:53] 2025-07-27 10:40:13,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:40:53] 2025-07-27 10:40:13,387 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 06:40:53] 2025-07-27 10:40:13,466 | INFO     | job 6745940090 has state=finished
[2025-07-27 06:40:53] 2025-07-27 10:40:13,466 | INFO     | preparing for final server update for job 6745940090 in state='finished'
[2025-07-27 06:40:53] 2025-07-27 10:40:13,468 | INFO     | this job has now completed (state=finished)
[2025-07-27 06:40:53] 2025-07-27 10:40:13,468 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 06:40:53] 2025-07-27 10:40:13,468 | INFO     | log transfer has been attempted: DONE
[2025-07-27 06:40:53] 2025-07-27 10:40:13,468 | INFO     | job 6745940090 has finished - writing final server update
[2025-07-27 06:40:53] 2025-07-27 10:40:13,469 | INFO     | total number of processed events: 400 (read)
[2025-07-27 06:40:53] 2025-07-27 10:40:13,470 | INFO     | executing command: lscpu
[2025-07-27 06:40:53] 2025-07-27 10:40:13,546 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 06:40:53] 2025-07-27 10:40:15,532 | INFO     | monitor loop #430: job 0:6745940090 is in state 'finished'
[2025-07-27 06:40:53] 2025-07-27 10:40:15,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:40:53] 2025-07-27 10:40:18,036 | INFO     | monitor loop #431: job 0:6745940090 is in state 'finished'
[2025-07-27 06:40:53] 2025-07-27 10:40:18,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:40:53] 2025-07-27 10:40:19,413 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 06:40:53] 2025-07-27 10:40:19,419 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3068.826718750001
[2025-07-27 06:40:53] 2025-07-27 10:40:19,435 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745940090/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 06:40:53] 2025-07-27 10:40:19,436 | INFO     | extracted standard info from prmon json
[2025-07-27 06:40:53] 2025-07-27 10:40:19,436 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 06:40:53] 2025-07-27 10:40:19,436 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 06:40:53] 2025-07-27 10:40:19,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 06:40:53] 2025-07-27 10:40:19,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 06:40:53] 2025-07-27 10:40:19,439 | INFO     | fitting pss+swap vs Time
[2025-07-27 06:40:53] 2025-07-27 10:40:19,439 | INFO     | sum of square deviations: 218571540.0
[2025-07-27 06:40:53] 2025-07-27 10:40:19,440 | INFO     | sum of deviations: -726874109.0
[2025-07-27 06:40:53] 2025-07-27 10:40:19,440 | INFO     | mean x: 1753609944.0
[2025-07-27 06:40:53] 2025-07-27 10:40:19,440 | INFO     | mean y: 2537023.4606741574
[2025-07-27 06:40:53] 2025-07-27 10:40:19,440 | INFO     | -- intersect: 5834282847.178346
[2025-07-27 06:40:53] 2025-07-27 10:40:19,440 | INFO     | intersect: 5834282847.178346
[2025-07-27 06:40:53] 2025-07-27 10:40:19,440 | INFO     | chi2: 0.014452187363958641
[2025-07-27 06:40:53] 2025-07-27 10:40:19,441 | INFO     | -- intersect: 5834282847.178346
[2025-07-27 06:40:53] 2025-07-27 10:40:19,441 | INFO     | current memory leak: -3.33 B/s (using 89 data points, chi2=0.01)
[2025-07-27 06:40:53] 2025-07-27 10:40:19,441 | INFO     | could have reported an average CPU frequency of 3081 MHz (7 samples)
[2025-07-27 06:40:53] 2025-07-27 10:40:19,441 | INFO     | ..............................
[2025-07-27 06:40:53] 2025-07-27 10:40:19,441 | INFO     | . Timing measurements:
[2025-07-27 06:40:53] 2025-07-27 10:40:19,442 | INFO     | . get job = 0 s
[2025-07-27 06:40:53] 2025-07-27 10:40:19,442 | INFO     | . initial setup = 2 s
[2025-07-27 06:40:53] 2025-07-27 10:40:19,442 | INFO     | . payload setup = 7 s
[2025-07-27 06:40:53] 2025-07-27 10:40:19,442 | INFO     | . stage-in = 0 s
[2025-07-27 06:40:53] 2025-07-27 10:40:19,442 | INFO     | . payload execution = 5856 s
[2025-07-27 06:40:53] 2025-07-27 10:40:19,442 | INFO     | . stage-out = 0 s
[2025-07-27 06:40:53] 2025-07-27 10:40:19,442 | INFO     | . log creation = 0 s
[2025-07-27 06:40:53] 2025-07-27 10:40:19,442 | INFO     | ..............................
[2025-07-27 06:40:53] 2025-07-27 10:40:19,535 | INFO     | 
[2025-07-27 06:40:53] 2025-07-27 10:40:19,535 | INFO     | job summary report
[2025-07-27 06:40:53] 2025-07-27 10:40:19,535 | INFO     | --------------------------------------------------
[2025-07-27 06:40:53] 2025-07-27 10:40:19,535 | INFO     | PanDA job id: 6745940090
[2025-07-27 06:40:53] 2025-07-27 10:40:19,535 | INFO     | task id: 45759799
[2025-07-27 06:40:53] 2025-07-27 10:40:19,535 | INFO     | errors: (none)
[2025-07-27 06:40:53] 2025-07-27 10:40:19,535 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | pilot state: finished 
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | transexitcode: 0
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | exeerrorcode: 0
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | exeerrordiag: 
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | exitcode: 0
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | exitmsg: OK
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | cpuconsumptiontime: 43740 s
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | nevents: 400
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | neventsw: 0
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | pid: 174719
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | pgrp: 174719
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | corecount: 8
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | event service: False
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | sizes: {0: 2397471, 5: 2397733, 11: 2397789, 5868: 2424495, 5869: 2433493, 5870: 2433549, 5876: 2433871}
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | --------------------------------------------------
[2025-07-27 06:40:53] 2025-07-27 10:40:19,536 | INFO     | 
[2025-07-27 06:40:53] 2025-07-27 10:40:19,537 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 06:40:53] 2025-07-27 10:40:19,571 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,572 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,572 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,572 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,572 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,572 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,574 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 06:40:53] 2025-07-27 10:40:19,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,574 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 06:40:53] 2025-07-27 10:40:19,575 | INFO     | job 6745940090 has completed (purged errors)
[2025-07-27 06:40:53] 2025-07-27 10:40:19,575 | INFO     | overall cleanup function is called
[2025-07-27 06:40:53] 2025-07-27 10:40:20,586 | INFO     | --- collectZombieJob: --- 10, [174719]
[2025-07-27 06:40:53] 2025-07-27 10:40:20,586 | INFO     | zombie collector waiting for pid 174719
[2025-07-27 06:40:53] 2025-07-27 10:40:20,586 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 06:40:53] 2025-07-27 10:40:20,586 | INFO     | collected zombie processes
[2025-07-27 06:40:53] 2025-07-27 10:40:20,586 | INFO     | will attempt to kill all subprocesses of pid=174719
[2025-07-27 06:40:53] 2025-07-27 10:40:21,024 | INFO     | process IDs to be killed: [174719] (in reverse order)
[2025-07-27 06:40:53] 2025-07-27 10:40:21,167 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 06:40:53] 2025-07-27 10:40:21,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 06:40:53] 2025-07-27 10:40:21,184 | INFO     | did not find any defunct processes belonging to 174719
[2025-07-27 06:40:53] 2025-07-27 10:40:21,201 | INFO     | did not find any defunct processes belonging to 174719
[2025-07-27 06:40:53] 2025-07-27 10:40:21,202 | INFO     | ready for new job
[2025-07-27 06:40:53] 2025-07-27 10:40:21,202 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 06:40:53] 2025-07-27 10:40:21,203 | INFO     | ***************************************
[2025-07-27 06:40:53] 2025-07-27 10:40:21,204 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 06:40:53] 2025-07-27 10:40:21,204 | INFO     | ***************************************
[2025-07-27 06:40:53] 2025-07-27 10:40:21,204 | INFO     | 
[2025-07-27 06:40:53] 2025-07-27 10:40:21,210 | INFO     | architecture information:
[2025-07-27 06:40:53] 2025-07-27 10:40:21,210 | INFO     | executing command: cat /etc/os-release
[2025-07-27 06:40:53] 2025-07-27 10:40:21,237 | INFO     | cat /etc/os-release:
[2025-07-27 06:40:53] NAME="CentOS Linux"
[2025-07-27 06:40:53] VERSION="7 (Core)"
[2025-07-27 06:40:53] ID="centos"
[2025-07-27 06:40:53] ID_LIKE="rhel fedora"
[2025-07-27 06:40:53] VERSION_ID="7"
[2025-07-27 06:40:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 06:40:53] ANSI_COLOR="0;31"
[2025-07-27 06:40:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 06:40:53] HOME_URL="https://www.centos.org/"
[2025-07-27 06:40:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 06:40:53] 
[2025-07-27 06:40:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 06:40:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 06:40:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 06:40:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 06:40:53] 
[2025-07-27 06:40:53] 2025-07-27 10:40:21,237 | INFO     | ***************************************
[2025-07-27 06:40:53] 2025-07-27 10:40:21,741 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 06:40:53] 2025-07-27 10:40:21,765 | INFO     | sufficient remaining disk space (128708509696 B)
[2025-07-27 06:40:53] 2025-07-27 10:40:21,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 06:40:53] 2025-07-27 10:40:21,766 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 06:40:53] 2025-07-27 10:40:21,766 | INFO     | update_server=False
[2025-07-27 06:40:53] 2025-07-27 10:40:21,766 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 06:40:53] 2025-07-27 10:40:21,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:40:53] 2025-07-27 10:40:21,767 | INFO     | aborting loop
[2025-07-27 06:40:53] 2025-07-27 10:40:22,302 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 06:40:53] 2025-07-27 10:40:22,323 | INFO     | all data control threads have been joined
[2025-07-27 06:40:53] 2025-07-27 10:40:22,771 | INFO     | [job] retrieve thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:22,773 | INFO     | [job] job monitor thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:22,986 | INFO     | [job] validate thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:23,022 | INFO     | all job control threads have been joined
[2025-07-27 06:40:53] 2025-07-27 10:40:23,023 | INFO     | [payload] validate_post thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:23,227 | INFO     | all payload control threads have been joined
[2025-07-27 06:40:53] 2025-07-27 10:40:23,280 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:23,328 | INFO     | [data] control thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:23,348 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:23,741 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:23,773 | INFO     | [payload] failed_post thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:23,982 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 06:40:53] 2025-07-27 10:40:24,028 | INFO     | [job] control thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:24,109 | INFO     | [data] copytool_in thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:24,120 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:24,232 | INFO     | [payload] control thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:24,309 | INFO     | [data] copytool_out thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:24,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:40:53] 2025-07-27 10:40:25,553 | INFO     | [job] queue monitor thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:27,987 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 06:40:53] 2025-07-27 10:40:29,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671903438656)>', '<ExcThread(monitor, started 139671187220224)>']
[2025-07-27 06:40:53] 2025-07-27 10:40:34,081 | INFO     | all workflow threads have been joined
[2025-07-27 06:40:53] 2025-07-27 10:40:34,081 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 06:40:53] 2025-07-27 10:40:34,081 | INFO     | traces error code: 0
[2025-07-27 06:40:53] 2025-07-27 10:40:34,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 06:40:53] 2025-07-27 10:40:52,754 | INFO     | PID=162797 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 06:40:53] 2025-07-27 10:40:52,754 | INFO     | .. there are 16 such processes running
[2025-07-27 06:40:53] 2025-07-27 10:40:52,754 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 06:40:53] 2025-07-27 10:40:52,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 06:40:53] 2025-07-27 10:40:52,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 06:40:53] 2025-07-27 10:40:52,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 06:40:53] 2025-07-27 10:40:52,755 | INFO     | [monitor] control thread has ended
[2025-07-27 06:40:53] 2025-07-27 10:40:52,998 [wrapper] ==== pilot stdout END ====
[2025-07-27 06:40:53] 2025-07-27 10:40:53,001 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 06:40:53] 2025-07-27 10:40:53,005 [wrapper] pilotpid: 162797
[2025-07-27 06:40:53] 2025-07-27 10:40:53,012 [wrapper] Pilot exit status: 0
[2025-07-27 06:40:53] 2025-07-27 10:40:53,026 [wrapper] pandaids: 6745940090
[2025-07-27 06:40:53] 2025-07-27 10:40:53,117 [wrapper] cleanup supervisor_pilot  671979 162798
[2025-07-27 06:40:53] 2025-07-27 10:40:53,121 [wrapper] Test setup, not cleaning
[2025-07-27 06:40:53] 2025-07-27 10:40:53,125 [wrapper] apfmon messages muted
[2025-07-27 06:40:53] 2025-07-27 10:40:53,130 [wrapper] ==== wrapper stdout END ====
[2025-07-27 06:40:53] 2025-07-27 10:40:53,135 [wrapper] ==== wrapper stderr END ====
[2025-07-27 06:40:53]  *** Error codes and diagnostics ***
[2025-07-27 06:40:53]     "exeErrorCode": 0,
[2025-07-27 06:40:53]     "exeErrorDiag": "",
[2025-07-27 06:40:53]     "pilotErrorCode": 0,
[2025-07-27 06:40:53]     "pilotErrorDiag": "",
[2025-07-27 06:40:53]  *** Listing of results directory ***
[2025-07-27 06:40:53] total 411676
[2025-07-27 06:40:53] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 21:31 pilot3.tar.gz
[2025-07-27 06:40:53] -rwx------. 1 boincer umatlas     36292 Jul 26 21:35 runpilot2-wrapper.sh
[2025-07-27 06:40:53] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:35 queuedata.json
[2025-07-27 06:40:53] -rw-r--r--. 1 boincer umatlas       100 Jul 27 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 06:40:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 05:01 run_atlas
[2025-07-27 06:40:53] -rw-r--r--. 1 boincer umatlas       105 Jul 27 05:01 job.xml
[2025-07-27 06:40:53] -rw-r--r--. 2 boincer umatlas 240496695 Jul 27 05:01 EVNT.45759797._000005.pool.root.1
[2025-07-27 06:40:53] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 05:01 start_atlas.sh
[2025-07-27 06:40:53] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 05:01 shared
[2025-07-27 06:40:53] -rw-r--r--. 2 boincer umatlas    542884 Jul 27 05:01 input.tar.gz
[2025-07-27 06:40:53] -rw-r--r--. 1 boincer umatlas         0 Jul 27 05:01 boinc_lockfile
[2025-07-27 06:40:53] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 05:01 pandaJob.out
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas    980109 Jul 27 05:02 agis_schedconf.cvmfs.json
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas   1593052 Jul 27 05:02 agis_ddmendpoints.agis.ALL.json
[2025-07-27 06:40:53] drwx------. 4 boincer umatlas      4096 Jul 27 05:02 pilot3
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas 175438463 Jul 27 06:39 HITS.45759799._000103.pool.root.1
[2025-07-27 06:40:53] -rw-r--r--. 1 boincer umatlas       529 Jul 27 06:39 boinc_task_state.xml
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas      1033 Jul 27 06:40 memory_monitor_summary.json
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas    305249 Jul 27 06:40 log.45759799._000103.job.log.tgz.1
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas        95 Jul 27 06:40 pilot_heartbeat.json
[2025-07-27 06:40:53] -rw-r--r--. 1 boincer umatlas      6943 Jul 27 06:40 init_data.xml
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas      7755 Jul 27 06:40 heartbeat.json
[2025-07-27 06:40:53] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 06:40 boinc_mmap_file
[2025-07-27 06:40:53] -rw-r--r--. 1 boincer umatlas        27 Jul 27 06:40 wrapper_checkpoint.txt
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas       822 Jul 27 06:40 pilotlog.txt
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas    563525 Jul 27 06:40 log.45759799._000103.job.log.1
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas       357 Jul 27 06:40 output.list
[2025-07-27 06:40:53] -rw-r--r--. 1 boincer umatlas       620 Jul 27 06:40 runtime_log
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas    890880 Jul 27 06:40 result.tar.gz
[2025-07-27 06:40:53] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 06:40 runtime_log.err
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas       653 Jul 27 06:40 dIsMDmwT5z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmj1KDmrNSfzm.diag
[2025-07-27 06:40:53] -rw-r--r--. 1 boincer umatlas     21583 Jul 27 06:40 stderr.txt
[2025-07-27 06:40:53] HITS file was successfully produced:
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas 175438463 Jul 27 06:39 shared/HITS.pool.root.1
[2025-07-27 06:40:53]  *** Contents of shared directory: ***
[2025-07-27 06:40:53] total 407620
[2025-07-27 06:40:53] -rw-r--r--. 2 boincer umatlas 240496695 Jul 27 05:01 ATLAS.root_0
[2025-07-27 06:40:53] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 05:01 start_atlas.sh
[2025-07-27 06:40:53] -rw-r--r--. 2 boincer umatlas    542884 Jul 27 05:01 input.tar.gz
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas 175438463 Jul 27 06:39 HITS.pool.root.1
[2025-07-27 06:40:53] -rw-------. 1 boincer umatlas    890880 Jul 27 06:40 result.tar.gz
06:40:54 (153236): run_atlas exited; CPU time 43896.420894
06:40:54 (153236): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN