Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:12:39 (26860): wrapper (7.7.26015): starting
05:12:39 (26860): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 05:12:39] Arguments: --nthreads 12
[2025-07-27 05:12:39] Threads: 12
[2025-07-27 05:12:39] Checking for CVMFS
[2025-07-27 05:12:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 05:12:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 05:12:39] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 05:12:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 05:12:39] 2.11.2.0 2947 111760 94744 148806 2 56 14478197 20275200 1 130560 0 37871899 99.970 9765052 9645 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 05:12:39] CVMFS is ok
[2025-07-27 05:12:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 05:12:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 05:12:39] Further information can be found at the LHC@home message board.
[2025-07-27 05:12:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 05:12:39] Checking for apptainer binary...
[2025-07-27 05:12:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 05:12:39] Running /usr/bin/apptainer --version
[2025-07-27 05:12:39] apptainer version 1.3.2-1.el7
[2025-07-27 05:12:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 05:12:41] c-205-18.aglt2.org
[2025-07-27 05:12:41] apptainer works
[2025-07-27 05:12:41] Set ATHENA_PROC_NUMBER=12
[2025-07-27 05:12:41] Set ATHENA_CORE_NUMBER=12
[2025-07-27 05:12:41] Starting ATLAS job with PandaID=6745983050
[2025-07-27 05:12:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 06:45:57]  *** The last 200 lines of the pilot log: ***
[2025-07-27 06:45:57]  is_tar=False
[2025-07-27 06:45:57]  lfn=log.45758894._000011.job.log.tgz.1
[2025-07-27 06:45:57]  mtime=0
[2025-07-27 06:45:57]  protocol_id=None
[2025-07-27 06:45:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 06:45:57]  replicas=None
[2025-07-27 06:45:57]  scope=mc23_13p6TeV
[2025-07-27 06:45:57]  status=None
[2025-07-27 06:45:57]  status_code=0
[2025-07-27 06:45:57]  storage_token=
[2025-07-27 06:45:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745983050/log.45758894._000011.job.log.tgz.1
[2025-07-27 06:45:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/68/log.45758894._000011.job.log.tgz.1
[2025-07-27 06:45:57]  workdir=None
[2025-07-27 06:45:57] ]
[2025-07-27 06:45:57] 2025-07-27 10:45:18,603 | INFO     | transferring file log.45758894._000011.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745983050/log.45758894._000011.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 06:45:57] 2025-07-27 10:45:18,604 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745983050/log.45758894._000011.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758894._000011.job
[2025-07-27 06:45:57] 2025-07-27 10:45:18,625 | INFO     | adding to output.list: log.45758894._000011.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/68/log.45758894._000011.job.log.tg
[2025-07-27 06:45:57] 2025-07-27 10:45:18,625 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 06:45:57] 2025-07-27 10:45:18,626 | INFO     | summary of transferred files:
[2025-07-27 06:45:57] 2025-07-27 10:45:18,626 | INFO     |  -- lfn=log.45758894._000011.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 06:45:57] 2025-07-27 10:45:18,626 | INFO     | stage-out finished correctly
[2025-07-27 06:45:57] 2025-07-27 10:45:18,676 | INFO     | monitor loop #413: job 0:6745983050 is in state 'finished'
[2025-07-27 06:45:57] 2025-07-27 10:45:18,676 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:45:57] 2025-07-27 10:45:19,430 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 06:45:57] 2025-07-27 10:45:19,772 | INFO     | job 6745983050 has state=finished
[2025-07-27 06:45:57] 2025-07-27 10:45:19,772 | INFO     | preparing for final server update for job 6745983050 in state='finished'
[2025-07-27 06:45:57] 2025-07-27 10:45:19,773 | INFO     | this job has now completed (state=finished)
[2025-07-27 06:45:57] 2025-07-27 10:45:19,773 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 06:45:57] 2025-07-27 10:45:19,773 | INFO     | log transfer has been attempted: DONE
[2025-07-27 06:45:57] 2025-07-27 10:45:19,773 | INFO     | job 6745983050 has finished - writing final server update
[2025-07-27 06:45:57] 2025-07-27 10:45:19,774 | INFO     | total number of processed events: 400 (read)
[2025-07-27 06:45:57] 2025-07-27 10:45:19,776 | INFO     | executing command: lscpu
[2025-07-27 06:45:57] 2025-07-27 10:45:19,803 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 06:45:57] 2025-07-27 10:45:21,179 | INFO     | monitor loop #414: job 0:6745983050 is in state 'finished'
[2025-07-27 06:45:57] 2025-07-27 10:45:21,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:45:57] 2025-07-27 10:45:23,682 | INFO     | monitor loop #415: job 0:6745983050 is in state 'finished'
[2025-07-27 06:45:57] 2025-07-27 10:45:23,683 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:45:57] 2025-07-27 10:45:24,380 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 06:45:57] 2025-07-27 10:45:24,384 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-07-27 06:45:57] 2025-07-27 10:45:24,386 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745983050/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 06:45:57] 2025-07-27 10:45:24,387 | INFO     | extracted standard info from prmon json
[2025-07-27 06:45:57] 2025-07-27 10:45:24,387 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 06:45:57] 2025-07-27 10:45:24,387 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 06:45:57] 2025-07-27 10:45:24,388 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 06:45:57] 2025-07-27 10:45:24,388 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 06:45:57] 2025-07-27 10:45:24,390 | INFO     | fitting pss+swap vs Time
[2025-07-27 06:45:57] 2025-07-27 10:45:24,390 | INFO     | sum of square deviations: 183761585.0
[2025-07-27 06:45:57] 2025-07-27 10:45:24,391 | INFO     | sum of deviations: -710288086.9999996
[2025-07-27 06:45:57] 2025-07-27 10:45:24,391 | INFO     | mean x: 1753610441.5
[2025-07-27 06:45:57] 2025-07-27 10:45:24,391 | INFO     | mean y: 2719521.119047619
[2025-07-27 06:45:57] 2025-07-27 10:45:24,391 | INFO     | -- intersect: 6780896830.790488
[2025-07-27 06:45:57] 2025-07-27 10:45:24,391 | INFO     | intersect: 6780896830.790488
[2025-07-27 06:45:57] 2025-07-27 10:45:24,391 | INFO     | chi2: 0.05054383172070859
[2025-07-27 06:45:57] 2025-07-27 10:45:24,391 | INFO     | -- intersect: 6780896830.790488
[2025-07-27 06:45:57] 2025-07-27 10:45:24,392 | INFO     | current memory leak: -3.87 B/s (using 84 data points, chi2=0.05)
[2025-07-27 06:45:57] 2025-07-27 10:45:24,392 | INFO     | could have reported an average CPU frequency of 2000 MHz (7 samples)
[2025-07-27 06:45:57] 2025-07-27 10:45:24,392 | INFO     | ..............................
[2025-07-27 06:45:57] 2025-07-27 10:45:24,392 | INFO     | . Timing measurements:
[2025-07-27 06:45:57] 2025-07-27 10:45:24,392 | INFO     | . get job = 0 s
[2025-07-27 06:45:57] 2025-07-27 10:45:24,392 | INFO     | . initial setup = 2 s
[2025-07-27 06:45:57] 2025-07-27 10:45:24,392 | INFO     | . payload setup = 9 s
[2025-07-27 06:45:57] 2025-07-27 10:45:24,393 | INFO     | . stage-in = 0 s
[2025-07-27 06:45:57] 2025-07-27 10:45:24,393 | INFO     | . payload execution = 5513 s
[2025-07-27 06:45:57] 2025-07-27 10:45:24,393 | INFO     | . stage-out = 0 s
[2025-07-27 06:45:57] 2025-07-27 10:45:24,393 | INFO     | . log creation = 0 s
[2025-07-27 06:45:57] 2025-07-27 10:45:24,393 | INFO     | ..............................
[2025-07-27 06:45:57] 2025-07-27 10:45:24,475 | INFO     | 
[2025-07-27 06:45:57] 2025-07-27 10:45:24,476 | INFO     | job summary report
[2025-07-27 06:45:57] 2025-07-27 10:45:24,476 | INFO     | --------------------------------------------------
[2025-07-27 06:45:57] 2025-07-27 10:45:24,476 | INFO     | PanDA job id: 6745983050
[2025-07-27 06:45:57] 2025-07-27 10:45:24,476 | INFO     | task id: 45758894
[2025-07-27 06:45:57] 2025-07-27 10:45:24,476 | INFO     | errors: (none)
[2025-07-27 06:45:57] 2025-07-27 10:45:24,476 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 06:45:57] 2025-07-27 10:45:24,477 | INFO     | pilot state: finished 
[2025-07-27 06:45:57] 2025-07-27 10:45:24,477 | INFO     | transexitcode: 0
[2025-07-27 06:45:57] 2025-07-27 10:45:24,477 | INFO     | exeerrorcode: 0
[2025-07-27 06:45:57] 2025-07-27 10:45:24,477 | INFO     | exeerrordiag: 
[2025-07-27 06:45:57] 2025-07-27 10:45:24,477 | INFO     | exitcode: 0
[2025-07-27 06:45:57] 2025-07-27 10:45:24,478 | INFO     | exitmsg: OK
[2025-07-27 06:45:57] 2025-07-27 10:45:24,478 | INFO     | cpuconsumptiontime: 60841 s
[2025-07-27 06:45:57] 2025-07-27 10:45:24,478 | INFO     | nevents: 400
[2025-07-27 06:45:57] 2025-07-27 10:45:24,478 | INFO     | neventsw: 0
[2025-07-27 06:45:57] 2025-07-27 10:45:24,478 | INFO     | pid: 4644
[2025-07-27 06:45:57] 2025-07-27 10:45:24,478 | INFO     | pgrp: 4644
[2025-07-27 06:45:57] 2025-07-27 10:45:24,478 | INFO     | corecount: 12
[2025-07-27 06:45:57] 2025-07-27 10:45:24,478 | INFO     | event service: False
[2025-07-27 06:45:57] 2025-07-27 10:45:24,478 | INFO     | sizes: {0: 2397450, 5: 2397712, 11: 2397768, 5526: 2424325, 5528: 2433323, 5529: 2433379, 5534: 2433701}
[2025-07-27 06:45:57] 2025-07-27 10:45:24,479 | INFO     | --------------------------------------------------
[2025-07-27 06:45:57] 2025-07-27 10:45:24,479 | INFO     | 
[2025-07-27 06:45:57] 2025-07-27 10:45:24,479 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 06:45:57] 2025-07-27 10:45:24,504 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,504 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,504 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,505 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,505 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,505 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,505 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,505 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,506 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,506 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,506 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,506 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,507 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,507 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,507 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 06:45:57] 2025-07-27 10:45:24,507 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,507 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 06:45:57] 2025-07-27 10:45:24,508 | INFO     | job 6745983050 has completed (purged errors)
[2025-07-27 06:45:57] 2025-07-27 10:45:24,508 | INFO     | overall cleanup function is called
[2025-07-27 06:45:57] 2025-07-27 10:45:24,920 | INFO     | PID=30455 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 06:45:57] 2025-07-27 10:45:25,515 | INFO     | --- collectZombieJob: --- 10, [4644]
[2025-07-27 06:45:57] 2025-07-27 10:45:25,515 | INFO     | zombie collector waiting for pid 4644
[2025-07-27 06:45:57] 2025-07-27 10:45:25,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 06:45:57] 2025-07-27 10:45:25,516 | INFO     | collected zombie processes
[2025-07-27 06:45:57] 2025-07-27 10:45:25,516 | INFO     | will attempt to kill all subprocesses of pid=4644
[2025-07-27 06:45:57] 2025-07-27 10:45:25,604 | INFO     | process IDs to be killed: [4644] (in reverse order)
[2025-07-27 06:45:57] 2025-07-27 10:45:25,655 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 06:45:57] 2025-07-27 10:45:25,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 06:45:57] 2025-07-27 10:45:25,659 | INFO     | did not find any defunct processes belonging to 4644
[2025-07-27 06:45:57] 2025-07-27 10:45:25,661 | INFO     | did not find any defunct processes belonging to 4644
[2025-07-27 06:45:57] 2025-07-27 10:45:25,662 | INFO     | ready for new job
[2025-07-27 06:45:57] 2025-07-27 10:45:25,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 06:45:57] 2025-07-27 10:45:25,663 | INFO     | ***************************************
[2025-07-27 06:45:57] 2025-07-27 10:45:25,663 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 06:45:57] 2025-07-27 10:45:25,663 | INFO     | ***************************************
[2025-07-27 06:45:57] 2025-07-27 10:45:25,663 | INFO     | 
[2025-07-27 06:45:57] 2025-07-27 10:45:25,664 | INFO     | architecture information:
[2025-07-27 06:45:57] 2025-07-27 10:45:25,664 | INFO     | executing command: cat /etc/os-release
[2025-07-27 06:45:57] 2025-07-27 10:45:25,677 | INFO     | cat /etc/os-release:
[2025-07-27 06:45:57] NAME="CentOS Linux"
[2025-07-27 06:45:57] VERSION="7 (Core)"
[2025-07-27 06:45:57] ID="centos"
[2025-07-27 06:45:57] ID_LIKE="rhel fedora"
[2025-07-27 06:45:57] VERSION_ID="7"
[2025-07-27 06:45:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 06:45:57] ANSI_COLOR="0;31"
[2025-07-27 06:45:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 06:45:57] HOME_URL="https://www.centos.org/"
[2025-07-27 06:45:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 06:45:57] 
[2025-07-27 06:45:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 06:45:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 06:45:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 06:45:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 06:45:57] 
[2025-07-27 06:45:57] 2025-07-27 10:45:25,677 | INFO     | ***************************************
[2025-07-27 06:45:57] 2025-07-27 10:45:26,180 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 06:45:57] 2025-07-27 10:45:26,198 | INFO     | sufficient remaining disk space (29370613760 B)
[2025-07-27 06:45:57] 2025-07-27 10:45:26,198 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 06:45:57] 2025-07-27 10:45:26,198 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 06:45:57] 2025-07-27 10:45:26,198 | INFO     | update_server=False
[2025-07-27 06:45:57] 2025-07-27 10:45:26,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 06:45:57] 2025-07-27 10:45:26,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:45:57] 2025-07-27 10:45:26,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 06:45:57] 2025-07-27 10:45:26,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 06:45:57] 2025-07-27 10:45:26,899 | INFO     | all data control threads have been joined
[2025-07-27 06:45:57] 2025-07-27 10:45:27,190 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:45:57] 2025-07-27 10:45:27,191 | INFO     | aborting loop
[2025-07-27 06:45:57] 2025-07-27 10:45:27,204 | INFO     | [job] retrieve thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:27,204 | INFO     | [job] queue monitor thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:27,349 | INFO     | all payload control threads have been joined
[2025-07-27 06:45:57] 2025-07-27 10:45:27,518 | INFO     | [payload] validate_post thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:27,550 | INFO     | [data] copytool_in thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:27,893 | INFO     | all job control threads have been joined
[2025-07-27 06:45:57] 2025-07-27 10:45:27,904 | INFO     | [data] control thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:27,963 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:28,153 | INFO     | [job] validate thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:28,180 | INFO     | [payload] failed_post thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:28,196 | INFO     | [job] job monitor thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:28,332 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:28,355 | INFO     | [payload] control thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:28,359 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:28,556 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:28,727 | INFO     | [data] copytool_out thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:28,898 | INFO     | [job] control thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:30,205 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 06:45:57] 2025-07-27 10:45:31,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293322270528)>', '<ExcThread(monitor, started 140292221040384)>']
[2025-07-27 06:45:57] 2025-07-27 10:45:36,625 | INFO     | all workflow threads have been joined
[2025-07-27 06:45:57] 2025-07-27 10:45:36,625 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 06:45:57] 2025-07-27 10:45:36,625 | INFO     | traces error code: 0
[2025-07-27 06:45:57] 2025-07-27 10:45:36,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 06:45:57] 2025-07-27 10:45:57,119 | INFO     | PID=30455 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 06:45:57] 2025-07-27 10:45:57,119 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 06:45:57] 2025-07-27 10:45:57,119 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 06:45:57] 2025-07-27 10:45:57,119 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 06:45:57] 2025-07-27 10:45:57,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 06:45:57] 2025-07-27 10:45:57,120 | INFO     | [monitor] control thread has ended
[2025-07-27 06:45:57] 2025-07-27 10:45:57,208 [wrapper] ==== pilot stdout END ====
[2025-07-27 06:45:57] 2025-07-27 10:45:57,212 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 06:45:57] 2025-07-27 10:45:57,216 [wrapper] pilotpid: 30455
[2025-07-27 06:45:57] 2025-07-27 10:45:57,220 [wrapper] Pilot exit status: 0
[2025-07-27 06:45:57] 2025-07-27 10:45:57,236 [wrapper] pandaids: 6745983050
[2025-07-27 06:45:57] 2025-07-27 10:45:57,283 [wrapper] cleanup supervisor_pilot 32340 30456
[2025-07-27 06:45:57] 2025-07-27 10:45:57,287 [wrapper] Test setup, not cleaning
[2025-07-27 06:45:57] 2025-07-27 10:45:57,291 [wrapper] apfmon messages muted
[2025-07-27 06:45:57] 2025-07-27 10:45:57,295 [wrapper] ==== wrapper stdout END ====
[2025-07-27 06:45:57] 2025-07-27 10:45:57,299 [wrapper] ==== wrapper stderr END ====
[2025-07-27 06:45:57]  *** Error codes and diagnostics ***
[2025-07-27 06:45:57]     "exeErrorCode": 0,
[2025-07-27 06:45:57]     "exeErrorDiag": "",
[2025-07-27 06:45:57]     "pilotErrorCode": 0,
[2025-07-27 06:45:57]     "pilotErrorDiag": "",
[2025-07-27 06:45:57]  *** Listing of results directory ***
[2025-07-27 06:45:57] total 404688
[2025-07-27 06:45:57] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 23:36 pilot3.tar.gz
[2025-07-27 06:45:57] -rwx------ 1 boincer umatlas     36292 Jul 27 00:07 runpilot2-wrapper.sh
[2025-07-27 06:45:57] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 00:07 queuedata.json
[2025-07-27 06:45:57] -rw-r--r-- 1 boincer umatlas       100 Jul 27 05:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 06:45:57] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 05:12 run_atlas
[2025-07-27 06:45:57] -rw-r--r-- 1 boincer umatlas       105 Jul 27 05:12 job.xml
[2025-07-27 06:45:57] -rw-r--r-- 2 boincer umatlas 237095550 Jul 27 05:12 EVNT.45758892._000001.pool.root.1
[2025-07-27 06:45:57] drwxrwx--x 2 boincer umatlas      4096 Jul 27 05:12 shared
[2025-07-27 06:45:57] -rw-r--r-- 2 boincer umatlas    542869 Jul 27 05:12 input.tar.gz
[2025-07-27 06:45:57] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 05:12 start_atlas.sh
[2025-07-27 06:45:57] -rw-r--r-- 1 boincer umatlas         0 Jul 27 05:12 boinc_lockfile
[2025-07-27 06:45:57] -rw-r--r-- 1 boincer umatlas      2544 Jul 27 05:12 pandaJob.out
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas    980109 Jul 27 05:12 agis_schedconf.cvmfs.json
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas   1593052 Jul 27 05:12 agis_ddmendpoints.agis.ALL.json
[2025-07-27 06:45:57] drwx------ 4 boincer umatlas      4096 Jul 27 05:12 pilot3
[2025-07-27 06:45:57] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 06:40 init_data.xml
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas 171643403 Jul 27 06:44 HITS.45758894._000011.pool.root.1
[2025-07-27 06:45:57] -rw-r--r-- 1 boincer umatlas       530 Jul 27 06:44 boinc_task_state.xml
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas        95 Jul 27 06:45 pilot_heartbeat.json
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas      1062 Jul 27 06:45 memory_monitor_summary.json
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas    372241 Jul 27 06:45 log.45758894._000011.job.log.tgz.1
[2025-07-27 06:45:57] -rw-r--r-- 1 boincer umatlas        27 Jul 27 06:45 wrapper_checkpoint.txt
[2025-07-27 06:45:57] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 06:45 boinc_mmap_file
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas      7840 Jul 27 06:45 heartbeat.json
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas       745 Jul 27 06:45 pilotlog.txt
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas    522468 Jul 27 06:45 log.45758894._000011.job.log.1
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas       357 Jul 27 06:45 output.list
[2025-07-27 06:45:57] -rw-r--r-- 1 boincer umatlas       620 Jul 27 06:45 runtime_log
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas    911360 Jul 27 06:45 result.tar.gz
[2025-07-27 06:45:57] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 06:45 runtime_log.err
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas       659 Jul 27 06:45 aLnMDmmq7z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMAULDmSKe3Zm.diag
[2025-07-27 06:45:57] -rw-r--r-- 1 boincer umatlas     21671 Jul 27 06:45 stderr.txt
[2025-07-27 06:45:57] HITS file was successfully produced:
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas 171643403 Jul 27 06:44 shared/HITS.pool.root.1
[2025-07-27 06:45:57]  *** Contents of shared directory: ***
[2025-07-27 06:45:57] total 400608
[2025-07-27 06:45:57] -rw-r--r-- 2 boincer umatlas 237095550 Jul 27 05:12 ATLAS.root_0
[2025-07-27 06:45:57] -rw-r--r-- 2 boincer umatlas    542869 Jul 27 05:12 input.tar.gz
[2025-07-27 06:45:57] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 05:12 start_atlas.sh
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas 171643403 Jul 27 06:44 HITS.pool.root.1
[2025-07-27 06:45:57] -rw------- 1 boincer umatlas    911360 Jul 27 06:45 result.tar.gz
06:45:58 (26860): run_atlas exited; CPU time 60805.533310
06:45:58 (26860): called boinc_finish(0)

</stderr_txt>
]]>

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