Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:21:02 (1846094): wrapper (7.7.26015): starting
06:21:02 (1846094): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 06:21:03] Arguments: --nthreads 12
[2025-07-27 06:21:03] Threads: 12
[2025-07-27 06:21:03] Checking for CVMFS
[2025-07-27 06:21:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 06:21:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 06:21:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 06:21:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 06:21:03] 2.12.6.0 418423 18238 318364 148809 1 64 22495908 32935936 7394 16776704 0 32514775 99.647 53608005 33433 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 06:21:03] CVMFS is ok
[2025-07-27 06:21:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 06:21:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 06:21:03] Further information can be found at the LHC@home message board.
[2025-07-27 06:21:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 06:21:03] Checking for apptainer binary...
[2025-07-27 06:21:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 06:21:03] Running /usr/bin/apptainer --version
[2025-07-27 06:21:03] apptainer version 1.4.1-1.el9
[2025-07-27 06:21:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 06:21:03] c6-1-26-2.aglt2.org
[2025-07-27 06:21:03] apptainer works
[2025-07-27 06:21:03] Set ATHENA_PROC_NUMBER=12
[2025-07-27 06:21:03] Set ATHENA_CORE_NUMBER=12
[2025-07-27 06:21:03] Starting ATLAS job with PandaID=6745982622
[2025-07-27 06:21:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 07:43:13]  *** The last 200 lines of the pilot log: ***
[2025-07-27 07:43:13]  protocol_id=None
[2025-07-27 07:43:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 07:43:13]  replicas=None
[2025-07-27 07:43:13]  scope=mc23_13p6TeV
[2025-07-27 07:43:13]  status=None
[2025-07-27 07:43:13]  status_code=0
[2025-07-27 07:43:13]  storage_token=
[2025-07-27 07:43:13]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745982622/log.45758713._000084.job.log.tgz.1
[2025-07-27 07:43:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/29/log.45758713._000084.job.log.tgz.1
[2025-07-27 07:43:13]  workdir=None
[2025-07-27 07:43:13] ]
[2025-07-27 07:43:13] 2025-07-27 11:42:33,312 | INFO     | transferring file log.45758713._000084.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745982622/log.45758713._000084.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 07:43:13] 2025-07-27 11:42:33,313 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745982622/log.45758713._000084.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758713._000084.job
[2025-07-27 07:43:13] 2025-07-27 11:42:33,336 | INFO     | adding to output.list: log.45758713._000084.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/29/log.45758713._000084.job.log.tg
[2025-07-27 07:43:13] 2025-07-27 11:42:33,337 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 07:43:13] 2025-07-27 11:42:33,338 | INFO     | summary of transferred files:
[2025-07-27 07:43:13] 2025-07-27 11:42:33,338 | INFO     |  -- lfn=log.45758713._000084.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 07:43:13] 2025-07-27 11:42:33,338 | INFO     | stage-out finished correctly
[2025-07-27 07:43:13] 2025-07-27 11:42:33,446 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 07:43:13] 2025-07-27 11:42:33,821 | INFO     | monitor loop #361: job 0:6745982622 is in state 'finished'
[2025-07-27 07:43:13] 2025-07-27 11:42:33,821 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:43:13] 2025-07-27 11:42:35,782 | INFO     | job 6745982622 has state=finished
[2025-07-27 07:43:13] 2025-07-27 11:42:35,783 | INFO     | preparing for final server update for job 6745982622 in state='finished'
[2025-07-27 07:43:13] 2025-07-27 11:42:35,783 | INFO     | this job has now completed (state=finished)
[2025-07-27 07:43:13] 2025-07-27 11:42:35,783 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 07:43:13] 2025-07-27 11:42:35,783 | INFO     | log transfer has been attempted: DONE
[2025-07-27 07:43:13] 2025-07-27 11:42:35,784 | INFO     | job 6745982622 has finished - writing final server update
[2025-07-27 07:43:13] 2025-07-27 11:42:35,784 | INFO     | total number of processed events: 400 (read)
[2025-07-27 07:43:13] 2025-07-27 11:42:35,785 | INFO     | executing command: lscpu
[2025-07-27 07:43:13] 2025-07-27 11:42:35,841 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 07:43:13] 2025-07-27 11:42:36,325 | INFO     | monitor loop #362: job 0:6745982622 is in state 'finished'
[2025-07-27 07:43:13] 2025-07-27 11:42:36,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:43:13] 2025-07-27 11:42:38,449 | INFO     | PID=1849669 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 07:43:13] 2025-07-27 11:42:38,449 | INFO     | .. there are 10 such processes running
[2025-07-27 07:43:13] 2025-07-27 11:42:38,829 | INFO     | monitor loop #363: job 0:6745982622 is in state 'finished'
[2025-07-27 07:43:13] 2025-07-27 11:42:38,829 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:43:13] 2025-07-27 11:42:40,716 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 07:43:13] 2025-07-27 11:42:40,732 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2578.6134464285715
[2025-07-27 07:43:13] 2025-07-27 11:42:40,752 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745982622/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 07:43:13] 2025-07-27 11:42:40,754 | INFO     | extracted standard info from prmon json
[2025-07-27 07:43:13] 2025-07-27 11:42:40,754 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 07:43:13] 2025-07-27 11:42:40,754 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 07:43:13] 2025-07-27 11:42:40,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 07:43:13] 2025-07-27 11:42:40,755 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 07:43:13] 2025-07-27 11:42:40,756 | INFO     | fitting pss+swap vs Time
[2025-07-27 07:43:13] 2025-07-27 11:42:40,756 | INFO     | sum of square deviations: 120605052.0
[2025-07-27 07:43:13] 2025-07-27 11:42:40,757 | INFO     | sum of deviations: -11185895252.0
[2025-07-27 07:43:13] 2025-07-27 11:42:40,757 | INFO     | mean x: 1753614208.0
[2025-07-27 07:43:13] 2025-07-27 11:42:40,757 | INFO     | mean y: 2567793.4109589043
[2025-07-27 07:43:13] 2025-07-27 11:42:40,757 | INFO     | -- intersect: 162647038467.05188
[2025-07-27 07:43:13] 2025-07-27 11:42:40,757 | INFO     | intersect: 162647038467.05188
[2025-07-27 07:43:13] 2025-07-27 11:42:40,757 | INFO     | chi2: 0.3718735746324584
[2025-07-27 07:43:13] 2025-07-27 11:42:40,758 | INFO     | -- intersect: 162647038467.05188
[2025-07-27 07:43:13] 2025-07-27 11:42:40,758 | INFO     | current memory leak: -92.75 B/s (using 73 data points, chi2=0.37)
[2025-07-27 07:43:13] 2025-07-27 11:42:40,758 | INFO     | could have reported an average CPU frequency of 2626 MHz (6 samples)
[2025-07-27 07:43:13] 2025-07-27 11:42:40,758 | INFO     | ..............................
[2025-07-27 07:43:13] 2025-07-27 11:42:40,758 | INFO     | . Timing measurements:
[2025-07-27 07:43:13] 2025-07-27 11:42:40,758 | INFO     | . get job = 0 s
[2025-07-27 07:43:13] 2025-07-27 11:42:40,758 | INFO     | . initial setup = 2 s
[2025-07-27 07:43:13] 2025-07-27 11:42:40,758 | INFO     | . payload setup = 8 s
[2025-07-27 07:43:13] 2025-07-27 11:42:40,758 | INFO     | . stage-in = 0 s
[2025-07-27 07:43:13] 2025-07-27 11:42:40,759 | INFO     | . payload execution = 4847 s
[2025-07-27 07:43:13] 2025-07-27 11:42:40,759 | INFO     | . stage-out = 0 s
[2025-07-27 07:43:13] 2025-07-27 11:42:40,759 | INFO     | . log creation = 0 s
[2025-07-27 07:43:13] 2025-07-27 11:42:40,759 | INFO     | ..............................
[2025-07-27 07:43:13] 2025-07-27 11:42:40,839 | INFO     | 
[2025-07-27 07:43:13] 2025-07-27 11:42:40,839 | INFO     | job summary report
[2025-07-27 07:43:13] 2025-07-27 11:42:40,839 | INFO     | --------------------------------------------------
[2025-07-27 07:43:13] 2025-07-27 11:42:40,839 | INFO     | PanDA job id: 6745982622
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | task id: 45758713
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | errors: (none)
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | pilot state: finished 
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | transexitcode: 0
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | exeerrorcode: 0
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | exeerrordiag: 
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | exitcode: 0
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | exitmsg: OK
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | cpuconsumptiontime: 50462 s
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | nevents: 400
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | neventsw: 0
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | pid: 1858888
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | pgrp: 1858888
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | corecount: 12
[2025-07-27 07:43:13] 2025-07-27 11:42:40,840 | INFO     | event service: False
[2025-07-27 07:43:13] 2025-07-27 11:42:40,841 | INFO     | sizes: {0: 2397461, 5: 2397723, 11: 2397779, 4859: 2423931, 4861: 2432985, 4868: 2433123}
[2025-07-27 07:43:13] 2025-07-27 11:42:40,841 | INFO     | --------------------------------------------------
[2025-07-27 07:43:13] 2025-07-27 11:42:40,841 | INFO     | 
[2025-07-27 07:43:13] 2025-07-27 11:42:40,841 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 07:43:13] 2025-07-27 11:42:40,863 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,864 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,864 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,864 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,864 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,864 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,864 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,865 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,865 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 07:43:13] 2025-07-27 11:42:40,865 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,865 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 07:43:13] 2025-07-27 11:42:40,865 | INFO     | job 6745982622 has completed (purged errors)
[2025-07-27 07:43:13] 2025-07-27 11:42:40,866 | INFO     | overall cleanup function is called
[2025-07-27 07:43:13] 2025-07-27 11:42:41,873 | INFO     | --- collectZombieJob: --- 10, [1858888]
[2025-07-27 07:43:13] 2025-07-27 11:42:41,873 | INFO     | zombie collector waiting for pid 1858888
[2025-07-27 07:43:13] 2025-07-27 11:42:41,873 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 07:43:13] 2025-07-27 11:42:41,874 | INFO     | collected zombie processes
[2025-07-27 07:43:13] 2025-07-27 11:42:41,874 | INFO     | will attempt to kill all subprocesses of pid=1858888
[2025-07-27 07:43:13] 2025-07-27 11:42:42,138 | INFO     | process IDs to be killed: [1858888] (in reverse order)
[2025-07-27 07:43:13] 2025-07-27 11:42:42,250 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 07:43:13] 2025-07-27 11:42:42,251 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 07:43:13] 2025-07-27 11:42:42,262 | INFO     | did not find any defunct processes belonging to 1858888
[2025-07-27 07:43:13] 2025-07-27 11:42:42,273 | INFO     | did not find any defunct processes belonging to 1858888
[2025-07-27 07:43:13] 2025-07-27 11:42:42,273 | INFO     | ready for new job
[2025-07-27 07:43:13] 2025-07-27 11:42:42,273 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 07:43:13] 2025-07-27 11:42:42,276 | INFO     | ***************************************
[2025-07-27 07:43:13] 2025-07-27 11:42:42,276 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 07:43:13] 2025-07-27 11:42:42,276 | INFO     | ***************************************
[2025-07-27 07:43:13] 2025-07-27 11:42:42,276 | INFO     | 
[2025-07-27 07:43:13] 2025-07-27 11:42:42,291 | INFO     | architecture information:
[2025-07-27 07:43:13] 2025-07-27 11:42:42,291 | INFO     | executing command: cat /etc/os-release
[2025-07-27 07:43:13] 2025-07-27 11:42:42,308 | INFO     | cat /etc/os-release:
[2025-07-27 07:43:13] NAME="CentOS Linux"
[2025-07-27 07:43:13] VERSION="7 (Core)"
[2025-07-27 07:43:13] ID="centos"
[2025-07-27 07:43:13] ID_LIKE="rhel fedora"
[2025-07-27 07:43:13] VERSION_ID="7"
[2025-07-27 07:43:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 07:43:13] ANSI_COLOR="0;31"
[2025-07-27 07:43:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 07:43:13] HOME_URL="https://www.centos.org/"
[2025-07-27 07:43:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 07:43:13] 
[2025-07-27 07:43:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 07:43:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 07:43:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 07:43:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 07:43:13] 
[2025-07-27 07:43:13] 2025-07-27 11:42:42,309 | INFO     | ***************************************
[2025-07-27 07:43:13] 2025-07-27 11:42:42,812 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 07:43:13] 2025-07-27 11:42:42,829 | INFO     | sufficient remaining disk space (76287049728 B)
[2025-07-27 07:43:13] 2025-07-27 11:42:42,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 07:43:13] 2025-07-27 11:42:42,831 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 07:43:13] 2025-07-27 11:42:42,831 | INFO     | update_server=False
[2025-07-27 07:43:13] 2025-07-27 11:42:42,831 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 07:43:13] 2025-07-27 11:42:42,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 07:43:13] 2025-07-27 11:42:42,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 07:43:13] 2025-07-27 11:42:42,832 | INFO     | aborting loop
[2025-07-27 07:43:13] 2025-07-27 11:42:42,865 | INFO     | all job control threads have been joined
[2025-07-27 07:43:13] 2025-07-27 11:42:43,169 | INFO     | all data control threads have been joined
[2025-07-27 07:43:13] 2025-07-27 11:42:43,766 | INFO     | all payload control threads have been joined
[2025-07-27 07:43:13] 2025-07-27 11:42:43,836 | INFO     | [job] retrieve thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:43,837 | INFO     | [job] queue monitor thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:43,837 | INFO     | [job] job monitor thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:43,870 | INFO     | [job] control thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:43,957 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 07:43:13] 2025-07-27 11:42:44,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 07:43:13] 2025-07-27 11:42:44,174 | INFO     | [data] control thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:44,459 | INFO     | [data] copytool_in thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:44,572 | INFO     | [payload] validate_post thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:44,725 | INFO     | [job] validate thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:44,771 | INFO     | [payload] control thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:45,019 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:45,089 | INFO     | [payload] failed_post thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:45,183 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:45,299 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:45,962 | INFO     | [data] copytool_out thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:48,065 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:53,360 | INFO     | job.realtimelogging is not enabled
[2025-07-27 07:43:13] 2025-07-27 11:42:54,366 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 07:43:13] 2025-07-27 11:42:55,352 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140442462676800)>', '<ExcThread(monitor, started 140442091886336)>']
[2025-07-27 07:43:13] 2025-07-27 11:43:00,378 | INFO     | all workflow threads have been joined
[2025-07-27 07:43:13] 2025-07-27 11:43:00,379 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 07:43:13] 2025-07-27 11:43:00,380 | INFO     | traces error code: 0
[2025-07-27 07:43:13] 2025-07-27 11:43:00,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 07:43:13] 2025-07-27 11:43:12,880 | INFO     | PID=1849669 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 07:43:13] 2025-07-27 11:43:12,881 | INFO     | .. there are 10 such processes running
[2025-07-27 07:43:13] 2025-07-27 11:43:12,882 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 07:43:13] 2025-07-27 11:43:12,882 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 07:43:13] 2025-07-27 11:43:12,882 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 07:43:13] 2025-07-27 11:43:12,882 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 07:43:13] 2025-07-27 11:43:12,883 | INFO     | [monitor] control thread has ended
[2025-07-27 07:43:13] 2025-07-27 11:43:13,104 [wrapper] ==== pilot stdout END ====
[2025-07-27 07:43:13] 2025-07-27 11:43:13,108 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 07:43:13] 2025-07-27 11:43:13,112 [wrapper] pilotpid: 1849669
[2025-07-27 07:43:13] 2025-07-27 11:43:13,116 [wrapper] Pilot exit status: 0
[2025-07-27 07:43:13] 2025-07-27 11:43:13,129 [wrapper] pandaids: 6745982622
[2025-07-27 07:43:13] 2025-07-27 11:43:13,209 [wrapper] cleanup supervisor_pilot 2104434 1849670
[2025-07-27 07:43:13] 2025-07-27 11:43:13,213 [wrapper] Test setup, not cleaning
[2025-07-27 07:43:13] 2025-07-27 11:43:13,218 [wrapper] apfmon messages muted
[2025-07-27 07:43:13] 2025-07-27 11:43:13,221 [wrapper] ==== wrapper stdout END ====
[2025-07-27 07:43:13] 2025-07-27 11:43:13,226 [wrapper] ==== wrapper stderr END ====
[2025-07-27 07:43:13]  *** Error codes and diagnostics ***
[2025-07-27 07:43:13]     "exeErrorCode": 0,
[2025-07-27 07:43:13]     "exeErrorDiag": "",
[2025-07-27 07:43:13]     "pilotErrorCode": 0,
[2025-07-27 07:43:13]     "pilotErrorDiag": "",
[2025-07-27 07:43:13]  *** Listing of results directory ***
[2025-07-27 07:43:13] total 408084
[2025-07-27 07:43:13] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 23:36 pilot3.tar.gz
[2025-07-27 07:43:13] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 00:02 queuedata.json
[2025-07-27 07:43:13] -rwx------. 1 boincer umatlas     36292 Jul 27 00:02 runpilot2-wrapper.sh
[2025-07-27 07:43:13] -rw-r--r--. 1 boincer umatlas       100 Jul 27 06:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 07:43:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 06:21 run_atlas
[2025-07-27 07:43:13] -rw-r--r--. 1 boincer umatlas       105 Jul 27 06:21 job.xml
[2025-07-27 07:43:13] -rw-r--r--. 2 boincer umatlas 241433415 Jul 27 06:21 EVNT.45758711._000004.pool.root.1
[2025-07-27 07:43:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 06:21 start_atlas.sh
[2025-07-27 07:43:13] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 06:21 shared
[2025-07-27 07:43:13] -rw-r--r--. 2 boincer umatlas    542873 Jul 27 06:21 input.tar.gz
[2025-07-27 07:43:13] -rw-r--r--. 1 boincer umatlas         0 Jul 27 06:21 boinc_lockfile
[2025-07-27 07:43:13] -rw-r--r--. 1 boincer umatlas      2554 Jul 27 06:21 pandaJob.out
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas    980117 Jul 27 06:21 agis_schedconf.cvmfs.json
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas   1593052 Jul 27 06:21 agis_ddmendpoints.agis.ALL.json
[2025-07-27 07:43:13] drwx------. 4 boincer umatlas      4096 Jul 27 06:21 pilot3
[2025-07-27 07:43:13] -rw-r--r--. 1 boincer umatlas      6843 Jul 27 07:40 init_data.xml
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas 170867860 Jul 27 07:41 HITS.45758713._000084.pool.root.1
[2025-07-27 07:43:13] -rw-r--r--. 1 boincer umatlas       529 Jul 27 07:42 boinc_task_state.xml
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas      1033 Jul 27 07:42 memory_monitor_summary.json
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas    365401 Jul 27 07:42 log.45758713._000084.job.log.tgz.1
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas      7809 Jul 27 07:42 heartbeat.json
[2025-07-27 07:43:13] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 07:43 boinc_mmap_file
[2025-07-27 07:43:13] -rw-r--r--. 1 boincer umatlas        27 Jul 27 07:43 wrapper_checkpoint.txt
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas        95 Jul 27 07:43 pilot_heartbeat.json
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas       823 Jul 27 07:43 pilotlog.txt
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas    483508 Jul 27 07:43 log.45758713._000084.job.log.1
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas       357 Jul 27 07:43 output.list
[2025-07-27 07:43:13] -rw-r--r--. 1 boincer umatlas       620 Jul 27 07:43 runtime_log
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas    870400 Jul 27 07:43 result.tar.gz
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas       656 Jul 27 07:43 xdfMDmtl7z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmg9TLDmf58egm.diag
[2025-07-27 07:43:13] -rw-r--r--. 1 boincer umatlas      8667 Jul 27 07:43 runtime_log.err
[2025-07-27 07:43:13] -rw-r--r--. 1 boincer umatlas     21875 Jul 27 07:43 stderr.txt
[2025-07-27 07:43:13] HITS file was successfully produced:
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas 170867860 Jul 27 07:41 shared/HITS.pool.root.1
[2025-07-27 07:43:13]  *** Contents of shared directory: ***
[2025-07-27 07:43:13] total 404044
[2025-07-27 07:43:13] -rw-r--r--. 2 boincer umatlas 241433415 Jul 27 06:21 ATLAS.root_0
[2025-07-27 07:43:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 06:21 start_atlas.sh
[2025-07-27 07:43:13] -rw-r--r--. 2 boincer umatlas    542873 Jul 27 06:21 input.tar.gz
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas 170867860 Jul 27 07:41 HITS.pool.root.1
[2025-07-27 07:43:13] -rw-------. 1 boincer umatlas    870400 Jul 27 07:43 result.tar.gz
07:43:14 (1846094): run_atlas exited; CPU time 50515.014622
07:43:14 (1846094): called boinc_finish(0)

</stderr_txt>
]]>

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