Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:01:06 (1769771): wrapper (7.7.26015): starting
05:01:06 (1769771): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 05:01:06] Arguments: --nthreads 8
[2025-07-27 05:01:06] Threads: 8
[2025-07-27 05:01:06] Checking for CVMFS
[2025-07-27 05:01:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 05:01:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 05:01:06] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 05:01:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 05:01:06] 2.13.1.0 375772 14209 233808 148805 1 196 35531827 40960001 10242 16776704 0 71934535 99.759 69958795 40671 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 05:01:06] CVMFS is ok
[2025-07-27 05:01:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 05:01:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 05:01:06] Further information can be found at the LHC@home message board.
[2025-07-27 05:01:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 05:01:06] Checking for apptainer binary...
[2025-07-27 05:01:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 05:01:06] Running /usr/bin/apptainer --version
[2025-07-27 05:01:06] apptainer version 1.4.1-1.el9
[2025-07-27 05:01:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 05:01:06] c-212-1.aglt2.org
[2025-07-27 05:01:06] apptainer works
[2025-07-27 05:01:06] Set ATHENA_PROC_NUMBER=8
[2025-07-27 05:01:06] Set ATHENA_CORE_NUMBER=8
[2025-07-27 05:01:06] Starting ATLAS job with PandaID=6745939233
[2025-07-27 05:01:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 06:28:45]  *** The last 200 lines of the pilot log: ***
[2025-07-27 06:28:45]  replicas=None
[2025-07-27 06:28:45]  scope=mc23_13p6TeV
[2025-07-27 06:28:45]  status=None
[2025-07-27 06:28:45]  status_code=0
[2025-07-27 06:28:45]  storage_token=
[2025-07-27 06:28:45]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6745939233/log.45758350._000038.job.log.tgz.1
[2025-07-27 06:28:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/5c/log.45758350._000038.job.log.tgz.1
[2025-07-27 06:28:45]  workdir=None
[2025-07-27 06:28:45] ]
[2025-07-27 06:28:45] 2025-07-27 10:28:05,445 | INFO     | transferring file log.45758350._000038.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6745939233/log.45758350._000038.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 06:28:45] 2025-07-27 10:28:05,445 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6745939233/log.45758350._000038.job.log.tgz.1 /tmp/boinchome/slots/8/log.45758350._000038.job
[2025-07-27 06:28:45] 2025-07-27 10:28:05,463 | INFO     | adding to output.list: log.45758350._000038.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/5c/log.45758350._000038.job.log.tg
[2025-07-27 06:28:45] 2025-07-27 10:28:05,464 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 06:28:45] 2025-07-27 10:28:05,464 | INFO     | summary of transferred files:
[2025-07-27 06:28:45] 2025-07-27 10:28:05,464 | INFO     |  -- lfn=log.45758350._000038.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 06:28:45] 2025-07-27 10:28:05,464 | INFO     | stage-out finished correctly
[2025-07-27 06:28:45] 2025-07-27 10:28:05,564 | INFO     | monitor loop #380: job 0:6745939233 is in state 'finished'
[2025-07-27 06:28:45] 2025-07-27 10:28:05,564 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:28:45] 2025-07-27 10:28:06,360 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 06:28:45] 2025-07-27 10:28:08,066 | INFO     | monitor loop #381: job 0:6745939233 is in state 'finished'
[2025-07-27 06:28:45] 2025-07-27 10:28:08,067 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:28:45] 2025-07-27 10:28:08,444 | INFO     | job 6745939233 has state=finished
[2025-07-27 06:28:45] 2025-07-27 10:28:08,444 | INFO     | preparing for final server update for job 6745939233 in state='finished'
[2025-07-27 06:28:45] 2025-07-27 10:28:08,445 | INFO     | this job has now completed (state=finished)
[2025-07-27 06:28:45] 2025-07-27 10:28:08,445 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 06:28:45] 2025-07-27 10:28:08,445 | INFO     | log transfer has been attempted: DONE
[2025-07-27 06:28:45] 2025-07-27 10:28:08,445 | INFO     | job 6745939233 has finished - writing final server update
[2025-07-27 06:28:45] 2025-07-27 10:28:08,446 | INFO     | total number of processed events: 400 (read)
[2025-07-27 06:28:45] 2025-07-27 10:28:08,448 | INFO     | executing command: lscpu
[2025-07-27 06:28:45] 2025-07-27 10:28:08,507 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 06:28:45] 2025-07-27 10:28:10,571 | INFO     | monitor loop #382: job 0:6745939233 is in state 'finished'
[2025-07-27 06:28:45] 2025-07-27 10:28:10,571 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:28:45] 2025-07-27 10:28:13,074 | INFO     | monitor loop #383: job 0:6745939233 is in state 'finished'
[2025-07-27 06:28:45] 2025-07-27 10:28:13,075 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:28:45] 2025-07-27 10:28:13,352 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 06:28:45] 2025-07-27 10:28:13,357 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3289.1263854166677
[2025-07-27 06:28:45] 2025-07-27 10:28:13,370 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6745939233/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 06:28:45] 2025-07-27 10:28:13,370 | INFO     | extracted standard info from prmon json
[2025-07-27 06:28:45] 2025-07-27 10:28:13,370 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 06:28:45] 2025-07-27 10:28:13,370 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 06:28:45] 2025-07-27 10:28:13,370 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 06:28:45] 2025-07-27 10:28:13,370 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 06:28:45] 2025-07-27 10:28:13,372 | INFO     | fitting pss+swap vs Time
[2025-07-27 06:28:45] 2025-07-27 10:28:13,372 | INFO     | sum of square deviations: 147126479.5
[2025-07-27 06:28:45] 2025-07-27 10:28:13,372 | INFO     | sum of deviations: 654077532.5000001
[2025-07-27 06:28:45] 2025-07-27 10:28:13,372 | INFO     | mean x: 1753609565.5
[2025-07-27 06:28:45] 2025-07-27 10:28:13,372 | INFO     | mean y: 2514594.294871795
[2025-07-27 06:28:45] 2025-07-27 10:28:13,372 | INFO     | -- intersect: -7793475777.177569
[2025-07-27 06:28:45] 2025-07-27 10:28:13,372 | INFO     | intersect: -7793475777.177569
[2025-07-27 06:28:45] 2025-07-27 10:28:13,372 | INFO     | chi2: 0.000574770928079495
[2025-07-27 06:28:45] 2025-07-27 10:28:13,373 | INFO     | -- intersect: -7793475777.177569
[2025-07-27 06:28:45] 2025-07-27 10:28:13,373 | INFO     | current memory leak: 4.45 B/s (using 78 data points, chi2=0.00)
[2025-07-27 06:28:45] 2025-07-27 10:28:13,373 | INFO     | could have reported an average CPU frequency of 3269 MHz (6 samples)
[2025-07-27 06:28:45] 2025-07-27 10:28:13,373 | INFO     | ..............................
[2025-07-27 06:28:45] 2025-07-27 10:28:13,373 | INFO     | . Timing measurements:
[2025-07-27 06:28:45] 2025-07-27 10:28:13,373 | INFO     | . get job = 0 s
[2025-07-27 06:28:45] 2025-07-27 10:28:13,373 | INFO     | . initial setup = 2 s
[2025-07-27 06:28:45] 2025-07-27 10:28:13,373 | INFO     | . payload setup = 8 s
[2025-07-27 06:28:45] 2025-07-27 10:28:13,373 | INFO     | . stage-in = 0 s
[2025-07-27 06:28:45] 2025-07-27 10:28:13,373 | INFO     | . payload execution = 5176 s
[2025-07-27 06:28:45] 2025-07-27 10:28:13,373 | INFO     | . stage-out = 0 s
[2025-07-27 06:28:45] 2025-07-27 10:28:13,374 | INFO     | . log creation = 0 s
[2025-07-27 06:28:45] 2025-07-27 10:28:13,374 | INFO     | ..............................
[2025-07-27 06:28:45] 2025-07-27 10:28:13,433 | INFO     | 
[2025-07-27 06:28:45] 2025-07-27 10:28:13,434 | INFO     | job summary report
[2025-07-27 06:28:45] 2025-07-27 10:28:13,434 | INFO     | --------------------------------------------------
[2025-07-27 06:28:45] 2025-07-27 10:28:13,434 | INFO     | PanDA job id: 6745939233
[2025-07-27 06:28:45] 2025-07-27 10:28:13,434 | INFO     | task id: 45758350
[2025-07-27 06:28:45] 2025-07-27 10:28:13,434 | INFO     | errors: (none)
[2025-07-27 06:28:45] 2025-07-27 10:28:13,434 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 06:28:45] 2025-07-27 10:28:13,434 | INFO     | pilot state: finished 
[2025-07-27 06:28:45] 2025-07-27 10:28:13,434 | INFO     | transexitcode: 0
[2025-07-27 06:28:45] 2025-07-27 10:28:13,434 | INFO     | exeerrorcode: 0
[2025-07-27 06:28:45] 2025-07-27 10:28:13,434 | INFO     | exeerrordiag: 
[2025-07-27 06:28:45] 2025-07-27 10:28:13,434 | INFO     | exitcode: 0
[2025-07-27 06:28:45] 2025-07-27 10:28:13,434 | INFO     | exitmsg: OK
[2025-07-27 06:28:45] 2025-07-27 10:28:13,434 | INFO     | cpuconsumptiontime: 37630 s
[2025-07-27 06:28:45] 2025-07-27 10:28:13,435 | INFO     | nevents: 400
[2025-07-27 06:28:45] 2025-07-27 10:28:13,435 | INFO     | neventsw: 0
[2025-07-27 06:28:45] 2025-07-27 10:28:13,435 | INFO     | pid: 1779823
[2025-07-27 06:28:45] 2025-07-27 10:28:13,435 | INFO     | pgrp: 1779823
[2025-07-27 06:28:45] 2025-07-27 10:28:13,435 | INFO     | corecount: 8
[2025-07-27 06:28:45] 2025-07-27 10:28:13,435 | INFO     | event service: False
[2025-07-27 06:28:45] 2025-07-27 10:28:13,435 | INFO     | sizes: {0: 2397313, 1: 2397512, 6: 2397774, 11: 2397802, 5189: 2433017, 5190: 2433017, 5197: 2433339}
[2025-07-27 06:28:45] 2025-07-27 10:28:13,435 | INFO     | --------------------------------------------------
[2025-07-27 06:28:45] 2025-07-27 10:28:13,435 | INFO     | 
[2025-07-27 06:28:45] 2025-07-27 10:28:13,435 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-07-27 06:28:45] 2025-07-27 10:28:13,458 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,458 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,458 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,458 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,458 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,459 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,459 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,459 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,459 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,459 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,459 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,459 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,459 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,459 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,459 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,459 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 06:28:45] 2025-07-27 10:28:13,460 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,460 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 06:28:45] 2025-07-27 10:28:13,460 | INFO     | job 6745939233 has completed (purged errors)
[2025-07-27 06:28:45] 2025-07-27 10:28:13,460 | INFO     | overall cleanup function is called
[2025-07-27 06:28:45] 2025-07-27 10:28:14,467 | INFO     | --- collectZombieJob: --- 10, [1779823]
[2025-07-27 06:28:45] 2025-07-27 10:28:14,468 | INFO     | zombie collector waiting for pid 1779823
[2025-07-27 06:28:45] 2025-07-27 10:28:14,468 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 06:28:45] 2025-07-27 10:28:14,468 | INFO     | collected zombie processes
[2025-07-27 06:28:45] 2025-07-27 10:28:14,468 | INFO     | will attempt to kill all subprocesses of pid=1779823
[2025-07-27 06:28:45] 2025-07-27 10:28:14,837 | INFO     | process IDs to be killed: [1779823] (in reverse order)
[2025-07-27 06:28:45] 2025-07-27 10:28:14,962 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 06:28:45] 2025-07-27 10:28:14,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 06:28:45] 2025-07-27 10:28:14,977 | INFO     | did not find any defunct processes belonging to 1779823
[2025-07-27 06:28:45] 2025-07-27 10:28:14,987 | INFO     | did not find any defunct processes belonging to 1779823
[2025-07-27 06:28:45] 2025-07-27 10:28:14,988 | INFO     | ready for new job
[2025-07-27 06:28:45] 2025-07-27 10:28:14,988 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 06:28:45] 2025-07-27 10:28:14,989 | INFO     | ***************************************
[2025-07-27 06:28:45] 2025-07-27 10:28:14,990 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 06:28:45] 2025-07-27 10:28:14,990 | INFO     | ***************************************
[2025-07-27 06:28:45] 2025-07-27 10:28:14,990 | INFO     | 
[2025-07-27 06:28:45] 2025-07-27 10:28:14,994 | INFO     | architecture information:
[2025-07-27 06:28:45] 2025-07-27 10:28:14,995 | INFO     | executing command: cat /etc/os-release
[2025-07-27 06:28:45] 2025-07-27 10:28:15,012 | INFO     | cat /etc/os-release:
[2025-07-27 06:28:45] NAME="CentOS Linux"
[2025-07-27 06:28:45] VERSION="7 (Core)"
[2025-07-27 06:28:45] ID="centos"
[2025-07-27 06:28:45] ID_LIKE="rhel fedora"
[2025-07-27 06:28:45] VERSION_ID="7"
[2025-07-27 06:28:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 06:28:45] ANSI_COLOR="0;31"
[2025-07-27 06:28:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 06:28:45] HOME_URL="https://www.centos.org/"
[2025-07-27 06:28:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 06:28:45] 
[2025-07-27 06:28:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 06:28:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 06:28:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 06:28:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 06:28:45] 
[2025-07-27 06:28:45] 2025-07-27 10:28:15,012 | INFO     | ***************************************
[2025-07-27 06:28:45] 2025-07-27 10:28:15,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-07-27 06:28:45] 2025-07-27 10:28:15,534 | INFO     | sufficient remaining disk space (123617673216 B)
[2025-07-27 06:28:45] 2025-07-27 10:28:15,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 06:28:45] 2025-07-27 10:28:15,534 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 06:28:45] 2025-07-27 10:28:15,534 | INFO     | update_server=False
[2025-07-27 06:28:45] 2025-07-27 10:28:15,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 06:28:45] 2025-07-27 10:28:15,578 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 06:28:45] 2025-07-27 10:28:15,579 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 06:28:45] 2025-07-27 10:28:15,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:28:45] 2025-07-27 10:28:15,579 | INFO     | will abort loop
[2025-07-27 06:28:45] 2025-07-27 10:28:15,911 | INFO     | all data control threads have been joined
[2025-07-27 06:28:45] 2025-07-27 10:28:16,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 06:28:45] 2025-07-27 10:28:16,507 | INFO     | all payload control threads have been joined
[2025-07-27 06:28:45] 2025-07-27 10:28:16,540 | INFO     | [job] retrieve thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:16,584 | INFO     | [job] job monitor thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:16,847 | INFO     | all job control threads have been joined
[2025-07-27 06:28:45] 2025-07-27 10:28:16,918 | INFO     | [data] control thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:16,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 06:28:45] 2025-07-27 10:28:16,961 | INFO     | [job] validate thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:16,978 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:16,980 | INFO     | [data] copytool_in thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:16,992 | INFO     | [payload] validate_post thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:17,467 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:17,483 | INFO     | [payload] failed_post thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:17,513 | INFO     | [payload] control thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:17,706 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:17,852 | INFO     | [job] control thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:18,038 | INFO     | [data] copytool_out thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:18,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:28:45] 2025-07-27 10:28:19,448 | INFO     | [job] queue monitor thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:20,951 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:26,578 | INFO     | job.realtimelogging is not enabled
[2025-07-27 06:28:45] 2025-07-27 10:28:27,585 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 06:28:45] 2025-07-27 10:28:29,373 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140287043086144)>', '<ExcThread(monitor, started 140286038632192)>']
[2025-07-27 06:28:45] 2025-07-27 10:28:34,381 | INFO     | all workflow threads have been joined
[2025-07-27 06:28:45] 2025-07-27 10:28:34,381 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 06:28:45] 2025-07-27 10:28:34,382 | INFO     | traces error code: 0
[2025-07-27 06:28:45] 2025-07-27 10:28:34,382 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 06:28:45] 2025-07-27 10:28:45,128 | INFO     | PID=1773353 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 06:28:45] 2025-07-27 10:28:45,128 | INFO     | .. there are 13 such processes running
[2025-07-27 06:28:45] 2025-07-27 10:28:45,128 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 06:28:45] 2025-07-27 10:28:45,128 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 06:28:45] 2025-07-27 10:28:45,128 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 06:28:45] 2025-07-27 10:28:45,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 06:28:45] 2025-07-27 10:28:45,129 | INFO     | [monitor] control thread has ended
[2025-07-27 06:28:45] 2025-07-27 10:28:45,298 [wrapper] ==== pilot stdout END ====
[2025-07-27 06:28:45] 2025-07-27 10:28:45,301 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 06:28:45] 2025-07-27 10:28:45,304 [wrapper] pilotpid: 1773353
[2025-07-27 06:28:45] 2025-07-27 10:28:45,307 [wrapper] Pilot exit status: 0
[2025-07-27 06:28:45] 2025-07-27 10:28:45,321 [wrapper] pandaids: 6745939233
[2025-07-27 06:28:45] 2025-07-27 10:28:45,406 [wrapper] cleanup supervisor_pilot 2039816 1773354
[2025-07-27 06:28:45] 2025-07-27 10:28:45,409 [wrapper] Test setup, not cleaning
[2025-07-27 06:28:45] 2025-07-27 10:28:45,412 [wrapper] apfmon messages muted
[2025-07-27 06:28:45] 2025-07-27 10:28:45,415 [wrapper] ==== wrapper stdout END ====
[2025-07-27 06:28:45] 2025-07-27 10:28:45,417 [wrapper] ==== wrapper stderr END ====
[2025-07-27 06:28:45]  *** Error codes and diagnostics ***
[2025-07-27 06:28:45]     "exeErrorCode": 0,
[2025-07-27 06:28:45]     "exeErrorDiag": "",
[2025-07-27 06:28:45]     "pilotErrorCode": 0,
[2025-07-27 06:28:45]     "pilotErrorDiag": "",
[2025-07-27 06:28:45]  *** Listing of results directory ***
[2025-07-27 06:28:45] total 408932
[2025-07-27 06:28:45] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 21:08 pilot3.tar.gz
[2025-07-27 06:28:45] -rwx------. 1 boincer umatlas     36292 Jul 26 21:13 runpilot2-wrapper.sh
[2025-07-27 06:28:45] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:13 queuedata.json
[2025-07-27 06:28:45] -rw-r--r--. 1 boincer umatlas       100 Jul 27 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 06:28:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 05:01 run_atlas
[2025-07-27 06:28:45] -rw-r--r--. 1 boincer umatlas       105 Jul 27 05:01 job.xml
[2025-07-27 06:28:45] -rw-r--r--. 2 boincer umatlas 242115241 Jul 27 05:01 EVNT.45758348._000002.pool.root.1
[2025-07-27 06:28:45] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 05:01 start_atlas.sh
[2025-07-27 06:28:45] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 05:01 shared
[2025-07-27 06:28:45] -rw-r--r--. 2 boincer umatlas    542887 Jul 27 05:01 input.tar.gz
[2025-07-27 06:28:45] -rw-r--r--. 1 boincer umatlas         0 Jul 27 05:01 boinc_lockfile
[2025-07-27 06:28:45] -rw-r--r--. 1 boincer umatlas      2577 Jul 27 05:01 pandaJob.out
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas    980109 Jul 27 05:01 agis_schedconf.cvmfs.json
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas   1593052 Jul 27 05:01 agis_ddmendpoints.agis.ALL.json
[2025-07-27 06:28:45] drwx------. 4 boincer umatlas      4096 Jul 27 05:01 pilot3
[2025-07-27 06:28:45] -rw-r--r--. 1 boincer umatlas      6945 Jul 27 06:20 init_data.xml
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas 171123153 Jul 27 06:27 HITS.45758350._000038.pool.root.1
[2025-07-27 06:28:45] -rw-r--r--. 1 boincer umatlas       529 Jul 27 06:27 boinc_task_state.xml
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas      1026 Jul 27 06:28 memory_monitor_summary.json
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas    310103 Jul 27 06:28 log.45758350._000038.job.log.tgz.1
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas        95 Jul 27 06:28 pilot_heartbeat.json
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas      7749 Jul 27 06:28 heartbeat.json
[2025-07-27 06:28:45] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 06:28 boinc_mmap_file
[2025-07-27 06:28:45] -rw-r--r--. 1 boincer umatlas        27 Jul 27 06:28 wrapper_checkpoint.txt
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas       823 Jul 27 06:28 pilotlog.txt
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas    504035 Jul 27 06:28 log.45758350._000038.job.log.1
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas       357 Jul 27 06:28 output.list
[2025-07-27 06:28:45] -rw-r--r--. 1 boincer umatlas       620 Jul 27 06:28 runtime_log
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas    829440 Jul 27 06:28 result.tar.gz
[2025-07-27 06:28:45] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 06:28 runtime_log.err
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas       650 Jul 27 06:28 mvyNDmn84z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSmTLDmJ8EzJn.diag
[2025-07-27 06:28:45] -rw-r--r--. 1 boincer umatlas     21859 Jul 27 06:28 stderr.txt
[2025-07-27 06:28:45] HITS file was successfully produced:
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas 171123153 Jul 27 06:27 shared/HITS.pool.root.1
[2025-07-27 06:28:45]  *** Contents of shared directory: ***
[2025-07-27 06:28:45] total 404928
[2025-07-27 06:28:45] -rw-r--r--. 2 boincer umatlas 242115241 Jul 27 05:01 ATLAS.root_0
[2025-07-27 06:28:45] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 05:01 start_atlas.sh
[2025-07-27 06:28:45] -rw-r--r--. 2 boincer umatlas    542887 Jul 27 05:01 input.tar.gz
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas 171123153 Jul 27 06:27 HITS.pool.root.1
[2025-07-27 06:28:45] -rw-------. 1 boincer umatlas    829440 Jul 27 06:28 result.tar.gz
06:28:47 (1769771): run_atlas exited; CPU time 37772.622987
06:28:47 (1769771): called boinc_finish(0)

</stderr_txt>
]]>

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