Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:02:40 (1925665): wrapper (7.7.26015): starting
05:02:40 (1925665): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 05:02:40] Arguments: --nthreads 8
[2025-07-27 05:02:40] Threads: 8
[2025-07-27 05:02:40] Checking for CVMFS
[2025-07-27 05:02:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 05:02:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 05:02:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 05:02:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 05:02:41] 2.13.1.0 285388 8169 92484 148805 0 188 11202656 40960001 12855 16776704 0 110493197 99.999 320249 31390 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 05:02:41] CVMFS is ok
[2025-07-27 05:02:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 05:02:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 05:02:41] Further information can be found at the LHC@home message board.
[2025-07-27 05:02:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 05:02:41] Checking for apptainer binary...
[2025-07-27 05:02:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 05:02:41] Running /usr/bin/apptainer --version
[2025-07-27 05:02:41] apptainer version 1.4.1-1.el9
[2025-07-27 05:02:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 05:02:41] c-208-36.aglt2.org
[2025-07-27 05:02:41] apptainer works
[2025-07-27 05:02:41] Set ATHENA_PROC_NUMBER=8
[2025-07-27 05:02:41] Set ATHENA_CORE_NUMBER=8
[2025-07-27 05:02:41] Starting ATLAS job with PandaID=6745938976
[2025-07-27 05:02:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 06:05:24]  *** The last 200 lines of the pilot log: ***
[2025-07-27 06:05:24]  lfn=log.45758392._000029.job.log.tgz.1
[2025-07-27 06:05:24]  mtime=0
[2025-07-27 06:05:24]  protocol_id=None
[2025-07-27 06:05:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 06:05:24]  replicas=None
[2025-07-27 06:05:24]  scope=mc23_13p6TeV
[2025-07-27 06:05:24]  status=None
[2025-07-27 06:05:24]  status_code=0
[2025-07-27 06:05:24]  storage_token=
[2025-07-27 06:05:24]  surl=/tmp/boinchome/slots/14/PanDA_Pilot-6745938976/log.45758392._000029.job.log.tgz.1
[2025-07-27 06:05:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/67/log.45758392._000029.job.log.tgz.1
[2025-07-27 06:05:24]  workdir=None
[2025-07-27 06:05:24] ]
[2025-07-27 06:05:24] 2025-07-27 10:04:35,497 | INFO     | transferring file log.45758392._000029.job.log.tgz.1 from /tmp/boinchome/slots/14/PanDA_Pilot-6745938976/log.45758392._000029.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-27 06:05:24] 2025-07-27 10:04:35,498 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/14/PanDA_Pilot-6745938976/log.45758392._000029.job.log.tgz.1 /tmp/boinchome/slots/14/log.45758392._000029.j
[2025-07-27 06:05:24] 2025-07-27 10:04:35,512 | INFO     | adding to output.list: log.45758392._000029.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/67/log.45758392._000029.job.log.tg
[2025-07-27 06:05:24] 2025-07-27 10:04:35,513 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 06:05:24] 2025-07-27 10:04:35,513 | INFO     | summary of transferred files:
[2025-07-27 06:05:24] 2025-07-27 10:04:35,513 | INFO     |  -- lfn=log.45758392._000029.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 06:05:24] 2025-07-27 10:04:35,513 | INFO     | stage-out finished correctly
[2025-07-27 06:05:24] 2025-07-27 10:04:37,191 | WARNING  | process 1935726 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 06:05:24] 2025-07-27 10:04:37,191 | INFO     | using path: /tmp/boinchome/slots/14/PanDA_Pilot-6745938976/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 06:05:24] 2025-07-27 10:04:37,513 | INFO     | number of running child processes to parent process 1935726: 1
[2025-07-27 06:05:24] 2025-07-27 10:04:37,514 | INFO     | maximum number of monitored processes: 6
[2025-07-27 06:05:24] 2025-07-27 10:04:38,233 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 06:05:24] 2025-07-27 10:04:38,287 | INFO     | job 6745938976 has state=finished
[2025-07-27 06:05:24] 2025-07-27 10:04:38,287 | INFO     | preparing for final server update for job 6745938976 in state='finished'
[2025-07-27 06:05:24] 2025-07-27 10:04:38,287 | INFO     | this job has now completed (state=finished)
[2025-07-27 06:05:24] 2025-07-27 10:04:38,287 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 06:05:24] 2025-07-27 10:04:38,287 | INFO     | log transfer has been attempted: DONE
[2025-07-27 06:05:24] 2025-07-27 10:04:38,287 | INFO     | job 6745938976 has finished - writing final server update
[2025-07-27 06:05:24] 2025-07-27 10:04:38,288 | INFO     | total number of processed events: 400 (read)
[2025-07-27 06:05:24] 2025-07-27 10:04:38,288 | INFO     | executing command: lscpu
[2025-07-27 06:05:24] 2025-07-27 10:04:38,343 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 06:05:24] 2025-07-27 10:04:40,016 | INFO     | monitor loop #274: job 0:6745938976 is in state 'finished'
[2025-07-27 06:05:24] 2025-07-27 10:04:40,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:05:24] 2025-07-27 10:04:41,673 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 06:05:24] 2025-07-27 10:04:41,678 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3756.567765624999
[2025-07-27 06:05:24] 2025-07-27 10:04:41,690 | INFO     | using path: /tmp/boinchome/slots/14/PanDA_Pilot-6745938976/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 06:05:24] 2025-07-27 10:04:41,691 | INFO     | extracted standard info from prmon json
[2025-07-27 06:05:24] 2025-07-27 10:04:41,691 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 06:05:24] 2025-07-27 10:04:41,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 06:05:24] 2025-07-27 10:04:41,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 06:05:24] 2025-07-27 10:04:41,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 06:05:24] 2025-07-27 10:04:41,692 | INFO     | fitting pss+swap vs Time
[2025-07-27 06:05:24] 2025-07-27 10:04:41,692 | INFO     | sum of square deviations: 48810217.5
[2025-07-27 06:05:24] 2025-07-27 10:04:41,692 | INFO     | sum of deviations: 521649033.5
[2025-07-27 06:05:24] 2025-07-27 10:04:41,692 | INFO     | mean x: 1753608915.5
[2025-07-27 06:05:24] 2025-07-27 10:04:41,692 | INFO     | mean y: 2524691.685185185
[2025-07-27 06:05:24] 2025-07-27 10:04:41,692 | INFO     | -- intersect: -18738805356.83505
[2025-07-27 06:05:24] 2025-07-27 10:04:41,692 | INFO     | intersect: -18738805356.83505
[2025-07-27 06:05:24] 2025-07-27 10:04:41,692 | INFO     | chi2: 0.00018931325613164718
[2025-07-27 06:05:24] 2025-07-27 10:04:41,693 | INFO     | -- intersect: -18738805356.83505
[2025-07-27 06:05:24] 2025-07-27 10:04:41,693 | INFO     | current memory leak: 10.69 B/s (using 54 data points, chi2=0.00)
[2025-07-27 06:05:24] 2025-07-27 10:04:41,693 | INFO     | could have reported an average CPU frequency of 3748 MHz (6 samples)
[2025-07-27 06:05:24] 2025-07-27 10:04:41,693 | INFO     | ..............................
[2025-07-27 06:05:24] 2025-07-27 10:04:41,693 | INFO     | . Timing measurements:
[2025-07-27 06:05:24] 2025-07-27 10:04:41,693 | INFO     | . get job = 0 s
[2025-07-27 06:05:24] 2025-07-27 10:04:41,693 | INFO     | . initial setup = 2 s
[2025-07-27 06:05:24] 2025-07-27 10:04:41,693 | INFO     | . payload setup = 5 s
[2025-07-27 06:05:24] 2025-07-27 10:04:41,693 | INFO     | . stage-in = 0 s
[2025-07-27 06:05:24] 2025-07-27 10:04:41,693 | INFO     | . payload execution = 3680 s
[2025-07-27 06:05:24] 2025-07-27 10:04:41,693 | INFO     | . stage-out = 0 s
[2025-07-27 06:05:24] 2025-07-27 10:04:41,693 | INFO     | . log creation = 0 s
[2025-07-27 06:05:24] 2025-07-27 10:04:41,693 | INFO     | ..............................
[2025-07-27 06:05:24] 2025-07-27 10:04:41,748 | INFO     | 
[2025-07-27 06:05:24] 2025-07-27 10:04:41,748 | INFO     | job summary report
[2025-07-27 06:05:24] 2025-07-27 10:04:41,748 | INFO     | --------------------------------------------------
[2025-07-27 06:05:24] 2025-07-27 10:04:41,748 | INFO     | PanDA job id: 6745938976
[2025-07-27 06:05:24] 2025-07-27 10:04:41,748 | INFO     | task id: 45758392
[2025-07-27 06:05:24] 2025-07-27 10:04:41,748 | INFO     | errors: (none)
[2025-07-27 06:05:24] 2025-07-27 10:04:41,748 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 06:05:24] 2025-07-27 10:04:41,748 | INFO     | pilot state: finished 
[2025-07-27 06:05:24] 2025-07-27 10:04:41,748 | INFO     | transexitcode: 0
[2025-07-27 06:05:24] 2025-07-27 10:04:41,748 | INFO     | exeerrorcode: 0
[2025-07-27 06:05:24] 2025-07-27 10:04:41,748 | INFO     | exeerrordiag: 
[2025-07-27 06:05:24] 2025-07-27 10:04:41,748 | INFO     | exitcode: 0
[2025-07-27 06:05:24] 2025-07-27 10:04:41,748 | INFO     | exitmsg: OK
[2025-07-27 06:05:24] 2025-07-27 10:04:41,748 | INFO     | cpuconsumptiontime: 27442 s
[2025-07-27 06:05:24] 2025-07-27 10:04:41,749 | INFO     | nevents: 400
[2025-07-27 06:05:24] 2025-07-27 10:04:41,749 | INFO     | neventsw: 0
[2025-07-27 06:05:24] 2025-07-27 10:04:41,749 | INFO     | pid: 1935726
[2025-07-27 06:05:24] 2025-07-27 10:04:41,749 | INFO     | pgrp: 1935726
[2025-07-27 06:05:24] 2025-07-27 10:04:41,749 | INFO     | corecount: 8
[2025-07-27 06:05:24] 2025-07-27 10:04:41,749 | INFO     | event service: False
[2025-07-27 06:05:24] 2025-07-27 10:04:41,749 | INFO     | sizes: {0: 2397465, 4: 2397727, 11: 2397755, 3689: 2423597, 3691: 2432597, 3693: 2432653, 3697: 2432975}
[2025-07-27 06:05:24] 2025-07-27 10:04:41,749 | INFO     | --------------------------------------------------
[2025-07-27 06:05:24] 2025-07-27 10:04:41,749 | INFO     | 
[2025-07-27 06:05:24] 2025-07-27 10:04:41,749 | INFO     | executing command: ls -lF /tmp/boinchome/slots/14
[2025-07-27 06:05:24] 2025-07-27 10:04:41,765 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,766 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 06:05:24] 2025-07-27 10:04:41,767 | INFO     | job 6745938976 has completed (purged errors)
[2025-07-27 06:05:24] 2025-07-27 10:04:41,767 | INFO     | overall cleanup function is called
[2025-07-27 06:05:24] 2025-07-27 10:04:42,774 | INFO     | --- collectZombieJob: --- 10, [1935726]
[2025-07-27 06:05:24] 2025-07-27 10:04:42,774 | INFO     | zombie collector waiting for pid 1935726
[2025-07-27 06:05:24] 2025-07-27 10:04:42,774 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 06:05:24] 2025-07-27 10:04:42,774 | INFO     | collected zombie processes
[2025-07-27 06:05:24] 2025-07-27 10:04:42,774 | INFO     | will attempt to kill all subprocesses of pid=1935726
[2025-07-27 06:05:24] 2025-07-27 10:04:43,102 | INFO     | process IDs to be killed: [1935726] (in reverse order)
[2025-07-27 06:05:24] 2025-07-27 10:04:43,212 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 06:05:24] 2025-07-27 10:04:43,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 06:05:24] 2025-07-27 10:04:43,227 | INFO     | did not find any defunct processes belonging to 1935726
[2025-07-27 06:05:24] 2025-07-27 10:04:43,239 | INFO     | did not find any defunct processes belonging to 1935726
[2025-07-27 06:05:24] 2025-07-27 10:04:43,240 | INFO     | ready for new job
[2025-07-27 06:05:24] 2025-07-27 10:04:43,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 06:05:24] 2025-07-27 10:04:43,241 | INFO     | ***************************************
[2025-07-27 06:05:24] 2025-07-27 10:04:43,241 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 06:05:24] 2025-07-27 10:04:43,241 | INFO     | ***************************************
[2025-07-27 06:05:24] 2025-07-27 10:04:43,242 | INFO     | 
[2025-07-27 06:05:24] 2025-07-27 10:04:43,246 | INFO     | architecture information:
[2025-07-27 06:05:24] 2025-07-27 10:04:43,246 | INFO     | executing command: cat /etc/os-release
[2025-07-27 06:05:24] 2025-07-27 10:04:43,260 | INFO     | cat /etc/os-release:
[2025-07-27 06:05:24] NAME="CentOS Linux"
[2025-07-27 06:05:24] VERSION="7 (Core)"
[2025-07-27 06:05:24] ID="centos"
[2025-07-27 06:05:24] ID_LIKE="rhel fedora"
[2025-07-27 06:05:24] VERSION_ID="7"
[2025-07-27 06:05:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 06:05:24] ANSI_COLOR="0;31"
[2025-07-27 06:05:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 06:05:24] HOME_URL="https://www.centos.org/"
[2025-07-27 06:05:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 06:05:24] 
[2025-07-27 06:05:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 06:05:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 06:05:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 06:05:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 06:05:24] 
[2025-07-27 06:05:24] 2025-07-27 10:04:43,261 | INFO     | ***************************************
[2025-07-27 06:05:24] 2025-07-27 10:04:43,764 | INFO     | executing command: df -mP /tmp/boinchome/slots/14
[2025-07-27 06:05:24] 2025-07-27 10:04:43,779 | INFO     | sufficient remaining disk space (164204904448 B)
[2025-07-27 06:05:24] 2025-07-27 10:04:43,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 06:05:24] 2025-07-27 10:04:43,780 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 06:05:24] 2025-07-27 10:04:43,780 | INFO     | update_server=False
[2025-07-27 06:05:24] 2025-07-27 10:04:43,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 06:05:24] 2025-07-27 10:04:43,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 06:05:24] 2025-07-27 10:04:43,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:05:24] 2025-07-27 10:04:43,781 | INFO     | aborting loop
[2025-07-27 06:05:24] 2025-07-27 10:04:44,105 | INFO     | all data control threads have been joined
[2025-07-27 06:05:24] 2025-07-27 10:04:44,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 06:05:24] 2025-07-27 10:04:44,773 | INFO     | all job control threads have been joined
[2025-07-27 06:05:24] 2025-07-27 10:04:44,785 | INFO     | [job] retrieve thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:44,785 | INFO     | [job] job monitor thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:44,937 | INFO     | [payload] failed_post thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:45,110 | INFO     | [data] control thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:45,244 | INFO     | all payload control threads have been joined
[2025-07-27 06:05:24] 2025-07-27 10:04:45,295 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:45,308 | INFO     | [job] validate thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:45,518 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:45,626 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:45,778 | INFO     | [job] control thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:45,785 | INFO     | [data] copytool_out thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:46,055 | INFO     | [payload] validate_post thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:46,129 | INFO     | [data] copytool_in thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:46,249 | INFO     | [payload] control thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:46,759 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:05:24] 2025-07-27 10:04:47,764 | INFO     | [job] queue monitor thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:48,298 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:54,449 | INFO     | job.realtimelogging is not enabled
[2025-07-27 06:05:24] 2025-07-27 10:04:55,454 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 06:05:24] 2025-07-27 10:04:57,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139735632308032)>', '<ExcThread(monitor, started 139734982571776)>']
[2025-07-27 06:05:24] 2025-07-27 10:05:02,196 | INFO     | all workflow threads have been joined
[2025-07-27 06:05:24] 2025-07-27 10:05:02,196 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 06:05:24] 2025-07-27 10:05:02,196 | INFO     | traces error code: 0
[2025-07-27 06:05:24] 2025-07-27 10:05:02,197 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 06:05:24] 2025-07-27 10:05:13,278 | INFO     | PID=1929265 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 06:05:24] 2025-07-27 10:05:13,278 | INFO     | .. there are 16 such processes running
[2025-07-27 06:05:24] 2025-07-27 10:05:13,279 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 06:05:24] 2025-07-27 10:05:13,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 06:05:24] 2025-07-27 10:05:13,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 06:05:24] 2025-07-27 10:05:13,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 06:05:24] 2025-07-27 10:05:13,279 | INFO     | [monitor] control thread has ended
[2025-07-27 06:05:24] 2025-07-27 10:05:13,358 [wrapper] ==== pilot stdout END ====
[2025-07-27 06:05:24] 2025-07-27 10:05:13,361 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 06:05:24] 2025-07-27 10:05:13,364 [wrapper] pilotpid: 1929265
[2025-07-27 06:05:24] 2025-07-27 10:05:13,366 [wrapper] Pilot exit status: 0
[2025-07-27 06:05:24] 2025-07-27 10:05:13,375 [wrapper] pandaids: 6745938976
[2025-07-27 06:05:24] 2025-07-27 10:05:13,453 [wrapper] cleanup supervisor_pilot 2282917 1929266
[2025-07-27 06:05:24] 2025-07-27 10:05:13,456 [wrapper] Test setup, not cleaning
[2025-07-27 06:05:24] 2025-07-27 10:05:13,459 [wrapper] apfmon messages muted
[2025-07-27 06:05:24] 2025-07-27 10:05:13,461 [wrapper] ==== wrapper stdout END ====
[2025-07-27 06:05:24] 2025-07-27 10:05:13,463 [wrapper] ==== wrapper stderr END ====
[2025-07-27 06:05:24]  *** Error codes and diagnostics ***
[2025-07-27 06:05:24]     "exeErrorCode": 0,
[2025-07-27 06:05:24]     "exeErrorDiag": "",
[2025-07-27 06:05:24]     "pilotErrorCode": 0,
[2025-07-27 06:05:24]     "pilotErrorDiag": "",
[2025-07-27 06:05:24]  *** Listing of results directory ***
[2025-07-27 06:05:24] total 407664
[2025-07-27 06:05:24] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 20:36 pilot3.tar.gz
[2025-07-27 06:05:24] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:03 queuedata.json
[2025-07-27 06:05:24] -rwx------. 1 boincer umatlas     36292 Jul 26 21:05 runpilot2-wrapper.sh
[2025-07-27 06:05:24] -rw-r--r--. 1 boincer umatlas       100 Jul 27 05:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 06:05:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 05:02 run_atlas
[2025-07-27 06:05:24] -rw-r--r--. 1 boincer umatlas       105 Jul 27 05:02 job.xml
[2025-07-27 06:05:24] -rw-r--r--. 2 boincer umatlas 237499242 Jul 27 05:02 EVNT.45758390._000002.pool.root.1
[2025-07-27 06:05:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 05:02 start_atlas.sh
[2025-07-27 06:05:24] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 05:02 shared
[2025-07-27 06:05:24] -rw-r--r--. 2 boincer umatlas    542879 Jul 27 05:02 input.tar.gz
[2025-07-27 06:05:24] -rw-r--r--. 1 boincer umatlas         0 Jul 27 05:02 boinc_lockfile
[2025-07-27 06:05:24] -rw-r--r--. 1 boincer umatlas      2557 Jul 27 05:02 pandaJob.out
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas    980109 Jul 27 05:02 agis_schedconf.cvmfs.json
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas   1593052 Jul 27 05:02 agis_ddmendpoints.agis.ALL.json
[2025-07-27 06:05:24] drwx------. 4 boincer umatlas      4096 Jul 27 05:02 pilot3
[2025-07-27 06:05:24] -rw-r--r--. 1 boincer umatlas      7174 Jul 27 06:02 init_data.xml
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas 174737535 Jul 27 06:04 HITS.45758392._000029.pool.root.1
[2025-07-27 06:05:24] -rw-r--r--. 1 boincer umatlas       529 Jul 27 06:04 boinc_task_state.xml
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas      1030 Jul 27 06:04 memory_monitor_summary.json
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas    287602 Jul 27 06:04 log.45758392._000029.job.log.tgz.1
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas      7765 Jul 27 06:04 heartbeat.json
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas        95 Jul 27 06:05 pilot_heartbeat.json
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas       823 Jul 27 06:05 pilotlog.txt
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas    379142 Jul 27 06:05 log.45758392._000029.job.log.1
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas       357 Jul 27 06:05 output.list
[2025-07-27 06:05:24] -rw-r--r--. 1 boincer umatlas       620 Jul 27 06:05 runtime_log
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas    686080 Jul 27 06:05 result.tar.gz
[2025-07-27 06:05:24] -rw-r--r--. 1 boincer umatlas      8674 Jul 27 06:05 runtime_log.err
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas       651 Jul 27 06:05 enAMDmE04z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkkTLDmDwjZMo.diag
[2025-07-27 06:05:24] -rw-r--r--. 1 boincer umatlas        27 Jul 27 06:05 wrapper_checkpoint.txt
[2025-07-27 06:05:24] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 06:05 boinc_mmap_file
[2025-07-27 06:05:24] -rw-r--r--. 1 boincer umatlas     21664 Jul 27 06:05 stderr.txt
[2025-07-27 06:05:24] HITS file was successfully produced:
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas 174737535 Jul 27 06:04 shared/HITS.pool.root.1
[2025-07-27 06:05:24]  *** Contents of shared directory: ***
[2025-07-27 06:05:24] total 403804
[2025-07-27 06:05:24] -rw-r--r--. 2 boincer umatlas 237499242 Jul 27 05:02 ATLAS.root_0
[2025-07-27 06:05:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 05:02 start_atlas.sh
[2025-07-27 06:05:24] -rw-r--r--. 2 boincer umatlas    542879 Jul 27 05:02 input.tar.gz
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas 174737535 Jul 27 06:04 HITS.pool.root.1
[2025-07-27 06:05:24] -rw-------. 1 boincer umatlas    686080 Jul 27 06:05 result.tar.gz
06:05:26 (1925665): run_atlas exited; CPU time 27536.897867
06:05:26 (1925665): called boinc_finish(0)

</stderr_txt>
]]>

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