Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:26:47 (3454834): wrapper (7.7.26015): starting
17:26:47 (3454834): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 17:26:47] Arguments: --nthreads 12
[2025-07-27 17:26:47] Threads: 12
[2025-07-27 17:26:47] Checking for CVMFS
[2025-07-27 17:26:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:26:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:26:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:26:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:26:48] 2.13.1.0 659355 8305 109532 148817 3 56 2440627 4097025 0 130560 0 6976167 99.991 302587 8213 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-27 17:26:48] CVMFS is ok
[2025-07-27 17:26:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:26:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:26:48] Further information can be found at the LHC@home message board.
[2025-07-27 17:26:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:26:48] Checking for apptainer binary...
[2025-07-27 17:26:48] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-27 17:26:48] apptainer is not installed, using version from CVMFS
[2025-07-27 17:26:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:26:48] pckelar8.cern.ch
[2025-07-27 17:26:48] apptainer works
[2025-07-27 17:26:48] Set ATHENA_PROC_NUMBER=12
[2025-07-27 17:26:48] Set ATHENA_CORE_NUMBER=12
[2025-07-27 17:26:48] Starting ATLAS job with PandaID=6745835084
[2025-07-27 17:26:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:44:08]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:44:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 18:44:08]  replicas=None
[2025-07-27 18:44:08]  scope=mc23_13p6TeV
[2025-07-27 18:44:08]  status=None
[2025-07-27 18:44:08]  status_code=0
[2025-07-27 18:44:08]  storage_token=
[2025-07-27 18:44:08]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6745835084/log.45743349._045292.job.log.tgz.1
[2025-07-27 18:44:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/1a/log.45743349._045292.job.log.tgz.1
[2025-07-27 18:44:08]  workdir=None
[2025-07-27 18:44:08] ]
[2025-07-27 18:44:08] 2025-07-27 16:43:30,619 | INFO     | transferring file log.45743349._045292.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6745835084/log.45743349._045292.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 18:44:08] 2025-07-27 16:43:30,620 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6745835084/log.45743349._045292.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._045292.job
[2025-07-27 18:44:08] 2025-07-27 16:43:30,634 | INFO     | adding to output.list: log.45743349._045292.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/1a/log.45743349._045292.job.log.tg
[2025-07-27 18:44:08] 2025-07-27 16:43:30,635 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 18:44:08] 2025-07-27 16:43:30,635 | INFO     | summary of transferred files:
[2025-07-27 18:44:08] 2025-07-27 16:43:30,635 | INFO     |  -- lfn=log.45743349._045292.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 18:44:08] 2025-07-27 16:43:30,635 | INFO     | stage-out finished correctly
[2025-07-27 18:44:08] 2025-07-27 16:43:30,702 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 18:44:08] 2025-07-27 16:43:31,345 | INFO     | job 6745835084 has state=finished
[2025-07-27 18:44:08] 2025-07-27 16:43:31,345 | INFO     | preparing for final server update for job 6745835084 in state='finished'
[2025-07-27 18:44:08] 2025-07-27 16:43:31,345 | INFO     | this job has now completed (state=finished)
[2025-07-27 18:44:08] 2025-07-27 16:43:31,345 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 18:44:08] 2025-07-27 16:43:31,345 | INFO     | log transfer has been attempted: DONE
[2025-07-27 18:44:08] 2025-07-27 16:43:31,346 | INFO     | job 6745835084 has finished - writing final server update
[2025-07-27 18:44:08] 2025-07-27 16:43:31,346 | INFO     | total number of processed events: 400 (read)
[2025-07-27 18:44:08] 2025-07-27 16:43:31,347 | INFO     | executing command: lscpu
[2025-07-27 18:44:08] 2025-07-27 16:43:31,368 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 18:44:08] 2025-07-27 16:43:32,019 | WARNING  | process 3465619 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 18:44:08] 2025-07-27 16:43:32,019 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745835084/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:44:08] 2025-07-27 16:43:32,020 | INFO     | reaping zombies for max 20 seconds
[2025-07-27 18:44:08] 2025-07-27 16:43:32,028 | INFO     | checking for looping job (in state=finished)
[2025-07-27 18:44:08] 2025-07-27 16:43:32,029 | INFO     | using looping job limit: 7200 s
[2025-07-27 18:44:08] 2025-07-27 16:43:32,102 | INFO     | number of running child processes to parent process 3465619: 1
[2025-07-27 18:44:08] 2025-07-27 16:43:32,103 | INFO     | maximum number of monitored processes: 6
[2025-07-27 18:44:08] 2025-07-27 16:43:34,605 | INFO     | monitor loop #350: job 0:6745835084 is in state 'finished'
[2025-07-27 18:44:08] 2025-07-27 16:43:34,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:44:08] 2025-07-27 16:43:35,335 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 18:44:08] 2025-07-27 16:43:35,337 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2206.7114166666665
[2025-07-27 18:44:08] 2025-07-27 16:43:35,338 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745835084/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:44:08] 2025-07-27 16:43:35,339 | INFO     | extracted standard info from prmon json
[2025-07-27 18:44:08] 2025-07-27 16:43:35,339 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:44:08] 2025-07-27 16:43:35,339 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:44:08] 2025-07-27 16:43:35,339 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:44:08] 2025-07-27 16:43:35,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:44:08] 2025-07-27 16:43:35,341 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:44:08] 2025-07-27 16:43:35,341 | INFO     | sum of square deviations: 97479037.0
[2025-07-27 18:44:08] 2025-07-27 16:43:35,341 | INFO     | sum of deviations: -12767424714.499998
[2025-07-27 18:44:08] 2025-07-27 16:43:35,341 | INFO     | mean x: 1753632386.5
[2025-07-27 18:44:08] 2025-07-27 16:43:35,341 | INFO     | mean y: 3027041.338235294
[2025-07-27 18:44:08] 2025-07-27 16:43:35,342 | INFO     | -- intersect: 229686968949.25546
[2025-07-27 18:44:08] 2025-07-27 16:43:35,342 | INFO     | intersect: 229686968949.25546
[2025-07-27 18:44:08] 2025-07-27 16:43:35,342 | INFO     | chi2: 0.10204748840854368
[2025-07-27 18:44:08] 2025-07-27 16:43:35,342 | INFO     | -- intersect: 229686968949.25546
[2025-07-27 18:44:08] 2025-07-27 16:43:35,342 | INFO     | current memory leak: -130.98 B/s (using 68 data points, chi2=0.10)
[2025-07-27 18:44:08] 2025-07-27 16:43:35,342 | INFO     | could have reported an average CPU frequency of 2534 MHz (6 samples)
[2025-07-27 18:44:08] 2025-07-27 16:43:35,342 | INFO     | ..............................
[2025-07-27 18:44:08] 2025-07-27 16:43:35,342 | INFO     | . Timing measurements:
[2025-07-27 18:44:08] 2025-07-27 16:43:35,343 | INFO     | . get job = 0 s
[2025-07-27 18:44:08] 2025-07-27 16:43:35,343 | INFO     | . initial setup = 1 s
[2025-07-27 18:44:08] 2025-07-27 16:43:35,343 | INFO     | . payload setup = 5 s
[2025-07-27 18:44:08] 2025-07-27 16:43:35,343 | INFO     | . stage-in = 0 s
[2025-07-27 18:44:08] 2025-07-27 16:43:35,343 | INFO     | . payload execution = 4570 s
[2025-07-27 18:44:08] 2025-07-27 16:43:35,343 | INFO     | . stage-out = 0 s
[2025-07-27 18:44:08] 2025-07-27 16:43:35,343 | INFO     | . log creation = 0 s
[2025-07-27 18:44:08] 2025-07-27 16:43:35,343 | INFO     | ..............................
[2025-07-27 18:44:08] 2025-07-27 16:43:35,412 | INFO     | 
[2025-07-27 18:44:08] 2025-07-27 16:43:35,412 | INFO     | job summary report
[2025-07-27 18:44:08] 2025-07-27 16:43:35,412 | INFO     | --------------------------------------------------
[2025-07-27 18:44:08] 2025-07-27 16:43:35,412 | INFO     | PanDA job id: 6745835084
[2025-07-27 18:44:08] 2025-07-27 16:43:35,412 | INFO     | task id: 45743349
[2025-07-27 18:44:08] 2025-07-27 16:43:35,412 | INFO     | errors: (none)
[2025-07-27 18:44:08] 2025-07-27 16:43:35,412 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:44:08] 2025-07-27 16:43:35,412 | INFO     | pilot state: finished 
[2025-07-27 18:44:08] 2025-07-27 16:43:35,413 | INFO     | transexitcode: 0
[2025-07-27 18:44:08] 2025-07-27 16:43:35,413 | INFO     | exeerrorcode: 0
[2025-07-27 18:44:08] 2025-07-27 16:43:35,413 | INFO     | exeerrordiag: 
[2025-07-27 18:44:08] 2025-07-27 16:43:35,413 | INFO     | exitcode: 0
[2025-07-27 18:44:08] 2025-07-27 16:43:35,413 | INFO     | exitmsg: OK
[2025-07-27 18:44:08] 2025-07-27 16:43:35,413 | INFO     | cpuconsumptiontime: 49982 s
[2025-07-27 18:44:08] 2025-07-27 16:43:35,413 | INFO     | nevents: 400
[2025-07-27 18:44:08] 2025-07-27 16:43:35,413 | INFO     | neventsw: 0
[2025-07-27 18:44:08] 2025-07-27 16:43:35,413 | INFO     | pid: 3465619
[2025-07-27 18:44:08] 2025-07-27 16:43:35,413 | INFO     | pgrp: 3465619
[2025-07-27 18:44:08] 2025-07-27 16:43:35,413 | INFO     | corecount: 12
[2025-07-27 18:44:08] 2025-07-27 16:43:35,413 | INFO     | event service: False
[2025-07-27 18:44:08] 2025-07-27 16:43:35,414 | INFO     | sizes: {0: 2397468, 3: 2397730, 11: 2397758, 4579: 2423992, 4580: 2423991, 4581: 2433229, 4586: 2433367}
[2025-07-27 18:44:08] 2025-07-27 16:43:35,414 | INFO     | --------------------------------------------------
[2025-07-27 18:44:08] 2025-07-27 16:43:35,414 | INFO     | 
[2025-07-27 18:44:08] 2025-07-27 16:43:35,414 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 18:44:08] 2025-07-27 16:43:35,433 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,433 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,433 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,433 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,433 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,433 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,433 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,434 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,434 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,434 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,434 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,434 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,434 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,434 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,434 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,434 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,434 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,435 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:44:08] 2025-07-27 16:43:35,435 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,435 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:44:08] 2025-07-27 16:43:35,435 | INFO     | job 6745835084 has completed (purged errors)
[2025-07-27 18:44:08] 2025-07-27 16:43:35,435 | INFO     | overall cleanup function is called
[2025-07-27 18:44:08] 2025-07-27 16:43:36,442 | INFO     | --- collectZombieJob: --- 10, [3465619]
[2025-07-27 18:44:08] 2025-07-27 16:43:36,442 | INFO     | zombie collector waiting for pid 3465619
[2025-07-27 18:44:08] 2025-07-27 16:43:36,443 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:44:08] 2025-07-27 16:43:36,443 | INFO     | collected zombie processes
[2025-07-27 18:44:08] 2025-07-27 16:43:36,443 | INFO     | will attempt to kill all subprocesses of pid=3465619
[2025-07-27 18:44:08] 2025-07-27 16:43:36,511 | INFO     | process IDs to be killed: [3465619] (in reverse order)
[2025-07-27 18:44:08] 2025-07-27 16:43:36,545 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:44:08] 2025-07-27 16:43:36,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:44:08] 2025-07-27 16:43:36,548 | INFO     | did not find any defunct processes belonging to 3465619
[2025-07-27 18:44:08] 2025-07-27 16:43:36,550 | INFO     | did not find any defunct processes belonging to 3465619
[2025-07-27 18:44:08] 2025-07-27 16:43:36,550 | INFO     | ready for new job
[2025-07-27 18:44:08] 2025-07-27 16:43:36,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:44:08] 2025-07-27 16:43:36,551 | INFO     | ***************************************
[2025-07-27 18:44:08] 2025-07-27 16:43:36,551 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:44:08] 2025-07-27 16:43:36,551 | INFO     | ***************************************
[2025-07-27 18:44:08] 2025-07-27 16:43:36,552 | INFO     | 
[2025-07-27 18:44:08] 2025-07-27 16:43:36,552 | INFO     | architecture information:
[2025-07-27 18:44:08] 2025-07-27 16:43:36,552 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:44:08] 2025-07-27 16:43:36,564 | INFO     | cat /etc/os-release:
[2025-07-27 18:44:08] NAME="CentOS Linux"
[2025-07-27 18:44:08] VERSION="7 (Core)"
[2025-07-27 18:44:08] ID="centos"
[2025-07-27 18:44:08] ID_LIKE="rhel fedora"
[2025-07-27 18:44:08] VERSION_ID="7"
[2025-07-27 18:44:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:44:08] ANSI_COLOR="0;31"
[2025-07-27 18:44:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:44:08] HOME_URL="https://www.centos.org/"
[2025-07-27 18:44:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:44:08] 
[2025-07-27 18:44:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:44:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:44:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:44:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:44:08] 
[2025-07-27 18:44:08] 2025-07-27 16:43:36,564 | INFO     | ***************************************
[2025-07-27 18:44:08] 2025-07-27 16:43:37,067 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 18:44:08] 2025-07-27 16:43:37,080 | INFO     | sufficient remaining disk space (1717922955264 B)
[2025-07-27 18:44:08] 2025-07-27 16:43:37,080 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:44:08] 2025-07-27 16:43:37,081 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:44:08] 2025-07-27 16:43:37,081 | INFO     | update_server=False
[2025-07-27 18:44:08] 2025-07-27 16:43:37,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:44:08] 2025-07-27 16:43:37,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:44:08] 2025-07-27 16:43:37,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:44:08] 2025-07-27 16:43:37,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:44:08] 2025-07-27 16:43:37,108 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 18:44:08] 2025-07-27 16:43:37,108 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 18:44:08] 2025-07-27 16:43:37,108 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:44:08] 2025-07-27 16:43:37,108 | INFO     | will abort loop
[2025-07-27 18:44:08] 2025-07-27 16:43:37,945 | INFO     | all data control threads have been joined
[2025-07-27 18:44:08] 2025-07-27 16:43:38,033 | INFO     | all payload control threads have been joined
[2025-07-27 18:44:08] 2025-07-27 16:43:38,086 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:38,087 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:38,114 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:38,626 | INFO     | all job control threads have been joined
[2025-07-27 18:44:08] 2025-07-27 16:43:38,778 | INFO     | [job] validate thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:38,867 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:38,948 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:38,951 | INFO     | [data] control thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:39,007 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:39,011 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:39,039 | INFO     | [payload] control thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:39,046 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:39,086 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:39,488 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:39,609 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:39,631 | INFO     | [job] control thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:41,087 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:44:08] 2025-07-27 16:43:41,477 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183914772288)>', '<ExcThread(monitor, started 140183093634816)>']
[2025-07-27 18:44:08] 2025-07-27 16:43:46,498 | INFO     | all workflow threads have been joined
[2025-07-27 18:44:08] 2025-07-27 16:43:46,498 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:44:08] 2025-07-27 16:43:46,498 | INFO     | traces error code: 0
[2025-07-27 18:44:08] 2025-07-27 16:43:46,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:44:08] 2025-07-27 16:44:08,250 | INFO     | PID=3458523 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 18:44:08] 2025-07-27 16:44:08,250 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:44:08] 2025-07-27 16:44:08,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:44:08] 2025-07-27 16:44:08,251 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:44:08] 2025-07-27 16:44:08,251 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:44:08] 2025-07-27 16:44:08,251 | INFO     | [monitor] control thread has ended
[2025-07-27 18:44:08] 2025-07-27 16:44:08,346 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:44:08] 2025-07-27 16:44:08,349 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:44:08] 2025-07-27 16:44:08,351 [wrapper] pilotpid: 3458523
[2025-07-27 18:44:08] 2025-07-27 16:44:08,354 [wrapper] Pilot exit status: 0
[2025-07-27 18:44:08] 2025-07-27 16:44:08,362 [wrapper] pandaids: 6745835084
[2025-07-27 18:44:08] 2025-07-27 16:44:08,380 [wrapper] cleanup supervisor_pilot 3479831 3458524
[2025-07-27 18:44:08] 2025-07-27 16:44:08,382 [wrapper] Test setup, not cleaning
[2025-07-27 18:44:08] 2025-07-27 16:44:08,384 [wrapper] apfmon messages muted
[2025-07-27 18:44:08] 2025-07-27 16:44:08,386 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:44:08] 2025-07-27 16:44:08,388 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:44:08]  *** Error codes and diagnostics ***
[2025-07-27 18:44:08]     "exeErrorCode": 0,
[2025-07-27 18:44:08]     "exeErrorDiag": "",
[2025-07-27 18:44:08]     "pilotErrorCode": 0,
[2025-07-27 18:44:08]     "pilotErrorDiag": "",
[2025-07-27 18:44:08]  *** Listing of results directory ***
[2025-07-27 18:44:08] total 354712
[2025-07-27 18:44:08] -rw-r--r-- 1 boinc boinc    530466 Jul 26 23:42 pilot3.tar.gz
[2025-07-27 18:44:08] -rwx------ 1 boinc boinc     36292 Jul 27 00:14 runpilot2-wrapper.sh
[2025-07-27 18:44:08] -rw-r--r-- 1 boinc boinc      5112 Jul 27 00:14 queuedata.json
[2025-07-27 18:44:08] -rw-r--r-- 1 boinc boinc       100 Jul 27 17:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:44:08] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 17:26 run_atlas
[2025-07-27 18:44:08] -rw-r--r-- 1 boinc boinc       105 Jul 27 17:26 job.xml
[2025-07-27 18:44:08] -rw-r--r-- 1 boinc boinc      6251 Jul 27 17:26 init_data.xml
[2025-07-27 18:44:08] -rw-r--r-- 2 boinc boinc 148365099 Jul 27 17:26 EVNT.45743347._002528.pool.root.1
[2025-07-27 18:44:08] -rw-r--r-- 2 boinc boinc     15095 Jul 27 17:26 start_atlas.sh
[2025-07-27 18:44:08] drwxrwx--x 2 boinc boinc      4096 Jul 27 17:26 shared
[2025-07-27 18:44:08] -rw-r--r-- 2 boinc boinc    542885 Jul 27 17:26 input.tar.gz
[2025-07-27 18:44:08] -rw-r--r-- 1 boinc boinc         0 Jul 27 17:26 boinc_lockfile
[2025-07-27 18:44:08] -rw-r--r-- 1 boinc boinc      2559 Jul 27 17:26 pandaJob.out
[2025-07-27 18:44:08] -rw------- 1 boinc boinc    980101 Jul 27 17:26 agis_schedconf.cvmfs.json
[2025-07-27 18:44:08] -rw------- 1 boinc boinc   1593052 Jul 27 17:26 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:44:08] drwx------ 4 boinc boinc      4096 Jul 27 17:26 pilot3
[2025-07-27 18:44:08] -rw------- 1 boinc boinc 209388356 Jul 27 18:42 HITS.45743349._045292.pool.root.1
[2025-07-27 18:44:08] -rw-r--r-- 1 boinc boinc       530 Jul 27 18:43 boinc_task_state.xml
[2025-07-27 18:44:08] -rw------- 1 boinc boinc      1017 Jul 27 18:43 memory_monitor_summary.json
[2025-07-27 18:44:08] -rw------- 1 boinc boinc        95 Jul 27 18:43 pilot_heartbeat.json
[2025-07-27 18:44:08] -rw------- 1 boinc boinc    347871 Jul 27 18:43 log.45743349._045292.job.log.tgz.1
[2025-07-27 18:44:08] -rw------- 1 boinc boinc      7788 Jul 27 18:43 heartbeat.json
[2025-07-27 18:44:08] -rw-r--r-- 1 boinc boinc      8192 Jul 27 18:44 boinc_mmap_file
[2025-07-27 18:44:08] -rw-r--r-- 1 boinc boinc        27 Jul 27 18:44 wrapper_checkpoint.txt
[2025-07-27 18:44:08] -rw------- 1 boinc boinc       747 Jul 27 18:44 pilotlog.txt
[2025-07-27 18:44:08] -rw------- 1 boinc boinc    448459 Jul 27 18:44 log.45743349._045292.job.log.1
[2025-07-27 18:44:08] -rw------- 1 boinc boinc       357 Jul 27 18:44 output.list
[2025-07-27 18:44:08] -rw-r--r-- 1 boinc boinc       620 Jul 27 18:44 runtime_log
[2025-07-27 18:44:08] -rw------- 1 boinc boinc    819200 Jul 27 18:44 result.tar.gz
[2025-07-27 18:44:08] -rw-r--r-- 1 boinc boinc      8684 Jul 27 18:44 runtime_log.err
[2025-07-27 18:44:08] -rw------- 1 boinc boinc       654 Jul 27 18:44 IvDMDmtK2z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxJTLDmGTBYPo.diag
[2025-07-27 18:44:08] -rw-r--r-- 1 boinc boinc     21954 Jul 27 18:44 stderr.txt
[2025-07-27 18:44:08] HITS file was successfully produced:
[2025-07-27 18:44:08] -rw------- 1 boinc boinc 209388356 Jul 27 18:42 shared/HITS.pool.root.1
[2025-07-27 18:44:08]  *** Contents of shared directory: ***
[2025-07-27 18:44:08] total 350728
[2025-07-27 18:44:08] -rw-r--r-- 2 boinc boinc 148365099 Jul 27 17:26 ATLAS.root_0
[2025-07-27 18:44:08] -rw-r--r-- 2 boinc boinc     15095 Jul 27 17:26 start_atlas.sh
[2025-07-27 18:44:08] -rw-r--r-- 2 boinc boinc    542885 Jul 27 17:26 input.tar.gz
[2025-07-27 18:44:08] -rw------- 1 boinc boinc 209388356 Jul 27 18:42 HITS.pool.root.1
[2025-07-27 18:44:08] -rw------- 1 boinc boinc    819200 Jul 27 18:44 result.tar.gz
18:44:10 (3454834): run_atlas exited; CPU time 50001.019009
18:44:10 (3454834): called boinc_finish(0)

</stderr_txt>
]]>

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