Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:37:23 (3190682): wrapper (7.7.26015): starting
16:37:23 (3190682): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 16:37:23] Arguments: --nthreads 12
[2025-07-27 16:37:23] Threads: 12
[2025-07-27 16:37:23] Checking for CVMFS
[2025-07-27 16:37:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 16:37:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 16:37:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 16:37:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 16:37:23] 2.13.1.0 95439 8803 101216 148815 0 57 2621199 4097025 0 130560 0 7290779 99.990 331400 6324 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-27 16:37:23] CVMFS is ok
[2025-07-27 16:37:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 16:37:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 16:37:23] Further information can be found at the LHC@home message board.
[2025-07-27 16:37:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:37:23] Checking for apptainer binary...
[2025-07-27 16:37:23] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-27 16:37:23] apptainer is not installed, using version from CVMFS
[2025-07-27 16:37:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:37:23] pckelar5.cern.ch
[2025-07-27 16:37:23] apptainer works
[2025-07-27 16:37:23] Set ATHENA_PROC_NUMBER=12
[2025-07-27 16:37:23] Set ATHENA_CORE_NUMBER=12
[2025-07-27 16:37:23] Starting ATLAS job with PandaID=6745982576
[2025-07-27 16:37:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:57:24]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:57:24]  is_altstaged=None
[2025-07-27 17:57:24]  is_tar=False
[2025-07-27 17:57:24]  lfn=log.45758713._000038.job.log.tgz.1
[2025-07-27 17:57:24]  mtime=0
[2025-07-27 17:57:24]  protocol_id=None
[2025-07-27 17:57:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 17:57:24]  replicas=None
[2025-07-27 17:57:24]  scope=mc23_13p6TeV
[2025-07-27 17:57:24]  status=None
[2025-07-27 17:57:24]  status_code=0
[2025-07-27 17:57:24]  storage_token=
[2025-07-27 17:57:24]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6745982576/log.45758713._000038.job.log.tgz.1
[2025-07-27 17:57:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/90/log.45758713._000038.job.log.tgz.1
[2025-07-27 17:57:24]  workdir=None
[2025-07-27 17:57:24] ]
[2025-07-27 17:57:24] 2025-07-27 15:56:45,340 | INFO     | transferring file log.45758713._000038.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6745982576/log.45758713._000038.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 17:57:24] 2025-07-27 15:56:45,340 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6745982576/log.45758713._000038.job.log.tgz.1 /var/lib/boinc/slots/0/log.45758713._000038.job
[2025-07-27 17:57:24] 2025-07-27 15:56:45,356 | INFO     | adding to output.list: log.45758713._000038.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/90/log.45758713._000038.job.log.tg
[2025-07-27 17:57:24] 2025-07-27 15:56:45,356 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 17:57:24] 2025-07-27 15:56:45,356 | INFO     | summary of transferred files:
[2025-07-27 17:57:24] 2025-07-27 15:56:45,356 | INFO     |  -- lfn=log.45758713._000038.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 17:57:24] 2025-07-27 15:56:45,357 | INFO     | stage-out finished correctly
[2025-07-27 17:57:24] 2025-07-27 15:56:46,358 | INFO     | monitor loop #358: job 0:6745982576 is in state 'finished'
[2025-07-27 17:57:24] 2025-07-27 15:56:46,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:57:24] 2025-07-27 15:56:48,623 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 17:57:24] 2025-07-27 15:56:48,684 | INFO     | job 6745982576 has state=finished
[2025-07-27 17:57:24] 2025-07-27 15:56:48,685 | INFO     | preparing for final server update for job 6745982576 in state='finished'
[2025-07-27 17:57:24] 2025-07-27 15:56:48,685 | INFO     | this job has now completed (state=finished)
[2025-07-27 17:57:24] 2025-07-27 15:56:48,685 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 17:57:24] 2025-07-27 15:56:48,685 | INFO     | log transfer has been attempted: DONE
[2025-07-27 17:57:24] 2025-07-27 15:56:48,685 | INFO     | job 6745982576 has finished - writing final server update
[2025-07-27 17:57:24] 2025-07-27 15:56:48,686 | INFO     | total number of processed events: 400 (read)
[2025-07-27 17:57:24] 2025-07-27 15:56:48,687 | INFO     | executing command: lscpu
[2025-07-27 17:57:24] 2025-07-27 15:56:48,705 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 17:57:24] 2025-07-27 15:56:48,862 | INFO     | monitor loop #359: job 0:6745982576 is in state 'finished'
[2025-07-27 17:57:24] 2025-07-27 15:56:48,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:57:24] 2025-07-27 15:56:51,365 | INFO     | monitor loop #360: job 0:6745982576 is in state 'finished'
[2025-07-27 17:57:24] 2025-07-27 15:56:51,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:57:24] 2025-07-27 15:56:52,852 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 17:57:24] 2025-07-27 15:56:52,854 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2446.9175833333334
[2025-07-27 17:57:24] 2025-07-27 15:56:52,856 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745982576/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:57:24] 2025-07-27 15:56:52,857 | INFO     | extracted standard info from prmon json
[2025-07-27 17:57:24] 2025-07-27 15:56:52,857 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 17:57:24] 2025-07-27 15:56:52,857 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 17:57:24] 2025-07-27 15:56:52,857 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 17:57:24] 2025-07-27 15:56:52,857 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 17:57:24] 2025-07-27 15:56:52,859 | INFO     | fitting pss+swap vs Time
[2025-07-27 17:57:24] 2025-07-27 15:56:52,859 | INFO     | sum of square deviations: 110960220.0
[2025-07-27 17:57:24] 2025-07-27 15:56:52,859 | INFO     | sum of deviations: -15021692798.999992
[2025-07-27 17:57:24] 2025-07-27 15:56:52,859 | INFO     | mean x: 1753629513.0
[2025-07-27 17:57:24] 2025-07-27 15:56:52,859 | INFO     | mean y: 2939160.352112676
[2025-07-27 17:57:24] 2025-07-27 15:56:52,860 | INFO     | -- intersect: 237407694013.4514
[2025-07-27 17:57:24] 2025-07-27 15:56:52,860 | INFO     | intersect: 237407694013.4514
[2025-07-27 17:57:24] 2025-07-27 15:56:52,860 | INFO     | chi2: 0.10289745356717231
[2025-07-27 17:57:24] 2025-07-27 15:56:52,860 | INFO     | -- intersect: 237407694013.4514
[2025-07-27 17:57:24] 2025-07-27 15:56:52,860 | INFO     | current memory leak: -135.38 B/s (using 71 data points, chi2=0.10)
[2025-07-27 17:57:24] 2025-07-27 15:56:52,860 | INFO     | could have reported an average CPU frequency of 2467 MHz (6 samples)
[2025-07-27 17:57:24] 2025-07-27 15:56:52,860 | INFO     | ..............................
[2025-07-27 17:57:24] 2025-07-27 15:56:52,861 | INFO     | . Timing measurements:
[2025-07-27 17:57:24] 2025-07-27 15:56:52,861 | INFO     | . get job = 0 s
[2025-07-27 17:57:24] 2025-07-27 15:56:52,861 | INFO     | . initial setup = 1 s
[2025-07-27 17:57:24] 2025-07-27 15:56:52,861 | INFO     | . payload setup = 5 s
[2025-07-27 17:57:24] 2025-07-27 15:56:52,861 | INFO     | . stage-in = 0 s
[2025-07-27 17:57:24] 2025-07-27 15:56:52,861 | INFO     | . payload execution = 4730 s
[2025-07-27 17:57:24] 2025-07-27 15:56:52,861 | INFO     | . stage-out = 0 s
[2025-07-27 17:57:24] 2025-07-27 15:56:52,861 | INFO     | . log creation = 0 s
[2025-07-27 17:57:24] 2025-07-27 15:56:52,861 | INFO     | ..............................
[2025-07-27 17:57:24] 2025-07-27 15:56:52,932 | INFO     | 
[2025-07-27 17:57:24] 2025-07-27 15:56:52,932 | INFO     | job summary report
[2025-07-27 17:57:24] 2025-07-27 15:56:52,932 | INFO     | --------------------------------------------------
[2025-07-27 17:57:24] 2025-07-27 15:56:52,933 | INFO     | PanDA job id: 6745982576
[2025-07-27 17:57:24] 2025-07-27 15:56:52,933 | INFO     | task id: 45758713
[2025-07-27 17:57:24] 2025-07-27 15:56:52,933 | INFO     | errors: (none)
[2025-07-27 17:57:24] 2025-07-27 15:56:52,933 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:57:24] 2025-07-27 15:56:52,933 | INFO     | pilot state: finished 
[2025-07-27 17:57:24] 2025-07-27 15:56:52,933 | INFO     | transexitcode: 0
[2025-07-27 17:57:24] 2025-07-27 15:56:52,933 | INFO     | exeerrorcode: 0
[2025-07-27 17:57:24] 2025-07-27 15:56:52,933 | INFO     | exeerrordiag: 
[2025-07-27 17:57:24] 2025-07-27 15:56:52,933 | INFO     | exitcode: 0
[2025-07-27 17:57:24] 2025-07-27 15:56:52,933 | INFO     | exitmsg: OK
[2025-07-27 17:57:24] 2025-07-27 15:56:52,933 | INFO     | cpuconsumptiontime: 52641 s
[2025-07-27 17:57:24] 2025-07-27 15:56:52,933 | INFO     | nevents: 400
[2025-07-27 17:57:24] 2025-07-27 15:56:52,934 | INFO     | neventsw: 0
[2025-07-27 17:57:24] 2025-07-27 15:56:52,934 | INFO     | pid: 3201472
[2025-07-27 17:57:24] 2025-07-27 15:56:52,934 | INFO     | pgrp: 3201472
[2025-07-27 17:57:24] 2025-07-27 15:56:52,934 | INFO     | corecount: 12
[2025-07-27 17:57:24] 2025-07-27 15:56:52,934 | INFO     | event service: False
[2025-07-27 17:57:24] 2025-07-27 15:56:52,934 | INFO     | sizes: {0: 2397297, 1: 2397496, 4: 2397758, 11: 2397786, 4739: 2424075, 4741: 2433073, 4744: 2433257, 4749: 2433451}
[2025-07-27 17:57:24] 2025-07-27 15:56:52,934 | INFO     | --------------------------------------------------
[2025-07-27 17:57:24] 2025-07-27 15:56:52,934 | INFO     | 
[2025-07-27 17:57:24] 2025-07-27 15:56:52,934 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 17:57:24] 2025-07-27 15:56:52,953 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,955 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,955 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:57:24] 2025-07-27 15:56:52,955 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,955 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:57:24] 2025-07-27 15:56:52,955 | INFO     | job 6745982576 has completed (purged errors)
[2025-07-27 17:57:24] 2025-07-27 15:56:52,955 | INFO     | overall cleanup function is called
[2025-07-27 17:57:24] 2025-07-27 15:56:53,962 | INFO     | --- collectZombieJob: --- 10, [3201472]
[2025-07-27 17:57:24] 2025-07-27 15:56:53,962 | INFO     | zombie collector waiting for pid 3201472
[2025-07-27 17:57:24] 2025-07-27 15:56:53,962 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:57:24] 2025-07-27 15:56:53,962 | INFO     | collected zombie processes
[2025-07-27 17:57:24] 2025-07-27 15:56:53,962 | INFO     | will attempt to kill all subprocesses of pid=3201472
[2025-07-27 17:57:24] 2025-07-27 15:56:54,036 | INFO     | process IDs to be killed: [3201472] (in reverse order)
[2025-07-27 17:57:24] 2025-07-27 15:56:54,071 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:57:24] 2025-07-27 15:56:54,071 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:57:24] 2025-07-27 15:56:54,073 | INFO     | did not find any defunct processes belonging to 3201472
[2025-07-27 17:57:24] 2025-07-27 15:56:54,075 | INFO     | did not find any defunct processes belonging to 3201472
[2025-07-27 17:57:24] 2025-07-27 15:56:54,075 | INFO     | ready for new job
[2025-07-27 17:57:24] 2025-07-27 15:56:54,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:57:24] 2025-07-27 15:56:54,076 | INFO     | ***************************************
[2025-07-27 17:57:24] 2025-07-27 15:56:54,077 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:57:24] 2025-07-27 15:56:54,077 | INFO     | ***************************************
[2025-07-27 17:57:24] 2025-07-27 15:56:54,077 | INFO     | 
[2025-07-27 17:57:24] 2025-07-27 15:56:54,077 | INFO     | architecture information:
[2025-07-27 17:57:24] 2025-07-27 15:56:54,077 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:57:24] 2025-07-27 15:56:54,089 | INFO     | cat /etc/os-release:
[2025-07-27 17:57:24] NAME="CentOS Linux"
[2025-07-27 17:57:24] VERSION="7 (Core)"
[2025-07-27 17:57:24] ID="centos"
[2025-07-27 17:57:24] ID_LIKE="rhel fedora"
[2025-07-27 17:57:24] VERSION_ID="7"
[2025-07-27 17:57:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:57:24] ANSI_COLOR="0;31"
[2025-07-27 17:57:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:57:24] HOME_URL="https://www.centos.org/"
[2025-07-27 17:57:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:57:24] 
[2025-07-27 17:57:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:57:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:57:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:57:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:57:24] 
[2025-07-27 17:57:24] 2025-07-27 15:56:54,089 | INFO     | ***************************************
[2025-07-27 17:57:24] 2025-07-27 15:56:54,592 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 17:57:24] 2025-07-27 15:56:54,605 | INFO     | sufficient remaining disk space (1817245122560 B)
[2025-07-27 17:57:24] 2025-07-27 15:56:54,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:57:24] 2025-07-27 15:56:54,606 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:57:24] 2025-07-27 15:56:54,606 | INFO     | update_server=False
[2025-07-27 17:57:24] 2025-07-27 15:56:54,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:57:24] 2025-07-27 15:56:54,606 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:57:24] 2025-07-27 15:56:54,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:57:24] 2025-07-27 15:56:54,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:57:24] 2025-07-27 15:56:54,873 | INFO     | aborting loop
[2025-07-27 17:57:24] 2025-07-27 15:56:54,967 | INFO     | all data control threads have been joined
[2025-07-27 17:57:24] 2025-07-27 15:56:55,611 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:55,612 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:55,617 | INFO     | all payload control threads have been joined
[2025-07-27 17:57:24] 2025-07-27 15:56:55,879 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:55,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:57:24] 2025-07-27 15:56:55,973 | INFO     | [data] control thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:56,015 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:56,201 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:56,228 | INFO     | all job control threads have been joined
[2025-07-27 17:57:24] 2025-07-27 15:56:56,306 | INFO     | [job] validate thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:56,398 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:56,481 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:56,482 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:56,615 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:56,623 | INFO     | [payload] control thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:56,737 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:57,233 | INFO     | [job] control thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:57,943 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:58,696 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:57:24] 2025-07-27 15:56:59,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139789570803520)>', '<ExcThread(monitor, started 139788753557248)>']
[2025-07-27 17:57:24] 2025-07-27 15:57:04,991 | INFO     | all workflow threads have been joined
[2025-07-27 17:57:24] 2025-07-27 15:57:04,991 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:57:24] 2025-07-27 15:57:04,991 | INFO     | traces error code: 0
[2025-07-27 17:57:24] 2025-07-27 15:57:04,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:57:24] 2025-07-27 15:57:24,662 | INFO     | PID=3194359 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 17:57:24] 2025-07-27 15:57:24,662 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:57:24] 2025-07-27 15:57:24,663 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:57:24] 2025-07-27 15:57:24,663 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:57:24] 2025-07-27 15:57:24,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:57:24] 2025-07-27 15:57:24,663 | INFO     | [monitor] control thread has ended
[2025-07-27 17:57:24] 2025-07-27 15:57:24,735 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:57:24] 2025-07-27 15:57:24,737 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:57:24] 2025-07-27 15:57:24,740 [wrapper] pilotpid: 3194359
[2025-07-27 17:57:24] 2025-07-27 15:57:24,742 [wrapper] Pilot exit status: 0
[2025-07-27 17:57:24] 2025-07-27 15:57:24,751 [wrapper] pandaids: 6745982576
[2025-07-27 17:57:24] 2025-07-27 15:57:24,770 [wrapper] cleanup supervisor_pilot 3217334 3194360
[2025-07-27 17:57:24] 2025-07-27 15:57:24,772 [wrapper] Test setup, not cleaning
[2025-07-27 17:57:24] 2025-07-27 15:57:24,774 [wrapper] apfmon messages muted
[2025-07-27 17:57:24] 2025-07-27 15:57:24,776 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:57:24] 2025-07-27 15:57:24,777 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:57:24]  *** Error codes and diagnostics ***
[2025-07-27 17:57:24]     "exeErrorCode": 0,
[2025-07-27 17:57:24]     "exeErrorDiag": "",
[2025-07-27 17:57:24]     "pilotErrorCode": 0,
[2025-07-27 17:57:24]     "pilotErrorDiag": "",
[2025-07-27 17:57:24]  *** Listing of results directory ***
[2025-07-27 17:57:24] total 420264
[2025-07-27 17:57:24] -rw-r--r-- 1 boinc boinc    530466 Jul 27 05:36 pilot3.tar.gz
[2025-07-27 17:57:24] -rw-r--r-- 1 boinc boinc      5112 Jul 27 05:48 queuedata.json
[2025-07-27 17:57:24] -rwx------ 1 boinc boinc     36292 Jul 27 05:49 runpilot2-wrapper.sh
[2025-07-27 17:57:24] -rw-r--r-- 1 boinc boinc       100 Jul 27 16:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:57:24] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 16:37 run_atlas
[2025-07-27 17:57:24] -rw-r--r-- 1 boinc boinc       105 Jul 27 16:37 job.xml
[2025-07-27 17:57:24] -rw-r--r-- 1 boinc boinc      6294 Jul 27 16:37 init_data.xml
[2025-07-27 17:57:24] -rw-r--r-- 2 boinc boinc 248596058 Jul 27 16:37 EVNT.45758711._000002.pool.root.1
[2025-07-27 17:57:24] -rw-r--r-- 2 boinc boinc     15095 Jul 27 16:37 start_atlas.sh
[2025-07-27 17:57:24] drwxrwx--x 2 boinc boinc        68 Jul 27 16:37 shared
[2025-07-27 17:57:24] -rw-r--r-- 2 boinc boinc    542879 Jul 27 16:37 input.tar.gz
[2025-07-27 17:57:24] -rw-r--r-- 1 boinc boinc         0 Jul 27 16:37 boinc_lockfile
[2025-07-27 17:57:24] -rw-r--r-- 1 boinc boinc      2561 Jul 27 16:37 pandaJob.out
[2025-07-27 17:57:24] -rw------- 1 boinc boinc    980109 Jul 27 16:37 agis_schedconf.cvmfs.json
[2025-07-27 17:57:24] -rw------- 1 boinc boinc   1593052 Jul 27 16:37 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:57:24] drwx------ 4 boinc boinc      4096 Jul 27 16:37 pilot3
[2025-07-27 17:57:24] -rw------- 1 boinc boinc 176254286 Jul 27 17:56 HITS.45758713._000038.pool.root.1
[2025-07-27 17:57:24] -rw------- 1 boinc boinc        95 Jul 27 17:56 pilot_heartbeat.json
[2025-07-27 17:57:24] -rw-r--r-- 1 boinc boinc       529 Jul 27 17:56 boinc_task_state.xml
[2025-07-27 17:57:24] -rw------- 1 boinc boinc      1017 Jul 27 17:56 memory_monitor_summary.json
[2025-07-27 17:57:24] -rw------- 1 boinc boinc    363473 Jul 27 17:56 log.45758713._000038.job.log.tgz.1
[2025-07-27 17:57:24] -rw------- 1 boinc boinc      7779 Jul 27 17:56 heartbeat.json
[2025-07-27 17:57:24] -rw-r--r-- 1 boinc boinc        27 Jul 27 17:57 wrapper_checkpoint.txt
[2025-07-27 17:57:24] -rw-r--r-- 1 boinc boinc      8192 Jul 27 17:57 boinc_mmap_file
[2025-07-27 17:57:24] -rw------- 1 boinc boinc       747 Jul 27 17:57 pilotlog.txt
[2025-07-27 17:57:24] -rw------- 1 boinc boinc    458644 Jul 27 17:57 log.45758713._000038.job.log.1
[2025-07-27 17:57:24] -rw------- 1 boinc boinc       357 Jul 27 17:57 output.list
[2025-07-27 17:57:24] -rw-r--r-- 1 boinc boinc       620 Jul 27 17:57 runtime_log
[2025-07-27 17:57:24] -rw------- 1 boinc boinc    839680 Jul 27 17:57 result.tar.gz
[2025-07-27 17:57:24] -rw------- 1 boinc boinc       654 Jul 27 17:57 WCUKDmkZ7z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm68TLDmdivHQo.diag
[2025-07-27 17:57:24] -rw-r--r-- 1 boinc boinc      8684 Jul 27 17:57 runtime_log.err
[2025-07-27 17:57:24] -rw-r--r-- 1 boinc boinc     21648 Jul 27 17:57 stderr.txt
[2025-07-27 17:57:24] HITS file was successfully produced:
[2025-07-27 17:57:24] -rw------- 1 boinc boinc 176254286 Jul 27 17:56 shared/HITS.pool.root.1
[2025-07-27 17:57:24]  *** Contents of shared directory: ***
[2025-07-27 17:57:24] total 416264
[2025-07-27 17:57:24] -rw-r--r-- 2 boinc boinc 248596058 Jul 27 16:37 ATLAS.root_0
[2025-07-27 17:57:24] -rw-r--r-- 2 boinc boinc     15095 Jul 27 16:37 start_atlas.sh
[2025-07-27 17:57:24] -rw-r--r-- 2 boinc boinc    542879 Jul 27 16:37 input.tar.gz
[2025-07-27 17:57:24] -rw------- 1 boinc boinc 176254286 Jul 27 17:56 HITS.pool.root.1
[2025-07-27 17:57:24] -rw------- 1 boinc boinc    839680 Jul 27 17:57 result.tar.gz
17:57:26 (3190682): run_atlas exited; CPU time 52672.434144
17:57:26 (3190682): called boinc_finish(0)

</stderr_txt>
]]>

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