Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:49:28 (1086): wrapper (7.7.26015): starting
04:49:28 (1086): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 04:49:28] Arguments: --nthreads 8
[2025-07-27 04:49:28] Threads: 8
[2025-07-27 04:49:28] Checking for CVMFS
[2025-07-27 04:49:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 04:49:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 04:49:29] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 04:49:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 04:49:29] 2.11.2.0 2936 84634 77564 148805 1 58 11286142 20275200 1 130560 0 19222777 99.948 4959049 37283 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 04:49:29] CVMFS is ok
[2025-07-27 04:49:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 04:49:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 04:49:29] Further information can be found at the LHC@home message board.
[2025-07-27 04:49:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 04:49:29] Checking for apptainer binary...
[2025-07-27 04:49:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 04:49:29] Running /usr/bin/apptainer --version
[2025-07-27 04:49:29] apptainer version 1.3.2-1.el7
[2025-07-27 04:49:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 04:49:31] c-204-13.aglt2.org
[2025-07-27 04:49:31] apptainer works
[2025-07-27 04:49:31] Set ATHENA_PROC_NUMBER=8
[2025-07-27 04:49:31] Set ATHENA_CORE_NUMBER=8
[2025-07-27 04:49:31] Starting ATLAS job with PandaID=6745925219
[2025-07-27 04:49:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:11:49 (11767): wrapper (7.7.26015): starting
07:11:49 (11767): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 07:11:49] Arguments: --nthreads 8
[2025-07-27 07:11:49] Threads: 8
[2025-07-27 07:11:49] This job has been restarted, cleaning up previous attempt
[2025-07-27 07:11:49] Checking for CVMFS
[2025-07-27 07:11:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 07:11:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 07:11:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 07:11:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 07:11:50] 2.11.2.0 2936 84777 77276 148810 1 1 11332024 20275201 1 130560 0 19307850 99.948 4966982 37245 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 07:11:50] CVMFS is ok
[2025-07-27 07:11:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 07:11:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 07:11:50] Further information can be found at the LHC@home message board.
[2025-07-27 07:11:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 07:11:50] Checking for apptainer binary...
[2025-07-27 07:11:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 07:11:50] Running /usr/bin/apptainer --version
[2025-07-27 07:11:50] apptainer version 1.3.2-1.el7
[2025-07-27 07:11:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 07:11:51] c-204-13.aglt2.org
[2025-07-27 07:11:51] apptainer works
[2025-07-27 07:11:51] Set ATHENA_PROC_NUMBER=8
[2025-07-27 07:11:51] Set ATHENA_CORE_NUMBER=8
[2025-07-27 07:11:52] Starting ATLAS job with PandaID=6745925219
[2025-07-27 07:11:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 09:45:19]  *** The last 200 lines of the pilot log: ***
[2025-07-27 09:45:19] 2025-07-27 13:44:46,260 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 09:45:19] 2025-07-27 13:44:46,261 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 09:45:19] 2025-07-27 13:44:46,261 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 09:45:19] 2025-07-27 13:44:46,265 | INFO     | fitting pss+swap vs Time
[2025-07-27 09:45:19] 2025-07-27 13:44:46,265 | INFO     | sum of square deviations: 1046484737.5
[2025-07-27 09:45:19] 2025-07-27 13:44:46,266 | INFO     | sum of deviations: 14448224814.5
[2025-07-27 09:45:19] 2025-07-27 13:44:46,266 | INFO     | mean x: 1753619305.5
[2025-07-27 09:45:19] 2025-07-27 13:44:46,266 | INFO     | mean y: 2480927.9
[2025-07-27 09:45:19] 2025-07-27 13:44:46,267 | INFO     | -- intersect: -24208752219.598583
[2025-07-27 09:45:19] 2025-07-27 13:44:46,267 | INFO     | intersect: -24208752219.598583
[2025-07-27 09:45:19] 2025-07-27 13:44:46,267 | INFO     | chi2: 2.2558558999343186
[2025-07-27 09:45:19] 2025-07-27 13:44:46,267 | INFO     | sum of square deviations: 945282840.0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,268 | INFO     | sum of deviations: 23803718533.999996
[2025-07-27 09:45:19] 2025-07-27 13:44:46,268 | INFO     | mean x: 1753619153.0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,268 | INFO     | mean y: 2494619.227586207
[2025-07-27 09:45:19] 2025-07-27 13:44:46,269 | INFO     | -- intersect: -44156412077.78119
[2025-07-27 09:45:19] 2025-07-27 13:44:46,269 | INFO     | intersect: -44156412077.78119
[2025-07-27 09:45:19] 2025-07-27 13:44:46,269 | INFO     | chi2: 1.4831819484928856
[2025-07-27 09:45:19] 2025-07-27 13:44:46,269 | INFO     | current chi2=1.4831819484928856 (change=34.25191970213745 %)
[2025-07-27 09:45:19] 2025-07-27 13:44:46,269 | INFO     | sum of square deviations: 850825255.0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,270 | INFO     | sum of deviations: 22990354111.000004
[2025-07-27 09:45:19] 2025-07-27 13:44:46,270 | INFO     | mean x: 1753619000.5
[2025-07-27 09:45:19] 2025-07-27 13:44:46,270 | INFO     | mean y: 2493305.557142857
[2025-07-27 09:45:19] 2025-07-27 13:44:46,270 | INFO     | -- intersect: -47382468013.28957
[2025-07-27 09:45:19] 2025-07-27 13:44:46,271 | INFO     | intersect: -47382468013.28957
[2025-07-27 09:45:19] 2025-07-27 13:44:46,271 | INFO     | chi2: 1.4840407943231013
[2025-07-27 09:45:19] 2025-07-27 13:44:46,271 | INFO     | current chi2=1.4840407943231013 (change=-0.05790562857701815 %)
[2025-07-27 09:45:19] 2025-07-27 13:44:46,271 | INFO     | right removable region: 139
[2025-07-27 09:45:19] 2025-07-27 13:44:46,271 | INFO     | sum of square deviations: 945282840.0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,272 | INFO     | sum of deviations: -7528956476.0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,272 | INFO     | mean x: 1753619458.0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,272 | INFO     | mean y: 2513513.4413793106
[2025-07-27 09:45:19] 2025-07-27 13:44:46,272 | INFO     | -- intersect: 13969681874.12876
[2025-07-27 09:45:19] 2025-07-27 13:44:46,273 | INFO     | intersect: 13969681874.12876
[2025-07-27 09:45:19] 2025-07-27 13:44:46,273 | INFO     | chi2: 0.8569765406899534
[2025-07-27 09:45:19] 2025-07-27 13:44:46,273 | INFO     | current chi2=0.8569765406899534 (change=62.0110246973264 %)
[2025-07-27 09:45:19] 2025-07-27 13:44:46,273 | INFO     | sum of square deviations: 850825255.0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,274 | INFO     | sum of deviations: -11622329359.5
[2025-07-27 09:45:19] 2025-07-27 13:44:46,274 | INFO     | mean x: 1753619610.5
[2025-07-27 09:45:19] 2025-07-27 13:44:46,274 | INFO     | mean y: 2520016.7357142856
[2025-07-27 09:45:19] 2025-07-27 13:44:46,274 | INFO     | -- intersect: 23957080092.069992
[2025-07-27 09:45:19] 2025-07-27 13:44:46,274 | INFO     | intersect: 23957080092.069992
[2025-07-27 09:45:19] 2025-07-27 13:44:46,275 | INFO     | chi2: 0.8019008567219456
[2025-07-27 09:45:19] 2025-07-27 13:44:46,275 | INFO     | current chi2=0.8019008567219456 (change=6.426743481643774 %)
[2025-07-27 09:45:19] 2025-07-27 13:44:46,275 | INFO     | left removable region: 20
[2025-07-27 09:45:19] 2025-07-27 13:44:46,275 | INFO     | sum of square deviations: 522502820.0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,276 | INFO     | sum of deviations: -2210937680.0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,276 | INFO     | mean x: 1753619580.0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,276 | INFO     | mean y: 2536970.2016806724
[2025-07-27 09:45:19] 2025-07-27 13:44:46,276 | INFO     | -- intersect: 7422867459.150572
[2025-07-27 09:45:19] 2025-07-27 13:44:46,276 | INFO     | intersect: 7422867459.150572
[2025-07-27 09:45:19] 2025-07-27 13:44:46,277 | INFO     | chi2: 0.003177117583151782
[2025-07-27 09:45:19] 2025-07-27 13:44:46,277 | INFO     | -- intersect: 7422867459.150572
[2025-07-27 09:45:19] 2025-07-27 13:44:46,277 | INFO     | current memory leak: -4.23 B/s (using 119 data points, chi2=0.00)
[2025-07-27 09:45:19] 2025-07-27 13:44:46,277 | INFO     | could have reported an average CPU frequency of 1995 MHz (8 samples)
[2025-07-27 09:45:19] 2025-07-27 13:44:46,277 | INFO     | ..............................
[2025-07-27 09:45:19] 2025-07-27 13:44:46,278 | INFO     | . Timing measurements:
[2025-07-27 09:45:19] 2025-07-27 13:44:46,278 | INFO     | . get job = 0 s
[2025-07-27 09:45:19] 2025-07-27 13:44:46,278 | INFO     | . initial setup = 1 s
[2025-07-27 09:45:19] 2025-07-27 13:44:46,278 | INFO     | . payload setup = 12 s
[2025-07-27 09:45:19] 2025-07-27 13:44:46,278 | INFO     | . stage-in = 0 s
[2025-07-27 09:45:19] 2025-07-27 13:44:46,278 | INFO     | . payload execution = 9109 s
[2025-07-27 09:45:19] 2025-07-27 13:44:46,278 | INFO     | . stage-out = 2 s
[2025-07-27 09:45:19] 2025-07-27 13:44:46,278 | INFO     | . log creation = 0 s
[2025-07-27 09:45:19] 2025-07-27 13:44:46,279 | INFO     | ..............................
[2025-07-27 09:45:19] 2025-07-27 13:44:46,615 | INFO     | 
[2025-07-27 09:45:19] 2025-07-27 13:44:46,615 | INFO     | job summary report
[2025-07-27 09:45:19] 2025-07-27 13:44:46,615 | INFO     | --------------------------------------------------
[2025-07-27 09:45:19] 2025-07-27 13:44:46,616 | INFO     | PanDA job id: 6745925219
[2025-07-27 09:45:19] 2025-07-27 13:44:46,616 | INFO     | task id: 45758730
[2025-07-27 09:45:19] 2025-07-27 13:44:46,616 | INFO     | errors: (none)
[2025-07-27 09:45:19] 2025-07-27 13:44:46,616 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 09:45:19] 2025-07-27 13:44:46,616 | INFO     | pilot state: finished 
[2025-07-27 09:45:19] 2025-07-27 13:44:46,617 | INFO     | transexitcode: 0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,617 | INFO     | exeerrorcode: 0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,617 | INFO     | exeerrordiag: 
[2025-07-27 09:45:19] 2025-07-27 13:44:46,617 | INFO     | exitcode: 0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,617 | INFO     | exitmsg: OK
[2025-07-27 09:45:19] 2025-07-27 13:44:46,617 | INFO     | cpuconsumptiontime: 68141 s
[2025-07-27 09:45:19] 2025-07-27 13:44:46,618 | INFO     | nevents: 400
[2025-07-27 09:45:19] 2025-07-27 13:44:46,618 | INFO     | neventsw: 0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,618 | INFO     | pid: 21993
[2025-07-27 09:45:19] 2025-07-27 13:44:46,618 | INFO     | pgrp: 21993
[2025-07-27 09:45:19] 2025-07-27 13:44:46,618 | INFO     | corecount: 8
[2025-07-27 09:45:19] 2025-07-27 13:44:46,618 | INFO     | event service: False
[2025-07-27 09:45:19] 2025-07-27 13:44:46,619 | INFO     | sizes: {0: 2397467, 1: 2397495, 6: 2397757, 11: 2397785, 9125: 2426042, 9129: 2435040, 9132: 2435224, 9142: 2435418}
[2025-07-27 09:45:19] 2025-07-27 13:44:46,619 | INFO     | --------------------------------------------------
[2025-07-27 09:45:19] 2025-07-27 13:44:46,619 | INFO     | 
[2025-07-27 09:45:19] 2025-07-27 13:44:46,619 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 09:45:19] 2025-07-27 13:44:46,648 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,648 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,649 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,649 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,652 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,652 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 09:45:19] 2025-07-27 13:44:46,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,652 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 09:45:19] 2025-07-27 13:44:46,653 | INFO     | job 6745925219 has completed (purged errors)
[2025-07-27 09:45:19] 2025-07-27 13:44:46,653 | INFO     | overall cleanup function is called
[2025-07-27 09:45:19] 2025-07-27 13:44:47,661 | INFO     | --- collectZombieJob: --- 10, [21993]
[2025-07-27 09:45:19] 2025-07-27 13:44:47,662 | INFO     | zombie collector waiting for pid 21993
[2025-07-27 09:45:19] 2025-07-27 13:44:47,662 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 09:45:19] 2025-07-27 13:44:47,662 | INFO     | collected zombie processes
[2025-07-27 09:45:19] 2025-07-27 13:44:47,662 | INFO     | will attempt to kill all subprocesses of pid=21993
[2025-07-27 09:45:19] 2025-07-27 13:44:47,759 | INFO     | process IDs to be killed: [21993] (in reverse order)
[2025-07-27 09:45:19] 2025-07-27 13:44:47,816 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 09:45:19] 2025-07-27 13:44:47,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 09:45:19] 2025-07-27 13:44:47,822 | INFO     | did not find any defunct processes belonging to 21993
[2025-07-27 09:45:19] 2025-07-27 13:44:47,825 | INFO     | did not find any defunct processes belonging to 21993
[2025-07-27 09:45:19] 2025-07-27 13:44:47,825 | INFO     | ready for new job
[2025-07-27 09:45:19] 2025-07-27 13:44:47,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 09:45:19] 2025-07-27 13:44:47,828 | INFO     | ***************************************
[2025-07-27 09:45:19] 2025-07-27 13:44:47,828 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 09:45:19] 2025-07-27 13:44:47,828 | INFO     | ***************************************
[2025-07-27 09:45:19] 2025-07-27 13:44:47,828 | INFO     | 
[2025-07-27 09:45:19] 2025-07-27 13:44:47,829 | INFO     | architecture information:
[2025-07-27 09:45:19] 2025-07-27 13:44:47,829 | INFO     | executing command: cat /etc/os-release
[2025-07-27 09:45:19] 2025-07-27 13:44:47,846 | INFO     | cat /etc/os-release:
[2025-07-27 09:45:19] NAME="CentOS Linux"
[2025-07-27 09:45:19] VERSION="7 (Core)"
[2025-07-27 09:45:19] ID="centos"
[2025-07-27 09:45:19] ID_LIKE="rhel fedora"
[2025-07-27 09:45:19] VERSION_ID="7"
[2025-07-27 09:45:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 09:45:19] ANSI_COLOR="0;31"
[2025-07-27 09:45:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 09:45:19] HOME_URL="https://www.centos.org/"
[2025-07-27 09:45:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 09:45:19] 
[2025-07-27 09:45:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 09:45:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 09:45:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 09:45:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 09:45:19] 
[2025-07-27 09:45:19] 2025-07-27 13:44:47,847 | INFO     | ***************************************
[2025-07-27 09:45:19] 2025-07-27 13:44:48,350 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 09:45:19] 2025-07-27 13:44:48,369 | INFO     | sufficient remaining disk space (18577620992 B)
[2025-07-27 09:45:19] 2025-07-27 13:44:48,370 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 09:45:19] 2025-07-27 13:44:48,370 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 09:45:19] 2025-07-27 13:44:48,370 | INFO     | update_server=False
[2025-07-27 09:45:19] 2025-07-27 13:44:48,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 09:45:19] 2025-07-27 13:44:48,371 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:45:19] 2025-07-27 13:44:48,438 | INFO     | all data control threads have been joined
[2025-07-27 09:45:19] 2025-07-27 13:44:48,611 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 09:45:19] 2025-07-27 13:44:48,655 | INFO     | all payload control threads have been joined
[2025-07-27 09:45:19] 2025-07-27 13:44:48,811 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 09:45:19] 2025-07-27 13:44:48,811 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 09:45:19] 2025-07-27 13:44:48,817 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:45:19] 2025-07-27 13:44:48,818 | INFO     | will abort loop
[2025-07-27 09:45:19] 2025-07-27 13:44:49,158 | INFO     | all job control threads have been joined
[2025-07-27 09:45:19] 2025-07-27 13:44:49,376 | INFO     | [job] retrieve thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:49,377 | INFO     | [job] queue monitor thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:49,418 | INFO     | [job] validate thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:49,434 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:49,434 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:49,443 | INFO     | [data] control thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:49,455 | INFO     | [data] copytool_in thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:49,601 | INFO     | [payload] validate_post thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:49,660 | INFO     | [payload] control thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:49,694 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:49,823 | INFO     | [job] job monitor thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:49,921 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:50,162 | INFO     | [job] control thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:50,612 | INFO     | [data] copytool_out thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:50,739 | INFO     | [payload] failed_post thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:51,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 09:45:19] 2025-07-27 13:44:55,175 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 09:45:19] 2025-07-27 13:44:57,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140296231737152)>', '<ExcThread(monitor, started 140295391909632)>']
[2025-07-27 09:45:19] 2025-07-27 13:45:02,225 | INFO     | all workflow threads have been joined
[2025-07-27 09:45:19] 2025-07-27 13:45:02,226 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 09:45:19] 2025-07-27 13:45:02,226 | INFO     | traces error code: 0
[2025-07-27 09:45:19] 2025-07-27 13:45:02,227 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 09:45:19] 2025-07-27 13:45:18,808 | INFO     | PID=15511 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 09:45:19] 2025-07-27 13:45:18,809 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 09:45:19] 2025-07-27 13:45:18,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 09:45:19] 2025-07-27 13:45:18,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 09:45:19] 2025-07-27 13:45:18,809 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 09:45:19] 2025-07-27 13:45:18,810 | INFO     | [monitor] control thread has ended
[2025-07-27 09:45:19] 2025-07-27 13:45:18,943 [wrapper] ==== pilot stdout END ====
[2025-07-27 09:45:19] 2025-07-27 13:45:18,948 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 09:45:19] 2025-07-27 13:45:18,953 [wrapper] pilotpid: 15511
[2025-07-27 09:45:19] 2025-07-27 13:45:18,957 [wrapper] Pilot exit status: 0
[2025-07-27 09:45:19] 2025-07-27 13:45:18,976 [wrapper] pandaids: 6745925219 6745925219
[2025-07-27 09:45:19] 2025-07-27 13:45:19,023 [wrapper] cleanup supervisor_pilot  1518 15512
[2025-07-27 09:45:19] 2025-07-27 13:45:19,028 [wrapper] Test setup, not cleaning
[2025-07-27 09:45:19] 2025-07-27 13:45:19,033 [wrapper] apfmon messages muted
[2025-07-27 09:45:19] 2025-07-27 13:45:19,038 [wrapper] ==== wrapper stdout END ====
[2025-07-27 09:45:19] 2025-07-27 13:45:19,043 [wrapper] ==== wrapper stderr END ====
[2025-07-27 09:45:19]  *** Error codes and diagnostics ***
[2025-07-27 09:45:19]     "exeErrorCode": 0,
[2025-07-27 09:45:19]     "exeErrorDiag": "",
[2025-07-27 09:45:19]     "pilotErrorCode": 0,
[2025-07-27 09:45:19]     "pilotErrorDiag": "",
[2025-07-27 09:45:19]  *** Listing of results directory ***
[2025-07-27 09:45:19] total 655840
[2025-07-27 09:45:19] drwx------ 4 boincer umatlas      4096 Jun 17 06:04 pilot3
[2025-07-27 09:45:19] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 20:36 pilot3.tar.gz
[2025-07-27 09:45:19] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 20:51 queuedata.json
[2025-07-27 09:45:19] -rwx------ 1 boincer umatlas     36292 Jul 26 20:52 runpilot2-wrapper.sh
[2025-07-27 09:45:19] -rw-r--r-- 1 boincer umatlas       100 Jul 27 04:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 09:45:19] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 04:49 run_atlas
[2025-07-27 09:45:19] -rw-r--r-- 1 boincer umatlas       105 Jul 27 04:49 job.xml
[2025-07-27 09:45:19] -rw-r--r-- 3 boincer umatlas 243962262 Jul 27 04:49 EVNT.45758728._000002.pool.root.1
[2025-07-27 09:45:19] -rw-r--r-- 3 boincer umatlas 243962262 Jul 27 04:49 ATLAS.root_0
[2025-07-27 09:45:19] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 04:49 start_atlas.sh
[2025-07-27 09:45:19] drwxrwx--x 2 boincer umatlas      4096 Jul 27 04:49 shared
[2025-07-27 09:45:19] -rw-r--r-- 2 boincer umatlas    542882 Jul 27 04:49 input.tar.gz
[2025-07-27 09:45:19] -rw-r--r-- 1 boincer umatlas         0 Jul 27 04:49 boinc_lockfile
[2025-07-27 09:45:19] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 07:11 pandaJob.out
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas    980117 Jul 27 07:12 agis_schedconf.cvmfs.json
[2025-07-27 09:45:19] -rw-r--r-- 1 boincer umatlas      5827 Jul 27 09:37 init_data.xml
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas 177458293 Jul 27 09:43 HITS.45758730._000026.pool.root.1
[2025-07-27 09:45:19] -rw-r--r-- 1 boincer umatlas       532 Jul 27 09:44 boinc_task_state.xml
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas      1049 Jul 27 09:44 memory_monitor_summary.json
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas   1593052 Jul 27 09:44 agis_ddmendpoints.agis.ALL.json
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas    331119 Jul 27 09:44 log.45758730._000026.job.log.tgz.1
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas      7835 Jul 27 09:44 heartbeat.json
[2025-07-27 09:45:19] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 09:45 boinc_mmap_file
[2025-07-27 09:45:19] -rw-r--r-- 1 boincer umatlas        29 Jul 27 09:45 wrapper_checkpoint.txt
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas       745 Jul 27 09:45 pilotlog.txt
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas        96 Jul 27 09:45 pilot_heartbeat.json
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas    828170 Jul 27 09:45 log.45758730._000026.job.log.1
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas       357 Jul 27 09:45 output.list
[2025-07-27 09:45:19] -rw-r--r-- 1 boincer umatlas       620 Jul 27 09:45 runtime_log
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas   1177600 Jul 27 09:45 result.tar.gz
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas       786 Jul 27 09:45 vQKODmon4z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhhTLDm9sKEKm.diag
[2025-07-27 09:45:19] -rw-r--r-- 1 boincer umatlas      8745 Jul 27 09:45 runtime_log.err
[2025-07-27 09:45:19] -rw-r--r-- 1 boincer umatlas     23032 Jul 27 09:45 stderr.txt
[2025-07-27 09:45:19] HITS file was successfully produced:
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas 177458293 Jul 27 09:43 shared/HITS.pool.root.1
[2025-07-27 09:45:19]  *** Contents of shared directory: ***
[2025-07-27 09:45:19] total 413252
[2025-07-27 09:45:19] -rw-r--r-- 3 boincer umatlas 243962262 Jul 27 04:49 ATLAS.root_0
[2025-07-27 09:45:19] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 04:49 start_atlas.sh
[2025-07-27 09:45:19] -rw-r--r-- 2 boincer umatlas    542882 Jul 27 04:49 input.tar.gz
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas 177458293 Jul 27 09:43 HITS.pool.root.1
[2025-07-27 09:45:19] -rw------- 1 boincer umatlas   1177600 Jul 27 09:45 result.tar.gz
09:45:20 (11767): run_atlas exited; CPU time 68056.603697
09:45:20 (11767): called boinc_finish(0)

</stderr_txt>
]]>

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