Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:18:16 (2737801): wrapper (7.7.26015): starting
23:18:16 (2737801): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 23:18:16] Arguments: --nthreads 4
[2025-07-27 23:18:16] Threads: 4
[2025-07-27 23:18:16] Checking for CVMFS
[2025-07-27 23:18:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:18:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:18:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:18:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:18:16] 2.9.2.0 1182806 4535 97436 148825 2 56 36612140 36864001 0 130560 0 4209521 99.992 166061 2060 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 23:18:16] CVMFS is ok
[2025-07-27 23:18:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:18:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:18:16] Further information can be found at the LHC@home message board.
[2025-07-27 23:18:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:18:16] Checking for apptainer binary...
[2025-07-27 23:18:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 23:18:16] Running /usr/bin/apptainer --version
[2025-07-27 23:18:16] apptainer version 1.4.1-1.1
[2025-07-27 23:18:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:18:16] thA369a
[2025-07-27 23:18:16] apptainer works
[2025-07-27 23:18:16] Set ATHENA_PROC_NUMBER=4
[2025-07-27 23:18:16] Set ATHENA_CORE_NUMBER=4
[2025-07-27 23:18:16] Starting ATLAS job with PandaID=6745973825
[2025-07-27 23:18:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:43:26]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:43:26]  is_altstaged=None
[2025-07-28 00:43:26]  is_tar=False
[2025-07-28 00:43:26]  lfn=log.45759839._000078.job.log.tgz.1
[2025-07-28 00:43:26]  mtime=0
[2025-07-28 00:43:26]  protocol_id=None
[2025-07-28 00:43:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 00:43:26]  replicas=None
[2025-07-28 00:43:26]  scope=mc23_13p6TeV
[2025-07-28 00:43:26]  status=None
[2025-07-28 00:43:26]  status_code=0
[2025-07-28 00:43:26]  storage_token=
[2025-07-28 00:43:26]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745973825/log.45759839._000078.job.log.tgz.1
[2025-07-28 00:43:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/05/log.45759839._000078.job.log.tgz.1
[2025-07-28 00:43:26]  workdir=None
[2025-07-28 00:43:26] ]
[2025-07-28 00:43:26] 2025-07-27 22:42:49,599 | INFO     | transferring file log.45759839._000078.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745973825/log.45759839._000078.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 00:43:26] 2025-07-27 22:42:49,599 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745973825/log.45759839._000078.job.log.tgz.1 /local/data/boinc/slots/0/log.45759839._0000
[2025-07-28 00:43:26] 2025-07-27 22:42:49,611 | INFO     | adding to output.list: log.45759839._000078.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/05/log.45759839._000078.job.log.tg
[2025-07-28 00:43:26] 2025-07-27 22:42:49,612 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 00:43:26] 2025-07-27 22:42:49,612 | INFO     | summary of transferred files:
[2025-07-28 00:43:26] 2025-07-27 22:42:49,612 | INFO     |  -- lfn=log.45759839._000078.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 00:43:26] 2025-07-27 22:42:49,612 | INFO     | stage-out finished correctly
[2025-07-28 00:43:26] 2025-07-27 22:42:49,641 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 00:43:26] 2025-07-27 22:42:50,642 | INFO     | job 6745973825 has state=finished
[2025-07-28 00:43:26] 2025-07-27 22:42:50,642 | INFO     | preparing for final server update for job 6745973825 in state='finished'
[2025-07-28 00:43:26] 2025-07-27 22:42:50,642 | INFO     | this job has now completed (state=finished)
[2025-07-28 00:43:26] 2025-07-27 22:42:50,642 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 00:43:26] 2025-07-27 22:42:50,642 | INFO     | log transfer has been attempted: DONE
[2025-07-28 00:43:26] 2025-07-27 22:42:50,643 | INFO     | job 6745973825 has finished - writing final server update
[2025-07-28 00:43:26] 2025-07-27 22:42:50,643 | INFO     | total number of processed events: 400 (read)
[2025-07-28 00:43:26] 2025-07-27 22:42:50,643 | INFO     | executing command: lscpu
[2025-07-28 00:43:26] 2025-07-27 22:42:50,659 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 00:43:26] 2025-07-27 22:42:53,955 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 00:43:26] 2025-07-27 22:42:53,957 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3689.8538124999995
[2025-07-28 00:43:26] 2025-07-27 22:42:53,958 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745973825/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:43:26] 2025-07-27 22:42:53,958 | INFO     | extracted standard info from prmon json
[2025-07-28 00:43:26] 2025-07-27 22:42:53,958 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:43:26] 2025-07-27 22:42:53,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:43:26] 2025-07-27 22:42:53,958 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:43:26] 2025-07-27 22:42:53,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:43:26] 2025-07-27 22:42:53,959 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:43:26] 2025-07-27 22:42:53,959 | INFO     | sum of square deviations: 136095575.0
[2025-07-28 00:43:26] 2025-07-27 22:42:53,959 | INFO     | sum of deviations: -16511840327.000002
[2025-07-28 00:43:26] 2025-07-27 22:42:53,959 | INFO     | mean x: 1753653713.5
[2025-07-28 00:43:26] 2025-07-27 22:42:53,959 | INFO     | mean y: 2571515.8684210526
[2025-07-28 00:43:26] 2025-07-27 22:42:53,959 | INFO     | -- intersect: 212765184158.95108
[2025-07-28 00:43:26] 2025-07-27 22:42:53,959 | INFO     | intersect: 212765184158.95108
[2025-07-28 00:43:26] 2025-07-27 22:42:53,959 | INFO     | chi2: 0.05514653279674181
[2025-07-28 00:43:26] 2025-07-27 22:42:53,959 | INFO     | -- intersect: 212765184158.95108
[2025-07-28 00:43:26] 2025-07-27 22:42:53,959 | INFO     | current memory leak: -121.33 B/s (using 76 data points, chi2=0.06)
[2025-07-28 00:43:26] 2025-07-27 22:42:53,960 | INFO     | could have reported an average CPU frequency of 3944 MHz (6 samples)
[2025-07-28 00:43:26] 2025-07-27 22:42:53,960 | INFO     | ..............................
[2025-07-28 00:43:26] 2025-07-27 22:42:53,960 | INFO     | . Timing measurements:
[2025-07-28 00:43:26] 2025-07-27 22:42:53,960 | INFO     | . get job = 0 s
[2025-07-28 00:43:26] 2025-07-27 22:42:53,960 | INFO     | . initial setup = 1 s
[2025-07-28 00:43:26] 2025-07-27 22:42:53,960 | INFO     | . payload setup = 3 s
[2025-07-28 00:43:26] 2025-07-27 22:42:53,960 | INFO     | . stage-in = 0 s
[2025-07-28 00:43:26] 2025-07-27 22:42:53,960 | INFO     | . payload execution = 5047 s
[2025-07-28 00:43:26] 2025-07-27 22:42:53,960 | INFO     | . stage-out = 0 s
[2025-07-28 00:43:26] 2025-07-27 22:42:53,960 | INFO     | . log creation = 0 s
[2025-07-28 00:43:26] 2025-07-27 22:42:53,960 | INFO     | ..............................
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | 
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | job summary report
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | --------------------------------------------------
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | PanDA job id: 6745973825
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | task id: 45759839
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | errors: (none)
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | pilot state: finished 
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | transexitcode: 0
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | exeerrorcode: 0
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | exeerrordiag: 
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | exitcode: 0
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | exitmsg: OK
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | cpuconsumptiontime: 19329 s
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | nevents: 400
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | neventsw: 0
[2025-07-28 00:43:26] 2025-07-27 22:42:53,990 | INFO     | pid: 2748081
[2025-07-28 00:43:26] 2025-07-27 22:42:53,991 | INFO     | pgrp: 2748081
[2025-07-28 00:43:26] 2025-07-27 22:42:53,991 | INFO     | corecount: 4
[2025-07-28 00:43:26] 2025-07-27 22:42:53,991 | INFO     | event service: False
[2025-07-28 00:43:26] 2025-07-27 22:42:53,991 | INFO     | sizes: {0: 2397484, 2: 2397746, 10: 2397774, 5054: 2433232, 5059: 2433370}
[2025-07-28 00:43:26] 2025-07-27 22:42:53,991 | INFO     | --------------------------------------------------
[2025-07-28 00:43:26] 2025-07-27 22:42:53,991 | INFO     | 
[2025-07-28 00:43:26] 2025-07-27 22:42:53,991 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 00:43:26] 2025-07-27 22:42:54,002 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,002 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,002 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | job 6745973825 has completed (purged errors)
[2025-07-28 00:43:26] 2025-07-27 22:42:54,003 | INFO     | overall cleanup function is called
[2025-07-28 00:43:26] 2025-07-27 22:42:55,009 | INFO     | --- collectZombieJob: --- 10, [2748081]
[2025-07-28 00:43:26] 2025-07-27 22:42:55,009 | INFO     | zombie collector waiting for pid 2748081
[2025-07-28 00:43:26] 2025-07-27 22:42:55,009 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:43:26] 2025-07-27 22:42:55,009 | INFO     | collected zombie processes
[2025-07-28 00:43:26] 2025-07-27 22:42:55,009 | INFO     | will attempt to kill all subprocesses of pid=2748081
[2025-07-28 00:43:26] 2025-07-27 22:42:55,051 | INFO     | process IDs to be killed: [2748081] (in reverse order)
[2025-07-28 00:43:26] 2025-07-27 22:42:55,074 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:43:26] 2025-07-27 22:42:55,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:43:26] 2025-07-27 22:42:55,076 | INFO     | did not find any defunct processes belonging to 2748081
[2025-07-28 00:43:26] 2025-07-27 22:42:55,077 | INFO     | did not find any defunct processes belonging to 2748081
[2025-07-28 00:43:26] 2025-07-27 22:42:55,077 | INFO     | ready for new job
[2025-07-28 00:43:26] 2025-07-27 22:42:55,077 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:43:26] 2025-07-27 22:42:55,077 | INFO     | ***************************************
[2025-07-28 00:43:26] 2025-07-27 22:42:55,077 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:43:26] 2025-07-27 22:42:55,077 | INFO     | ***************************************
[2025-07-28 00:43:26] 2025-07-27 22:42:55,077 | INFO     | 
[2025-07-28 00:43:26] 2025-07-27 22:42:55,078 | INFO     | architecture information:
[2025-07-28 00:43:26] 2025-07-27 22:42:55,078 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:43:26] 2025-07-27 22:42:55,086 | INFO     | cat /etc/os-release:
[2025-07-28 00:43:26] NAME="CentOS Linux"
[2025-07-28 00:43:26] VERSION="7 (Core)"
[2025-07-28 00:43:26] ID="centos"
[2025-07-28 00:43:26] ID_LIKE="rhel fedora"
[2025-07-28 00:43:26] VERSION_ID="7"
[2025-07-28 00:43:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:43:26] ANSI_COLOR="0;31"
[2025-07-28 00:43:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:43:26] HOME_URL="https://www.centos.org/"
[2025-07-28 00:43:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:43:26] 
[2025-07-28 00:43:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:43:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:43:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:43:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:43:26] 
[2025-07-28 00:43:26] 2025-07-27 22:42:55,087 | INFO     | ***************************************
[2025-07-28 00:43:26] 2025-07-27 22:42:55,590 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 00:43:26] 2025-07-27 22:42:55,602 | INFO     | sufficient remaining disk space (217846906880 B)
[2025-07-28 00:43:26] 2025-07-27 22:42:55,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:43:26] 2025-07-27 22:42:55,602 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:43:26] 2025-07-27 22:42:55,602 | INFO     | update_server=False
[2025-07-28 00:43:26] 2025-07-27 22:42:55,602 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:43:26] 2025-07-27 22:42:55,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:43:26] 2025-07-27 22:42:55,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:43:26] 2025-07-27 22:42:55,675 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:43:26] 2025-07-27 22:42:55,720 | INFO     | all payload control threads have been joined
[2025-07-28 00:43:26] 2025-07-27 22:42:55,815 | INFO     | all job control threads have been joined
[2025-07-28 00:43:26] 2025-07-27 22:42:55,867 | WARNING  | process 2748081 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 00:43:26] 2025-07-27 22:42:55,895 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:43:26] 2025-07-27 22:42:55,929 | INFO     | number of running child processes to parent process 2748081: 1
[2025-07-28 00:43:26] 2025-07-27 22:42:55,929 | INFO     | maximum number of monitored processes: 6
[2025-07-28 00:43:26] 2025-07-27 22:42:55,929 | INFO     | aborting job monitoring since job object (job id=6745973825) has expired
[2025-07-28 00:43:26] 2025-07-27 22:42:55,929 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:43:26] 2025-07-27 22:42:55,930 | INFO     | will abort loop
[2025-07-28 00:43:26] 2025-07-27 22:42:56,112 | INFO     | all data control threads have been joined
[2025-07-28 00:43:26] 2025-07-27 22:42:56,608 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:42:56,608 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:42:56,682 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:42:56,726 | INFO     | [payload] control thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:42:56,754 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:42:56,821 | INFO     | [job] control thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:42:56,935 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:42:57,118 | INFO     | [data] control thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:42:57,269 | INFO     | [job] validate thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:42:57,296 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:42:57,403 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:42:57,497 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:42:57,608 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:42:57,831 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:42:59,682 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:43:06,082 | INFO     | job.realtimelogging is not enabled
[2025-07-28 00:43:26] 2025-07-27 22:43:07,087 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:43:26] 2025-07-27 22:43:07,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139716281579328)>', '<ExcThread(monitor, started 139715781043968)>']
[2025-07-28 00:43:26] 2025-07-27 22:43:12,113 | INFO     | all workflow threads have been joined
[2025-07-28 00:43:26] 2025-07-27 22:43:12,114 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:43:26] 2025-07-27 22:43:12,114 | INFO     | traces error code: 0
[2025-07-28 00:43:26] 2025-07-27 22:43:12,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:43:26] 2025-07-27 22:43:26,523 | INFO     | PID=2741493 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:43:26] 2025-07-27 22:43:26,523 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:43:26] 2025-07-27 22:43:26,523 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:43:26] 2025-07-27 22:43:26,524 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:43:26] 2025-07-27 22:43:26,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:43:26] 2025-07-27 22:43:26,524 | INFO     | [monitor] control thread has ended
[2025-07-28 00:43:26] 2025-07-27 22:43:26,569 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:43:26] 2025-07-27 22:43:26,572 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:43:26] 2025-07-27 22:43:26,574 [wrapper] pilotpid: 2741493
[2025-07-28 00:43:26] 2025-07-27 22:43:26,576 [wrapper] Pilot exit status: 0
[2025-07-28 00:43:26] 2025-07-27 22:43:26,583 [wrapper] pandaids: 6745973825
[2025-07-28 00:43:26] 2025-07-27 22:43:26,599 [wrapper] cleanup supervisor_pilot 2760162 2741494
[2025-07-28 00:43:26] 2025-07-27 22:43:26,602 [wrapper] Test setup, not cleaning
[2025-07-28 00:43:26] 2025-07-27 22:43:26,604 [wrapper] apfmon messages muted
[2025-07-28 00:43:26] 2025-07-27 22:43:26,606 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:43:26] 2025-07-27 22:43:26,608 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:43:26]  *** Error codes and diagnostics ***
[2025-07-28 00:43:26]     "exeErrorCode": 0,
[2025-07-28 00:43:26]     "exeErrorDiag": "",
[2025-07-28 00:43:26]     "pilotErrorCode": 0,
[2025-07-28 00:43:26]     "pilotErrorDiag": "",
[2025-07-28 00:43:26]  *** Listing of results directory ***
[2025-07-28 00:43:26] total 405476
[2025-07-28 00:43:26] -rw-r--r-- 1 boinc boinc    530466 Jul 27 05:36 pilot3.tar.gz
[2025-07-28 00:43:26] -rw-r--r-- 1 boinc boinc      5112 Jul 27 05:39 queuedata.json
[2025-07-28 00:43:26] -rwx------ 1 boinc boinc     36292 Jul 27 05:39 runpilot2-wrapper.sh
[2025-07-28 00:43:26] -rw-r--r-- 1 boinc boinc       100 Jul 27 23:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:43:26] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 23:18 run_atlas
[2025-07-28 00:43:26] -rw-r--r-- 1 boinc boinc       105 Jul 27 23:18 job.xml
[2025-07-28 00:43:26] -rw-r--r-- 2 boinc boinc 236740061 Jul 27 23:18 EVNT.45759835._000004.pool.root.1
[2025-07-28 00:43:26] -rw-r--r-- 2 boinc boinc    542888 Jul 27 23:18 input.tar.gz
[2025-07-28 00:43:26] -rw-r--r-- 2 boinc boinc     15095 Jul 27 23:18 start_atlas.sh
[2025-07-28 00:43:26] drwxrwx--x 2 boinc boinc      4096 Jul 27 23:18 shared
[2025-07-28 00:43:26] -rw-r--r-- 1 boinc boinc         0 Jul 27 23:18 boinc_setup_complete
[2025-07-28 00:43:26] -rw-r--r-- 1 boinc boinc      6444 Jul 27 23:18 init_data.xml
[2025-07-28 00:43:26] -rw-r--r-- 1 boinc boinc         0 Jul 27 23:18 boinc_lockfile
[2025-07-28 00:43:26] -rw-r--r-- 1 boinc boinc      2575 Jul 27 23:18 pandaJob.out
[2025-07-28 00:43:26] -rw------- 1 boinc boinc    980117 Jul 27 23:18 agis_schedconf.cvmfs.json
[2025-07-28 00:43:26] -rw------- 1 boinc boinc   1593052 Jul 27 23:18 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:43:26] drwx------ 4 boinc boinc      4096 Jul 27 23:18 pilot3
[2025-07-28 00:43:26] -rw------- 1 boinc boinc 173129853 Jul 28 00:42 HITS.45759839._000078.pool.root.1
[2025-07-28 00:43:26] -rw-r--r-- 1 boinc boinc       529 Jul 28 00:42 boinc_task_state.xml
[2025-07-28 00:43:26] -rw------- 1 boinc boinc      1018 Jul 28 00:42 memory_monitor_summary.json
[2025-07-28 00:43:26] -rw------- 1 boinc boinc        95 Jul 28 00:42 pilot_heartbeat.json
[2025-07-28 00:43:26] -rw------- 1 boinc boinc    234341 Jul 28 00:42 log.45759839._000078.job.log.tgz.1
[2025-07-28 00:43:26] -rw------- 1 boinc boinc      7753 Jul 28 00:42 heartbeat.json
[2025-07-28 00:43:26] -rw-r--r-- 1 boinc boinc        27 Jul 28 00:43 wrapper_checkpoint.txt
[2025-07-28 00:43:26] -rw-r--r-- 1 boinc boinc      8192 Jul 28 00:43 boinc_mmap_file
[2025-07-28 00:43:26] -rw------- 1 boinc boinc       747 Jul 28 00:43 pilotlog.txt
[2025-07-28 00:43:26] -rw------- 1 boinc boinc    493698 Jul 28 00:43 log.45759839._000078.job.log.1
[2025-07-28 00:43:26] -rw------- 1 boinc boinc       357 Jul 28 00:43 output.list
[2025-07-28 00:43:26] -rw-r--r-- 1 boinc boinc       620 Jul 28 00:43 runtime_log
[2025-07-28 00:43:26] -rw------- 1 boinc boinc    747520 Jul 28 00:43 result.tar.gz
[2025-07-28 00:43:26] -rw-r--r-- 1 boinc boinc      8739 Jul 28 00:43 runtime_log.err
[2025-07-28 00:43:26] -rw------- 1 boinc boinc       660 Jul 28 00:43 WxnKDmuP7z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYs1KDm0xieBo.diag
[2025-07-28 00:43:26] -rw-r--r-- 1 boinc boinc     21455 Jul 28 00:43 stderr.txt
[2025-07-28 00:43:26] HITS file was successfully produced:
[2025-07-28 00:43:26] -rw------- 1 boinc boinc 173129853 Jul 28 00:42 shared/HITS.pool.root.1
[2025-07-28 00:43:26]  *** Contents of shared directory: ***
[2025-07-28 00:43:26] total 401556
[2025-07-28 00:43:26] -rw-r--r-- 2 boinc boinc 236740061 Jul 27 23:18 ATLAS.root_0
[2025-07-28 00:43:26] -rw-r--r-- 2 boinc boinc    542888 Jul 27 23:18 input.tar.gz
[2025-07-28 00:43:26] -rw-r--r-- 2 boinc boinc     15095 Jul 27 23:18 start_atlas.sh
[2025-07-28 00:43:26] -rw------- 1 boinc boinc 173129853 Jul 28 00:42 HITS.pool.root.1
[2025-07-28 00:43:26] -rw------- 1 boinc boinc    747520 Jul 28 00:43 result.tar.gz
00:43:28 (2737801): run_atlas exited; CPU time 19345.235707
00:43:28 (2737801): called boinc_finish(0)

</stderr_txt>
]]>

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