Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:11:41 (950021): wrapper (7.7.26015): starting
17:11:41 (950021): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 17:11:41] Arguments: --nthreads 4
[2025-07-29 17:11:41] Threads: 4
[2025-07-29 17:11:41] Checking for CVMFS
[2025-07-29 17:11:41] No cvmfs_config command found, will try listing directly
[2025-07-29 17:11:41] CVMFS is ok
[2025-07-29 17:11:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 17:11:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 17:11:41] Further information can be found at the LHC@home message board.
[2025-07-29 17:11:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 17:11:41] Checking for apptainer binary...
[2025-07-29 17:11:41] which: no apptainer in ((null))
[2025-07-29 17:11:41] apptainer is not installed, using version from CVMFS
[2025-07-29 17:11:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 17:11:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-07-29 17:11:41] apptainer works
[2025-07-29 17:11:41] Set ATHENA_PROC_NUMBER=4
[2025-07-29 17:11:41] Set ATHENA_CORE_NUMBER=4
[2025-07-29 17:11:41] Starting ATLAS job with PandaID=6745968066
[2025-07-29 17:11:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:08:18 (1519466): wrapper (7.7.26015): starting
21:08:18 (1519466): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 21:08:18] Arguments: --nthreads 4
[2025-07-29 21:08:18] Threads: 4
[2025-07-29 21:08:18] This job has been restarted, cleaning up previous attempt
[2025-07-29 21:08:18] Checking for CVMFS
[2025-07-29 21:08:18] No cvmfs_config command found, will try listing directly
[2025-07-29 21:08:18] CVMFS is ok
[2025-07-29 21:08:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 21:08:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 21:08:18] Further information can be found at the LHC@home message board.
[2025-07-29 21:08:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 21:08:18] Checking for apptainer binary...
[2025-07-29 21:08:18] which: no apptainer in ((null))
[2025-07-29 21:08:18] apptainer is not installed, using version from CVMFS
[2025-07-29 21:08:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 21:08:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-07-29 21:08:18] apptainer works
[2025-07-29 21:08:18] Set ATHENA_PROC_NUMBER=4
[2025-07-29 21:08:18] Set ATHENA_CORE_NUMBER=4
[2025-07-29 21:08:18] Starting ATLAS job with PandaID=6745968066
[2025-07-29 21:08:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-30 01:43:58]  *** The last 200 lines of the pilot log: ***
[2025-07-30 01:43:58] 2025-07-29 23:43:25,692 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-30 01:43:58] 2025-07-29 23:43:25,693 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-30 01:43:58] 2025-07-29 23:43:25,698 | INFO     | fitting pss+swap vs Time
[2025-07-30 01:43:58] 2025-07-29 23:43:25,698 | INFO     | sum of square deviations: 6103286527.5
[2025-07-30 01:43:58] 2025-07-29 23:43:25,700 | INFO     | sum of deviations: 42585080330.999985
[2025-07-30 01:43:58] 2025-07-29 23:43:25,700 | INFO     | mean x: 1753824339.5
[2025-07-30 01:43:58] 2025-07-29 23:43:25,700 | INFO     | mean y: 2316365.940740741
[2025-07-30 01:43:58] 2025-07-29 23:43:25,701 | INFO     | -- intersect: -12234820141.996292
[2025-07-30 01:43:58] 2025-07-29 23:43:25,701 | INFO     | intersect: -12234820141.996292
[2025-07-30 01:43:58] 2025-07-29 23:43:25,701 | INFO     | chi2: 1.4331146567239617
[2025-07-30 01:43:58] 2025-07-29 23:43:25,702 | INFO     | sum of square deviations: 5770452380.0
[2025-07-30 01:43:58] 2025-07-29 23:43:25,704 | INFO     | sum of deviations: 41649257066.00001
[2025-07-30 01:43:58] 2025-07-29 23:43:25,704 | INFO     | mean x: 1753824187.0
[2025-07-30 01:43:58] 2025-07-29 23:43:25,704 | INFO     | mean y: 2315937.1056603775
[2025-07-30 01:43:58] 2025-07-29 23:43:25,704 | INFO     | -- intersect: -12656219235.30165
[2025-07-30 01:43:58] 2025-07-29 23:43:25,704 | INFO     | intersect: -12656219235.30165
[2025-07-30 01:43:58] 2025-07-29 23:43:25,704 | INFO     | chi2: 1.433524675174286
[2025-07-30 01:43:58] 2025-07-29 23:43:25,704 | INFO     | current chi2=1.433524675174286 (change=-0.028610303327835984 %)
[2025-07-30 01:43:58] 2025-07-29 23:43:25,705 | INFO     | right removable region: 264
[2025-07-30 01:43:58] 2025-07-29 23:43:25,705 | INFO     | sum of square deviations: 5770452380.0
[2025-07-30 01:43:58] 2025-07-29 23:43:25,707 | INFO     | sum of deviations: 4838540679.000005
[2025-07-30 01:43:58] 2025-07-29 23:43:25,707 | INFO     | mean x: 1753824492.0
[2025-07-30 01:43:58] 2025-07-29 23:43:25,707 | INFO     | mean y: 2333509.720754717
[2025-07-30 01:43:58] 2025-07-29 23:43:25,707 | INFO     | -- intersect: -1468253298.6515412
[2025-07-30 01:43:58] 2025-07-29 23:43:25,707 | INFO     | intersect: -1468253298.6515412
[2025-07-30 01:43:58] 2025-07-29 23:43:25,708 | INFO     | chi2: 0.013712281620395629
[2025-07-30 01:43:58] 2025-07-29 23:43:25,708 | INFO     | current chi2=0.013712281620395629 (change=99.04318321244851 %)
[2025-07-30 01:43:58] 2025-07-29 23:43:25,708 | INFO     | sum of square deviations: 5449944045.0
[2025-07-30 01:43:58] 2025-07-29 23:43:25,710 | INFO     | sum of deviations: 3404946769.499999
[2025-07-30 01:43:58] 2025-07-29 23:43:25,710 | INFO     | mean x: 1753824644.5
[2025-07-30 01:43:58] 2025-07-29 23:43:25,710 | INFO     | mean y: 2334176.6884615384
[2025-07-30 01:43:58] 2025-07-29 23:43:25,711 | INFO     | -- intersect: -1093398092.9003282
[2025-07-30 01:43:58] 2025-07-29 23:43:25,711 | INFO     | intersect: -1093398092.9003282
[2025-07-30 01:43:58] 2025-07-29 23:43:25,711 | INFO     | chi2: 0.0040219190562758005
[2025-07-30 01:43:58] 2025-07-29 23:43:25,711 | INFO     | current chi2=0.0040219190562758005 (change=70.66922072039709 %)
[2025-07-30 01:43:58] 2025-07-29 23:43:25,712 | INFO     | sum of square deviations: 5141528960.0
[2025-07-30 01:43:58] 2025-07-29 23:43:25,713 | INFO     | sum of deviations: 3075777623.9999995
[2025-07-30 01:43:58] 2025-07-29 23:43:25,714 | INFO     | mean x: 1753824797.0
[2025-07-30 01:43:58] 2025-07-29 23:43:25,714 | INFO     | mean y: 2334338.807843137
[2025-07-30 01:43:58] 2025-07-29 23:43:25,714 | INFO     | -- intersect: -1046842882.4032073
[2025-07-30 01:43:58] 2025-07-29 23:43:25,714 | INFO     | intersect: -1046842882.4032073
[2025-07-30 01:43:58] 2025-07-29 23:43:25,714 | INFO     | chi2: 0.003995473936868918
[2025-07-30 01:43:58] 2025-07-29 23:43:25,714 | INFO     | current chi2=0.003995473936868918 (change=0.6575249038296235 %)
[2025-07-30 01:43:58] 2025-07-29 23:43:25,714 | INFO     | left removable region: 30
[2025-07-30 01:43:58] 2025-07-29 23:43:25,715 | INFO     | sum of square deviations: 3972995422.5
[2025-07-30 01:43:58] 2025-07-29 23:43:25,716 | INFO     | sum of deviations: 4926898050.500001
[2025-07-30 01:43:58] 2025-07-29 23:43:25,717 | INFO     | mean x: 1753825071.5
[2025-07-30 01:43:58] 2025-07-29 23:43:25,717 | INFO     | mean y: 2333055.918803419
[2025-07-30 01:43:58] 2025-07-29 23:43:25,717 | INFO     | -- intersect: -2172579423.656644
[2025-07-30 01:43:58] 2025-07-29 23:43:25,717 | INFO     | intersect: -2172579423.656644
[2025-07-30 01:43:58] 2025-07-29 23:43:25,717 | INFO     | chi2: 0.0013262900248099485
[2025-07-30 01:43:58] 2025-07-29 23:43:25,717 | INFO     | -- intersect: -2172579423.656644
[2025-07-30 01:43:58] 2025-07-29 23:43:25,717 | INFO     | current memory leak: 1.24 B/s (using 234 data points, chi2=0.00)
[2025-07-30 01:43:58] 2025-07-29 23:43:25,718 | INFO     | could have reported an average CPU frequency of 2628 MHz (13 samples)
[2025-07-30 01:43:58] 2025-07-29 23:43:25,718 | INFO     | ..............................
[2025-07-30 01:43:58] 2025-07-29 23:43:25,718 | INFO     | . Timing measurements:
[2025-07-30 01:43:58] 2025-07-29 23:43:25,718 | INFO     | . get job = 0 s
[2025-07-30 01:43:58] 2025-07-29 23:43:25,718 | INFO     | . initial setup = 1 s
[2025-07-30 01:43:58] 2025-07-29 23:43:25,718 | INFO     | . payload setup = 7 s
[2025-07-30 01:43:58] 2025-07-29 23:43:25,719 | INFO     | . stage-in = 0 s
[2025-07-30 01:43:58] 2025-07-29 23:43:25,719 | INFO     | . payload execution = 16465 s
[2025-07-30 01:43:58] 2025-07-29 23:43:25,719 | INFO     | . stage-out = 0 s
[2025-07-30 01:43:58] 2025-07-29 23:43:25,719 | INFO     | . log creation = 0 s
[2025-07-30 01:43:58] 2025-07-29 23:43:25,719 | INFO     | ..............................
[2025-07-30 01:43:58] 2025-07-29 23:43:25,818 | INFO     | 
[2025-07-30 01:43:58] 2025-07-29 23:43:25,818 | INFO     | job summary report
[2025-07-30 01:43:58] 2025-07-29 23:43:25,818 | INFO     | --------------------------------------------------
[2025-07-30 01:43:58] 2025-07-29 23:43:25,818 | INFO     | PanDA job id: 6745968066
[2025-07-30 01:43:58] 2025-07-29 23:43:25,818 | INFO     | task id: 45759215
[2025-07-30 01:43:58] 2025-07-29 23:43:25,818 | INFO     | errors: (none)
[2025-07-30 01:43:58] 2025-07-29 23:43:25,818 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-30 01:43:58] 2025-07-29 23:43:25,818 | INFO     | pilot state: finished 
[2025-07-30 01:43:58] 2025-07-29 23:43:25,819 | INFO     | transexitcode: 0
[2025-07-30 01:43:58] 2025-07-29 23:43:25,819 | INFO     | exeerrorcode: 0
[2025-07-30 01:43:58] 2025-07-29 23:43:25,819 | INFO     | exeerrordiag: 
[2025-07-30 01:43:58] 2025-07-29 23:43:25,819 | INFO     | exitcode: 0
[2025-07-30 01:43:58] 2025-07-29 23:43:25,819 | INFO     | exitmsg: OK
[2025-07-30 01:43:58] 2025-07-29 23:43:25,819 | INFO     | cpuconsumptiontime: 64110 s
[2025-07-30 01:43:58] 2025-07-29 23:43:25,819 | INFO     | nevents: 400
[2025-07-30 01:43:58] 2025-07-29 23:43:25,819 | INFO     | neventsw: 0
[2025-07-30 01:43:58] 2025-07-29 23:43:25,819 | INFO     | pid: 1530341
[2025-07-30 01:43:58] 2025-07-29 23:43:25,819 | INFO     | pgrp: 1530341
[2025-07-30 01:43:58] 2025-07-29 23:43:25,819 | INFO     | corecount: 4
[2025-07-30 01:43:58] 2025-07-29 23:43:25,819 | INFO     | event service: False
[2025-07-30 01:43:58] 2025-07-29 23:43:25,819 | INFO     | sizes: {0: 2391713, 1: 2391968, 5: 2392230, 12: 2392286, 16475: 2424037, 16477: 2433057, 16478: 2433241, 16482: 2433435}
[2025-07-30 01:43:58] 2025-07-29 23:43:25,820 | INFO     | --------------------------------------------------
[2025-07-30 01:43:58] 2025-07-29 23:43:25,820 | INFO     | 
[2025-07-30 01:43:58] 2025-07-29 23:43:25,820 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-07-30 01:43:58] 2025-07-29 23:43:25,840 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,840 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,840 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,840 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,841 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,841 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,841 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,841 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,841 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,841 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,841 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,841 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,841 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,841 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,842 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,842 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-30 01:43:58] 2025-07-29 23:43:25,842 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,842 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-30 01:43:58] 2025-07-29 23:43:25,842 | INFO     | job 6745968066 has completed (purged errors)
[2025-07-30 01:43:58] 2025-07-29 23:43:25,842 | INFO     | overall cleanup function is called
[2025-07-30 01:43:58] 2025-07-29 23:43:26,850 | INFO     | --- collectZombieJob: --- 10, [1530341]
[2025-07-30 01:43:58] 2025-07-29 23:43:26,850 | INFO     | zombie collector waiting for pid 1530341
[2025-07-30 01:43:58] 2025-07-29 23:43:26,850 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-30 01:43:58] 2025-07-29 23:43:26,850 | INFO     | collected zombie processes
[2025-07-30 01:43:58] 2025-07-29 23:43:26,851 | INFO     | will attempt to kill all subprocesses of pid=1530341
[2025-07-30 01:43:58] 2025-07-29 23:43:27,150 | INFO     | process IDs to be killed: [1530341] (in reverse order)
[2025-07-30 01:43:58] 2025-07-29 23:43:27,244 | WARNING  | found no corresponding commands to process id(s)
[2025-07-30 01:43:58] 2025-07-29 23:43:27,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-30 01:43:58] 2025-07-29 23:43:27,254 | INFO     | did not find any defunct processes belonging to 1530341
[2025-07-30 01:43:58] 2025-07-29 23:43:27,263 | INFO     | did not find any defunct processes belonging to 1530341
[2025-07-30 01:43:58] 2025-07-29 23:43:27,264 | INFO     | ready for new job
[2025-07-30 01:43:58] 2025-07-29 23:43:27,264 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-30 01:43:58] 2025-07-29 23:43:27,266 | INFO     | ***************************************
[2025-07-30 01:43:58] 2025-07-29 23:43:27,266 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-30 01:43:58] 2025-07-29 23:43:27,266 | INFO     | ***************************************
[2025-07-30 01:43:58] 2025-07-29 23:43:27,267 | INFO     | 
[2025-07-30 01:43:58] 2025-07-29 23:43:27,270 | INFO     | architecture information:
[2025-07-30 01:43:58] 2025-07-29 23:43:27,271 | INFO     | executing command: cat /etc/os-release
[2025-07-30 01:43:58] 2025-07-29 23:43:27,284 | INFO     | cat /etc/os-release:
[2025-07-30 01:43:58] NAME="CentOS Linux"
[2025-07-30 01:43:58] VERSION="7 (Core)"
[2025-07-30 01:43:58] ID="centos"
[2025-07-30 01:43:58] ID_LIKE="rhel fedora"
[2025-07-30 01:43:58] VERSION_ID="7"
[2025-07-30 01:43:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-30 01:43:58] ANSI_COLOR="0;31"
[2025-07-30 01:43:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-30 01:43:58] HOME_URL="https://www.centos.org/"
[2025-07-30 01:43:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-30 01:43:58] 
[2025-07-30 01:43:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-30 01:43:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-30 01:43:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-30 01:43:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-30 01:43:58] 
[2025-07-30 01:43:58] 2025-07-29 23:43:27,284 | INFO     | ***************************************
[2025-07-30 01:43:58] 2025-07-29 23:43:27,788 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-07-30 01:43:58] 2025-07-29 23:43:27,802 | INFO     | sufficient remaining disk space (701895802880 B)
[2025-07-30 01:43:58] 2025-07-29 23:43:27,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-30 01:43:58] 2025-07-29 23:43:27,802 | INFO     | current server update state: UPDATING_FINAL
[2025-07-30 01:43:58] 2025-07-29 23:43:27,802 | INFO     | update_server=False
[2025-07-30 01:43:58] 2025-07-29 23:43:27,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-30 01:43:58] 2025-07-29 23:43:27,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-30 01:43:58] 2025-07-29 23:43:27,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-30 01:43:58] 2025-07-29 23:43:27,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-30 01:43:58] 2025-07-29 23:43:28,504 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-30 01:43:58] 2025-07-29 23:43:28,504 | INFO     | aborting loop
[2025-07-30 01:43:58] 2025-07-29 23:43:28,545 | INFO     | all payload control threads have been joined
[2025-07-30 01:43:58] 2025-07-29 23:43:28,642 | INFO     | all data control threads have been joined
[2025-07-30 01:43:58] 2025-07-29 23:43:28,808 | INFO     | [job] retrieve thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:28,809 | INFO     | [job] queue monitor thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:29,218 | INFO     | [payload] execute_payloads thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:29,250 | INFO     | [job] create_data_payload thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:29,250 | INFO     | [job] validate thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:29,251 | INFO     | all job control threads have been joined
[2025-07-30 01:43:58] 2025-07-29 23:43:29,509 | INFO     | [job] job monitor thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:29,551 | INFO     | [payload] control thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:29,553 | INFO     | [payload] validate_pre thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:29,648 | INFO     | [data] control thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:29,809 | INFO     | [data] copytool_out thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:29,853 | INFO     | [payload] validate_post thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:30,256 | INFO     | [job] control thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:30,263 | INFO     | [data] copytool_in thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:30,333 | INFO     | [payload] failed_post thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:31,836 | INFO     | [data] queue_monitor thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:37,989 | INFO     | job.realtimelogging is not enabled
[2025-07-30 01:43:58] 2025-07-29 23:43:38,994 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-30 01:43:58] 2025-07-29 23:43:41,060 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23415832123200)>', '<ExcThread(monitor, started 23415595435776)>']
[2025-07-30 01:43:58] 2025-07-29 23:43:46,086 | INFO     | all workflow threads have been joined
[2025-07-30 01:43:58] 2025-07-29 23:43:46,086 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-30 01:43:58] 2025-07-29 23:43:46,086 | INFO     | traces error code: 0
[2025-07-30 01:43:58] 2025-07-29 23:43:46,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-30 01:43:58] 2025-07-29 23:43:58,306 | INFO     | PID=1523251 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-30 01:43:58] 2025-07-29 23:43:58,306 | INFO     | .. there are 13 such processes running
[2025-07-30 01:43:58] 2025-07-29 23:43:58,307 | INFO     | found 0 job(s) in 20 queues
[2025-07-30 01:43:58] 2025-07-29 23:43:58,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-30 01:43:58] 2025-07-29 23:43:58,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-30 01:43:58] 2025-07-29 23:43:58,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-30 01:43:58] 2025-07-29 23:43:58,307 | CRITICAL | thread 'MainThread' is not alive
[2025-07-30 01:43:58] 2025-07-29 23:43:58,308 | INFO     | [monitor] control thread has ended
[2025-07-30 01:43:58] 2025-07-29 23:43:58,440 [wrapper] ==== pilot stdout END ====
[2025-07-30 01:43:58] 2025-07-29 23:43:58,443 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-30 01:43:58] 2025-07-29 23:43:58,445 [wrapper] pilotpid: 1523251
[2025-07-30 01:43:58] 2025-07-29 23:43:58,448 [wrapper] Pilot exit status: 0
[2025-07-30 01:43:58] 2025-07-29 23:43:58,457 [wrapper] pandaids: 6745968066 6745968066
[2025-07-30 01:43:58] 2025-07-29 23:43:58,516 [wrapper] cleanup supervisor_pilot 2211685 1523252
[2025-07-30 01:43:58] 2025-07-29 23:43:58,518 [wrapper] Test setup, not cleaning
[2025-07-30 01:43:58] 2025-07-29 23:43:58,521 [wrapper] apfmon messages muted
[2025-07-30 01:43:58] 2025-07-29 23:43:58,523 [wrapper] ==== wrapper stdout END ====
[2025-07-30 01:43:58] 2025-07-29 23:43:58,526 [wrapper] ==== wrapper stderr END ====
[2025-07-30 01:43:58]  *** Error codes and diagnostics ***
[2025-07-30 01:43:58]     "exeErrorCode": 0,
[2025-07-30 01:43:58]     "exeErrorDiag": "",
[2025-07-30 01:43:58]     "pilotErrorCode": 0,
[2025-07-30 01:43:58]     "pilotErrorDiag": "",
[2025-07-30 01:43:58]  *** Listing of results directory ***
[2025-07-30 01:43:58] total 587904
[2025-07-30 01:43:58] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-30 01:43:58] -rw-r--r-- 1 boinc boinc    530466 Jul 27 05:31 pilot3.tar.gz
[2025-07-30 01:43:58] -rw-r--r-- 1 boinc boinc      5112 Jul 27 05:34 queuedata.json
[2025-07-30 01:43:58] -rwx------ 1 boinc boinc     36292 Jul 27 05:34 runpilot2-wrapper.sh
[2025-07-30 01:43:58] -rw-r--r-- 1 boinc boinc       100 Jul 29 17:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-30 01:43:58] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 17:11 run_atlas
[2025-07-30 01:43:58] -rw-r--r-- 1 boinc boinc       105 Jul 29 17:11 job.xml
[2025-07-30 01:43:58] -rw-r--r-- 3 boinc boinc 216268291 Jul 29 17:11 EVNT.45759207._000005.pool.root.1
[2025-07-30 01:43:58] -rw-r--r-- 3 boinc boinc 216268291 Jul 29 17:11 ATLAS.root_0
[2025-07-30 01:43:58] -rw-r--r-- 2 boinc boinc     15095 Jul 29 17:11 start_atlas.sh
[2025-07-30 01:43:58] drwxrwx--x 2 boinc boinc      4096 Jul 29 17:11 shared
[2025-07-30 01:43:58] -rw-r--r-- 2 boinc boinc    542892 Jul 29 17:11 input.tar.gz
[2025-07-30 01:43:58] -rw-r--r-- 1 boinc boinc         0 Jul 29 17:11 boinc_lockfile
[2025-07-30 01:43:58] -rw-r--r-- 1 boinc boinc      2584 Jul 29 21:08 pandaJob.out
[2025-07-30 01:43:58] -rw------- 1 boinc boinc    977324 Jul 29 21:08 agis_schedconf.cvmfs.json
[2025-07-30 01:43:58] -rw-r--r-- 1 boinc boinc      6643 Jul 29 23:13 init_data.xml
[2025-07-30 01:43:58] -rw------- 1 boinc boinc 161805986 Jul 30 01:42 HITS.45759215._000107.pool.root.1
[2025-07-30 01:43:58] -rw-r--r-- 1 boinc boinc       531 Jul 30 01:42 boinc_task_state.xml
[2025-07-30 01:43:58] -rw------- 1 boinc boinc      1035 Jul 30 01:43 memory_monitor_summary.json
[2025-07-30 01:43:58] -rw------- 1 boinc boinc   1589827 Jul 30 01:43 agis_ddmendpoints.agis.ALL.json
[2025-07-30 01:43:58] -rw------- 1 boinc boinc    354810 Jul 30 01:43 log.45759215._000107.job.log.tgz.1
[2025-07-30 01:43:58] -rw------- 1 boinc boinc      7816 Jul 30 01:43 heartbeat.json
[2025-07-30 01:43:58] -rw-r--r-- 1 boinc boinc      8192 Jul 30 01:43 boinc_mmap_file
[2025-07-30 01:43:58] -rw-r--r-- 1 boinc boinc        29 Jul 30 01:43 wrapper_checkpoint.txt
[2025-07-30 01:43:58] -rw------- 1 boinc boinc        97 Jul 30 01:43 pilot_heartbeat.json
[2025-07-30 01:43:58] -rw------- 1 boinc boinc       893 Jul 30 01:43 pilotlog.txt
[2025-07-30 01:43:58] -rw------- 1 boinc boinc   1541769 Jul 30 01:43 log.45759215._000107.job.log.1
[2025-07-30 01:43:58] -rw------- 1 boinc boinc       357 Jul 30 01:43 output.list
[2025-07-30 01:43:58] -rw-r--r-- 1 boinc boinc       620 Jul 30 01:43 runtime_log
[2025-07-30 01:43:58] -rw------- 1 boinc boinc   1914880 Jul 30 01:43 result.tar.gz
[2025-07-30 01:43:58] -rw-r--r-- 1 boinc boinc      9104 Jul 30 01:43 runtime_log.err
[2025-07-30 01:43:58] -rw------- 1 boinc boinc       789 Jul 30 01:43 Ae3LDmrK7z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUr1KDm2ZHsfm.diag
[2025-07-30 01:43:58] -rw-r--r-- 1 boinc boinc     22619 Jul 30 01:43 stderr.txt
[2025-07-30 01:43:58] HITS file was successfully produced:
[2025-07-30 01:43:58] -rw------- 1 boinc boinc 161805986 Jul 30 01:42 shared/HITS.pool.root.1
[2025-07-30 01:43:58]  *** Contents of shared directory: ***
[2025-07-30 01:43:58] total 371644
[2025-07-30 01:43:58] -rw-r--r-- 3 boinc boinc 216268291 Jul 29 17:11 ATLAS.root_0
[2025-07-30 01:43:58] -rw-r--r-- 2 boinc boinc     15095 Jul 29 17:11 start_atlas.sh
[2025-07-30 01:43:58] -rw-r--r-- 2 boinc boinc    542892 Jul 29 17:11 input.tar.gz
[2025-07-30 01:43:58] -rw------- 1 boinc boinc 161805986 Jul 30 01:42 HITS.pool.root.1
[2025-07-30 01:43:58] -rw------- 1 boinc boinc   1914880 Jul 30 01:43 result.tar.gz
01:44:00 (1519466): run_atlas exited; CPU time 64752.334211
01:44:00 (1519466): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN