Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:32:19 (2796321): wrapper (7.7.26015): starting
22:32:19 (2796321): wrapper: running run_atlas (--nthreads 3)
[2025-07-27 22:32:19] Arguments: --nthreads 3
[2025-07-27 22:32:19] Threads: 3
[2025-07-27 22:32:19] Checking for CVMFS
[2025-07-27 22:32:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:32:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:32:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:32:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:32:19] 2.9.2.0 353539 5079 66132 148823 1 56 36627142 36864001 0 130560 0 3294776 99.989 186736 2593 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 22:32:19] CVMFS is ok
[2025-07-27 22:32:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:32:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:32:19] Further information can be found at the LHC@home message board.
[2025-07-27 22:32:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:32:19] Checking for apptainer binary...
[2025-07-27 22:32:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:32:19] Running /usr/bin/apptainer --version
[2025-07-27 22:32:19] apptainer version 1.3.6-4.1
[2025-07-27 22:32:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:32:19] atlasA219a
[2025-07-27 22:32:19] apptainer works
[2025-07-27 22:32:19] Set ATHENA_PROC_NUMBER=3
[2025-07-27 22:32:19] Set ATHENA_CORE_NUMBER=3
[2025-07-27 22:32:19] Starting ATLAS job with PandaID=6745982412
[2025-07-27 22:32:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:36:44]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:36:44] 2025-07-27 22:36:09,083 | INFO     | executing command: lscpu
[2025-07-28 00:36:44] 2025-07-27 22:36:09,097 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 00:36:44] 2025-07-27 22:36:11,296 | INFO     | monitor loop #569: job 0:6745982412 is in state 'finished'
[2025-07-28 00:36:44] 2025-07-27 22:36:11,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:36:44] 2025-07-27 22:36:11,402 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 00:36:44] 2025-07-27 22:36:11,404 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4299.634416666667
[2025-07-28 00:36:44] 2025-07-27 22:36:11,406 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745982412/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:36:44] 2025-07-27 22:36:11,406 | INFO     | extracted standard info from prmon json
[2025-07-28 00:36:44] 2025-07-27 22:36:11,407 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:36:44] 2025-07-27 22:36:11,407 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:36:44] 2025-07-27 22:36:11,407 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:36:44] 2025-07-27 22:36:11,407 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:36:44] 2025-07-27 22:36:11,409 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:36:44] 2025-07-27 22:36:11,410 | INFO     | sum of square deviations: 563026370.5
[2025-07-28 00:36:44] 2025-07-27 22:36:11,410 | INFO     | sum of deviations: -18325492266.0
[2025-07-28 00:36:44] 2025-07-27 22:36:11,410 | INFO     | mean x: 1753652055.5
[2025-07-28 00:36:44] 2025-07-27 22:36:11,410 | INFO     | mean y: 2437234.1147540985
[2025-07-28 00:36:44] 2025-07-27 22:36:11,410 | INFO     | -- intersect: 57080646824.51307
[2025-07-28 00:36:44] 2025-07-27 22:36:11,411 | INFO     | intersect: 57080646824.51307
[2025-07-28 00:36:44] 2025-07-27 22:36:11,411 | INFO     | chi2: 1.7706757448913748
[2025-07-28 00:36:44] 2025-07-27 22:36:11,411 | INFO     | sum of square deviations: 496597218.0
[2025-07-28 00:36:44] 2025-07-27 22:36:11,412 | INFO     | sum of deviations: -17204198561.99999
[2025-07-28 00:36:44] 2025-07-27 22:36:11,412 | INFO     | mean x: 1753651903.0
[2025-07-28 00:36:44] 2025-07-27 22:36:11,412 | INFO     | mean y: 2439840.8547008545
[2025-07-28 00:36:44] 2025-07-27 22:36:11,412 | INFO     | -- intersect: 60756254913.25638
[2025-07-28 00:36:44] 2025-07-27 22:36:11,412 | INFO     | intersect: 60756254913.25638
[2025-07-28 00:36:44] 2025-07-27 22:36:11,412 | INFO     | chi2: 1.7591848481696362
[2025-07-28 00:36:44] 2025-07-27 22:36:11,412 | INFO     | current chi2=1.7591848481696362 (change=0.648955448499893 %)
[2025-07-28 00:36:44] 2025-07-27 22:36:11,412 | INFO     | right removable region: 116
[2025-07-28 00:36:44] 2025-07-27 22:36:11,413 | INFO     | sum of square deviations: 496597218.0
[2025-07-28 00:36:44] 2025-07-27 22:36:11,413 | INFO     | sum of deviations: -34427191407.0
[2025-07-28 00:36:44] 2025-07-27 22:36:11,413 | INFO     | mean x: 1753652208.0
[2025-07-28 00:36:44] 2025-07-27 22:36:11,413 | INFO     | mean y: 2473323.658119658
[2025-07-28 00:36:44] 2025-07-27 22:36:11,413 | INFO     | -- intersect: 121576493551.30302
[2025-07-28 00:36:44] 2025-07-27 22:36:11,413 | INFO     | intersect: 121576493551.30302
[2025-07-28 00:36:44] 2025-07-27 22:36:11,414 | INFO     | chi2: 0.24078051895693123
[2025-07-28 00:36:44] 2025-07-27 22:36:11,414 | INFO     | current chi2=0.24078051895693123 (change=86.40177233739075 %)
[2025-07-28 00:36:44] 2025-07-27 22:36:11,414 | INFO     | sum of square deviations: 435610028.0
[2025-07-28 00:36:44] 2025-07-27 22:36:11,414 | INFO     | sum of deviations: -29965459043.5
[2025-07-28 00:36:44] 2025-07-27 22:36:11,415 | INFO     | mean x: 1753652360.5
[2025-07-28 00:36:44] 2025-07-27 22:36:11,415 | INFO     | mean y: 2462152.5625
[2025-07-28 00:36:44] 2025-07-27 22:36:11,415 | INFO     | -- intersect: 120635584916.89851
[2025-07-28 00:36:44] 2025-07-27 22:36:11,415 | INFO     | intersect: 120635584916.89851
[2025-07-28 00:36:44] 2025-07-27 22:36:11,415 | INFO     | chi2: 0.2403751904428583
[2025-07-28 00:36:44] 2025-07-27 22:36:11,415 | INFO     | current chi2=0.2403751904428583 (change=0.1683394137652121 %)
[2025-07-28 00:36:44] 2025-07-27 22:36:11,415 | INFO     | left removable region: 20
[2025-07-28 00:36:44] 2025-07-27 22:36:11,415 | INFO     | sum of square deviations: 274312120.0
[2025-07-28 00:36:44] 2025-07-27 22:36:11,416 | INFO     | sum of deviations: -19212849201.0
[2025-07-28 00:36:44] 2025-07-27 22:36:11,416 | INFO     | mean x: 1753652482.5
[2025-07-28 00:36:44] 2025-07-27 22:36:11,416 | INFO     | mean y: 2438419.25
[2025-07-28 00:36:44] 2025-07-27 22:36:11,416 | INFO     | -- intersect: 122828439316.4462
[2025-07-28 00:36:44] 2025-07-27 22:36:11,416 | INFO     | intersect: 122828439316.4462
[2025-07-28 00:36:44] 2025-07-27 22:36:11,416 | INFO     | chi2: 0.20901468855505564
[2025-07-28 00:36:44] 2025-07-27 22:36:11,416 | INFO     | -- intersect: 122828439316.4462
[2025-07-28 00:36:44] 2025-07-27 22:36:11,416 | INFO     | current memory leak: -70.04 B/s (using 96 data points, chi2=0.21)
[2025-07-28 00:36:44] 2025-07-27 22:36:11,417 | INFO     | could have reported an average CPU frequency of 4299 MHz (8 samples)
[2025-07-28 00:36:44] 2025-07-27 22:36:11,417 | INFO     | ..............................
[2025-07-28 00:36:44] 2025-07-27 22:36:11,417 | INFO     | . Timing measurements:
[2025-07-28 00:36:44] 2025-07-27 22:36:11,417 | INFO     | . get job = 0 s
[2025-07-28 00:36:44] 2025-07-27 22:36:11,417 | INFO     | . initial setup = 1 s
[2025-07-28 00:36:44] 2025-07-27 22:36:11,417 | INFO     | . payload setup = 3 s
[2025-07-28 00:36:44] 2025-07-27 22:36:11,417 | INFO     | . stage-in = 0 s
[2025-07-28 00:36:44] 2025-07-27 22:36:11,417 | INFO     | . payload execution = 7399 s
[2025-07-28 00:36:44] 2025-07-27 22:36:11,417 | INFO     | . stage-out = 0 s
[2025-07-28 00:36:44] 2025-07-27 22:36:11,417 | INFO     | . log creation = 0 s
[2025-07-28 00:36:44] 2025-07-27 22:36:11,417 | INFO     | ..............................
[2025-07-28 00:36:44] 2025-07-27 22:36:11,457 | INFO     | 
[2025-07-28 00:36:44] 2025-07-27 22:36:11,457 | INFO     | job summary report
[2025-07-28 00:36:44] 2025-07-27 22:36:11,457 | INFO     | --------------------------------------------------
[2025-07-28 00:36:44] 2025-07-27 22:36:11,457 | INFO     | PanDA job id: 6745982412
[2025-07-28 00:36:44] 2025-07-27 22:36:11,457 | INFO     | task id: 45758367
[2025-07-28 00:36:44] 2025-07-27 22:36:11,457 | INFO     | errors: (none)
[2025-07-28 00:36:44] 2025-07-27 22:36:11,457 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:36:44] 2025-07-27 22:36:11,457 | INFO     | pilot state: finished 
[2025-07-28 00:36:44] 2025-07-27 22:36:11,457 | INFO     | transexitcode: 0
[2025-07-28 00:36:44] 2025-07-27 22:36:11,457 | INFO     | exeerrorcode: 0
[2025-07-28 00:36:44] 2025-07-27 22:36:11,457 | INFO     | exeerrordiag: 
[2025-07-28 00:36:44] 2025-07-27 22:36:11,458 | INFO     | exitcode: 0
[2025-07-28 00:36:44] 2025-07-27 22:36:11,458 | INFO     | exitmsg: OK
[2025-07-28 00:36:44] 2025-07-27 22:36:11,458 | INFO     | cpuconsumptiontime: 21462 s
[2025-07-28 00:36:44] 2025-07-27 22:36:11,458 | INFO     | nevents: 400
[2025-07-28 00:36:44] 2025-07-27 22:36:11,458 | INFO     | neventsw: 0
[2025-07-28 00:36:44] 2025-07-27 22:36:11,458 | INFO     | pid: 2806559
[2025-07-28 00:36:44] 2025-07-27 22:36:11,458 | INFO     | pgrp: 2806559
[2025-07-28 00:36:44] 2025-07-27 22:36:11,458 | INFO     | corecount: 3
[2025-07-28 00:36:44] 2025-07-27 22:36:11,458 | INFO     | event service: False
[2025-07-28 00:36:44] 2025-07-27 22:36:11,458 | INFO     | sizes: {0: 2397477, 2: 2397739, 11: 2397767, 7406: 2434420, 7409: 2434420, 7413: 2434614}
[2025-07-28 00:36:44] 2025-07-27 22:36:11,458 | INFO     | --------------------------------------------------
[2025-07-28 00:36:44] 2025-07-27 22:36:11,458 | INFO     | 
[2025-07-28 00:36:44] 2025-07-27 22:36:11,458 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 00:36:44] 2025-07-27 22:36:11,472 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,472 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,472 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,472 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,472 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,472 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,472 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,472 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,473 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:36:44] 2025-07-27 22:36:11,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,473 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:36:44] 2025-07-27 22:36:11,473 | INFO     | job 6745982412 has completed (purged errors)
[2025-07-28 00:36:44] 2025-07-27 22:36:11,473 | INFO     | overall cleanup function is called
[2025-07-28 00:36:44] 2025-07-27 22:36:12,480 | INFO     | --- collectZombieJob: --- 10, [2806559]
[2025-07-28 00:36:44] 2025-07-27 22:36:12,480 | INFO     | zombie collector waiting for pid 2806559
[2025-07-28 00:36:44] 2025-07-27 22:36:12,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:36:44] 2025-07-27 22:36:12,480 | INFO     | collected zombie processes
[2025-07-28 00:36:44] 2025-07-27 22:36:12,480 | INFO     | will attempt to kill all subprocesses of pid=2806559
[2025-07-28 00:36:44] 2025-07-27 22:36:12,538 | INFO     | process IDs to be killed: [2806559] (in reverse order)
[2025-07-28 00:36:44] 2025-07-27 22:36:12,564 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:36:44] 2025-07-27 22:36:12,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:36:44] 2025-07-27 22:36:12,566 | INFO     | did not find any defunct processes belonging to 2806559
[2025-07-28 00:36:44] 2025-07-27 22:36:12,567 | INFO     | did not find any defunct processes belonging to 2806559
[2025-07-28 00:36:44] 2025-07-27 22:36:12,567 | INFO     | ready for new job
[2025-07-28 00:36:44] 2025-07-27 22:36:12,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:36:44] 2025-07-27 22:36:12,568 | INFO     | ***************************************
[2025-07-28 00:36:44] 2025-07-27 22:36:12,568 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:36:44] 2025-07-27 22:36:12,568 | INFO     | ***************************************
[2025-07-28 00:36:44] 2025-07-27 22:36:12,568 | INFO     | 
[2025-07-28 00:36:44] 2025-07-27 22:36:12,568 | INFO     | architecture information:
[2025-07-28 00:36:44] 2025-07-27 22:36:12,568 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:36:44] 2025-07-27 22:36:12,579 | INFO     | cat /etc/os-release:
[2025-07-28 00:36:44] NAME="CentOS Linux"
[2025-07-28 00:36:44] VERSION="7 (Core)"
[2025-07-28 00:36:44] ID="centos"
[2025-07-28 00:36:44] ID_LIKE="rhel fedora"
[2025-07-28 00:36:44] VERSION_ID="7"
[2025-07-28 00:36:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:36:44] ANSI_COLOR="0;31"
[2025-07-28 00:36:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:36:44] HOME_URL="https://www.centos.org/"
[2025-07-28 00:36:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:36:44] 
[2025-07-28 00:36:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:36:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:36:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:36:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:36:44] 
[2025-07-28 00:36:44] 2025-07-27 22:36:12,579 | INFO     | ***************************************
[2025-07-28 00:36:44] 2025-07-27 22:36:13,082 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 00:36:44] 2025-07-27 22:36:13,093 | INFO     | sufficient remaining disk space (820434173952 B)
[2025-07-28 00:36:44] 2025-07-27 22:36:13,093 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:36:44] 2025-07-27 22:36:13,093 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:36:44] 2025-07-27 22:36:13,093 | INFO     | update_server=False
[2025-07-28 00:36:44] 2025-07-27 22:36:13,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:36:44] 2025-07-27 22:36:13,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:36:44] 2025-07-27 22:36:13,093 | INFO     | aborting loop
[2025-07-28 00:36:44] 2025-07-27 22:36:13,093 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:36:44] 2025-07-27 22:36:13,093 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:36:44] 2025-07-27 22:36:13,244 | INFO     | all data control threads have been joined
[2025-07-28 00:36:44] 2025-07-27 22:36:13,514 | INFO     | all job control threads have been joined
[2025-07-28 00:36:44] 2025-07-27 22:36:13,916 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:36:44] 2025-07-27 22:36:14,098 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:14,099 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:14,099 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:14,243 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:14,249 | INFO     | [data] control thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:14,502 | INFO     | all payload control threads have been joined
[2025-07-28 00:36:44] 2025-07-27 22:36:14,519 | INFO     | [job] control thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:14,538 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:14,557 | INFO     | [job] validate thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:14,782 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:14,822 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:15,099 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:15,172 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:15,498 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:15,508 | INFO     | [payload] control thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:17,921 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:23,503 | INFO     | job.realtimelogging is not enabled
[2025-07-28 00:36:44] 2025-07-27 22:36:24,508 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:36:44] 2025-07-27 22:36:24,953 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971478165312)>', '<ExcThread(monitor, started 139970761189120)>']
[2025-07-28 00:36:44] 2025-07-27 22:36:29,954 | INFO     | all workflow threads have been joined
[2025-07-28 00:36:44] 2025-07-27 22:36:29,954 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:36:44] 2025-07-27 22:36:29,954 | INFO     | traces error code: 0
[2025-07-28 00:36:44] 2025-07-27 22:36:29,954 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:36:44] 2025-07-27 22:36:44,123 | INFO     | PID=2799991 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:36:44] 2025-07-27 22:36:44,123 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:36:44] 2025-07-27 22:36:44,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:36:44] 2025-07-27 22:36:44,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:36:44] 2025-07-27 22:36:44,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:36:44] 2025-07-27 22:36:44,123 | INFO     | [monitor] control thread has ended
[2025-07-28 00:36:44] 2025-07-27 22:36:44,171 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:36:44] 2025-07-27 22:36:44,174 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:36:44] 2025-07-27 22:36:44,177 [wrapper] pilotpid: 2799991
[2025-07-28 00:36:44] 2025-07-27 22:36:44,180 [wrapper] Pilot exit status: 0
[2025-07-28 00:36:44] 2025-07-27 22:36:44,187 [wrapper] pandaids: 6745982412
[2025-07-28 00:36:44] 2025-07-27 22:36:44,203 [wrapper] cleanup supervisor_pilot 2849530 2799992
[2025-07-28 00:36:44] 2025-07-27 22:36:44,206 [wrapper] Test setup, not cleaning
[2025-07-28 00:36:44] 2025-07-27 22:36:44,209 [wrapper] apfmon messages muted
[2025-07-28 00:36:44] 2025-07-27 22:36:44,211 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:36:44] 2025-07-27 22:36:44,213 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:36:44]  *** Error codes and diagnostics ***
[2025-07-28 00:36:44]     "exeErrorCode": 0,
[2025-07-28 00:36:44]     "exeErrorDiag": "",
[2025-07-28 00:36:44]     "pilotErrorCode": 0,
[2025-07-28 00:36:44]     "pilotErrorDiag": "",
[2025-07-28 00:36:44]  *** Listing of results directory ***
[2025-07-28 00:36:44] total 415864
[2025-07-28 00:36:44] -rw-r--r-- 1 boinc boinc    530466 Jul 27 05:36 pilot3.tar.gz
[2025-07-28 00:36:44] -rw-r--r-- 1 boinc boinc      5112 Jul 27 05:39 queuedata.json
[2025-07-28 00:36:44] -rwx------ 1 boinc boinc     36292 Jul 27 05:39 runpilot2-wrapper.sh
[2025-07-28 00:36:44] -rw-r--r-- 1 boinc boinc       100 Jul 27 22:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:36:44] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 22:32 run_atlas
[2025-07-28 00:36:44] -rw-r--r-- 1 boinc boinc       105 Jul 27 22:32 job.xml
[2025-07-28 00:36:44] -rw-r--r-- 2 boinc boinc 244113064 Jul 27 22:32 EVNT.45758364._000001.pool.root.1
[2025-07-28 00:36:44] -rw-r--r-- 1 boinc boinc      6681 Jul 27 22:32 init_data.xml
[2025-07-28 00:36:44] drwxrwx--x 2 boinc boinc      4096 Jul 27 22:32 shared
[2025-07-28 00:36:44] -rw-r--r-- 2 boinc boinc    542886 Jul 27 22:32 input.tar.gz
[2025-07-28 00:36:44] -rw-r--r-- 2 boinc boinc     15095 Jul 27 22:32 start_atlas.sh
[2025-07-28 00:36:44] -rw-r--r-- 1 boinc boinc         0 Jul 27 22:32 boinc_lockfile
[2025-07-28 00:36:44] -rw-r--r-- 1 boinc boinc      2568 Jul 27 22:32 pandaJob.out
[2025-07-28 00:36:44] -rw------- 1 boinc boinc    980109 Jul 27 22:32 agis_schedconf.cvmfs.json
[2025-07-28 00:36:44] -rw------- 1 boinc boinc   1593052 Jul 27 22:32 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:36:44] drwx------ 4 boinc boinc      4096 Jul 27 22:32 pilot3
[2025-07-28 00:36:44] -rw------- 1 boinc boinc 175949353 Jul 28 00:35 HITS.45758367._000010.pool.root.1
[2025-07-28 00:36:44] -rw-r--r-- 1 boinc boinc       529 Jul 28 00:35 boinc_task_state.xml
[2025-07-28 00:36:44] -rw------- 1 boinc boinc      1019 Jul 28 00:36 memory_monitor_summary.json
[2025-07-28 00:36:44] -rw------- 1 boinc boinc        95 Jul 28 00:36 pilot_heartbeat.json
[2025-07-28 00:36:44] -rw------- 1 boinc boinc    249767 Jul 28 00:36 log.45758367._000010.job.log.tgz.1
[2025-07-28 00:36:44] -rw------- 1 boinc boinc      7751 Jul 28 00:36 heartbeat.json
[2025-07-28 00:36:44] -rw-r--r-- 1 boinc boinc        27 Jul 28 00:36 wrapper_checkpoint.txt
[2025-07-28 00:36:44] -rw-r--r-- 1 boinc boinc      8192 Jul 28 00:36 boinc_mmap_file
[2025-07-28 00:36:44] -rw------- 1 boinc boinc       747 Jul 28 00:36 pilotlog.txt
[2025-07-28 00:36:44] -rw------- 1 boinc boinc    703691 Jul 28 00:36 log.45758367._000010.job.log.1
[2025-07-28 00:36:44] -rw------- 1 boinc boinc       357 Jul 28 00:36 output.list
[2025-07-28 00:36:44] -rw-r--r-- 1 boinc boinc       620 Jul 28 00:36 runtime_log
[2025-07-28 00:36:44] -rw------- 1 boinc boinc    972800 Jul 28 00:36 result.tar.gz
[2025-07-28 00:36:44] -rw------- 1 boinc boinc       663 Jul 28 00:36 wsfLDmoP7z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKs1KDmdGqUzm.diag
[2025-07-28 00:36:44] -rw-r--r-- 1 boinc boinc      8754 Jul 28 00:36 runtime_log.err
[2025-07-28 00:36:44] -rw-r--r-- 1 boinc boinc     21150 Jul 28 00:36 stderr.txt
[2025-07-28 00:36:44] HITS file was successfully produced:
[2025-07-28 00:36:44] -rw------- 1 boinc boinc 175949353 Jul 28 00:35 shared/HITS.pool.root.1
[2025-07-28 00:36:44]  *** Contents of shared directory: ***
[2025-07-28 00:36:44] total 411728
[2025-07-28 00:36:44] -rw-r--r-- 2 boinc boinc 244113064 Jul 27 22:32 ATLAS.root_0
[2025-07-28 00:36:44] -rw-r--r-- 2 boinc boinc    542886 Jul 27 22:32 input.tar.gz
[2025-07-28 00:36:44] -rw-r--r-- 2 boinc boinc     15095 Jul 27 22:32 start_atlas.sh
[2025-07-28 00:36:44] -rw------- 1 boinc boinc 175949353 Jul 28 00:35 HITS.pool.root.1
[2025-07-28 00:36:44] -rw------- 1 boinc boinc    972800 Jul 28 00:36 result.tar.gz
00:36:46 (2796321): run_atlas exited; CPU time 21500.517673
00:36:46 (2796321): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN