Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:57:03 (1124804): wrapper (7.7.26015): starting
00:57:03 (1124804): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 00:57:03] Arguments: --nthreads 12
[2025-07-28 00:57:03] Threads: 12
[2025-07-28 00:57:03] Checking for CVMFS
[2025-07-28 00:57:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 00:57:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 00:57:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 00:57:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 00:57:03] 2.13.1.0 1072336 8591 82496 148827 1 57 2209641 4097025 0 130560 0 10578812 99.988 315553 7482 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-28 00:57:03] CVMFS is ok
[2025-07-28 00:57:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 00:57:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 00:57:03] Further information can be found at the LHC@home message board.
[2025-07-28 00:57:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 00:57:03] Checking for apptainer binary...
[2025-07-28 00:57:03] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-28 00:57:03] apptainer is not installed, using version from CVMFS
[2025-07-28 00:57:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 00:57:03] pckelar2.cern.ch
[2025-07-28 00:57:03] apptainer works
[2025-07-28 00:57:03] Set ATHENA_PROC_NUMBER=12
[2025-07-28 00:57:03] Set ATHENA_CORE_NUMBER=12
[2025-07-28 00:57:03] Starting ATLAS job with PandaID=6745973755
[2025-07-28 00:57:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:55:39]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:55:39]  lfn=log.45759839._000008.job.log.tgz.1
[2025-07-28 01:55:39]  mtime=0
[2025-07-28 01:55:39]  protocol_id=None
[2025-07-28 01:55:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 01:55:39]  replicas=None
[2025-07-28 01:55:39]  scope=mc23_13p6TeV
[2025-07-28 01:55:39]  status=None
[2025-07-28 01:55:39]  status_code=0
[2025-07-28 01:55:39]  storage_token=
[2025-07-28 01:55:39]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6745973755/log.45759839._000008.job.log.tgz.1
[2025-07-28 01:55:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/3f/log.45759839._000008.job.log.tgz.1
[2025-07-28 01:55:39]  workdir=None
[2025-07-28 01:55:39] ]
[2025-07-28 01:55:39] 2025-07-27 23:54:55,950 | INFO     | transferring file log.45759839._000008.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6745973755/log.45759839._000008.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 01:55:39] 2025-07-27 23:54:55,950 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6745973755/log.45759839._000008.job.log.tgz.1 /var/lib/boinc/slots/0/log.45759839._000008.job
[2025-07-28 01:55:39] 2025-07-27 23:54:55,961 | INFO     | adding to output.list: log.45759839._000008.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/3f/log.45759839._000008.job.log.tg
[2025-07-28 01:55:39] 2025-07-27 23:54:55,962 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 01:55:39] 2025-07-27 23:54:55,962 | INFO     | summary of transferred files:
[2025-07-28 01:55:39] 2025-07-27 23:54:55,962 | INFO     |  -- lfn=log.45759839._000008.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 01:55:39] 2025-07-27 23:54:55,962 | INFO     | stage-out finished correctly
[2025-07-28 01:55:39] 2025-07-27 23:54:56,006 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 01:55:39] 2025-07-27 23:54:57,395 | INFO     | monitor loop #268: job 0:6745973755 is in state 'finished'
[2025-07-28 01:55:39] 2025-07-27 23:54:57,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:55:39] 2025-07-27 23:54:57,489 | INFO     | job 6745973755 has state=finished
[2025-07-28 01:55:39] 2025-07-27 23:54:57,490 | INFO     | preparing for final server update for job 6745973755 in state='finished'
[2025-07-28 01:55:39] 2025-07-27 23:54:57,490 | INFO     | this job has now completed (state=finished)
[2025-07-28 01:55:39] 2025-07-27 23:54:57,490 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 01:55:39] 2025-07-27 23:54:57,490 | INFO     | log transfer has been attempted: DONE
[2025-07-28 01:55:39] 2025-07-27 23:54:57,490 | INFO     | job 6745973755 has finished - writing final server update
[2025-07-28 01:55:39] 2025-07-27 23:54:57,491 | INFO     | total number of processed events: 400 (read)
[2025-07-28 01:55:39] 2025-07-27 23:54:57,491 | INFO     | executing command: lscpu
[2025-07-28 01:55:39] 2025-07-27 23:54:57,513 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 01:55:39] 2025-07-27 23:54:59,897 | INFO     | monitor loop #269: job 0:6745973755 is in state 'finished'
[2025-07-28 01:55:39] 2025-07-27 23:54:59,898 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:55:39] 2025-07-27 23:55:02,401 | INFO     | monitor loop #270: job 0:6745973755 is in state 'finished'
[2025-07-28 01:55:39] 2025-07-27 23:55:02,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:55:39] 2025-07-27 23:55:04,904 | INFO     | monitor loop #271: job 0:6745973755 is in state 'finished'
[2025-07-28 01:55:39] 2025-07-27 23:55:04,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 01:55:39] 2025-07-27 23:55:06,794 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 01:55:39] 2025-07-27 23:55:06,796 | INFO     | found 20 cores (10 cores per socket, 2 sockets) , CPU MHz: 2526.3913999999995
[2025-07-28 01:55:39] 2025-07-27 23:55:06,799 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745973755/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 01:55:39] 2025-07-27 23:55:06,799 | INFO     | extracted standard info from prmon json
[2025-07-28 01:55:39] 2025-07-27 23:55:06,799 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 01:55:39] 2025-07-27 23:55:06,799 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 01:55:39] 2025-07-27 23:55:06,800 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:55:39] 2025-07-27 23:55:06,800 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:55:39] 2025-07-27 23:55:06,800 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:55:39] 2025-07-27 23:55:06,801 | INFO     | sum of square deviations: 38744912.5
[2025-07-28 01:55:39] 2025-07-27 23:55:06,801 | INFO     | sum of deviations: -5381459100.999999
[2025-07-28 01:55:39] 2025-07-27 23:55:06,801 | INFO     | mean x: 1753658852.5
[2025-07-28 01:55:39] 2025-07-27 23:55:06,801 | INFO     | mean y: 2844040.44
[2025-07-28 01:55:39] 2025-07-27 23:55:06,801 | INFO     | -- intersect: 243576587866.4285
[2025-07-28 01:55:39] 2025-07-27 23:55:06,801 | INFO     | intersect: 243576587866.4285
[2025-07-28 01:55:39] 2025-07-27 23:55:06,801 | INFO     | chi2: 0.08876724069574374
[2025-07-28 01:55:39] 2025-07-27 23:55:06,801 | INFO     | -- intersect: 243576587866.4285
[2025-07-28 01:55:39] 2025-07-27 23:55:06,801 | INFO     | current memory leak: -138.89 B/s (using 50 data points, chi2=0.09)
[2025-07-28 01:55:39] 2025-07-27 23:55:06,801 | INFO     | could have reported an average CPU frequency of 2586 MHz (5 samples)
[2025-07-28 01:55:39] 2025-07-27 23:55:06,802 | INFO     | ..............................
[2025-07-28 01:55:39] 2025-07-27 23:55:06,802 | INFO     | . Timing measurements:
[2025-07-28 01:55:39] 2025-07-27 23:55:06,802 | INFO     | . get job = 0 s
[2025-07-28 01:55:39] 2025-07-27 23:55:06,802 | INFO     | . initial setup = 1 s
[2025-07-28 01:55:39] 2025-07-27 23:55:06,802 | INFO     | . payload setup = 5 s
[2025-07-28 01:55:39] 2025-07-27 23:55:06,802 | INFO     | . stage-in = 0 s
[2025-07-28 01:55:39] 2025-07-27 23:55:06,802 | INFO     | . payload execution = 3440 s
[2025-07-28 01:55:39] 2025-07-27 23:55:06,802 | INFO     | . stage-out = 0 s
[2025-07-28 01:55:39] 2025-07-27 23:55:06,802 | INFO     | . log creation = 0 s
[2025-07-28 01:55:39] 2025-07-27 23:55:06,802 | INFO     | ..............................
[2025-07-28 01:55:39] 2025-07-27 23:55:06,850 | INFO     | 
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | job summary report
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | --------------------------------------------------
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | PanDA job id: 6745973755
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | task id: 45759839
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | errors: (none)
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | pilot state: finished 
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | transexitcode: 0
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | exeerrorcode: 0
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | exeerrordiag: 
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | exitcode: 0
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | exitmsg: OK
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | cpuconsumptiontime: 37562 s
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | nevents: 400
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | neventsw: 0
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | pid: 1135814
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | pgrp: 1135814
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | corecount: 12
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | event service: False
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | sizes: {0: 2396641, 1: 2397497, 4: 2397759, 11: 2397787, 3450: 2423471, 3452: 2432653, 3463: 2432823}
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | --------------------------------------------------
[2025-07-28 01:55:39] 2025-07-27 23:55:06,851 | INFO     | 
[2025-07-28 01:55:39] 2025-07-27 23:55:06,852 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 01:55:39] 2025-07-27 23:55:06,865 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,867 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:55:39] 2025-07-27 23:55:06,867 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,867 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:55:39] 2025-07-27 23:55:06,867 | INFO     | job 6745973755 has completed (purged errors)
[2025-07-28 01:55:39] 2025-07-27 23:55:06,867 | INFO     | overall cleanup function is called
[2025-07-28 01:55:39] 2025-07-27 23:55:07,873 | INFO     | --- collectZombieJob: --- 10, [1135814]
[2025-07-28 01:55:39] 2025-07-27 23:55:07,873 | INFO     | zombie collector waiting for pid 1135814
[2025-07-28 01:55:39] 2025-07-27 23:55:07,874 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:55:39] 2025-07-27 23:55:07,874 | INFO     | collected zombie processes
[2025-07-28 01:55:39] 2025-07-27 23:55:07,874 | INFO     | will attempt to kill all subprocesses of pid=1135814
[2025-07-28 01:55:39] 2025-07-27 23:55:07,950 | INFO     | process IDs to be killed: [1135814] (in reverse order)
[2025-07-28 01:55:39] 2025-07-27 23:55:07,980 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:55:39] 2025-07-27 23:55:07,980 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:55:39] 2025-07-27 23:55:07,982 | INFO     | did not find any defunct processes belonging to 1135814
[2025-07-28 01:55:39] 2025-07-27 23:55:07,983 | INFO     | did not find any defunct processes belonging to 1135814
[2025-07-28 01:55:39] 2025-07-27 23:55:07,983 | INFO     | ready for new job
[2025-07-28 01:55:39] 2025-07-27 23:55:07,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:55:39] 2025-07-27 23:55:07,985 | INFO     | ***************************************
[2025-07-28 01:55:39] 2025-07-27 23:55:07,985 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:55:39] 2025-07-27 23:55:07,985 | INFO     | ***************************************
[2025-07-28 01:55:39] 2025-07-27 23:55:07,985 | INFO     | 
[2025-07-28 01:55:39] 2025-07-27 23:55:07,986 | INFO     | architecture information:
[2025-07-28 01:55:39] 2025-07-27 23:55:07,986 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:55:39] 2025-07-27 23:55:07,993 | INFO     | cat /etc/os-release:
[2025-07-28 01:55:39] NAME="CentOS Linux"
[2025-07-28 01:55:39] VERSION="7 (Core)"
[2025-07-28 01:55:39] ID="centos"
[2025-07-28 01:55:39] ID_LIKE="rhel fedora"
[2025-07-28 01:55:39] VERSION_ID="7"
[2025-07-28 01:55:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:55:39] ANSI_COLOR="0;31"
[2025-07-28 01:55:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:55:39] HOME_URL="https://www.centos.org/"
[2025-07-28 01:55:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:55:39] 
[2025-07-28 01:55:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:55:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:55:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:55:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:55:39] 
[2025-07-28 01:55:39] 2025-07-27 23:55:07,994 | INFO     | ***************************************
[2025-07-28 01:55:39] 2025-07-27 23:55:08,497 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 01:55:39] 2025-07-27 23:55:08,508 | INFO     | sufficient remaining disk space (232794357760 B)
[2025-07-28 01:55:39] 2025-07-27 23:55:08,509 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:55:39] 2025-07-27 23:55:08,509 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:55:39] 2025-07-27 23:55:08,509 | INFO     | update_server=False
[2025-07-28 01:55:39] 2025-07-27 23:55:08,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:55:39] 2025-07-27 23:55:08,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:55:39] 2025-07-27 23:55:08,509 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:55:39] 2025-07-27 23:55:08,510 | INFO     | aborting loop
[2025-07-28 01:55:39] 2025-07-27 23:55:08,800 | INFO     | all payload control threads have been joined
[2025-07-28 01:55:39] 2025-07-27 23:55:08,951 | INFO     | all job control threads have been joined
[2025-07-28 01:55:39] 2025-07-27 23:55:09,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:55:39] 2025-07-27 23:55:09,509 | INFO     | all data control threads have been joined
[2025-07-28 01:55:39] 2025-07-27 23:55:09,514 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:09,515 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:09,515 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:09,805 | INFO     | [payload] control thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:09,830 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:09,942 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:09,955 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:09,957 | INFO     | [job] control thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:10,351 | INFO     | [job] validate thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:10,376 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:10,500 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:10,514 | INFO     | [data] control thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:10,672 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:10,728 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:11,028 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:11,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:55:39] 2025-07-27 23:55:15,068 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:55:39] 2025-07-27 23:55:15,911 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140474717505344)>', '<ExcThread(monitor, started 140474312533760)>']
[2025-07-28 01:55:39] 2025-07-27 23:55:20,936 | INFO     | all workflow threads have been joined
[2025-07-28 01:55:39] 2025-07-27 23:55:20,936 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:55:39] 2025-07-27 23:55:20,937 | INFO     | traces error code: 0
[2025-07-28 01:55:39] 2025-07-27 23:55:20,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:55:39] 2025-07-27 23:55:39,019 | INFO     | PID=1128565 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 01:55:39] 2025-07-27 23:55:39,020 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:55:39] 2025-07-27 23:55:39,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:55:39] 2025-07-27 23:55:39,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:55:39] 2025-07-27 23:55:39,020 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:55:39] 2025-07-27 23:55:39,020 | INFO     | [monitor] control thread has ended
[2025-07-28 01:55:39] 2025-07-27 23:55:39,087 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:55:39] 2025-07-27 23:55:39,089 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:55:39] 2025-07-27 23:55:39,091 [wrapper] pilotpid: 1128565
[2025-07-28 01:55:39] 2025-07-27 23:55:39,093 [wrapper] Pilot exit status: 0
[2025-07-28 01:55:39] 2025-07-27 23:55:39,101 [wrapper] pandaids: 6745973755
[2025-07-28 01:55:39] 2025-07-27 23:55:39,120 [wrapper] cleanup supervisor_pilot 1147905 1128566
[2025-07-28 01:55:39] 2025-07-27 23:55:39,122 [wrapper] Test setup, not cleaning
[2025-07-28 01:55:39] 2025-07-27 23:55:39,124 [wrapper] apfmon messages muted
[2025-07-28 01:55:39] 2025-07-27 23:55:39,126 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:55:39] 2025-07-27 23:55:39,128 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:55:39]  *** Error codes and diagnostics ***
[2025-07-28 01:55:39]     "exeErrorCode": 0,
[2025-07-28 01:55:39]     "exeErrorDiag": "",
[2025-07-28 01:55:39]     "pilotErrorCode": 0,
[2025-07-28 01:55:39]     "pilotErrorDiag": "",
[2025-07-28 01:55:39]  *** Listing of results directory ***
[2025-07-28 01:55:39] total 402732
[2025-07-28 01:55:39] -rw-r--r-- 1 boinc boinc    530466 Jul 27 05:31 pilot3.tar.gz
[2025-07-28 01:55:39] -rw-r--r-- 1 boinc boinc      5112 Jul 27 05:35 queuedata.json
[2025-07-28 01:55:39] -rwx------ 1 boinc boinc     36292 Jul 27 05:35 runpilot2-wrapper.sh
[2025-07-28 01:55:39] -rw-r--r-- 1 boinc boinc       100 Jul 28 00:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:55:39] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 00:57 run_atlas
[2025-07-28 01:55:39] -rw-r--r-- 1 boinc boinc       105 Jul 28 00:57 job.xml
[2025-07-28 01:55:39] drwxrwx--x 2 boinc boinc        68 Jul 28 00:57 shared
[2025-07-28 01:55:39] -rw-r--r-- 2 boinc boinc    542884 Jul 28 00:57 input.tar.gz
[2025-07-28 01:55:39] -rw-r--r-- 1 boinc boinc      6471 Jul 28 00:57 init_data.xml
[2025-07-28 01:55:39] -rw-r--r-- 2 boinc boinc 240559746 Jul 28 00:57 EVNT.45759835._000001.pool.root.1
[2025-07-28 01:55:39] -rw-r--r-- 2 boinc boinc     15095 Jul 28 00:57 start_atlas.sh
[2025-07-28 01:55:39] -rw-r--r-- 1 boinc boinc         0 Jul 28 00:57 boinc_lockfile
[2025-07-28 01:55:39] -rw-r--r-- 1 boinc boinc      2565 Jul 28 00:57 pandaJob.out
[2025-07-28 01:55:39] -rw------- 1 boinc boinc    980109 Jul 28 00:57 agis_schedconf.cvmfs.json
[2025-07-28 01:55:39] -rw------- 1 boinc boinc   1593052 Jul 28 00:57 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:55:39] drwx------ 4 boinc boinc      4096 Jul 28 00:57 pilot3
[2025-07-28 01:55:39] -rw------- 1 boinc boinc 166587211 Jul 28 01:54 HITS.45759839._000008.pool.root.1
[2025-07-28 01:55:39] -rw-r--r-- 1 boinc boinc       529 Jul 28 01:54 boinc_task_state.xml
[2025-07-28 01:55:39] -rw------- 1 boinc boinc      1016 Jul 28 01:54 memory_monitor_summary.json
[2025-07-28 01:55:39] -rw------- 1 boinc boinc    342919 Jul 28 01:54 log.45759839._000008.job.log.tgz.1
[2025-07-28 01:55:39] -rw------- 1 boinc boinc      7781 Jul 28 01:55 heartbeat.json
[2025-07-28 01:55:39] -rw-r--r-- 1 boinc boinc        27 Jul 28 01:55 wrapper_checkpoint.txt
[2025-07-28 01:55:39] -rw-r--r-- 1 boinc boinc      8192 Jul 28 01:55 boinc_mmap_file
[2025-07-28 01:55:39] -rw------- 1 boinc boinc        95 Jul 28 01:55 pilot_heartbeat.json
[2025-07-28 01:55:39] -rw------- 1 boinc boinc       747 Jul 28 01:55 pilotlog.txt
[2025-07-28 01:55:39] -rw------- 1 boinc boinc    350023 Jul 28 01:55 log.45759839._000008.job.log.1
[2025-07-28 01:55:39] -rw------- 1 boinc boinc       357 Jul 28 01:55 output.list
[2025-07-28 01:55:39] -rw-r--r-- 1 boinc boinc       620 Jul 28 01:55 runtime_log
[2025-07-28 01:55:39] -rw------- 1 boinc boinc    716800 Jul 28 01:55 result.tar.gz
[2025-07-28 01:55:39] -rw-r--r-- 1 boinc boinc      8684 Jul 28 01:55 runtime_log.err
[2025-07-28 01:55:39] -rw------- 1 boinc boinc       653 Jul 28 01:55 51uKDm5L7z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT6TLDmMHuIsm.diag
[2025-07-28 01:55:39] -rw-r--r-- 1 boinc boinc     21806 Jul 28 01:55 stderr.txt
[2025-07-28 01:55:39] HITS file was successfully produced:
[2025-07-28 01:55:39] -rw------- 1 boinc boinc 166587211 Jul 28 01:54 shared/HITS.pool.root.1
[2025-07-28 01:55:39]  *** Contents of shared directory: ***
[2025-07-28 01:55:39] total 398856
[2025-07-28 01:55:39] -rw-r--r-- 2 boinc boinc    542884 Jul 28 00:57 input.tar.gz
[2025-07-28 01:55:39] -rw-r--r-- 2 boinc boinc 240559746 Jul 28 00:57 ATLAS.root_0
[2025-07-28 01:55:39] -rw-r--r-- 2 boinc boinc     15095 Jul 28 00:57 start_atlas.sh
[2025-07-28 01:55:39] -rw------- 1 boinc boinc 166587211 Jul 28 01:54 HITS.pool.root.1
[2025-07-28 01:55:39] -rw------- 1 boinc boinc    716800 Jul 28 01:55 result.tar.gz
01:55:41 (1124804): run_atlas exited; CPU time 37581.381604
01:55:41 (1124804): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN