Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:47:30 (1484864): wrapper (7.7.26015): starting
20:47:30 (1484864): wrapper: running run_atlas (--nthreads 3)
[2025-07-27 20:47:30] Arguments: --nthreads 3
[2025-07-27 20:47:30] Threads: 3
[2025-07-27 20:47:30] Checking for CVMFS
[2025-07-27 20:47:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:47:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:47:30] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:47:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:47:30] 2.9.2.0 3414332 8511 84716 148821 2 57 29792150 36864001 0 130560 0 5775280 99.988 314648 2138 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 20:47:30] CVMFS is ok
[2025-07-27 20:47:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:47:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:47:30] Further information can be found at the LHC@home message board.
[2025-07-27 20:47:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:47:30] Checking for apptainer binary...
[2025-07-27 20:47:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:47:30] Running /usr/bin/apptainer --version
[2025-07-27 20:47:30] apptainer version 1.3.6-4.2
[2025-07-27 20:47:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:47:30] thA371b
[2025-07-27 20:47:30] apptainer works
[2025-07-27 20:47:30] Set ATHENA_PROC_NUMBER=3
[2025-07-27 20:47:30] Set ATHENA_CORE_NUMBER=3
[2025-07-27 20:47:30] Starting ATLAS job with PandaID=6745967388
[2025-07-27 20:47:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:39:42]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:39:42] 2025-07-27 20:39:08,868 | INFO     | total number of processed events: 400 (read)
[2025-07-27 22:39:42] 2025-07-27 20:39:08,868 | INFO     | executing command: lscpu
[2025-07-27 22:39:42] 2025-07-27 20:39:08,881 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 22:39:42] 2025-07-27 20:39:09,674 | INFO     | monitor loop #513: job 0:6745967388 is in state 'finished'
[2025-07-27 22:39:42] 2025-07-27 20:39:09,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:39:42] 2025-07-27 20:39:11,328 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 22:39:42] 2025-07-27 20:39:11,329 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3866.7704166666663
[2025-07-27 22:39:42] 2025-07-27 20:39:11,331 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745967388/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:39:42] 2025-07-27 20:39:11,331 | INFO     | extracted standard info from prmon json
[2025-07-27 22:39:42] 2025-07-27 20:39:11,331 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:39:42] 2025-07-27 20:39:11,331 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:39:42] 2025-07-27 20:39:11,331 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:39:42] 2025-07-27 20:39:11,331 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:39:42] 2025-07-27 20:39:11,332 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:39:42] 2025-07-27 20:39:11,332 | INFO     | sum of square deviations: 412686807.5
[2025-07-27 22:39:42] 2025-07-27 20:39:11,332 | INFO     | sum of deviations: -7014161402.499999
[2025-07-27 22:39:42] 2025-07-27 20:39:11,332 | INFO     | mean x: 1753645399.5
[2025-07-27 22:39:42] 2025-07-27 20:39:11,332 | INFO     | mean y: 2396555.590909091
[2025-07-27 22:39:42] 2025-07-27 20:39:11,332 | INFO     | -- intersect: 29807933469.548576
[2025-07-27 22:39:42] 2025-07-27 20:39:11,332 | INFO     | intersect: 29807933469.548576
[2025-07-27 22:39:42] 2025-07-27 20:39:11,332 | INFO     | chi2: 1.6806801382434873
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | sum of square deviations: 358927660.0
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | sum of deviations: -6195435841.999999
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | mean x: 1753645247.0
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | mean y: 2398879.8666666667
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | -- intersect: 30271998657.762695
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | intersect: 30271998657.762695
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | chi2: 1.6799241762874209
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | current chi2=1.6799241762874209 (change=0.044979525780348126 %)
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | right removable region: 104
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | sum of square deviations: 358927660.0
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | sum of deviations: -20216634030.000004
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | mean x: 1753645552.0
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | mean y: 2432897.9714285713
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | -- intersect: 98776682681.6781
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | intersect: 98776682681.6781
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | chi2: 0.1956923272741132
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | current chi2=0.1956923272741132 (change=88.35636104567553 %)
[2025-07-27 22:39:42] 2025-07-27 20:39:11,333 | INFO     | sum of square deviations: 310052325.0
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | sum of deviations: -15544235604.5
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | mean x: 1753645704.5
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | mean y: 2418295.91
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | -- intersect: 87920101214.64761
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | intersect: 87920101214.64761
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | chi2: 0.18286925125414155
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | current chi2=0.18286925125414155 (change=6.552671838794126 %)
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | left removable region: 20
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | sum of square deviations: 183761585.0
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | sum of deviations: -4927526228.499998
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | mean x: 1753645826.5
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | mean y: 2384046.6071428573
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | -- intersect: 47026008737.144646
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | intersect: 47026008737.144646
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | chi2: 0.09652048192246579
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | -- intersect: 47026008737.144646
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | current memory leak: -26.81 B/s (using 84 data points, chi2=0.10)
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | could have reported an average CPU frequency of 4039 MHz (7 samples)
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | ..............................
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | . Timing measurements:
[2025-07-27 22:39:42] 2025-07-27 20:39:11,334 | INFO     | . get job = 0 s
[2025-07-27 22:39:42] 2025-07-27 20:39:11,335 | INFO     | . initial setup = 1 s
[2025-07-27 22:39:42] 2025-07-27 20:39:11,335 | INFO     | . payload setup = 3 s
[2025-07-27 22:39:42] 2025-07-27 20:39:11,335 | INFO     | . stage-in = 0 s
[2025-07-27 22:39:42] 2025-07-27 20:39:11,335 | INFO     | . payload execution = 6669 s
[2025-07-27 22:39:42] 2025-07-27 20:39:11,335 | INFO     | . stage-out = 0 s
[2025-07-27 22:39:42] 2025-07-27 20:39:11,335 | INFO     | . log creation = 0 s
[2025-07-27 22:39:42] 2025-07-27 20:39:11,335 | INFO     | ..............................
[2025-07-27 22:39:42] 2025-07-27 20:39:11,365 | INFO     | 
[2025-07-27 22:39:42] 2025-07-27 20:39:11,365 | INFO     | job summary report
[2025-07-27 22:39:42] 2025-07-27 20:39:11,365 | INFO     | --------------------------------------------------
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | PanDA job id: 6745967388
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | task id: 45759028
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | errors: (none)
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | pilot state: finished 
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | transexitcode: 0
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | exeerrorcode: 0
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | exeerrordiag: 
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | exitcode: 0
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | exitmsg: OK
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | cpuconsumptiontime: 19401 s
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | nevents: 400
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | neventsw: 0
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | pid: 1494996
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | pgrp: 1494996
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | corecount: 3
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | event service: False
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | sizes: {0: 2397462, 2: 2397724, 11: 2397752, 6676: 2425023, 6677: 2434027, 6680: 2434083, 6683: 2434405}
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | --------------------------------------------------
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | 
[2025-07-27 22:39:42] 2025-07-27 20:39:11,366 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | job 6745967388 has completed (purged errors)
[2025-07-27 22:39:42] 2025-07-27 20:39:11,379 | INFO     | overall cleanup function is called
[2025-07-27 22:39:42] 2025-07-27 20:39:12,386 | INFO     | --- collectZombieJob: --- 10, [1494996]
[2025-07-27 22:39:42] 2025-07-27 20:39:12,386 | INFO     | zombie collector waiting for pid 1494996
[2025-07-27 22:39:42] 2025-07-27 20:39:12,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:39:42] 2025-07-27 20:39:12,386 | INFO     | collected zombie processes
[2025-07-27 22:39:42] 2025-07-27 20:39:12,386 | INFO     | will attempt to kill all subprocesses of pid=1494996
[2025-07-27 22:39:42] 2025-07-27 20:39:12,432 | INFO     | process IDs to be killed: [1494996] (in reverse order)
[2025-07-27 22:39:42] 2025-07-27 20:39:12,459 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:39:42] 2025-07-27 20:39:12,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:39:42] 2025-07-27 20:39:12,460 | INFO     | did not find any defunct processes belonging to 1494996
[2025-07-27 22:39:42] 2025-07-27 20:39:12,462 | INFO     | did not find any defunct processes belonging to 1494996
[2025-07-27 22:39:42] 2025-07-27 20:39:12,462 | INFO     | ready for new job
[2025-07-27 22:39:42] 2025-07-27 20:39:12,462 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:39:42] 2025-07-27 20:39:12,462 | INFO     | ***************************************
[2025-07-27 22:39:42] 2025-07-27 20:39:12,463 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:39:42] 2025-07-27 20:39:12,463 | INFO     | ***************************************
[2025-07-27 22:39:42] 2025-07-27 20:39:12,463 | INFO     | 
[2025-07-27 22:39:42] 2025-07-27 20:39:12,463 | INFO     | architecture information:
[2025-07-27 22:39:42] 2025-07-27 20:39:12,463 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:39:42] 2025-07-27 20:39:12,472 | INFO     | cat /etc/os-release:
[2025-07-27 22:39:42] NAME="CentOS Linux"
[2025-07-27 22:39:42] VERSION="7 (Core)"
[2025-07-27 22:39:42] ID="centos"
[2025-07-27 22:39:42] ID_LIKE="rhel fedora"
[2025-07-27 22:39:42] VERSION_ID="7"
[2025-07-27 22:39:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:39:42] ANSI_COLOR="0;31"
[2025-07-27 22:39:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:39:42] HOME_URL="https://www.centos.org/"
[2025-07-27 22:39:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:39:42] 
[2025-07-27 22:39:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:39:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:39:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:39:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:39:42] 
[2025-07-27 22:39:42] 2025-07-27 20:39:12,472 | INFO     | ***************************************
[2025-07-27 22:39:42] 2025-07-27 20:39:12,974 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 22:39:42] 2025-07-27 20:39:12,983 | INFO     | sufficient remaining disk space (229783896064 B)
[2025-07-27 22:39:42] 2025-07-27 20:39:12,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:39:42] 2025-07-27 20:39:12,984 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:39:42] 2025-07-27 20:39:12,984 | INFO     | update_server=False
[2025-07-27 22:39:42] 2025-07-27 20:39:12,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:39:42] 2025-07-27 20:39:12,984 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:39:42] 2025-07-27 20:39:13,063 | INFO     | all payload control threads have been joined
[2025-07-27 22:39:42] 2025-07-27 20:39:13,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:39:42] 2025-07-27 20:39:13,183 | INFO     | aborting loop
[2025-07-27 22:39:42] 2025-07-27 20:39:13,640 | INFO     | all job control threads have been joined
[2025-07-27 22:39:42] 2025-07-27 20:39:13,696 | INFO     | all data control threads have been joined
[2025-07-27 22:39:42] 2025-07-27 20:39:13,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:39:42] 2025-07-27 20:39:13,989 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:13,989 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:14,041 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:14,068 | INFO     | [payload] control thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:14,188 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:14,385 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:14,482 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:39:42] 2025-07-27 20:39:14,645 | INFO     | [job] control thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:14,699 | INFO     | [data] control thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:14,746 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:15,014 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:15,286 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:15,390 | INFO     | [job] validate thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:15,446 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:15,449 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:15,784 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:18,488 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:39:42] 2025-07-27 20:39:20,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140206782486336)>', '<ExcThread(monitor, started 140206296516352)>']
[2025-07-27 22:39:42] 2025-07-27 20:39:25,566 | INFO     | all workflow threads have been joined
[2025-07-27 22:39:42] 2025-07-27 20:39:25,566 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:39:42] 2025-07-27 20:39:25,567 | INFO     | traces error code: 0
[2025-07-27 22:39:42] 2025-07-27 20:39:25,567 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:39:42] 2025-07-27 20:39:42,813 | INFO     | PID=1488509 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 22:39:42] 2025-07-27 20:39:42,813 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:39:42] 2025-07-27 20:39:42,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:39:42] 2025-07-27 20:39:42,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:39:42] 2025-07-27 20:39:42,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:39:42] 2025-07-27 20:39:42,813 | INFO     | [monitor] control thread has ended
[2025-07-27 22:39:42] 2025-07-27 20:39:42,861 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:39:42] 2025-07-27 20:39:42,864 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:39:42] 2025-07-27 20:39:42,866 [wrapper] pilotpid: 1488509
[2025-07-27 22:39:42] 2025-07-27 20:39:42,868 [wrapper] Pilot exit status: 0
[2025-07-27 22:39:42] 2025-07-27 20:39:42,875 [wrapper] pandaids: 6745967388
[2025-07-27 22:39:42] 2025-07-27 20:39:42,892 [wrapper] cleanup supervisor_pilot 1510882 1488510
[2025-07-27 22:39:42] 2025-07-27 20:39:42,894 [wrapper] Test setup, not cleaning
[2025-07-27 22:39:42] 2025-07-27 20:39:42,896 [wrapper] apfmon messages muted
[2025-07-27 22:39:42] 2025-07-27 20:39:42,899 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:39:42] 2025-07-27 20:39:42,901 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:39:42]  *** Error codes and diagnostics ***
[2025-07-27 22:39:42]     "exeErrorCode": 0,
[2025-07-27 22:39:42]     "exeErrorDiag": "",
[2025-07-27 22:39:42]     "pilotErrorCode": 0,
[2025-07-27 22:39:42]     "pilotErrorDiag": "",
[2025-07-27 22:39:42]  *** Listing of results directory ***
[2025-07-27 22:39:42] total 399940
[2025-07-27 22:39:42] -rw-r--r-- 1 boinc boinc    530466 Jul 27 05:23 pilot3.tar.gz
[2025-07-27 22:39:42] -rw-r--r-- 1 boinc boinc      5112 Jul 27 05:24 queuedata.json
[2025-07-27 22:39:42] -rwx------ 1 boinc boinc     36292 Jul 27 05:25 runpilot2-wrapper.sh
[2025-07-27 22:39:42] -rw-r--r-- 1 boinc boinc       100 Jul 27 20:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:39:42] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 20:47 run_atlas
[2025-07-27 22:39:42] -rw-r--r-- 1 boinc boinc       105 Jul 27 20:47 job.xml
[2025-07-27 22:39:42] -rw-r--r-- 2 boinc boinc 237296544 Jul 27 20:47 EVNT.45759023._000003.pool.root.1
[2025-07-27 22:39:42] -rw-r--r-- 1 boinc boinc      6921 Jul 27 20:47 init_data.xml
[2025-07-27 22:39:42] drwxrwx--x 2 boinc boinc      4096 Jul 27 20:47 shared
[2025-07-27 22:39:42] -rw-r--r-- 2 boinc boinc    542881 Jul 27 20:47 input.tar.gz
[2025-07-27 22:39:42] -rw-r--r-- 2 boinc boinc     15095 Jul 27 20:47 start_atlas.sh
[2025-07-27 22:39:42] -rw-r--r-- 1 boinc boinc         0 Jul 27 20:47 boinc_lockfile
[2025-07-27 22:39:42] -rw-r--r-- 1 boinc boinc      2552 Jul 27 20:47 pandaJob.out
[2025-07-27 22:39:42] -rw------- 1 boinc boinc    980125 Jul 27 20:47 agis_schedconf.cvmfs.json
[2025-07-27 22:39:42] -rw------- 1 boinc boinc   1593052 Jul 27 20:47 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:39:42] drwx------ 4 boinc boinc      4096 Jul 27 20:47 pilot3
[2025-07-27 22:39:42] -rw-r--r-- 1 boinc boinc       529 Jul 27 22:38 boinc_task_state.xml
[2025-07-27 22:39:42] -rw------- 1 boinc boinc 166613040 Jul 27 22:38 HITS.45759028._000057.pool.root.1
[2025-07-27 22:39:42] -rw------- 1 boinc boinc      1022 Jul 27 22:39 memory_monitor_summary.json
[2025-07-27 22:39:42] -rw------- 1 boinc boinc    237685 Jul 27 22:39 log.45759028._000057.job.log.tgz.1
[2025-07-27 22:39:42] -rw------- 1 boinc boinc        95 Jul 27 22:39 pilot_heartbeat.json
[2025-07-27 22:39:42] -rw------- 1 boinc boinc      7750 Jul 27 22:39 heartbeat.json
[2025-07-27 22:39:42] -rw-r--r-- 1 boinc boinc        27 Jul 27 22:39 wrapper_checkpoint.txt
[2025-07-27 22:39:42] -rw-r--r-- 1 boinc boinc      8192 Jul 27 22:39 boinc_mmap_file
[2025-07-27 22:39:42] -rw------- 1 boinc boinc       747 Jul 27 22:39 pilotlog.txt
[2025-07-27 22:39:42] -rw------- 1 boinc boinc    635530 Jul 27 22:39 log.45759028._000057.job.log.1
[2025-07-27 22:39:42] -rw------- 1 boinc boinc       357 Jul 27 22:39 output.list
[2025-07-27 22:39:42] -rw-r--r-- 1 boinc boinc       620 Jul 27 22:39 runtime_log
[2025-07-27 22:39:42] -rw------- 1 boinc boinc    890880 Jul 27 22:39 result.tar.gz
[2025-07-27 22:39:42] -rw------- 1 boinc boinc       660 Jul 27 22:39 yb3MDm3B7z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmep1KDm4QrNDn.diag
[2025-07-27 22:39:42] -rw-r--r-- 1 boinc boinc      8739 Jul 27 22:39 runtime_log.err
[2025-07-27 22:39:42] -rw-r--r-- 1 boinc boinc     21196 Jul 27 22:39 stderr.txt
[2025-07-27 22:39:42] HITS file was successfully produced:
[2025-07-27 22:39:42] -rw------- 1 boinc boinc 166613040 Jul 27 22:38 shared/HITS.pool.root.1
[2025-07-27 22:39:42]  *** Contents of shared directory: ***
[2025-07-27 22:39:42] total 395876
[2025-07-27 22:39:42] -rw-r--r-- 2 boinc boinc 237296544 Jul 27 20:47 ATLAS.root_0
[2025-07-27 22:39:42] -rw-r--r-- 2 boinc boinc    542881 Jul 27 20:47 input.tar.gz
[2025-07-27 22:39:42] -rw-r--r-- 2 boinc boinc     15095 Jul 27 20:47 start_atlas.sh
[2025-07-27 22:39:42] -rw------- 1 boinc boinc 166613040 Jul 27 22:38 HITS.pool.root.1
[2025-07-27 22:39:42] -rw------- 1 boinc boinc    890880 Jul 27 22:39 result.tar.gz
22:39:44 (1484864): run_atlas exited; CPU time 19430.444942
22:39:44 (1484864): called boinc_finish(0)

</stderr_txt>
]]>

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