Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:20:25 (1415709): wrapper (7.7.26015): starting
04:20:25 (1415709): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 04:20:25] Arguments: --nthreads 8
[2025-07-27 04:20:25] Threads: 8
[2025-07-27 04:20:25] Checking for CVMFS
[2025-07-27 04:20:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 04:20:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 04:20:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 04:20:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 04:20:25] 2.13.1.0 4026694 7926 91752 148805 3 188 21211814 40960001 11866 16776704 0 110733323 99.999 284315 58974 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 04:20:25] CVMFS is ok
[2025-07-27 04:20:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 04:20:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 04:20:25] Further information can be found at the LHC@home message board.
[2025-07-27 04:20:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 04:20:25] Checking for apptainer binary...
[2025-07-27 04:20:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 04:20:25] Running /usr/bin/apptainer --version
[2025-07-27 04:20:25] apptainer version 1.4.1-1.el9
[2025-07-27 04:20:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 04:20:25] c-208-38.aglt2.org
[2025-07-27 04:20:25] apptainer works
[2025-07-27 04:20:25] Set ATHENA_PROC_NUMBER=8
[2025-07-27 04:20:25] Set ATHENA_CORE_NUMBER=8
[2025-07-27 04:20:25] Starting ATLAS job with PandaID=6745919354
[2025-07-27 04:20:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 05:25:13]  *** The last 200 lines of the pilot log: ***
[2025-07-27 05:25:13]  is_altstaged=None
[2025-07-27 05:25:13]  is_tar=False
[2025-07-27 05:25:13]  lfn=log.45759065._000085.job.log.tgz.1
[2025-07-27 05:25:13]  mtime=0
[2025-07-27 05:25:13]  protocol_id=None
[2025-07-27 05:25:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 05:25:13]  replicas=None
[2025-07-27 05:25:13]  scope=mc23_13p6TeV
[2025-07-27 05:25:13]  status=None
[2025-07-27 05:25:13]  status_code=0
[2025-07-27 05:25:13]  storage_token=
[2025-07-27 05:25:13]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6745919354/log.45759065._000085.job.log.tgz.1
[2025-07-27 05:25:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/bc/log.45759065._000085.job.log.tgz.1
[2025-07-27 05:25:13]  workdir=None
[2025-07-27 05:25:13] ]
[2025-07-27 05:25:13] 2025-07-27 09:24:34,963 | INFO     | transferring file log.45759065._000085.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6745919354/log.45759065._000085.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 05:25:13] 2025-07-27 09:24:34,963 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6745919354/log.45759065._000085.job.log.tgz.1 /tmp/boinchome/slots/4/log.45759065._000085.job
[2025-07-27 05:25:13] 2025-07-27 09:24:34,981 | INFO     | adding to output.list: log.45759065._000085.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/bc/log.45759065._000085.job.log.tg
[2025-07-27 05:25:13] 2025-07-27 09:24:34,982 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 05:25:13] 2025-07-27 09:24:34,982 | INFO     | summary of transferred files:
[2025-07-27 05:25:13] 2025-07-27 09:24:34,982 | INFO     |  -- lfn=log.45759065._000085.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 05:25:13] 2025-07-27 09:24:34,982 | INFO     | stage-out finished correctly
[2025-07-27 05:25:13] 2025-07-27 09:24:36,227 | INFO     | monitor loop #285: job 0:6745919354 is in state 'finished'
[2025-07-27 05:25:13] 2025-07-27 09:24:36,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 05:25:13] 2025-07-27 09:24:37,608 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 05:25:13] 2025-07-27 09:24:37,747 | INFO     | job 6745919354 has state=finished
[2025-07-27 05:25:13] 2025-07-27 09:24:37,748 | INFO     | preparing for final server update for job 6745919354 in state='finished'
[2025-07-27 05:25:13] 2025-07-27 09:24:37,748 | INFO     | this job has now completed (state=finished)
[2025-07-27 05:25:13] 2025-07-27 09:24:37,748 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 05:25:13] 2025-07-27 09:24:37,748 | INFO     | log transfer has been attempted: DONE
[2025-07-27 05:25:13] 2025-07-27 09:24:37,749 | INFO     | job 6745919354 has finished - writing final server update
[2025-07-27 05:25:13] 2025-07-27 09:24:37,749 | INFO     | total number of processed events: 400 (read)
[2025-07-27 05:25:13] 2025-07-27 09:24:37,750 | INFO     | executing command: lscpu
[2025-07-27 05:25:13] 2025-07-27 09:24:37,805 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 05:25:13] 2025-07-27 09:24:38,730 | INFO     | monitor loop #286: job 0:6745919354 is in state 'finished'
[2025-07-27 05:25:13] 2025-07-27 09:24:38,730 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 05:25:13] 2025-07-27 09:24:41,070 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 05:25:13] 2025-07-27 09:24:41,075 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3718.040390624997
[2025-07-27 05:25:13] 2025-07-27 09:24:41,087 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6745919354/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 05:25:13] 2025-07-27 09:24:41,088 | INFO     | extracted standard info from prmon json
[2025-07-27 05:25:13] 2025-07-27 09:24:41,088 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 05:25:13] 2025-07-27 09:24:41,088 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 05:25:13] 2025-07-27 09:24:41,088 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 05:25:13] 2025-07-27 09:24:41,088 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 05:25:13] 2025-07-27 09:24:41,089 | INFO     | fitting pss+swap vs Time
[2025-07-27 05:25:13] 2025-07-27 09:24:41,090 | INFO     | sum of square deviations: 54438230.0
[2025-07-27 05:25:13] 2025-07-27 09:24:41,090 | INFO     | sum of deviations: -1086968760.0
[2025-07-27 05:25:13] 2025-07-27 09:24:41,090 | INFO     | mean x: 1753606440.5
[2025-07-27 05:25:13] 2025-07-27 09:24:41,090 | INFO     | mean y: 2557594.3214285714
[2025-07-27 05:25:13] 2025-07-27 09:24:41,090 | INFO     | -- intersect: 35016837414.923584
[2025-07-27 05:25:13] 2025-07-27 09:24:41,090 | INFO     | intersect: 35016837414.923584
[2025-07-27 05:25:13] 2025-07-27 09:24:41,090 | INFO     | chi2: 0.0012724547216867587
[2025-07-27 05:25:13] 2025-07-27 09:24:41,090 | INFO     | -- intersect: 35016837414.923584
[2025-07-27 05:25:13] 2025-07-27 09:24:41,090 | INFO     | current memory leak: -19.97 B/s (using 56 data points, chi2=0.00)
[2025-07-27 05:25:13] 2025-07-27 09:24:41,090 | INFO     | could have reported an average CPU frequency of 3735 MHz (6 samples)
[2025-07-27 05:25:13] 2025-07-27 09:24:41,090 | INFO     | ..............................
[2025-07-27 05:25:13] 2025-07-27 09:24:41,090 | INFO     | . Timing measurements:
[2025-07-27 05:25:13] 2025-07-27 09:24:41,090 | INFO     | . get job = 0 s
[2025-07-27 05:25:13] 2025-07-27 09:24:41,091 | INFO     | . initial setup = 2 s
[2025-07-27 05:25:13] 2025-07-27 09:24:41,091 | INFO     | . payload setup = 4 s
[2025-07-27 05:25:13] 2025-07-27 09:24:41,091 | INFO     | . stage-in = 0 s
[2025-07-27 05:25:13] 2025-07-27 09:24:41,091 | INFO     | . payload execution = 3816 s
[2025-07-27 05:25:13] 2025-07-27 09:24:41,091 | INFO     | . stage-out = 0 s
[2025-07-27 05:25:13] 2025-07-27 09:24:41,091 | INFO     | . log creation = 0 s
[2025-07-27 05:25:13] 2025-07-27 09:24:41,091 | INFO     | ..............................
[2025-07-27 05:25:13] 2025-07-27 09:24:41,147 | INFO     | 
[2025-07-27 05:25:13] 2025-07-27 09:24:41,147 | INFO     | job summary report
[2025-07-27 05:25:13] 2025-07-27 09:24:41,147 | INFO     | --------------------------------------------------
[2025-07-27 05:25:13] 2025-07-27 09:24:41,147 | INFO     | PanDA job id: 6745919354
[2025-07-27 05:25:13] 2025-07-27 09:24:41,147 | INFO     | task id: 45759065
[2025-07-27 05:25:13] 2025-07-27 09:24:41,147 | INFO     | errors: (none)
[2025-07-27 05:25:13] 2025-07-27 09:24:41,147 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 05:25:13] 2025-07-27 09:24:41,147 | INFO     | pilot state: finished 
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | transexitcode: 0
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | exeerrorcode: 0
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | exeerrordiag: 
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | exitcode: 0
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | exitmsg: OK
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | cpuconsumptiontime: 28572 s
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | nevents: 400
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | neventsw: 0
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | pid: 1425785
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | pgrp: 1425785
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | corecount: 8
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | event service: False
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | sizes: {0: 2397462, 4: 2397724, 11: 2397752, 3825: 2423621, 3826: 2432619, 3829: 2432675, 3832: 2432997}
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | --------------------------------------------------
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | 
[2025-07-27 05:25:13] 2025-07-27 09:24:41,148 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-07-27 05:25:13] 2025-07-27 09:24:41,165 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,166 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 05:25:13] 2025-07-27 09:24:41,167 | INFO     | job 6745919354 has completed (purged errors)
[2025-07-27 05:25:13] 2025-07-27 09:24:41,167 | INFO     | overall cleanup function is called
[2025-07-27 05:25:13] 2025-07-27 09:24:42,172 | INFO     | --- collectZombieJob: --- 10, [1425785]
[2025-07-27 05:25:13] 2025-07-27 09:24:42,172 | INFO     | zombie collector waiting for pid 1425785
[2025-07-27 05:25:13] 2025-07-27 09:24:42,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 05:25:13] 2025-07-27 09:24:42,172 | INFO     | collected zombie processes
[2025-07-27 05:25:13] 2025-07-27 09:24:42,172 | INFO     | will attempt to kill all subprocesses of pid=1425785
[2025-07-27 05:25:13] 2025-07-27 09:24:42,521 | INFO     | process IDs to be killed: [1425785] (in reverse order)
[2025-07-27 05:25:13] 2025-07-27 09:24:42,639 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 05:25:13] 2025-07-27 09:24:42,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 05:25:13] 2025-07-27 09:24:42,654 | INFO     | did not find any defunct processes belonging to 1425785
[2025-07-27 05:25:13] 2025-07-27 09:24:42,666 | INFO     | did not find any defunct processes belonging to 1425785
[2025-07-27 05:25:13] 2025-07-27 09:24:42,666 | INFO     | ready for new job
[2025-07-27 05:25:13] 2025-07-27 09:24:42,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 05:25:13] 2025-07-27 09:24:42,668 | INFO     | ***************************************
[2025-07-27 05:25:13] 2025-07-27 09:24:42,668 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 05:25:13] 2025-07-27 09:24:42,668 | INFO     | ***************************************
[2025-07-27 05:25:13] 2025-07-27 09:24:42,668 | INFO     | 
[2025-07-27 05:25:13] 2025-07-27 09:24:42,672 | INFO     | architecture information:
[2025-07-27 05:25:13] 2025-07-27 09:24:42,672 | INFO     | executing command: cat /etc/os-release
[2025-07-27 05:25:13] 2025-07-27 09:24:42,687 | INFO     | cat /etc/os-release:
[2025-07-27 05:25:13] NAME="CentOS Linux"
[2025-07-27 05:25:13] VERSION="7 (Core)"
[2025-07-27 05:25:13] ID="centos"
[2025-07-27 05:25:13] ID_LIKE="rhel fedora"
[2025-07-27 05:25:13] VERSION_ID="7"
[2025-07-27 05:25:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 05:25:13] ANSI_COLOR="0;31"
[2025-07-27 05:25:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 05:25:13] HOME_URL="https://www.centos.org/"
[2025-07-27 05:25:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 05:25:13] 
[2025-07-27 05:25:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 05:25:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 05:25:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 05:25:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 05:25:13] 
[2025-07-27 05:25:13] 2025-07-27 09:24:42,688 | INFO     | ***************************************
[2025-07-27 05:25:13] 2025-07-27 09:24:43,191 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-07-27 05:25:13] 2025-07-27 09:24:43,205 | INFO     | sufficient remaining disk space (164594974720 B)
[2025-07-27 05:25:13] 2025-07-27 09:24:43,206 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 05:25:13] 2025-07-27 09:24:43,206 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 05:25:13] 2025-07-27 09:24:43,206 | INFO     | update_server=False
[2025-07-27 05:25:13] 2025-07-27 09:24:43,206 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 05:25:13] 2025-07-27 09:24:43,206 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 05:25:13] 2025-07-27 09:24:43,206 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 05:25:13] 2025-07-27 09:24:43,207 | INFO     | aborting loop
[2025-07-27 05:25:13] 2025-07-27 09:24:43,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 05:25:13] 2025-07-27 09:24:43,891 | INFO     | all data control threads have been joined
[2025-07-27 05:25:13] 2025-07-27 09:24:44,211 | INFO     | [job] retrieve thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:44,211 | INFO     | [job] job monitor thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:44,338 | INFO     | all payload control threads have been joined
[2025-07-27 05:25:13] 2025-07-27 09:24:44,417 | INFO     | [payload] validate_post thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:44,447 | INFO     | [data] copytool_in thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:44,761 | INFO     | all job control threads have been joined
[2025-07-27 05:25:13] 2025-07-27 09:24:44,896 | INFO     | [data] control thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:44,979 | INFO     | [job] validate thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:44,991 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:45,212 | INFO     | [data] copytool_out thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:45,259 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:45,281 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:45,343 | INFO     | [payload] control thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:45,425 | INFO     | [payload] failed_post thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:45,766 | INFO     | [job] control thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:46,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 05:25:13] 2025-07-27 09:24:47,162 | INFO     | [job] queue monitor thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:47,676 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:53,475 | INFO     | job.realtimelogging is not enabled
[2025-07-27 05:25:13] 2025-07-27 09:24:54,480 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 05:25:13] 2025-07-27 09:24:56,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140115324458816)>', '<ExcThread(monitor, started 140114835527424)>']
[2025-07-27 05:25:13] 2025-07-27 09:25:01,549 | INFO     | all workflow threads have been joined
[2025-07-27 05:25:13] 2025-07-27 09:25:01,549 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 05:25:13] 2025-07-27 09:25:01,549 | INFO     | traces error code: 0
[2025-07-27 05:25:13] 2025-07-27 09:25:01,550 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 05:25:13] 2025-07-27 09:25:12,770 | INFO     | PID=1419310 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 05:25:13] 2025-07-27 09:25:12,770 | INFO     | .. there are 16 such processes running
[2025-07-27 05:25:13] 2025-07-27 09:25:12,771 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 05:25:13] 2025-07-27 09:25:12,771 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 05:25:13] 2025-07-27 09:25:12,771 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 05:25:13] 2025-07-27 09:25:12,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 05:25:13] 2025-07-27 09:25:12,771 | INFO     | [monitor] control thread has ended
[2025-07-27 05:25:13] 2025-07-27 09:25:12,855 [wrapper] ==== pilot stdout END ====
[2025-07-27 05:25:13] 2025-07-27 09:25:12,858 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 05:25:13] 2025-07-27 09:25:12,861 [wrapper] pilotpid: 1419310
[2025-07-27 05:25:13] 2025-07-27 09:25:12,863 [wrapper] Pilot exit status: 0
[2025-07-27 05:25:13] 2025-07-27 09:25:12,872 [wrapper] pandaids: 6745919354
[2025-07-27 05:25:13] 2025-07-27 09:25:12,952 [wrapper] cleanup supervisor_pilot 1735980 1419311
[2025-07-27 05:25:13] 2025-07-27 09:25:12,954 [wrapper] Test setup, not cleaning
[2025-07-27 05:25:13] 2025-07-27 09:25:12,957 [wrapper] apfmon messages muted
[2025-07-27 05:25:13] 2025-07-27 09:25:12,959 [wrapper] ==== wrapper stdout END ====
[2025-07-27 05:25:13] 2025-07-27 09:25:12,961 [wrapper] ==== wrapper stderr END ====
[2025-07-27 05:25:13]  *** Error codes and diagnostics ***
[2025-07-27 05:25:13]     "exeErrorCode": 0,
[2025-07-27 05:25:13]     "exeErrorDiag": "",
[2025-07-27 05:25:13]     "pilotErrorCode": 0,
[2025-07-27 05:25:13]     "pilotErrorDiag": "",
[2025-07-27 05:25:13]  *** Listing of results directory ***
[2025-07-27 05:25:13] total 398884
[2025-07-27 05:25:13] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 20:36 pilot3.tar.gz
[2025-07-27 05:25:13] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 20:41 queuedata.json
[2025-07-27 05:25:13] -rwx------. 1 boincer umatlas     36292 Jul 26 20:41 runpilot2-wrapper.sh
[2025-07-27 05:25:13] -rw-r--r--. 1 boincer umatlas       100 Jul 27 04:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 05:25:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 04:20 run_atlas
[2025-07-27 05:25:13] -rw-r--r--. 1 boincer umatlas       105 Jul 27 04:20 job.xml
[2025-07-27 05:25:13] -rw-r--r--. 2 boincer umatlas 234538167 Jul 27 04:20 EVNT.45759062._000004.pool.root.1
[2025-07-27 05:25:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 04:20 start_atlas.sh
[2025-07-27 05:25:13] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 04:20 shared
[2025-07-27 05:25:13] -rw-r--r--. 2 boincer umatlas    542881 Jul 27 04:20 input.tar.gz
[2025-07-27 05:25:13] -rw-r--r--. 1 boincer umatlas         0 Jul 27 04:20 boinc_lockfile
[2025-07-27 05:25:13] -rw-r--r--. 1 boincer umatlas      2555 Jul 27 04:20 pandaJob.out
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas    980109 Jul 27 04:20 agis_schedconf.cvmfs.json
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas   1593052 Jul 27 04:20 agis_ddmendpoints.agis.ALL.json
[2025-07-27 05:25:13] drwx------. 4 boincer umatlas      4096 Jul 27 04:20 pilot3
[2025-07-27 05:25:13] -rw-r--r--. 1 boincer umatlas      7173 Jul 27 05:22 init_data.xml
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas 168666917 Jul 27 05:24 HITS.45759065._000085.pool.root.1
[2025-07-27 05:25:13] -rw-r--r--. 1 boincer umatlas       529 Jul 27 05:24 boinc_task_state.xml
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas      1029 Jul 27 05:24 memory_monitor_summary.json
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas    296042 Jul 27 05:24 log.45759065._000085.job.log.tgz.1
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas      7758 Jul 27 05:24 heartbeat.json
[2025-07-27 05:25:13] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 05:25 boinc_mmap_file
[2025-07-27 05:25:13] -rw-r--r--. 1 boincer umatlas        27 Jul 27 05:25 wrapper_checkpoint.txt
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas       823 Jul 27 05:25 pilotlog.txt
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas        95 Jul 27 05:25 pilot_heartbeat.json
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas    389348 Jul 27 05:25 log.45759065._000085.job.log.1
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas       357 Jul 27 05:25 output.list
[2025-07-27 05:25:13] -rw-r--r--. 1 boincer umatlas       620 Jul 27 05:25 runtime_log
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas    706560 Jul 27 05:25 result.tar.gz
[2025-07-27 05:25:13] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 05:25 runtime_log.err
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas       652 Jul 27 05:25 IG7MDmyc4z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCgTLDmzXnlXm.diag
[2025-07-27 05:25:13] -rw-r--r--. 1 boincer umatlas     21476 Jul 27 05:25 stderr.txt
[2025-07-27 05:25:13] HITS file was successfully produced:
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas 168666917 Jul 27 05:24 shared/HITS.pool.root.1
[2025-07-27 05:25:13]  *** Contents of shared directory: ***
[2025-07-27 05:25:13] total 395004
[2025-07-27 05:25:13] -rw-r--r--. 2 boincer umatlas 234538167 Jul 27 04:20 ATLAS.root_0
[2025-07-27 05:25:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 04:20 start_atlas.sh
[2025-07-27 05:25:13] -rw-r--r--. 2 boincer umatlas    542881 Jul 27 04:20 input.tar.gz
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas 168666917 Jul 27 05:24 HITS.pool.root.1
[2025-07-27 05:25:13] -rw-------. 1 boincer umatlas    706560 Jul 27 05:25 result.tar.gz
05:25:14 (1415709): run_atlas exited; CPU time 28676.276821
05:25:14 (1415709): called boinc_finish(0)

</stderr_txt>
]]>

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