Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:11:41 (31988): wrapper (7.7.26015): starting
21:11:41 (31988): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 21:11:41] Arguments: --nthreads 8
[2025-07-27 21:11:41] Threads: 8
[2025-07-27 21:11:41] Checking for CVMFS
[2025-07-27 21:11:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 21:11:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 21:11:42] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 21:11:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 21:11:42] 2.11.2.0 31313 109919 112092 148821 0 155 21136174 25165824 4097 130560 0 75169768 99.850 54772068 3640 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 21:11:42] CVMFS is ok
[2025-07-27 21:11:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 21:11:42] Checking for apptainer binary...
[2025-07-27 21:11:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 21:11:42] Running /usr/bin/apptainer --version
[2025-07-27 21:11:42] apptainer version 1.3.2-1.el7
[2025-07-27 21:11:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 21:11:44] cg-vwn451.simple-grid.lan
[2025-07-27 21:11:44] apptainer works
[2025-07-27 21:11:44] Set ATHENA_PROC_NUMBER=8
[2025-07-27 21:11:44] Set ATHENA_CORE_NUMBER=8
[2025-07-27 21:11:44] Starting ATLAS job with PandaID=6745967416
[2025-07-27 21:11:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 04:01:30]  *** The last 200 lines of the pilot log: ***
[2025-07-28 04:01:30] 2025-07-28 00:43:40,662 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 04:01:30] 2025-07-28 00:43:40,670 | INFO     | fitting pss+swap vs Time
[2025-07-28 04:01:30] 2025-07-28 00:43:40,671 | INFO     | sum of square deviations: 10546523325.0
[2025-07-28 04:01:30] 2025-07-28 00:43:40,674 | INFO     | sum of deviations: 38889332897.50001
[2025-07-28 04:01:30] 2025-07-28 00:43:40,674 | INFO     | mean x: 1753653460.5
[2025-07-28 04:01:30] 2025-07-28 00:43:40,674 | INFO     | mean y: 2485989.4783950616
[2025-07-28 04:01:30] 2025-07-28 00:43:40,674 | INFO     | -- intersect: -6463949546.730631
[2025-07-28 04:01:30] 2025-07-28 00:43:40,675 | INFO     | intersect: -6463949546.730631
[2025-07-28 04:01:30] 2025-07-28 00:43:40,675 | INFO     | chi2: 2.460987958372971
[2025-07-28 04:01:30] 2025-07-28 00:43:40,676 | INFO     | sum of square deviations: 10065751520.0
[2025-07-28 04:01:30] 2025-07-28 00:43:40,679 | INFO     | sum of deviations: 59167545970.000015
[2025-07-28 04:01:30] 2025-07-28 00:43:40,679 | INFO     | mean x: 1753653308.0
[2025-07-28 04:01:30] 2025-07-28 00:43:40,679 | INFO     | mean y: 2492336.7210031347
[2025-07-28 04:01:30] 2025-07-28 00:43:40,679 | INFO     | -- intersect: -10305666225.545254
[2025-07-28 04:01:30] 2025-07-28 00:43:40,679 | INFO     | intersect: -10305666225.545254
[2025-07-28 04:01:30] 2025-07-28 00:43:40,680 | INFO     | chi2: 1.6874972283093561
[2025-07-28 04:01:30] 2025-07-28 00:43:40,680 | INFO     | current chi2=1.6874972283093561 (change=31.430089994222953 %)
[2025-07-28 04:01:30] 2025-07-28 00:43:40,680 | INFO     | sum of square deviations: 9599817202.5
[2025-07-28 04:01:30] 2025-07-28 00:43:40,684 | INFO     | sum of deviations: 57863126240.00001
[2025-07-28 04:01:30] 2025-07-28 00:43:40,684 | INFO     | mean x: 1753653155.5
[2025-07-28 04:01:30] 2025-07-28 00:43:40,684 | INFO     | mean y: 2491909.74522293
[2025-07-28 04:01:30] 2025-07-28 00:43:40,684 | INFO     | -- intersect: -10567694144.573124
[2025-07-28 04:01:30] 2025-07-28 00:43:40,684 | INFO     | intersect: -10567694144.573124
[2025-07-28 04:01:30] 2025-07-28 00:43:40,685 | INFO     | chi2: 1.6879773662862945
[2025-07-28 04:01:30] 2025-07-28 00:43:40,685 | INFO     | current chi2=1.6879773662862945 (change=-0.028452667588638854 %)
[2025-07-28 04:01:30] 2025-07-28 00:43:40,685 | INFO     | right removable region: 313
[2025-07-28 04:01:30] 2025-07-28 00:43:40,686 | INFO     | sum of square deviations: 10065751520.0
[2025-07-28 04:01:30] 2025-07-28 00:43:40,689 | INFO     | sum of deviations: -20295704608.999992
[2025-07-28 04:01:30] 2025-07-28 00:43:40,689 | INFO     | mean x: 1753653613.0
[2025-07-28 04:01:30] 2025-07-28 00:43:40,689 | INFO     | mean y: 2504674.865203762
[2025-07-28 04:01:30] 2025-07-28 00:43:40,690 | INFO     | -- intersect: 3538419071.8414555
[2025-07-28 04:01:30] 2025-07-28 00:43:40,690 | INFO     | intersect: 3538419071.8414555
[2025-07-28 04:01:30] 2025-07-28 00:43:40,690 | INFO     | chi2: 0.8626060852730293
[2025-07-28 04:01:30] 2025-07-28 00:43:40,690 | INFO     | current chi2=0.8626060852730293 (change=64.94878886594299 %)
[2025-07-28 04:01:30] 2025-07-28 00:43:40,691 | INFO     | sum of square deviations: 9599817202.5
[2025-07-28 04:01:30] 2025-07-28 00:43:40,694 | INFO     | sum of deviations: -30855811383.500004
[2025-07-28 04:01:30] 2025-07-28 00:43:40,694 | INFO     | mean x: 1753653765.5
[2025-07-28 04:01:30] 2025-07-28 00:43:40,694 | INFO     | mean y: 2508115.4363057325
[2025-07-28 04:01:30] 2025-07-28 00:43:40,694 | INFO     | -- intersect: 5639116467.326696
[2025-07-28 04:01:30] 2025-07-28 00:43:40,694 | INFO     | intersect: 5639116467.326696
[2025-07-28 04:01:30] 2025-07-28 00:43:40,695 | INFO     | chi2: 0.8084200792454277
[2025-07-28 04:01:30] 2025-07-28 00:43:40,695 | INFO     | current chi2=0.8084200792454277 (change=6.281662853149339 %)
[2025-07-28 04:01:30] 2025-07-28 00:43:40,695 | INFO     | left removable region: 20
[2025-07-28 04:01:30] 2025-07-28 00:43:40,696 | INFO     | sum of square deviations: 7799669962.0
[2025-07-28 04:01:30] 2025-07-28 00:43:40,698 | INFO     | sum of deviations: -9525304086.0
[2025-07-28 04:01:30] 2025-07-28 00:43:40,698 | INFO     | mean x: 1753653735.0
[2025-07-28 04:01:30] 2025-07-28 00:43:40,699 | INFO     | mean y: 2514619.846416382
[2025-07-28 04:01:30] 2025-07-28 00:43:40,699 | INFO     | -- intersect: 2144154608.3083615
[2025-07-28 04:01:30] 2025-07-28 00:43:40,699 | INFO     | intersect: 2144154608.3083615
[2025-07-28 04:01:30] 2025-07-28 00:43:40,699 | INFO     | chi2: 0.019489974655307725
[2025-07-28 04:01:30] 2025-07-28 00:43:40,699 | INFO     | -- intersect: 2144154608.3083615
[2025-07-28 04:01:30] 2025-07-28 00:43:40,699 | INFO     | current memory leak: -1.22 B/s (using 293 data points, chi2=0.02)
[2025-07-28 04:01:30] 2025-07-28 00:43:40,700 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-07-28 04:01:30] 2025-07-28 00:43:40,700 | INFO     | ..............................
[2025-07-28 04:01:30] 2025-07-28 00:43:40,701 | INFO     | . Timing measurements:
[2025-07-28 04:01:30] 2025-07-28 00:43:40,701 | INFO     | . get job = 0 s
[2025-07-28 04:01:30] 2025-07-28 00:43:40,701 | INFO     | . initial setup = 2 s
[2025-07-28 04:01:30] 2025-07-28 00:43:40,701 | INFO     | . payload setup = 15 s
[2025-07-28 04:01:30] 2025-07-28 00:43:40,701 | INFO     | . stage-in = 0 s
[2025-07-28 04:01:30] 2025-07-28 00:43:40,701 | INFO     | . payload execution = 19738 s
[2025-07-28 04:01:30] 2025-07-28 00:43:40,701 | INFO     | . stage-out = 3 s
[2025-07-28 04:01:30] 2025-07-28 00:43:40,701 | INFO     | . log creation = 1 s
[2025-07-28 04:01:30] 2025-07-28 00:43:40,701 | INFO     | ..............................
[2025-07-28 04:01:30] 2025-07-28 00:43:40,938 | INFO     | 
[2025-07-28 04:01:30] 2025-07-28 00:43:40,938 | INFO     | job summary report
[2025-07-28 04:01:30] 2025-07-28 00:43:40,938 | INFO     | --------------------------------------------------
[2025-07-28 04:01:30] 2025-07-28 00:43:40,938 | INFO     | PanDA job id: 6745967416
[2025-07-28 04:01:30] 2025-07-28 00:43:40,939 | INFO     | task id: 45759028
[2025-07-28 04:01:30] 2025-07-28 00:43:40,939 | INFO     | errors: (none)
[2025-07-28 04:01:30] 2025-07-28 00:43:40,939 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 04:01:30] 2025-07-28 00:43:40,939 | INFO     | pilot state: finished 
[2025-07-28 04:01:30] 2025-07-28 00:43:40,939 | INFO     | transexitcode: 0
[2025-07-28 04:01:30] 2025-07-28 00:43:40,939 | INFO     | exeerrorcode: 0
[2025-07-28 04:01:30] 2025-07-28 00:43:40,939 | INFO     | exeerrordiag: 
[2025-07-28 04:01:30] 2025-07-28 00:43:40,939 | INFO     | exitcode: 0
[2025-07-28 04:01:30] 2025-07-28 00:43:40,939 | INFO     | exitmsg: OK
[2025-07-28 04:01:30] 2025-07-28 00:43:40,939 | INFO     | cpuconsumptiontime: 75688 s
[2025-07-28 04:01:30] 2025-07-28 00:43:40,939 | INFO     | nevents: 400
[2025-07-28 04:01:30] 2025-07-28 00:43:40,939 | INFO     | neventsw: 0
[2025-07-28 04:01:30] 2025-07-28 00:43:40,940 | INFO     | pid: 10116
[2025-07-28 04:01:30] 2025-07-28 00:43:40,940 | INFO     | pgrp: 10116
[2025-07-28 04:01:30] 2025-07-28 00:43:40,940 | INFO     | corecount: 8
[2025-07-28 04:01:30] 2025-07-28 00:43:40,940 | INFO     | event service: False
[2025-07-28 04:01:30] 2025-07-28 00:43:40,940 | INFO     | sizes: {0: 2397241, 1: 2397496, 2: 2397496, 12: 2397524, 14: 2397814, 23: 2397842, 19758: 2430433, 19761: 2439433, 19763: 2439489, 19855: 2439683}
[2025-07-28 04:01:30] 2025-07-28 00:43:40,940 | INFO     | --------------------------------------------------
[2025-07-28 04:01:30] 2025-07-28 00:43:40,940 | INFO     | 
[2025-07-28 04:01:30] 2025-07-28 00:43:40,940 | INFO     | executing command: ls -lF /var/lib/boinc/slots/25
[2025-07-28 04:01:30] 2025-07-28 00:43:41,713 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,714 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,714 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,714 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,714 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,714 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,715 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,715 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,715 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,715 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,715 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,715 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,715 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,715 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,715 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,715 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,716 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 04:01:30] 2025-07-28 00:43:41,716 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,716 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 04:01:30] 2025-07-28 00:43:41,716 | INFO     | job 6745967416 has completed (purged errors)
[2025-07-28 04:01:30] 2025-07-28 00:43:41,716 | INFO     | overall cleanup function is called
[2025-07-28 04:01:30] 2025-07-28 00:43:42,737 | INFO     | --- collectZombieJob: --- 10, [10116]
[2025-07-28 04:01:30] 2025-07-28 00:43:42,737 | INFO     | zombie collector waiting for pid 10116
[2025-07-28 04:01:30] 2025-07-28 00:43:42,737 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 04:01:30] 2025-07-28 00:43:42,738 | INFO     | collected zombie processes
[2025-07-28 04:01:30] 2025-07-28 00:43:42,738 | INFO     | will attempt to kill all subprocesses of pid=10116
[2025-07-28 04:01:30] 2025-07-28 00:43:42,931 | INFO     | process IDs to be killed: [10116] (in reverse order)
[2025-07-28 04:01:30] 2025-07-28 00:43:43,952 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 04:01:30] 2025-07-28 00:43:43,952 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 04:01:30] 2025-07-28 00:43:43,955 | INFO     | did not find any defunct processes belonging to 10116
[2025-07-28 04:01:30] 2025-07-28 00:43:43,958 | INFO     | did not find any defunct processes belonging to 10116
[2025-07-28 04:01:30] 2025-07-28 00:43:43,958 | INFO     | ready for new job
[2025-07-28 04:01:30] 2025-07-28 00:43:43,959 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 04:01:30] 2025-07-28 00:43:43,961 | INFO     | ***************************************
[2025-07-28 04:01:30] 2025-07-28 00:43:43,961 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 04:01:30] 2025-07-28 00:43:43,961 | INFO     | ***************************************
[2025-07-28 04:01:30] 2025-07-28 00:43:43,962 | INFO     | 
[2025-07-28 04:01:30] 2025-07-28 00:43:43,962 | INFO     | pilot is running in a VM
[2025-07-28 04:01:30] 2025-07-28 00:43:43,962 | INFO     | architecture information:
[2025-07-28 04:01:30] 2025-07-28 00:43:43,974 | INFO     | executing command: cat /etc/os-release
[2025-07-28 04:01:30] 2025-07-28 00:43:44,334 | INFO     | cat /etc/os-release:
[2025-07-28 04:01:30] NAME="CentOS Linux"
[2025-07-28 04:01:30] VERSION="7 (Core)"
[2025-07-28 04:01:30] ID="centos"
[2025-07-28 04:01:30] ID_LIKE="rhel fedora"
[2025-07-28 04:01:30] VERSION_ID="7"
[2025-07-28 04:01:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 04:01:30] ANSI_COLOR="0;31"
[2025-07-28 04:01:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 04:01:30] HOME_URL="https://www.centos.org/"
[2025-07-28 04:01:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 04:01:30] 
[2025-07-28 04:01:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 04:01:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 04:01:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 04:01:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 04:01:30] 
[2025-07-28 04:01:30] 2025-07-28 00:43:44,335 | INFO     | ***************************************
[2025-07-28 04:01:30] 2025-07-28 00:43:44,838 | INFO     | executing command: df -mP /var/lib/boinc/slots/25
[2025-07-28 04:01:30] 2025-07-28 00:43:45,046 | INFO     | sufficient remaining disk space (496710451200 B)
[2025-07-28 04:01:30] 2025-07-28 00:43:45,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 04:01:30] 2025-07-28 00:43:45,046 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 04:01:30] 2025-07-28 00:43:45,046 | INFO     | update_server=False
[2025-07-28 04:01:30] 2025-07-28 00:43:45,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 04:01:30] 2025-07-28 00:43:45,508 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 04:01:30] 2025-07-28 00:43:45,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 04:01:30] 2025-07-28 00:43:45,654 | INFO     | aborting loop
[2025-07-28 04:01:30] 2025-07-28 00:43:45,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 04:01:30] 2025-07-28 00:43:45,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 04:01:30] 2025-07-28 00:43:45,954 | INFO     | all data control threads have been joined
[2025-07-28 04:01:30] 2025-07-28 00:43:46,052 | INFO     | [job] retrieve thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:46,068 | INFO     | [payload] failed_post thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:46,237 | INFO     | all job control threads have been joined
[2025-07-28 04:01:30] 2025-07-28 00:43:46,440 | INFO     | all payload control threads have been joined
[2025-07-28 04:01:30] 2025-07-28 00:43:46,553 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:46,661 | INFO     | [job] job monitor thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:46,844 | INFO     | [job] queue monitor thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:46,873 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:46,960 | INFO     | [data] control thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:47,080 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:47,176 | INFO     | [job] validate thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:47,243 | INFO     | [job] control thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:47,306 | INFO     | [data] copytool_in thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:47,446 | INFO     | [payload] control thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:47,572 | INFO     | [payload] validate_post thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:47,754 | INFO     | [data] copytool_out thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:49,524 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:55,435 | INFO     | job.realtimelogging is not enabled
[2025-07-28 04:01:30] 2025-07-28 00:43:56,442 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 04:01:30] 2025-07-28 00:43:58,531 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139873025488704)>', '<ExcThread(monitor, started 139872429917952)>']
[2025-07-28 04:01:30] 2025-07-28 00:44:03,557 | INFO     | all workflow threads have been joined
[2025-07-28 04:01:30] 2025-07-28 00:44:03,557 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 04:01:30] 2025-07-28 00:44:03,558 | INFO     | traces error code: 0
[2025-07-28 04:01:30] 2025-07-28 00:44:03,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 04:01:30] 2025-07-28 00:44:13,812 | INFO     | PID=3568 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-28 04:01:30] 2025-07-28 00:44:13,812 | INFO     | .. there are 9 such processes running
[2025-07-28 04:01:30] 2025-07-28 00:44:13,812 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 04:01:30] 2025-07-28 00:44:13,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 04:01:30] 2025-07-28 00:44:13,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 04:01:30] 2025-07-28 00:44:13,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 04:01:30] 2025-07-28 00:44:13,813 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 04:01:30] 2025-07-28 00:44:13,813 | INFO     | [monitor] control thread has ended
[2025-07-28 04:01:30] 2025-07-28 00:44:14,165 [wrapper] ==== pilot stdout END ====
[2025-07-28 04:01:30] 2025-07-28 00:44:14,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 04:01:30] 2025-07-28 00:44:14,264 [wrapper] pilotpid: 3568
[2025-07-28 04:01:30] 2025-07-28 00:44:14,334 [wrapper] Pilot exit status: 0
[2025-07-28 04:01:30] 2025-07-28 00:44:14,755 [wrapper] pandaids: 6745967416
[2025-07-28 04:01:30] 2025-07-28 00:44:15,630 [wrapper] cleanup supervisor_pilot 26494 3569
[2025-07-28 04:01:30] 2025-07-28 00:44:15,723 [wrapper] Test setup, not cleaning
[2025-07-28 04:01:30] 2025-07-28 00:44:15,776 [wrapper] apfmon messages muted
[2025-07-28 04:01:30] 2025-07-28 00:44:15,890 [wrapper] ==== wrapper stdout END ====
[2025-07-28 04:01:30] 2025-07-28 00:44:16,022 [wrapper] ==== wrapper stderr END ====
[2025-07-28 04:01:30]  *** Error codes and diagnostics ***
[2025-07-28 04:01:30]     "exeErrorCode": 0,
[2025-07-28 04:01:30]     "exeErrorDiag": "",
[2025-07-28 04:01:30]     "pilotErrorCode": 0,
[2025-07-28 04:01:30]     "pilotErrorDiag": "",
[2025-07-28 04:01:30]  *** Listing of results directory ***
[2025-07-28 04:01:30] total 408620
[2025-07-28 04:01:30] -rw-r--r--. 1 boinc boinc    530466 Jul 27 04:38 pilot3.tar.gz
[2025-07-28 04:01:30] -rwx------. 1 boinc boinc     36292 Jul 27 05:22 runpilot2-wrapper.sh
[2025-07-28 04:01:30] -rw-r--r--. 1 boinc boinc      5112 Jul 27 05:22 queuedata.json
[2025-07-28 04:01:30] -rw-r--r--. 1 boinc boinc       100 Jul 27 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 04:01:30] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 21:11 run_atlas
[2025-07-28 04:01:30] -rw-r--r--. 1 boinc boinc       105 Jul 27 21:11 job.xml
[2025-07-28 04:01:30] -rw-r--r--. 1 boinc boinc      6393 Jul 27 21:11 init_data.xml
[2025-07-28 04:01:30] -rw-r--r--. 2 boinc boinc 235960907 Jul 27 21:11 EVNT.45759023._000004.pool.root.1
[2025-07-28 04:01:30] -rw-r--r--. 2 boinc boinc     15095 Jul 27 21:11 start_atlas.sh
[2025-07-28 04:01:30] drwxrwx--x. 2 boinc boinc        68 Jul 27 21:11 shared
[2025-07-28 04:01:30] -rw-r--r--. 2 boinc boinc    542868 Jul 27 21:11 input.tar.gz
[2025-07-28 04:01:30] -rw-r--r--. 1 boinc boinc         0 Jul 27 21:11 boinc_lockfile
[2025-07-28 04:01:30] -rw-r--r--. 1 boinc boinc      2560 Jul 27 21:11 pandaJob.out
[2025-07-28 04:01:30] -rw-------. 1 boinc boinc    980125 Jul 27 21:12 agis_schedconf.cvmfs.json
[2025-07-28 04:01:30] drwx------. 4 boinc boinc      4096 Jul 27 21:12 pilot3
[2025-07-28 04:01:30] -rw-------. 1 boinc boinc 174341729 Jul 28 02:40 HITS.45759028._000085.pool.root.1
[2025-07-28 04:01:30] -rw-r--r--. 1 boinc boinc       531 Jul 28 02:41 boinc_task_state.xml
[2025-07-28 04:01:30] -rw-------. 1 boinc boinc      1014 Jul 28 02:42 memory_monitor_summary.json
[2025-07-28 04:01:30] -rw-------. 1 boinc boinc   1593052 Jul 28 02:42 agis_ddmendpoints.agis.ALL.json
[2025-07-28 04:01:30] -rw-------. 1 boinc boinc    432409 Jul 28 02:42 log.45759028._000085.job.log.tgz.1
[2025-07-28 04:01:30] -rw-------. 1 boinc boinc        95 Jul 28 02:43 pilot_heartbeat.json
[2025-07-28 04:01:30] -rw-------. 1 boinc boinc      7762 Jul 28 02:43 heartbeat.json
[2025-07-28 04:01:30] -rw-------. 1 boinc boinc       889 Jul 28 02:44 pilotlog.txt
[2025-07-28 04:01:30] -rw-------. 1 boinc boinc   1699227 Jul 28 02:44 log.45759028._000085.job.log.1
[2025-07-28 04:01:30] -rw-------. 1 boinc boinc       357 Jul 28 02:44 output.list
[2025-07-28 04:01:30] -rw-r--r--. 1 boinc boinc       620 Jul 28 02:44 runtime_log
[2025-07-28 04:01:30] -rw-------. 1 boinc boinc   2150400 Jul 28 02:44 result.tar.gz
[2025-07-28 04:01:30] -rw-r--r--. 1 boinc boinc      8674 Jul 28 02:44 runtime_log.err
[2025-07-28 04:01:30] -rw-------. 1 boinc boinc       658 Jul 28 02:44 hqRLDmy86z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv4TLDm3PmmPo.diag
[2025-07-28 04:01:30] -rw-r--r--. 1 boinc boinc      8192 Jul 28 04:01 boinc_mmap_file
[2025-07-28 04:01:30] -rw-r--r--. 1 boinc boinc        28 Jul 28 04:01 wrapper_checkpoint.txt
[2025-07-28 04:01:30] -rw-r--r--. 1 boinc boinc     20603 Jul 28 04:01 stderr.txt
[2025-07-28 04:01:31] HITS file was successfully produced:
[2025-07-28 04:01:31] -rw-------. 1 boinc boinc 174341729 Jul 28 02:40 shared/HITS.pool.root.1
[2025-07-28 04:01:31]  *** Contents of shared directory: ***
[2025-07-28 04:01:31] total 403336
[2025-07-28 04:01:31] -rw-r--r--. 2 boinc boinc 235960907 Jul 27 21:11 ATLAS.root_0
[2025-07-28 04:01:31] -rw-r--r--. 2 boinc boinc     15095 Jul 27 21:11 start_atlas.sh
[2025-07-28 04:01:31] -rw-r--r--. 2 boinc boinc    542868 Jul 27 21:11 input.tar.gz
[2025-07-28 04:01:31] -rw-------. 1 boinc boinc 174341729 Jul 28 02:40 HITS.pool.root.1
[2025-07-28 04:01:31] -rw-------. 1 boinc boinc   2150400 Jul 28 02:44 result.tar.gz
04:01:32 (31988): run_atlas exited; CPU time 75943.586145
04:01:32 (31988): called boinc_finish(0)

</stderr_txt>
]]>

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