Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:55:00 (1954887): wrapper (7.7.26015): starting
03:55:00 (1954887): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 03:55:00] Arguments: --nthreads 8
[2025-07-27 03:55:00] Threads: 8
[2025-07-27 03:55:00] Checking for CVMFS
[2025-07-27 03:55:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 03:55:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 03:55:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 03:55:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 03:55:01] 2.13.1.0 87270 7907 199676 148804 1 214 21117600 40960000 17078 16776704 0 21775074 99.820 15810453 36103 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 03:55:01] CVMFS is ok
[2025-07-27 03:55:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 03:55:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 03:55:02] Further information can be found at the LHC@home message board.
[2025-07-27 03:55:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 03:55:02] Checking for apptainer binary...
[2025-07-27 03:55:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 03:55:02] Running /usr/bin/apptainer --version
[2025-07-27 03:55:02] apptainer version 1.4.1-1.el9
[2025-07-27 03:55:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 03:55:03] c-211-33-3.aglt2.org
[2025-07-27 03:55:03] apptainer works
[2025-07-27 03:55:03] Set ATHENA_PROC_NUMBER=8
[2025-07-27 03:55:03] Set ATHENA_CORE_NUMBER=8
[2025-07-27 03:55:03] Starting ATLAS job with PandaID=6745966018
[2025-07-27 03:55:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 06:35:15]  *** The last 200 lines of the pilot log: ***
[2025-07-27 06:35:15] 2025-07-27 10:34:39,484 | INFO     | monitor loop #645: job 0:6745966018 is in state 'finished'
[2025-07-27 06:35:15] 2025-07-27 10:34:39,485 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:35:15] 2025-07-27 10:34:41,990 | INFO     | monitor loop #646: job 0:6745966018 is in state 'finished'
[2025-07-27 06:35:15] 2025-07-27 10:34:41,991 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:35:15] 2025-07-27 10:34:42,484 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 06:35:15] 2025-07-27 10:34:42,499 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2542.9874166666664
[2025-07-27 06:35:15] 2025-07-27 10:34:42,517 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745966018/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 06:35:15] 2025-07-27 10:34:42,518 | INFO     | extracted standard info from prmon json
[2025-07-27 06:35:15] 2025-07-27 10:34:42,519 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 06:35:15] 2025-07-27 10:34:42,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 06:35:15] 2025-07-27 10:34:42,520 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 06:35:15] 2025-07-27 10:34:42,520 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 06:35:15] 2025-07-27 10:34:42,523 | INFO     | fitting pss+swap vs Time
[2025-07-27 06:35:15] 2025-07-27 10:34:42,524 | INFO     | sum of square deviations: 1132713985.0454552
[2025-07-27 06:35:15] 2025-07-27 10:34:42,525 | INFO     | sum of deviations: 17564468656.863636
[2025-07-27 06:35:15] 2025-07-27 10:34:42,525 | INFO     | mean x: 1753607741.2272727
[2025-07-27 06:35:15] 2025-07-27 10:34:42,526 | INFO     | mean y: 2516069.8896103897
[2025-07-27 06:35:15] 2025-07-27 10:34:42,528 | INFO     | -- intersect: -27189863130.74667
[2025-07-27 06:35:15] 2025-07-27 10:34:42,528 | INFO     | intersect: -27189863130.74667
[2025-07-27 06:35:15] 2025-07-27 10:34:42,528 | INFO     | chi2: 1.8207971702298267
[2025-07-27 06:35:15] 2025-07-27 10:34:42,529 | INFO     | sum of square deviations: 1025936382.1610708
[2025-07-27 06:35:15] 2025-07-27 10:34:42,530 | INFO     | sum of deviations: 16971036717.30202
[2025-07-27 06:35:15] 2025-07-27 10:34:42,530 | INFO     | mean x: 1753607588.7181208
[2025-07-27 06:35:15] 2025-07-27 10:34:42,530 | INFO     | mean y: 2515223.22147651
[2025-07-27 06:35:15] 2025-07-27 10:34:42,530 | INFO     | -- intersect: -29005656524.412594
[2025-07-27 06:35:15] 2025-07-27 10:34:42,530 | INFO     | intersect: -29005656524.412594
[2025-07-27 06:35:15] 2025-07-27 10:34:42,530 | INFO     | chi2: 1.8232784587614939
[2025-07-27 06:35:15] 2025-07-27 10:34:42,531 | INFO     | current chi2=1.8232784587614939 (change=-0.1362748455586618 %)
[2025-07-27 06:35:15] 2025-07-27 10:34:42,531 | INFO     | right removable region: 148
[2025-07-27 06:35:15] 2025-07-27 10:34:42,531 | INFO     | sum of square deviations: 1025915029.8120815
[2025-07-27 06:35:15] 2025-07-27 10:34:42,532 | INFO     | sum of deviations: -9274788937.865772
[2025-07-27 06:35:15] 2025-07-27 10:34:42,532 | INFO     | mean x: 1753607893.7516778
[2025-07-27 06:35:15] 2025-07-27 10:34:42,532 | INFO     | mean y: 2553903.463087248
[2025-07-27 06:35:15] 2025-07-27 10:34:42,532 | INFO     | -- intersect: 15856053093.64585
[2025-07-27 06:35:15] 2025-07-27 10:34:42,533 | INFO     | intersect: 15856053093.64585
[2025-07-27 06:35:15] 2025-07-27 10:34:42,533 | INFO     | chi2: 0.13955554003766113
[2025-07-27 06:35:15] 2025-07-27 10:34:42,533 | INFO     | current chi2=0.13955554003766113 (change=92.33547029183673 %)
[2025-07-27 06:35:15] 2025-07-27 10:34:42,533 | INFO     | sum of square deviations: 926046436.8888888
[2025-07-27 06:35:15] 2025-07-27 10:34:42,534 | INFO     | sum of deviations: -5013282981.777779
[2025-07-27 06:35:15] 2025-07-27 10:34:42,535 | INFO     | mean x: 1753608046.2777777
[2025-07-27 06:35:15] 2025-07-27 10:34:42,535 | INFO     | mean y: 2547303.8194444445
[2025-07-27 06:35:15] 2025-07-27 10:34:42,535 | INFO     | -- intersect: 9495951764.882973
[2025-07-27 06:35:15] 2025-07-27 10:34:42,535 | INFO     | intersect: 9495951764.882973
[2025-07-27 06:35:15] 2025-07-27 10:34:42,535 | INFO     | chi2: 0.10489366136357721
[2025-07-27 06:35:15] 2025-07-27 10:34:42,535 | INFO     | current chi2=0.10489366136357721 (change=24.837336206595523 %)
[2025-07-27 06:35:15] 2025-07-27 10:34:42,535 | INFO     | left removable region: 20
[2025-07-27 06:35:15] 2025-07-27 10:34:42,536 | INFO     | sum of square deviations: 650379744.71875
[2025-07-27 06:35:15] 2025-07-27 10:34:42,537 | INFO     | sum of deviations: 2311650387.40625
[2025-07-27 06:35:15] 2025-07-27 10:34:42,537 | INFO     | mean x: 1753608168.296875
[2025-07-27 06:35:15] 2025-07-27 10:34:42,537 | INFO     | mean y: 2534866.515625
[2025-07-27 06:35:15] 2025-07-27 10:34:42,537 | INFO     | -- intersect: -6230329909.05519
[2025-07-27 06:35:15] 2025-07-27 10:34:42,537 | INFO     | intersect: -6230329909.05519
[2025-07-27 06:35:15] 2025-07-27 10:34:42,537 | INFO     | chi2: 0.0006994080204574582
[2025-07-27 06:35:15] 2025-07-27 10:34:42,537 | INFO     | -- intersect: -6230329909.05519
[2025-07-27 06:35:15] 2025-07-27 10:34:42,537 | INFO     | current memory leak: 3.55 B/s (using 128 data points, chi2=0.00)
[2025-07-27 06:35:15] 2025-07-27 10:34:42,538 | INFO     | could have reported an average CPU frequency of 2527 MHz (9 samples)
[2025-07-27 06:35:15] 2025-07-27 10:34:42,538 | INFO     | ..............................
[2025-07-27 06:35:15] 2025-07-27 10:34:42,538 | INFO     | . Timing measurements:
[2025-07-27 06:35:15] 2025-07-27 10:34:42,538 | INFO     | . get job = 0 s
[2025-07-27 06:35:15] 2025-07-27 10:34:42,538 | INFO     | . initial setup = 3 s
[2025-07-27 06:35:15] 2025-07-27 10:34:42,538 | INFO     | . payload setup = 35 s
[2025-07-27 06:35:15] 2025-07-27 10:34:42,539 | INFO     | . stage-in = 0 s
[2025-07-27 06:35:15] 2025-07-27 10:34:42,539 | INFO     | . payload execution = 9415 s
[2025-07-27 06:35:15] 2025-07-27 10:34:42,539 | INFO     | . stage-out = 1 s
[2025-07-27 06:35:15] 2025-07-27 10:34:42,539 | INFO     | . log creation = 0 s
[2025-07-27 06:35:15] 2025-07-27 10:34:42,539 | INFO     | ..............................
[2025-07-27 06:35:15] 2025-07-27 10:34:42,656 | INFO     | 
[2025-07-27 06:35:15] 2025-07-27 10:34:42,657 | INFO     | job summary report
[2025-07-27 06:35:15] 2025-07-27 10:34:42,657 | INFO     | --------------------------------------------------
[2025-07-27 06:35:15] 2025-07-27 10:34:42,657 | INFO     | PanDA job id: 6745966018
[2025-07-27 06:35:15] 2025-07-27 10:34:42,657 | INFO     | task id: 45758307
[2025-07-27 06:35:15] 2025-07-27 10:34:42,657 | INFO     | errors: (none)
[2025-07-27 06:35:15] 2025-07-27 10:34:42,657 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 06:35:15] 2025-07-27 10:34:42,657 | INFO     | pilot state: finished 
[2025-07-27 06:35:15] 2025-07-27 10:34:42,657 | INFO     | transexitcode: 0
[2025-07-27 06:35:15] 2025-07-27 10:34:42,657 | INFO     | exeerrorcode: 0
[2025-07-27 06:35:15] 2025-07-27 10:34:42,657 | INFO     | exeerrordiag: 
[2025-07-27 06:35:15] 2025-07-27 10:34:42,657 | INFO     | exitcode: 0
[2025-07-27 06:35:15] 2025-07-27 10:34:42,658 | INFO     | exitmsg: OK
[2025-07-27 06:35:15] 2025-07-27 10:34:42,658 | INFO     | cpuconsumptiontime: 55265 s
[2025-07-27 06:35:15] 2025-07-27 10:34:42,658 | INFO     | nevents: 400
[2025-07-27 06:35:15] 2025-07-27 10:34:42,658 | INFO     | neventsw: 0
[2025-07-27 06:35:15] 2025-07-27 10:34:42,658 | INFO     | pid: 1972953
[2025-07-27 06:35:15] 2025-07-27 10:34:42,658 | INFO     | pgrp: 1972953
[2025-07-27 06:35:15] 2025-07-27 10:34:42,658 | INFO     | corecount: 8
[2025-07-27 06:35:15] 2025-07-27 10:34:42,658 | INFO     | event service: False
[2025-07-27 06:35:15] 2025-07-27 10:34:42,658 | INFO     | sizes: {0: 2397279, 1: 2397307, 2: 2397478, 12: 2397506, 23: 2397534, 28: 2397824, 34: 2397980, 9455: 2426512, 9456: 2426511, 9458: 2435565, 9459: 2435621, 9470: 2
[2025-07-27 06:35:15] 2025-07-27 10:34:42,658 | INFO     | --------------------------------------------------
[2025-07-27 06:35:15] 2025-07-27 10:34:42,658 | INFO     | 
[2025-07-27 06:35:15] 2025-07-27 10:34:42,659 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 06:35:15] 2025-07-27 10:34:42,693 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,693 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,693 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,693 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,694 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,694 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,694 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,694 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,694 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,694 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,694 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 06:35:15] 2025-07-27 10:34:42,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,695 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 06:35:15] 2025-07-27 10:34:42,695 | INFO     | job 6745966018 has completed (purged errors)
[2025-07-27 06:35:15] 2025-07-27 10:34:42,695 | INFO     | overall cleanup function is called
[2025-07-27 06:35:15] 2025-07-27 10:34:43,704 | INFO     | --- collectZombieJob: --- 10, [1972953]
[2025-07-27 06:35:15] 2025-07-27 10:34:43,704 | INFO     | zombie collector waiting for pid 1972953
[2025-07-27 06:35:15] 2025-07-27 10:34:43,705 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 06:35:15] 2025-07-27 10:34:43,705 | INFO     | collected zombie processes
[2025-07-27 06:35:15] 2025-07-27 10:34:43,705 | INFO     | will attempt to kill all subprocesses of pid=1972953
[2025-07-27 06:35:15] 2025-07-27 10:34:44,068 | INFO     | process IDs to be killed: [1972953] (in reverse order)
[2025-07-27 06:35:15] 2025-07-27 10:34:44,207 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 06:35:15] 2025-07-27 10:34:44,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 06:35:15] 2025-07-27 10:34:44,223 | INFO     | did not find any defunct processes belonging to 1972953
[2025-07-27 06:35:15] 2025-07-27 10:34:44,236 | INFO     | did not find any defunct processes belonging to 1972953
[2025-07-27 06:35:15] 2025-07-27 10:34:44,237 | INFO     | ready for new job
[2025-07-27 06:35:15] 2025-07-27 10:34:44,237 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 06:35:15] 2025-07-27 10:34:44,239 | INFO     | ***************************************
[2025-07-27 06:35:15] 2025-07-27 10:34:44,240 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 06:35:15] 2025-07-27 10:34:44,240 | INFO     | ***************************************
[2025-07-27 06:35:15] 2025-07-27 10:34:44,240 | INFO     | 
[2025-07-27 06:35:15] 2025-07-27 10:34:44,246 | INFO     | architecture information:
[2025-07-27 06:35:15] 2025-07-27 10:34:44,247 | INFO     | executing command: cat /etc/os-release
[2025-07-27 06:35:15] 2025-07-27 10:34:44,266 | INFO     | cat /etc/os-release:
[2025-07-27 06:35:15] NAME="CentOS Linux"
[2025-07-27 06:35:15] VERSION="7 (Core)"
[2025-07-27 06:35:15] ID="centos"
[2025-07-27 06:35:15] ID_LIKE="rhel fedora"
[2025-07-27 06:35:15] VERSION_ID="7"
[2025-07-27 06:35:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 06:35:15] ANSI_COLOR="0;31"
[2025-07-27 06:35:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 06:35:15] HOME_URL="https://www.centos.org/"
[2025-07-27 06:35:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 06:35:15] 
[2025-07-27 06:35:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 06:35:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 06:35:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 06:35:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 06:35:15] 
[2025-07-27 06:35:15] 2025-07-27 10:34:44,267 | INFO     | ***************************************
[2025-07-27 06:35:15] 2025-07-27 10:34:44,770 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 06:35:15] 2025-07-27 10:34:44,856 | INFO     | sufficient remaining disk space (128836435968 B)
[2025-07-27 06:35:15] 2025-07-27 10:34:44,856 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 06:35:15] 2025-07-27 10:34:44,856 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 06:35:15] 2025-07-27 10:34:44,856 | INFO     | update_server=False
[2025-07-27 06:35:15] 2025-07-27 10:34:44,856 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 06:35:15] 2025-07-27 10:34:44,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 06:35:15] 2025-07-27 10:34:45,228 | INFO     | all payload control threads have been joined
[2025-07-27 06:35:15] 2025-07-27 10:34:45,490 | INFO     | all data control threads have been joined
[2025-07-27 06:35:15] 2025-07-27 10:34:45,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:35:15] 2025-07-27 10:34:45,505 | INFO     | aborting loop
[2025-07-27 06:35:15] 2025-07-27 10:34:45,774 | INFO     | all job control threads have been joined
[2025-07-27 06:35:15] 2025-07-27 10:34:45,862 | INFO     | [job] retrieve thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:46,095 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:46,234 | INFO     | [payload] control thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:46,252 | INFO     | [data] copytool_in thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:46,297 | INFO     | [job] validate thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:46,386 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:46,413 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:46,496 | INFO     | [data] control thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:46,511 | INFO     | [job] job monitor thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:46,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 06:35:15] 2025-07-27 10:34:46,738 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:46,780 | INFO     | [job] control thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:46,864 | INFO     | [data] copytool_out thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:47,146 | INFO     | [payload] failed_post thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:47,455 | INFO     | [payload] validate_post thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:47,677 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:35:15] 2025-07-27 10:34:48,683 | INFO     | [job] queue monitor thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:50,743 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 06:35:15] 2025-07-27 10:34:52,206 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140474724747072)>', '<ExcThread(monitor, started 140474153170688)>']
[2025-07-27 06:35:15] 2025-07-27 10:34:57,232 | INFO     | all workflow threads have been joined
[2025-07-27 06:35:15] 2025-07-27 10:34:57,232 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 06:35:15] 2025-07-27 10:34:57,233 | INFO     | traces error code: 0
[2025-07-27 06:35:15] 2025-07-27 10:34:57,233 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 06:35:15] 2025-07-27 10:35:15,203 | INFO     | PID=1966186 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 06:35:15] 2025-07-27 10:35:15,203 | INFO     | .. there are 15 such processes running
[2025-07-27 06:35:15] 2025-07-27 10:35:15,204 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 06:35:15] 2025-07-27 10:35:15,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 06:35:15] 2025-07-27 10:35:15,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 06:35:15] 2025-07-27 10:35:15,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 06:35:15] 2025-07-27 10:35:15,204 | INFO     | [monitor] control thread has ended
[2025-07-27 06:35:15] 2025-07-27 10:35:15,468 [wrapper] ==== pilot stdout END ====
[2025-07-27 06:35:15] 2025-07-27 10:35:15,483 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 06:35:15] 2025-07-27 10:35:15,492 [wrapper] pilotpid: 1966186
[2025-07-27 06:35:15] 2025-07-27 10:35:15,497 [wrapper] Pilot exit status: 0
[2025-07-27 06:35:15] 2025-07-27 10:35:15,533 [wrapper] pandaids: 6745966018
[2025-07-27 06:35:15] 2025-07-27 10:35:15,642 [wrapper] cleanup supervisor_pilot 2227314 1966187
[2025-07-27 06:35:15] 2025-07-27 10:35:15,651 [wrapper] Test setup, not cleaning
[2025-07-27 06:35:15] 2025-07-27 10:35:15,656 [wrapper] apfmon messages muted
[2025-07-27 06:35:15] 2025-07-27 10:35:15,659 [wrapper] ==== wrapper stdout END ====
[2025-07-27 06:35:15] 2025-07-27 10:35:15,662 [wrapper] ==== wrapper stderr END ====
[2025-07-27 06:35:15]  *** Error codes and diagnostics ***
[2025-07-27 06:35:15]     "exeErrorCode": 0,
[2025-07-27 06:35:15]     "exeErrorDiag": "",
[2025-07-27 06:35:15]     "pilotErrorCode": 0,
[2025-07-27 06:35:15]     "pilotErrorDiag": "",
[2025-07-27 06:35:15]  *** Listing of results directory ***
[2025-07-27 06:35:15] total 418016
[2025-07-27 06:35:15] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 22:22 pilot3.tar.gz
[2025-07-27 06:35:15] -rwx------. 1 boincer umatlas     36292 Jul 26 22:37 runpilot2-wrapper.sh
[2025-07-27 06:35:15] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 22:37 queuedata.json
[2025-07-27 06:35:15] -rw-r--r--. 1 boincer umatlas       100 Jul 27 03:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 06:35:15] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 03:54 run_atlas
[2025-07-27 06:35:15] -rw-r--r--. 1 boincer umatlas       105 Jul 27 03:54 job.xml
[2025-07-27 06:35:15] -rw-r--r--. 2 boincer umatlas 241357925 Jul 27 03:55 EVNT.45758305._000005.pool.root.1
[2025-07-27 06:35:15] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 03:55 start_atlas.sh
[2025-07-27 06:35:15] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 03:55 shared
[2025-07-27 06:35:15] -rw-r--r--. 2 boincer umatlas    542859 Jul 27 03:55 input.tar.gz
[2025-07-27 06:35:15] -rw-r--r--. 1 boincer umatlas         0 Jul 27 03:55 boinc_lockfile
[2025-07-27 06:35:15] -rw-r--r--. 1 boincer umatlas      2544 Jul 27 03:55 pandaJob.out
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas    980125 Jul 27 03:55 agis_schedconf.cvmfs.json
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas   1593052 Jul 27 03:55 agis_ddmendpoints.agis.ALL.json
[2025-07-27 06:35:15] drwx------. 4 boincer umatlas      4096 Jul 27 03:55 pilot3
[2025-07-27 06:35:15] -rw-r--r--. 1 boincer umatlas      6857 Jul 27 06:27 init_data.xml
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas 180435532 Jul 27 06:33 HITS.45758307._000101.pool.root.1
[2025-07-27 06:35:15] -rw-r--r--. 1 boincer umatlas       529 Jul 27 06:34 boinc_task_state.xml
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas      1056 Jul 27 06:34 memory_monitor_summary.json
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas    338576 Jul 27 06:34 log.45758307._000101.job.log.tgz.1
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas        95 Jul 27 06:34 pilot_heartbeat.json
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas      7811 Jul 27 06:34 heartbeat.json
[2025-07-27 06:35:15] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 06:35 boinc_mmap_file
[2025-07-27 06:35:15] -rw-r--r--. 1 boincer umatlas        27 Jul 27 06:35 wrapper_checkpoint.txt
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas       823 Jul 27 06:35 pilotlog.txt
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas    848680 Jul 27 06:35 log.45758307._000101.job.log.1
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas       357 Jul 27 06:35 output.list
[2025-07-27 06:35:15] -rw-r--r--. 1 boincer umatlas       620 Jul 27 06:35 runtime_log
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas   1208320 Jul 27 06:35 result.tar.gz
[2025-07-27 06:35:15] -rw-r--r--. 1 boincer umatlas      8670 Jul 27 06:35 runtime_log.err
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas       655 Jul 27 06:35 736NDmpR6z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTyTLDmZ4T6Zn.diag
[2025-07-27 06:35:15] -rw-r--r--. 1 boincer umatlas     21291 Jul 27 06:35 stderr.txt
[2025-07-27 06:35:15] HITS file was successfully produced:
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas 180435532 Jul 27 06:33 shared/HITS.pool.root.1
[2025-07-27 06:35:15]  *** Contents of shared directory: ***
[2025-07-27 06:35:15] total 413648
[2025-07-27 06:35:15] -rw-r--r--. 2 boincer umatlas 241357925 Jul 27 03:55 ATLAS.root_0
[2025-07-27 06:35:15] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 03:55 start_atlas.sh
[2025-07-27 06:35:15] -rw-r--r--. 2 boincer umatlas    542859 Jul 27 03:55 input.tar.gz
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas 180435532 Jul 27 06:33 HITS.pool.root.1
[2025-07-27 06:35:15] -rw-------. 1 boincer umatlas   1208320 Jul 27 06:35 result.tar.gz
06:35:17 (1954887): run_atlas exited; CPU time 55605.206475
06:35:17 (1954887): called boinc_finish(0)

</stderr_txt>
]]>

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