Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:29:29 (2816567): wrapper (7.7.26015): starting
05:29:29 (2816567): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 05:29:29] Arguments: --nthreads 12
[2025-07-27 05:29:29] Threads: 12
[2025-07-27 05:29:29] Checking for CVMFS
[2025-07-27 05:29:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 05:29:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 05:29:29] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 05:29:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 05:29:29] 2.13.0.0 1395644 18185 288392 148807 0 397 31711384 32935936 6612 16776704 1 41944549 99.634 77389343 26831 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 05:29:29] CVMFS is ok
[2025-07-27 05:29:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 05:29:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 05:29:29] Further information can be found at the LHC@home message board.
[2025-07-27 05:29:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 05:29:29] Checking for apptainer binary...
[2025-07-27 05:29:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 05:29:29] Running /usr/bin/apptainer --version
[2025-07-27 05:29:29] apptainer version 1.4.1-1.el9
[2025-07-27 05:29:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 05:29:29] c6-6-39-2.aglt2.org
[2025-07-27 05:29:29] apptainer works
[2025-07-27 05:29:30] Set ATHENA_PROC_NUMBER=12
[2025-07-27 05:29:30] Set ATHENA_CORE_NUMBER=12
[2025-07-27 05:29:30] Starting ATLAS job with PandaID=6745902233
[2025-07-27 05:29:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 07:08:20]  *** The last 200 lines of the pilot log: ***
[2025-07-27 07:08:20]  is_altstaged=None
[2025-07-27 07:08:20]  is_tar=False
[2025-07-27 07:08:20]  lfn=log.45758861._000099.job.log.tgz.1
[2025-07-27 07:08:20]  mtime=0
[2025-07-27 07:08:20]  protocol_id=None
[2025-07-27 07:08:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 07:08:20]  replicas=None
[2025-07-27 07:08:20]  scope=mc23_13p6TeV
[2025-07-27 07:08:20]  status=None
[2025-07-27 07:08:20]  status_code=0
[2025-07-27 07:08:20]  storage_token=
[2025-07-27 07:08:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745902233/log.45758861._000099.job.log.tgz.1
[2025-07-27 07:08:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/fb/log.45758861._000099.job.log.tgz.1
[2025-07-27 07:08:20]  workdir=None
[2025-07-27 07:08:20] ]
[2025-07-27 07:08:20] 2025-07-27 11:07:41,347 | INFO     | transferring file log.45758861._000099.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745902233/log.45758861._000099.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 07:08:20] 2025-07-27 11:07:41,348 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745902233/log.45758861._000099.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758861._000099.job
[2025-07-27 07:08:20] 2025-07-27 11:07:41,374 | INFO     | adding to output.list: log.45758861._000099.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/fb/log.45758861._000099.job.log.tg
[2025-07-27 07:08:20] 2025-07-27 11:07:41,376 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 07:08:20] 2025-07-27 11:07:41,376 | INFO     | summary of transferred files:
[2025-07-27 07:08:20] 2025-07-27 11:07:41,376 | INFO     |  -- lfn=log.45758861._000099.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 07:08:20] 2025-07-27 11:07:41,377 | INFO     | stage-out finished correctly
[2025-07-27 07:08:20] 2025-07-27 11:07:41,507 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 07:08:20] 2025-07-27 11:07:41,924 | INFO     | job 6745902233 has state=finished
[2025-07-27 07:08:20] 2025-07-27 11:07:41,924 | INFO     | preparing for final server update for job 6745902233 in state='finished'
[2025-07-27 07:08:20] 2025-07-27 11:07:42,002 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 07:08:20] 2025-07-27 11:07:42,003 | INFO     | this job has now completed (state=finished)
[2025-07-27 07:08:20] 2025-07-27 11:07:42,004 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 07:08:20] 2025-07-27 11:07:42,004 | INFO     | log transfer has been attempted: DONE
[2025-07-27 07:08:20] 2025-07-27 11:07:42,004 | INFO     | job 6745902233 has finished - writing final server update
[2025-07-27 07:08:20] 2025-07-27 11:07:42,004 | INFO     | total number of processed events: 400 (read)
[2025-07-27 07:08:20] 2025-07-27 11:07:42,005 | INFO     | executing command: lscpu
[2025-07-27 07:08:20] 2025-07-27 11:07:42,081 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 07:08:20] 2025-07-27 11:07:43,355 | INFO     | monitor loop #426: job 0:6745902233 is in state 'finished'
[2025-07-27 07:08:20] 2025-07-27 11:07:43,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:08:20] 2025-07-27 11:07:45,860 | INFO     | monitor loop #427: job 0:6745902233 is in state 'finished'
[2025-07-27 07:08:20] 2025-07-27 11:07:45,860 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 07:08:20] 2025-07-27 11:07:48,154 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 07:08:20] 2025-07-27 11:07:48,157 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2564.623821428572
[2025-07-27 07:08:20] 2025-07-27 11:07:48,166 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745902233/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 07:08:20] 2025-07-27 11:07:48,167 | INFO     | extracted standard info from prmon json
[2025-07-27 07:08:20] 2025-07-27 11:07:48,167 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 07:08:20] 2025-07-27 11:07:48,167 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 07:08:20] 2025-07-27 11:07:48,168 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 07:08:20] 2025-07-27 11:07:48,168 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 07:08:20] 2025-07-27 11:07:48,170 | INFO     | fitting pss+swap vs Time
[2025-07-27 07:08:20] 2025-07-27 11:07:48,171 | INFO     | sum of square deviations: 218576054.98876375
[2025-07-27 07:08:20] 2025-07-27 11:07:48,171 | INFO     | sum of deviations: -20584480756.887646
[2025-07-27 07:08:20] 2025-07-27 11:07:48,171 | INFO     | mean x: 1753611594.011236
[2025-07-27 07:08:20] 2025-07-27 11:07:48,171 | INFO     | mean y: 2530030.887640449
[2025-07-27 07:08:20] 2025-07-27 11:07:48,171 | INFO     | -- intersect: 165149549972.45895
[2025-07-27 07:08:20] 2025-07-27 11:07:48,171 | INFO     | intersect: 165149549972.45895
[2025-07-27 07:08:20] 2025-07-27 11:07:48,171 | INFO     | chi2: 0.19167572776488914
[2025-07-27 07:08:20] 2025-07-27 11:07:48,172 | INFO     | -- intersect: 165149549972.45895
[2025-07-27 07:08:20] 2025-07-27 11:07:48,172 | INFO     | current memory leak: -94.18 B/s (using 89 data points, chi2=0.19)
[2025-07-27 07:08:20] 2025-07-27 11:07:48,172 | INFO     | could have reported an average CPU frequency of 2583 MHz (7 samples)
[2025-07-27 07:08:20] 2025-07-27 11:07:48,172 | INFO     | ..............................
[2025-07-27 07:08:20] 2025-07-27 11:07:48,172 | INFO     | . Timing measurements:
[2025-07-27 07:08:20] 2025-07-27 11:07:48,172 | INFO     | . get job = 0 s
[2025-07-27 07:08:20] 2025-07-27 11:07:48,173 | INFO     | . initial setup = 2 s
[2025-07-27 07:08:20] 2025-07-27 11:07:48,173 | INFO     | . payload setup = 6 s
[2025-07-27 07:08:20] 2025-07-27 11:07:48,173 | INFO     | . stage-in = 0 s
[2025-07-27 07:08:20] 2025-07-27 11:07:48,173 | INFO     | . payload execution = 5855 s
[2025-07-27 07:08:20] 2025-07-27 11:07:48,173 | INFO     | . stage-out = 0 s
[2025-07-27 07:08:20] 2025-07-27 11:07:48,173 | INFO     | . log creation = 0 s
[2025-07-27 07:08:20] 2025-07-27 11:07:48,173 | INFO     | ..............................
[2025-07-27 07:08:20] 2025-07-27 11:07:48,258 | INFO     | 
[2025-07-27 07:08:20] 2025-07-27 11:07:48,258 | INFO     | job summary report
[2025-07-27 07:08:20] 2025-07-27 11:07:48,258 | INFO     | --------------------------------------------------
[2025-07-27 07:08:20] 2025-07-27 11:07:48,258 | INFO     | PanDA job id: 6745902233
[2025-07-27 07:08:20] 2025-07-27 11:07:48,258 | INFO     | task id: 45758861
[2025-07-27 07:08:20] 2025-07-27 11:07:48,258 | INFO     | errors: (none)
[2025-07-27 07:08:20] 2025-07-27 11:07:48,258 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 07:08:20] 2025-07-27 11:07:48,258 | INFO     | pilot state: finished 
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | transexitcode: 0
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | exeerrorcode: 0
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | exeerrordiag: 
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | exitcode: 0
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | exitmsg: OK
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | cpuconsumptiontime: 58255 s
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | nevents: 400
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | neventsw: 0
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | pid: 2828784
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | pgrp: 2828784
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | corecount: 12
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | event service: False
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | sizes: {0: 2397481, 4: 2397743, 11: 2397771, 5865: 2424526, 5867: 2433580, 5873: 2433718}
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | --------------------------------------------------
[2025-07-27 07:08:20] 2025-07-27 11:07:48,259 | INFO     | 
[2025-07-27 07:08:20] 2025-07-27 11:07:48,260 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 07:08:20] 2025-07-27 11:07:48,287 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,287 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,288 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,288 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,288 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,288 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,288 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,288 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,288 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,288 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,288 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,288 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,288 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,288 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,289 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,289 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,289 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,289 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 07:08:20] 2025-07-27 11:07:48,289 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,289 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 07:08:20] 2025-07-27 11:07:48,289 | INFO     | job 6745902233 has completed (purged errors)
[2025-07-27 07:08:20] 2025-07-27 11:07:48,289 | INFO     | overall cleanup function is called
[2025-07-27 07:08:20] 2025-07-27 11:07:49,298 | INFO     | --- collectZombieJob: --- 10, [2828784]
[2025-07-27 07:08:20] 2025-07-27 11:07:49,298 | INFO     | zombie collector waiting for pid 2828784
[2025-07-27 07:08:20] 2025-07-27 11:07:49,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 07:08:20] 2025-07-27 11:07:49,298 | INFO     | collected zombie processes
[2025-07-27 07:08:20] 2025-07-27 11:07:49,298 | INFO     | will attempt to kill all subprocesses of pid=2828784
[2025-07-27 07:08:20] 2025-07-27 11:07:49,620 | INFO     | process IDs to be killed: [2828784] (in reverse order)
[2025-07-27 07:08:20] 2025-07-27 11:07:49,758 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 07:08:20] 2025-07-27 11:07:49,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 07:08:20] 2025-07-27 11:07:49,776 | INFO     | did not find any defunct processes belonging to 2828784
[2025-07-27 07:08:20] 2025-07-27 11:07:49,793 | INFO     | did not find any defunct processes belonging to 2828784
[2025-07-27 07:08:20] 2025-07-27 11:07:49,793 | INFO     | ready for new job
[2025-07-27 07:08:20] 2025-07-27 11:07:49,793 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 07:08:20] 2025-07-27 11:07:49,796 | INFO     | ***************************************
[2025-07-27 07:08:20] 2025-07-27 11:07:49,796 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 07:08:20] 2025-07-27 11:07:49,797 | INFO     | ***************************************
[2025-07-27 07:08:20] 2025-07-27 11:07:49,797 | INFO     | 
[2025-07-27 07:08:20] 2025-07-27 11:07:49,813 | INFO     | architecture information:
[2025-07-27 07:08:20] 2025-07-27 11:07:49,813 | INFO     | executing command: cat /etc/os-release
[2025-07-27 07:08:20] 2025-07-27 11:07:49,836 | INFO     | cat /etc/os-release:
[2025-07-27 07:08:20] NAME="CentOS Linux"
[2025-07-27 07:08:20] VERSION="7 (Core)"
[2025-07-27 07:08:20] ID="centos"
[2025-07-27 07:08:20] ID_LIKE="rhel fedora"
[2025-07-27 07:08:20] VERSION_ID="7"
[2025-07-27 07:08:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 07:08:20] ANSI_COLOR="0;31"
[2025-07-27 07:08:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 07:08:20] HOME_URL="https://www.centos.org/"
[2025-07-27 07:08:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 07:08:20] 
[2025-07-27 07:08:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 07:08:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 07:08:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 07:08:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 07:08:20] 
[2025-07-27 07:08:20] 2025-07-27 11:07:49,837 | INFO     | ***************************************
[2025-07-27 07:08:20] 2025-07-27 11:07:50,340 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 07:08:20] 2025-07-27 11:07:50,361 | INFO     | sufficient remaining disk space (73862742016 B)
[2025-07-27 07:08:20] 2025-07-27 11:07:50,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 07:08:20] 2025-07-27 11:07:50,362 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 07:08:20] 2025-07-27 11:07:50,362 | INFO     | update_server=False
[2025-07-27 07:08:20] 2025-07-27 11:07:50,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 07:08:20] 2025-07-27 11:07:50,362 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 07:08:20] 2025-07-27 11:07:50,362 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 07:08:20] 2025-07-27 11:07:50,363 | INFO     | aborting loop
[2025-07-27 07:08:20] 2025-07-27 11:07:50,665 | INFO     | all data control threads have been joined
[2025-07-27 07:08:20] 2025-07-27 11:07:51,006 | INFO     | all job control threads have been joined
[2025-07-27 07:08:20] 2025-07-27 11:07:51,367 | INFO     | [job] retrieve thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:51,367 | INFO     | [job] job monitor thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:51,586 | INFO     | all payload control threads have been joined
[2025-07-27 07:08:20] 2025-07-27 11:07:51,670 | INFO     | [data] control thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:51,999 | INFO     | [payload] failed_post thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:52,012 | INFO     | [job] control thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:52,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 07:08:20] 2025-07-27 11:07:52,150 | INFO     | [payload] validate_post thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:52,369 | INFO     | [data] copytool_out thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:52,393 | INFO     | [data] copytool_in thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:52,466 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:52,468 | INFO     | [job] validate thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:52,591 | INFO     | [payload] control thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:52,598 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:52,707 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:52,721 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:53,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 07:08:20] 2025-07-27 11:07:54,274 | INFO     | [job] queue monitor thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:56,117 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 07:08:20] 2025-07-27 11:07:56,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574655428416)>', '<ExcThread(monitor, started 140574296348416)>']
[2025-07-27 07:08:20] 2025-07-27 11:08:01,634 | INFO     | all workflow threads have been joined
[2025-07-27 07:08:20] 2025-07-27 11:08:01,634 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 07:08:20] 2025-07-27 11:08:01,634 | INFO     | traces error code: 0
[2025-07-27 07:08:20] 2025-07-27 11:08:01,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 07:08:20] 2025-07-27 11:08:20,489 | INFO     | PID=2820552 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 07:08:20] 2025-07-27 11:08:20,490 | INFO     | .. there are 11 such processes running
[2025-07-27 07:08:20] 2025-07-27 11:08:20,490 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 07:08:20] 2025-07-27 11:08:20,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 07:08:20] 2025-07-27 11:08:20,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 07:08:20] 2025-07-27 11:08:20,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 07:08:20] 2025-07-27 11:08:20,490 | INFO     | [monitor] control thread has ended
[2025-07-27 07:08:20] 2025-07-27 11:08:20,719 [wrapper] ==== pilot stdout END ====
[2025-07-27 07:08:20] 2025-07-27 11:08:20,723 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 07:08:20] 2025-07-27 11:08:20,729 [wrapper] pilotpid: 2820552
[2025-07-27 07:08:20] 2025-07-27 11:08:20,734 [wrapper] Pilot exit status: 0
[2025-07-27 07:08:20] 2025-07-27 11:08:20,750 [wrapper] pandaids: 6745902233
[2025-07-27 07:08:20] 2025-07-27 11:08:20,824 [wrapper] cleanup supervisor_pilot 3214479 2820553
[2025-07-27 07:08:20] 2025-07-27 11:08:20,828 [wrapper] Test setup, not cleaning
[2025-07-27 07:08:20] 2025-07-27 11:08:20,832 [wrapper] apfmon messages muted
[2025-07-27 07:08:20] 2025-07-27 11:08:20,836 [wrapper] ==== wrapper stdout END ====
[2025-07-27 07:08:20] 2025-07-27 11:08:20,842 [wrapper] ==== wrapper stderr END ====
[2025-07-27 07:08:20]  *** Error codes and diagnostics ***
[2025-07-27 07:08:20]     "exeErrorCode": 0,
[2025-07-27 07:08:20]     "exeErrorDiag": "",
[2025-07-27 07:08:20]     "pilotErrorCode": 0,
[2025-07-27 07:08:20]     "pilotErrorDiag": "",
[2025-07-27 07:08:20]  *** Listing of results directory ***
[2025-07-27 07:08:20] total 411012
[2025-07-27 07:08:20] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 19:57 queuedata.json
[2025-07-27 07:08:20] -rwx------. 1 boincer umatlas     36292 Jul 26 19:58 runpilot2-wrapper.sh
[2025-07-27 07:08:20] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 19:58 pilot3.tar.gz
[2025-07-27 07:08:20] -rw-r--r--. 1 boincer umatlas       100 Jul 27 05:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 07:08:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 05:29 run_atlas
[2025-07-27 07:08:20] -rw-r--r--. 1 boincer umatlas       105 Jul 27 05:29 job.xml
[2025-07-27 07:08:20] -rw-r--r--. 2 boincer umatlas 238836630 Jul 27 05:29 EVNT.45758859._000004.pool.root.1
[2025-07-27 07:08:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 05:29 start_atlas.sh
[2025-07-27 07:08:20] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 05:29 shared
[2025-07-27 07:08:20] -rw-r--r--. 2 boincer umatlas    542882 Jul 27 05:29 input.tar.gz
[2025-07-27 07:08:20] -rw-r--r--. 1 boincer umatlas         0 Jul 27 05:29 boinc_lockfile
[2025-07-27 07:08:20] -rw-r--r--. 1 boincer umatlas      2574 Jul 27 05:29 pandaJob.out
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas    980125 Jul 27 05:29 agis_schedconf.cvmfs.json
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas   1593052 Jul 27 05:29 agis_ddmendpoints.agis.ALL.json
[2025-07-27 07:08:20] drwx------. 4 boincer umatlas      4096 Jul 27 05:29 pilot3
[2025-07-27 07:08:20] -rw-r--r--. 1 boincer umatlas      6840 Jul 27 07:02 init_data.xml
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas 176212501 Jul 27 07:07 HITS.45758861._000099.pool.root.1
[2025-07-27 07:08:20] -rw-r--r--. 1 boincer umatlas       530 Jul 27 07:07 boinc_task_state.xml
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas        95 Jul 27 07:07 pilot_heartbeat.json
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas      1038 Jul 27 07:07 memory_monitor_summary.json
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas    409794 Jul 27 07:07 log.45758861._000099.job.log.tgz.1
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas      7812 Jul 27 07:07 heartbeat.json
[2025-07-27 07:08:20] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 07:07 boinc_mmap_file
[2025-07-27 07:08:20] -rw-r--r--. 1 boincer umatlas        27 Jul 27 07:07 wrapper_checkpoint.txt
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas       823 Jul 27 07:08 pilotlog.txt
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas    565346 Jul 27 07:08 log.45758861._000099.job.log.1
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas       357 Jul 27 07:08 output.list
[2025-07-27 07:08:20] -rw-r--r--. 1 boincer umatlas       620 Jul 27 07:08 runtime_log
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas    993280 Jul 27 07:08 result.tar.gz
[2025-07-27 07:08:20] -rw-r--r--. 1 boincer umatlas      8667 Jul 27 07:08 runtime_log.err
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas       656 Jul 27 07:08 Fg7KDmqx3z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZZTLDmhqOSXo.diag
[2025-07-27 07:08:20] -rw-r--r--. 1 boincer umatlas     21504 Jul 27 07:08 stderr.txt
[2025-07-27 07:08:20] HITS file was successfully produced:
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas 176212501 Jul 27 07:07 shared/HITS.pool.root.1
[2025-07-27 07:08:20]  *** Contents of shared directory: ***
[2025-07-27 07:08:20] total 406848
[2025-07-27 07:08:20] -rw-r--r--. 2 boincer umatlas 238836630 Jul 27 05:29 ATLAS.root_0
[2025-07-27 07:08:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 05:29 start_atlas.sh
[2025-07-27 07:08:20] -rw-r--r--. 2 boincer umatlas    542882 Jul 27 05:29 input.tar.gz
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas 176212501 Jul 27 07:07 HITS.pool.root.1
[2025-07-27 07:08:20] -rw-------. 1 boincer umatlas    993280 Jul 27 07:08 result.tar.gz
07:08:22 (2816567): run_atlas exited; CPU time 58296.128989
07:08:22 (2816567): called boinc_finish(0)

</stderr_txt>
]]>

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