Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:30:25 (2791386): wrapper (7.7.26015): starting
20:30:25 (2791386): wrapper: running run_atlas (--nthreads 3)
[2025-07-27 20:30:25] Arguments: --nthreads 3
[2025-07-27 20:30:25] Threads: 3
[2025-07-27 20:30:25] Checking for CVMFS
[2025-07-27 20:30:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:30:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:30:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:30:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:30:25] 2.9.2.0 3849249 8479 86100 148821 0 56 35458353 36864001 0 130560 0 5699892 99.986 316441 2761 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 20:30:25] CVMFS is ok
[2025-07-27 20:30:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:30:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:30:25] Further information can be found at the LHC@home message board.
[2025-07-27 20:30:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:30:25] Checking for apptainer binary...
[2025-07-27 20:30:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:30:25] Running /usr/bin/apptainer --version
[2025-07-27 20:30:25] apptainer version 1.3.6-6.1
[2025-07-27 20:30:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:30:25] atlasA223b
[2025-07-27 20:30:25] apptainer works
[2025-07-27 20:30:25] Set ATHENA_PROC_NUMBER=3
[2025-07-27 20:30:25] Set ATHENA_CORE_NUMBER=3
[2025-07-27 20:30:25] Starting ATLAS job with PandaID=6746125800
[2025-07-27 20:30:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:25:18]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:25:18] 2025-07-27 20:24:42,558 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 22:25:18] 2025-07-27 20:24:43,835 | INFO     | monitor loop #525: job 0:6746125800 is in state 'finished'
[2025-07-27 22:25:18] 2025-07-27 20:24:43,835 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:25:18] 2025-07-27 20:24:46,338 | INFO     | monitor loop #526: job 0:6746125800 is in state 'finished'
[2025-07-27 22:25:18] 2025-07-27 20:24:46,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:25:18] 2025-07-27 20:24:46,579 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 22:25:18] 2025-07-27 20:24:46,580 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3779.773333333334
[2025-07-27 22:25:18] 2025-07-27 20:24:46,581 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6746125800/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:25:18] 2025-07-27 20:24:46,581 | INFO     | extracted standard info from prmon json
[2025-07-27 22:25:18] 2025-07-27 20:24:46,581 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:25:18] 2025-07-27 20:24:46,581 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:25:18] 2025-07-27 20:24:46,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:25:18] 2025-07-27 20:24:46,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:25:18] 2025-07-27 20:24:46,582 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:25:18] 2025-07-27 20:24:46,582 | INFO     | sum of square deviations: 435610028.0
[2025-07-27 22:25:18] 2025-07-27 20:24:46,582 | INFO     | sum of deviations: -17313402043.0
[2025-07-27 22:25:18] 2025-07-27 20:24:46,582 | INFO     | mean x: 1753644437.5
[2025-07-27 22:25:18] 2025-07-27 20:24:46,582 | INFO     | mean y: 2460936.1785714286
[2025-07-27 22:25:18] 2025-07-27 20:24:46,582 | INFO     | -- intersect: 69701387120.92676
[2025-07-27 22:25:18] 2025-07-27 20:24:46,582 | INFO     | intersect: 69701387120.92676
[2025-07-27 22:25:18] 2025-07-27 20:24:46,582 | INFO     | chi2: 1.7714619728955838
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | sum of square deviations: 379832238.0
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | sum of deviations: -15427137290.0
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | mean x: 1753644285.0
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | mean y: 2466095.570093458
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | -- intersect: 71227887310.39307
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | intersect: 71227887310.39307
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | chi2: 1.7687451051934686
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | current chi2=1.7687451051934686 (change=0.15336867196049897 %)
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | right removable region: 106
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | sum of square deviations: 379832238.0
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | sum of deviations: -31924929744.0
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | mean x: 1753644590.0
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | mean y: 2499810.186915888
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | -- intersect: 147396466753.2869
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | intersect: 147396466753.2869
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | chi2: 0.2120229797028147
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | current chi2=0.2120229797028147 (change=88.03118650318822 %)
[2025-07-27 22:25:18] 2025-07-27 20:24:46,583 | INFO     | sum of square deviations: 329031285.5
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | sum of deviations: -28181788543.5
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | mean x: 1753644742.5
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | mean y: 2488556.794117647
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | -- intersect: 150203540831.97513
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | intersect: 150203540831.97513
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | chi2: 0.21140034492914786
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | current chi2=0.21140034492914786 (change=0.29366381631819416 %)
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | left removable region: 20
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | sum of square deviations: 197203697.5
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | sum of deviations: -18339955610.0
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | mean x: 1753644864.5
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | mean y: 2468302.8604651163
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | -- intersect: 163091545122.1958
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | intersect: 163091545122.1958
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | chi2: 0.19546124766823741
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | -- intersect: 163091545122.1958
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | current memory leak: -93.00 B/s (using 86 data points, chi2=0.20)
[2025-07-27 22:25:18] 2025-07-27 20:24:46,584 | INFO     | could have reported an average CPU frequency of 3926 MHz (7 samples)
[2025-07-27 22:25:18] 2025-07-27 20:24:46,585 | INFO     | ..............................
[2025-07-27 22:25:18] 2025-07-27 20:24:46,585 | INFO     | . Timing measurements:
[2025-07-27 22:25:18] 2025-07-27 20:24:46,585 | INFO     | . get job = 0 s
[2025-07-27 22:25:18] 2025-07-27 20:24:46,585 | INFO     | . initial setup = 1 s
[2025-07-27 22:25:18] 2025-07-27 20:24:46,585 | INFO     | . payload setup = 3 s
[2025-07-27 22:25:18] 2025-07-27 20:24:46,585 | INFO     | . stage-in = 0 s
[2025-07-27 22:25:18] 2025-07-27 20:24:46,585 | INFO     | . payload execution = 6829 s
[2025-07-27 22:25:18] 2025-07-27 20:24:46,585 | INFO     | . stage-out = 0 s
[2025-07-27 22:25:18] 2025-07-27 20:24:46,585 | INFO     | . log creation = 0 s
[2025-07-27 22:25:18] 2025-07-27 20:24:46,585 | INFO     | ..............................
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | 
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | job summary report
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | --------------------------------------------------
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | PanDA job id: 6746125800
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | task id: 45759816
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | errors: (none)
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | pilot state: finished 
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | transexitcode: 0
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | exeerrorcode: 0
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | exeerrordiag: 
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | exitcode: 0
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | exitmsg: OK
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | cpuconsumptiontime: 19838 s
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | nevents: 400
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | neventsw: 0
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | pid: 2801532
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | pgrp: 2801532
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | corecount: 3
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | event service: False
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | sizes: {0: 2397419, 3: 2397681, 11: 2397709, 6836: 2425031, 6837: 2425030, 6838: 2434274, 6842: 2434412}
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | --------------------------------------------------
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | 
[2025-07-27 22:25:18] 2025-07-27 20:24:46,616 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 22:25:18] 2025-07-27 20:24:46,631 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,631 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,631 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | job 6746125800 has completed (purged errors)
[2025-07-27 22:25:18] 2025-07-27 20:24:46,632 | INFO     | overall cleanup function is called
[2025-07-27 22:25:18] 2025-07-27 20:24:47,639 | INFO     | --- collectZombieJob: --- 10, [2801532]
[2025-07-27 22:25:18] 2025-07-27 20:24:47,639 | INFO     | zombie collector waiting for pid 2801532
[2025-07-27 22:25:18] 2025-07-27 20:24:47,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:25:18] 2025-07-27 20:24:47,639 | INFO     | collected zombie processes
[2025-07-27 22:25:18] 2025-07-27 20:24:47,640 | INFO     | will attempt to kill all subprocesses of pid=2801532
[2025-07-27 22:25:18] 2025-07-27 20:24:47,701 | INFO     | process IDs to be killed: [2801532] (in reverse order)
[2025-07-27 22:25:18] 2025-07-27 20:24:47,732 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:25:18] 2025-07-27 20:24:47,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:25:18] 2025-07-27 20:24:47,734 | INFO     | did not find any defunct processes belonging to 2801532
[2025-07-27 22:25:18] 2025-07-27 20:24:47,736 | INFO     | did not find any defunct processes belonging to 2801532
[2025-07-27 22:25:18] 2025-07-27 20:24:47,736 | INFO     | ready for new job
[2025-07-27 22:25:18] 2025-07-27 20:24:47,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:25:18] 2025-07-27 20:24:47,737 | INFO     | ***************************************
[2025-07-27 22:25:18] 2025-07-27 20:24:47,737 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:25:18] 2025-07-27 20:24:47,737 | INFO     | ***************************************
[2025-07-27 22:25:18] 2025-07-27 20:24:47,737 | INFO     | 
[2025-07-27 22:25:18] 2025-07-27 20:24:47,737 | INFO     | architecture information:
[2025-07-27 22:25:18] 2025-07-27 20:24:47,737 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:25:18] 2025-07-27 20:24:47,748 | INFO     | cat /etc/os-release:
[2025-07-27 22:25:18] NAME="CentOS Linux"
[2025-07-27 22:25:18] VERSION="7 (Core)"
[2025-07-27 22:25:18] ID="centos"
[2025-07-27 22:25:18] ID_LIKE="rhel fedora"
[2025-07-27 22:25:18] VERSION_ID="7"
[2025-07-27 22:25:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:25:18] ANSI_COLOR="0;31"
[2025-07-27 22:25:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:25:18] HOME_URL="https://www.centos.org/"
[2025-07-27 22:25:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:25:18] 
[2025-07-27 22:25:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:25:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:25:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:25:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:25:18] 
[2025-07-27 22:25:18] 2025-07-27 20:24:47,748 | INFO     | ***************************************
[2025-07-27 22:25:18] 2025-07-27 20:24:48,249 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 22:25:18] 2025-07-27 20:24:48,262 | INFO     | sufficient remaining disk space (364969459712 B)
[2025-07-27 22:25:18] 2025-07-27 20:24:48,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:25:18] 2025-07-27 20:24:48,263 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:25:18] 2025-07-27 20:24:48,263 | INFO     | update_server=False
[2025-07-27 22:25:18] 2025-07-27 20:24:48,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:25:18] 2025-07-27 20:24:48,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:25:18] 2025-07-27 20:24:48,263 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:25:18] 2025-07-27 20:24:48,263 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:25:18] 2025-07-27 20:24:48,263 | INFO     | aborting loop
[2025-07-27 22:25:18] 2025-07-27 20:24:48,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:25:18] 2025-07-27 20:24:48,571 | INFO     | all job control threads have been joined
[2025-07-27 22:25:18] 2025-07-27 20:24:48,802 | INFO     | all data control threads have been joined
[2025-07-27 22:25:18] 2025-07-27 20:24:49,126 | INFO     | all payload control threads have been joined
[2025-07-27 22:25:18] 2025-07-27 20:24:49,265 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:49,267 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:49,268 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:49,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:49,577 | INFO     | [job] control thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:49,603 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:49,805 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:49,808 | INFO     | [data] control thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:49,910 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:50,070 | INFO     | [job] validate thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:50,132 | INFO     | [payload] control thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:50,173 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:50,202 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:50,269 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:50,303 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:52,554 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:25:18] 2025-07-27 20:24:54,034 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139839249213248)>', '<ExcThread(monitor, started 139838615443200)>']
[2025-07-27 22:25:18] 2025-07-27 20:24:59,060 | INFO     | all workflow threads have been joined
[2025-07-27 22:25:18] 2025-07-27 20:24:59,060 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:25:18] 2025-07-27 20:24:59,060 | INFO     | traces error code: 0
[2025-07-27 22:25:18] 2025-07-27 20:24:59,060 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:25:18] 2025-07-27 20:25:17,999 | INFO     | PID=2795029 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 22:25:18] 2025-07-27 20:25:17,999 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:25:18] 2025-07-27 20:25:17,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:25:18] 2025-07-27 20:25:17,999 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:25:18] 2025-07-27 20:25:18,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:25:18] 2025-07-27 20:25:18,000 | INFO     | [monitor] control thread has ended
[2025-07-27 22:25:18] 2025-07-27 20:25:18,054 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:25:18] 2025-07-27 20:25:18,056 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:25:18] 2025-07-27 20:25:18,059 [wrapper] pilotpid: 2795029
[2025-07-27 22:25:18] 2025-07-27 20:25:18,061 [wrapper] Pilot exit status: 0
[2025-07-27 22:25:18] 2025-07-27 20:25:18,069 [wrapper] pandaids: 6746125800
[2025-07-27 22:25:18] 2025-07-27 20:25:18,090 [wrapper] cleanup supervisor_pilot 2818522 2795030
[2025-07-27 22:25:18] 2025-07-27 20:25:18,093 [wrapper] Test setup, not cleaning
[2025-07-27 22:25:18] 2025-07-27 20:25:18,095 [wrapper] apfmon messages muted
[2025-07-27 22:25:18] 2025-07-27 20:25:18,098 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:25:18] 2025-07-27 20:25:18,100 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:25:18]  *** Error codes and diagnostics ***
[2025-07-27 22:25:18]     "exeErrorCode": 0,
[2025-07-27 22:25:18]     "exeErrorDiag": "",
[2025-07-27 22:25:18]     "pilotErrorCode": 0,
[2025-07-27 22:25:18]     "pilotErrorDiag": "",
[2025-07-27 22:25:18]  *** Listing of results directory ***
[2025-07-27 22:25:18] total 412196
[2025-07-27 22:25:18] -rw-r--r-- 1 boinc boinc    530466 Jul 27 07:26 pilot3.tar.gz
[2025-07-27 22:25:18] -rwx------ 1 boinc boinc     36292 Jul 27 07:28 runpilot2-wrapper.sh
[2025-07-27 22:25:18] -rw-r--r-- 1 boinc boinc      5112 Jul 27 07:28 queuedata.json
[2025-07-27 22:25:18] -rw-r--r-- 1 boinc boinc       100 Jul 27 20:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:25:18] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 20:30 run_atlas
[2025-07-27 22:25:18] -rw-r--r-- 1 boinc boinc       105 Jul 27 20:30 job.xml
[2025-07-27 22:25:18] -rw-r--r-- 2 boinc boinc 238403922 Jul 27 20:30 EVNT.45759813._000001.pool.root.1
[2025-07-27 22:25:18] -rw-r--r-- 1 boinc boinc      6932 Jul 27 20:30 init_data.xml
[2025-07-27 22:25:18] drwxrwx--x 2 boinc boinc      4096 Jul 27 20:30 shared
[2025-07-27 22:25:18] -rw-r--r-- 2 boinc boinc    542864 Jul 27 20:30 input.tar.gz
[2025-07-27 22:25:18] -rw-r--r-- 2 boinc boinc     15095 Jul 27 20:30 start_atlas.sh
[2025-07-27 22:25:18] -rw-r--r-- 1 boinc boinc         0 Jul 27 20:30 boinc_lockfile
[2025-07-27 22:25:18] -rw-r--r-- 1 boinc boinc      2560 Jul 27 20:30 pandaJob.out
[2025-07-27 22:25:18] -rw------- 1 boinc boinc    980125 Jul 27 20:30 agis_schedconf.cvmfs.json
[2025-07-27 22:25:18] -rw------- 1 boinc boinc   1593052 Jul 27 20:30 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:25:18] drwx------ 4 boinc boinc      4096 Jul 27 20:30 pilot3
[2025-07-27 22:25:18] -rw------- 1 boinc boinc 178001433 Jul 27 22:24 HITS.45759816._000021.pool.root.1
[2025-07-27 22:25:18] -rw-r--r-- 1 boinc boinc       530 Jul 27 22:24 boinc_task_state.xml
[2025-07-27 22:25:18] -rw------- 1 boinc boinc      1017 Jul 27 22:24 memory_monitor_summary.json
[2025-07-27 22:25:18] -rw------- 1 boinc boinc    255921 Jul 27 22:24 log.45759816._000021.job.log.tgz.1
[2025-07-27 22:25:18] -rw------- 1 boinc boinc      7747 Jul 27 22:24 heartbeat.json
[2025-07-27 22:25:18] -rw-r--r-- 1 boinc boinc        27 Jul 27 22:25 wrapper_checkpoint.txt
[2025-07-27 22:25:18] -rw-r--r-- 1 boinc boinc      8192 Jul 27 22:25 boinc_mmap_file
[2025-07-27 22:25:18] -rw------- 1 boinc boinc       747 Jul 27 22:25 pilotlog.txt
[2025-07-27 22:25:18] -rw------- 1 boinc boinc        95 Jul 27 22:25 pilot_heartbeat.json
[2025-07-27 22:25:18] -rw------- 1 boinc boinc    648505 Jul 27 22:25 log.45759816._000021.job.log.1
[2025-07-27 22:25:18] -rw------- 1 boinc boinc       357 Jul 27 22:25 output.list
[2025-07-27 22:25:18] -rw-r--r-- 1 boinc boinc       620 Jul 27 22:25 runtime_log
[2025-07-27 22:25:18] -rw------- 1 boinc boinc    921600 Jul 27 22:25 result.tar.gz
[2025-07-27 22:25:18] -rw------- 1 boinc boinc       663 Jul 27 22:25 yTvMDmw68z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXLULDmoEiwsm.diag
[2025-07-27 22:25:18] -rw-r--r-- 1 boinc boinc      8754 Jul 27 22:25 runtime_log.err
[2025-07-27 22:25:18] -rw-r--r-- 1 boinc boinc     21254 Jul 27 22:25 stderr.txt
[2025-07-27 22:25:18] HITS file was successfully produced:
[2025-07-27 22:25:18] -rw------- 1 boinc boinc 178001433 Jul 27 22:24 shared/HITS.pool.root.1
[2025-07-27 22:25:18]  *** Contents of shared directory: ***
[2025-07-27 22:25:18] total 408104
[2025-07-27 22:25:18] -rw-r--r-- 2 boinc boinc 238403922 Jul 27 20:30 ATLAS.root_0
[2025-07-27 22:25:18] -rw-r--r-- 2 boinc boinc    542864 Jul 27 20:30 input.tar.gz
[2025-07-27 22:25:18] -rw-r--r-- 2 boinc boinc     15095 Jul 27 20:30 start_atlas.sh
[2025-07-27 22:25:18] -rw------- 1 boinc boinc 178001433 Jul 27 22:24 HITS.pool.root.1
[2025-07-27 22:25:18] -rw------- 1 boinc boinc    921600 Jul 27 22:25 result.tar.gz
22:25:19 (2791386): run_atlas exited; CPU time 19871.869573
22:25:19 (2791386): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN