Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:28:31 (571684): wrapper (7.7.26015): starting
05:28:31 (571684): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 05:28:31] Arguments: --nthreads 12
[2025-07-27 05:28:31] Threads: 12
[2025-07-27 05:28:31] Checking for CVMFS
[2025-07-27 05:28:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 05:28:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 05:28:31] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 05:28:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 05:28:31] 2.13.1.0 5053 10573 180980 148807 2 129 30023400 40960001 3814 16776704 0 11879567 99.871 14319034 48676 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 05:28:31] CVMFS is ok
[2025-07-27 05:28:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 05:28:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 05:28:31] Further information can be found at the LHC@home message board.
[2025-07-27 05:28:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 05:28:31] Checking for apptainer binary...
[2025-07-27 05:28:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 05:28:31] Running /usr/bin/apptainer --version
[2025-07-27 05:28:31] apptainer version 1.4.1-1.el9
[2025-07-27 05:28:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 05:28:32] c-210-33-1.aglt2.org
[2025-07-27 05:28:32] apptainer works
[2025-07-27 05:28:32] Set ATHENA_PROC_NUMBER=12
[2025-07-27 05:28:32] Set ATHENA_CORE_NUMBER=12
[2025-07-27 05:28:32] Starting ATLAS job with PandaID=6745966012
[2025-07-27 05:28:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 06:45:56]  *** The last 200 lines of the pilot log: ***
[2025-07-27 06:45:56]  protocol_id=None
[2025-07-27 06:45:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 06:45:56]  replicas=None
[2025-07-27 06:45:56]  scope=mc23_13p6TeV
[2025-07-27 06:45:56]  status=None
[2025-07-27 06:45:56]  status_code=0
[2025-07-27 06:45:56]  storage_token=
[2025-07-27 06:45:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745966012/log.45758307._000095.job.log.tgz.1
[2025-07-27 06:45:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/a4/log.45758307._000095.job.log.tgz.1
[2025-07-27 06:45:56]  workdir=None
[2025-07-27 06:45:56] ]
[2025-07-27 06:45:56] 2025-07-27 10:45:14,788 | INFO     | transferring file log.45758307._000095.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745966012/log.45758307._000095.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 06:45:56] 2025-07-27 10:45:14,789 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745966012/log.45758307._000095.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758307._000095.job
[2025-07-27 06:45:56] 2025-07-27 10:45:14,813 | INFO     | adding to output.list: log.45758307._000095.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/a4/log.45758307._000095.job.log.tg
[2025-07-27 06:45:56] 2025-07-27 10:45:14,814 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 06:45:56] 2025-07-27 10:45:14,814 | INFO     | summary of transferred files:
[2025-07-27 06:45:56] 2025-07-27 10:45:14,814 | INFO     |  -- lfn=log.45758307._000095.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 06:45:56] 2025-07-27 10:45:14,814 | INFO     | stage-out finished correctly
[2025-07-27 06:45:56] 2025-07-27 10:45:15,255 | INFO     | monitor loop #345: job 0:6745966012 is in state 'finished'
[2025-07-27 06:45:56] 2025-07-27 10:45:15,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:45:56] 2025-07-27 10:45:17,758 | INFO     | monitor loop #346: job 0:6745966012 is in state 'finished'
[2025-07-27 06:45:56] 2025-07-27 10:45:17,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:45:56] 2025-07-27 10:45:18,043 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 06:45:56] 2025-07-27 10:45:19,608 | INFO     | job 6745966012 has state=finished
[2025-07-27 06:45:56] 2025-07-27 10:45:19,608 | INFO     | preparing for final server update for job 6745966012 in state='finished'
[2025-07-27 06:45:56] 2025-07-27 10:45:19,609 | INFO     | this job has now completed (state=finished)
[2025-07-27 06:45:56] 2025-07-27 10:45:19,609 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 06:45:56] 2025-07-27 10:45:19,609 | INFO     | log transfer has been attempted: DONE
[2025-07-27 06:45:56] 2025-07-27 10:45:19,609 | INFO     | job 6745966012 has finished - writing final server update
[2025-07-27 06:45:56] 2025-07-27 10:45:19,609 | INFO     | total number of processed events: 400 (read)
[2025-07-27 06:45:56] 2025-07-27 10:45:19,611 | INFO     | executing command: lscpu
[2025-07-27 06:45:56] 2025-07-27 10:45:19,669 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 06:45:56] 2025-07-27 10:45:20,261 | INFO     | monitor loop #347: job 0:6745966012 is in state 'finished'
[2025-07-27 06:45:56] 2025-07-27 10:45:20,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:45:56] 2025-07-27 10:45:22,763 | INFO     | monitor loop #348: job 0:6745966012 is in state 'finished'
[2025-07-27 06:45:56] 2025-07-27 10:45:22,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:45:56] 2025-07-27 10:45:24,301 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 06:45:56] 2025-07-27 10:45:24,312 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2632.9295178571424
[2025-07-27 06:45:56] 2025-07-27 10:45:24,324 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745966012/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 06:45:56] 2025-07-27 10:45:24,326 | INFO     | extracted standard info from prmon json
[2025-07-27 06:45:56] 2025-07-27 10:45:24,326 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 06:45:56] 2025-07-27 10:45:24,326 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 06:45:56] 2025-07-27 10:45:24,327 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 06:45:56] 2025-07-27 10:45:24,327 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 06:45:56] 2025-07-27 10:45:24,330 | INFO     | fitting pss+swap vs Time
[2025-07-27 06:45:56] 2025-07-27 10:45:24,330 | INFO     | sum of square deviations: 97479037.0
[2025-07-27 06:45:56] 2025-07-27 10:45:24,331 | INFO     | sum of deviations: -12490398918.000002
[2025-07-27 06:45:56] 2025-07-27 10:45:24,331 | INFO     | mean x: 1753610895.5
[2025-07-27 06:45:56] 2025-07-27 10:45:24,331 | INFO     | mean y: 2938284.6764705884
[2025-07-27 06:45:56] 2025-07-27 10:45:24,331 | INFO     | -- intersect: 224700476399.93518
[2025-07-27 06:45:56] 2025-07-27 10:45:24,331 | INFO     | intersect: 224700476399.93518
[2025-07-27 06:45:56] 2025-07-27 10:45:24,331 | INFO     | chi2: 0.13282140206168944
[2025-07-27 06:45:56] 2025-07-27 10:45:24,331 | INFO     | -- intersect: 224700476399.93518
[2025-07-27 06:45:56] 2025-07-27 10:45:24,331 | INFO     | current memory leak: -128.13 B/s (using 68 data points, chi2=0.13)
[2025-07-27 06:45:56] 2025-07-27 10:45:24,332 | INFO     | could have reported an average CPU frequency of 2691 MHz (6 samples)
[2025-07-27 06:45:56] 2025-07-27 10:45:24,332 | INFO     | ..............................
[2025-07-27 06:45:56] 2025-07-27 10:45:24,332 | INFO     | . Timing measurements:
[2025-07-27 06:45:56] 2025-07-27 10:45:24,332 | INFO     | . get job = 0 s
[2025-07-27 06:45:56] 2025-07-27 10:45:24,333 | INFO     | . initial setup = 2 s
[2025-07-27 06:45:56] 2025-07-27 10:45:24,333 | INFO     | . payload setup = 6 s
[2025-07-27 06:45:56] 2025-07-27 10:45:24,333 | INFO     | . stage-in = 0 s
[2025-07-27 06:45:56] 2025-07-27 10:45:24,333 | INFO     | . payload execution = 4567 s
[2025-07-27 06:45:56] 2025-07-27 10:45:24,333 | INFO     | . stage-out = 0 s
[2025-07-27 06:45:56] 2025-07-27 10:45:24,333 | INFO     | . log creation = 0 s
[2025-07-27 06:45:56] 2025-07-27 10:45:24,333 | INFO     | ..............................
[2025-07-27 06:45:56] 2025-07-27 10:45:24,895 | INFO     | 
[2025-07-27 06:45:56] 2025-07-27 10:45:24,895 | INFO     | job summary report
[2025-07-27 06:45:56] 2025-07-27 10:45:24,895 | INFO     | --------------------------------------------------
[2025-07-27 06:45:56] 2025-07-27 10:45:24,895 | INFO     | PanDA job id: 6745966012
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | task id: 45758307
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | errors: (none)
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | pilot state: finished 
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | transexitcode: 0
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | exeerrorcode: 0
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | exeerrordiag: 
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | exitcode: 0
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | exitmsg: OK
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | cpuconsumptiontime: 48794 s
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | nevents: 400
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | neventsw: 0
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | pid: 588797
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | pgrp: 588797
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | corecount: 12
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | event service: False
[2025-07-27 06:45:56] 2025-07-27 10:45:24,896 | INFO     | sizes: {0: 2397452, 4: 2397714, 11: 2397742, 4578: 2423982, 4579: 2432980, 4582: 2433036, 4588: 2433358}
[2025-07-27 06:45:56] 2025-07-27 10:45:24,897 | INFO     | --------------------------------------------------
[2025-07-27 06:45:56] 2025-07-27 10:45:24,897 | INFO     | 
[2025-07-27 06:45:56] 2025-07-27 10:45:24,897 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 06:45:56] 2025-07-27 10:45:24,918 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,919 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,919 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,919 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,919 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,919 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,919 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,920 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,920 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,920 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,920 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,920 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,920 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 06:45:56] 2025-07-27 10:45:24,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,920 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 06:45:56] 2025-07-27 10:45:24,920 | INFO     | job 6745966012 has completed (purged errors)
[2025-07-27 06:45:56] 2025-07-27 10:45:24,920 | INFO     | overall cleanup function is called
[2025-07-27 06:45:56] 2025-07-27 10:45:25,929 | INFO     | --- collectZombieJob: --- 10, [588797]
[2025-07-27 06:45:56] 2025-07-27 10:45:25,929 | INFO     | zombie collector waiting for pid 588797
[2025-07-27 06:45:56] 2025-07-27 10:45:25,929 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 06:45:56] 2025-07-27 10:45:25,929 | INFO     | collected zombie processes
[2025-07-27 06:45:56] 2025-07-27 10:45:25,929 | INFO     | will attempt to kill all subprocesses of pid=588797
[2025-07-27 06:45:56] 2025-07-27 10:45:26,151 | INFO     | process IDs to be killed: [588797] (in reverse order)
[2025-07-27 06:45:56] 2025-07-27 10:45:26,220 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 06:45:56] 2025-07-27 10:45:26,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 06:45:56] 2025-07-27 10:45:26,230 | INFO     | did not find any defunct processes belonging to 588797
[2025-07-27 06:45:56] 2025-07-27 10:45:26,240 | INFO     | did not find any defunct processes belonging to 588797
[2025-07-27 06:45:56] 2025-07-27 10:45:26,241 | INFO     | ready for new job
[2025-07-27 06:45:56] 2025-07-27 10:45:26,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 06:45:56] 2025-07-27 10:45:26,243 | INFO     | ***************************************
[2025-07-27 06:45:56] 2025-07-27 10:45:26,243 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 06:45:56] 2025-07-27 10:45:26,243 | INFO     | ***************************************
[2025-07-27 06:45:56] 2025-07-27 10:45:26,243 | INFO     | 
[2025-07-27 06:45:56] 2025-07-27 10:45:26,247 | INFO     | architecture information:
[2025-07-27 06:45:56] 2025-07-27 10:45:26,248 | INFO     | executing command: cat /etc/os-release
[2025-07-27 06:45:56] 2025-07-27 10:45:26,264 | INFO     | cat /etc/os-release:
[2025-07-27 06:45:56] NAME="CentOS Linux"
[2025-07-27 06:45:56] VERSION="7 (Core)"
[2025-07-27 06:45:56] ID="centos"
[2025-07-27 06:45:56] ID_LIKE="rhel fedora"
[2025-07-27 06:45:56] VERSION_ID="7"
[2025-07-27 06:45:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 06:45:56] ANSI_COLOR="0;31"
[2025-07-27 06:45:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 06:45:56] HOME_URL="https://www.centos.org/"
[2025-07-27 06:45:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 06:45:56] 
[2025-07-27 06:45:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 06:45:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 06:45:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 06:45:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 06:45:56] 
[2025-07-27 06:45:56] 2025-07-27 10:45:26,265 | INFO     | ***************************************
[2025-07-27 06:45:56] 2025-07-27 10:45:26,768 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 06:45:56] 2025-07-27 10:45:26,784 | INFO     | sufficient remaining disk space (75274125312 B)
[2025-07-27 06:45:56] 2025-07-27 10:45:26,784 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 06:45:56] 2025-07-27 10:45:26,785 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 06:45:56] 2025-07-27 10:45:26,785 | INFO     | update_server=False
[2025-07-27 06:45:56] 2025-07-27 10:45:26,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 06:45:56] 2025-07-27 10:45:26,785 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:45:56] 2025-07-27 10:45:26,785 | INFO     | aborting loop
[2025-07-27 06:45:56] 2025-07-27 10:45:26,838 | INFO     | all job control threads have been joined
[2025-07-27 06:45:56] 2025-07-27 10:45:27,526 | INFO     | all data control threads have been joined
[2025-07-27 06:45:56] 2025-07-27 10:45:27,612 | INFO     | all payload control threads have been joined
[2025-07-27 06:45:56] 2025-07-27 10:45:27,790 | INFO     | [job] retrieve thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:27,791 | INFO     | [job] job monitor thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:27,844 | INFO     | [job] control thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:27,852 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:27,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 06:45:56] 2025-07-27 10:45:28,085 | INFO     | [payload] failed_post thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:28,402 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:28,532 | INFO     | [data] control thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:28,618 | INFO     | [payload] control thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:28,667 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 06:45:56] 2025-07-27 10:45:28,801 | INFO     | [data] copytool_in thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:28,976 | INFO     | [job] validate thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:29,170 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:29,376 | INFO     | [payload] validate_post thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:29,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:45:56] 2025-07-27 10:45:29,945 | INFO     | [data] copytool_out thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:30,475 | INFO     | [job] queue monitor thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:32,673 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:36,942 | INFO     | job.realtimelogging is not enabled
[2025-07-27 06:45:56] 2025-07-27 10:45:37,947 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 06:45:56] 2025-07-27 10:45:37,961 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173827635008)>', '<ExcThread(monitor, started 140173329278720)>']
[2025-07-27 06:45:56] 2025-07-27 10:45:42,985 | INFO     | all workflow threads have been joined
[2025-07-27 06:45:56] 2025-07-27 10:45:42,986 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 06:45:56] 2025-07-27 10:45:42,986 | INFO     | traces error code: 0
[2025-07-27 06:45:56] 2025-07-27 10:45:42,987 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 06:45:56] 2025-07-27 10:45:56,534 | INFO     | PID=575957 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 06:45:56] 2025-07-27 10:45:56,534 | INFO     | .. there are 8 such processes running
[2025-07-27 06:45:56] 2025-07-27 10:45:56,535 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 06:45:56] 2025-07-27 10:45:56,535 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 06:45:56] 2025-07-27 10:45:56,535 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 06:45:56] 2025-07-27 10:45:56,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 06:45:56] 2025-07-27 10:45:56,535 | INFO     | [monitor] control thread has ended
[2025-07-27 06:45:56] 2025-07-27 10:45:56,718 [wrapper] ==== pilot stdout END ====
[2025-07-27 06:45:56] 2025-07-27 10:45:56,722 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 06:45:56] 2025-07-27 10:45:56,725 [wrapper] pilotpid: 575957
[2025-07-27 06:45:56] 2025-07-27 10:45:56,728 [wrapper] Pilot exit status: 0
[2025-07-27 06:45:56] 2025-07-27 10:45:56,740 [wrapper] pandaids: 6745966012
[2025-07-27 06:45:56] 2025-07-27 10:45:56,788 [wrapper] cleanup supervisor_pilot  659529 575958
[2025-07-27 06:45:56] 2025-07-27 10:45:56,791 [wrapper] Test setup, not cleaning
[2025-07-27 06:45:56] 2025-07-27 10:45:56,794 [wrapper] apfmon messages muted
[2025-07-27 06:45:56] 2025-07-27 10:45:56,798 [wrapper] ==== wrapper stdout END ====
[2025-07-27 06:45:56] 2025-07-27 10:45:56,801 [wrapper] ==== wrapper stderr END ====
[2025-07-27 06:45:56]  *** Error codes and diagnostics ***
[2025-07-27 06:45:56]     "exeErrorCode": 0,
[2025-07-27 06:45:56]     "exeErrorDiag": "",
[2025-07-27 06:45:56]     "pilotErrorCode": 0,
[2025-07-27 06:45:56]     "pilotErrorDiag": "",
[2025-07-27 06:45:56]  *** Listing of results directory ***
[2025-07-27 06:45:56] total 414356
[2025-07-27 06:45:56] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 22:22 pilot3.tar.gz
[2025-07-27 06:45:56] -rwx------. 1 boincer umatlas     36292 Jul 26 22:37 runpilot2-wrapper.sh
[2025-07-27 06:45:56] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 22:37 queuedata.json
[2025-07-27 06:45:56] -rw-r--r--. 1 boincer umatlas       100 Jul 27 05:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 06:45:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 05:28 run_atlas
[2025-07-27 06:45:56] -rw-r--r--. 1 boincer umatlas       105 Jul 27 05:28 job.xml
[2025-07-27 06:45:56] -rw-r--r--. 2 boincer umatlas 241399885 Jul 27 05:28 EVNT.45758305._000004.pool.root.1
[2025-07-27 06:45:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 05:28 start_atlas.sh
[2025-07-27 06:45:56] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 05:28 shared
[2025-07-27 06:45:56] -rw-r--r--. 2 boincer umatlas    542866 Jul 27 05:28 input.tar.gz
[2025-07-27 06:45:56] -rw-r--r--. 1 boincer umatlas         0 Jul 27 05:28 boinc_lockfile
[2025-07-27 06:45:56] -rw-r--r--. 1 boincer umatlas      2545 Jul 27 05:28 pandaJob.out
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas    980125 Jul 27 05:28 agis_schedconf.cvmfs.json
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas   1593052 Jul 27 05:28 agis_ddmendpoints.agis.ALL.json
[2025-07-27 06:45:56] drwx------. 4 boincer umatlas      4096 Jul 27 05:28 pilot3
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas 177360001 Jul 27 06:44 HITS.45758307._000095.pool.root.1
[2025-07-27 06:45:56] -rw-r--r--. 1 boincer umatlas       529 Jul 27 06:44 boinc_task_state.xml
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas      1032 Jul 27 06:45 memory_monitor_summary.json
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas    375175 Jul 27 06:45 log.45758307._000095.job.log.tgz.1
[2025-07-27 06:45:56] -rw-r--r--. 1 boincer umatlas      6840 Jul 27 06:45 init_data.xml
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas      7816 Jul 27 06:45 heartbeat.json
[2025-07-27 06:45:56] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 06:45 boinc_mmap_file
[2025-07-27 06:45:56] -rw-r--r--. 1 boincer umatlas        27 Jul 27 06:45 wrapper_checkpoint.txt
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas       821 Jul 27 06:45 pilotlog.txt
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas        95 Jul 27 06:45 pilot_heartbeat.json
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas    459849 Jul 27 06:45 log.45758307._000095.job.log.1
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas       357 Jul 27 06:45 output.list
[2025-07-27 06:45:56] -rw-r--r--. 1 boincer umatlas       620 Jul 27 06:45 runtime_log
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas    849920 Jul 27 06:45 result.tar.gz
[2025-07-27 06:45:56] -rw-r--r--. 1 boincer umatlas      8672 Jul 27 06:45 runtime_log.err
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas       655 Jul 27 06:45 JzwNDmpR6z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNyTLDmsq2Dqn.diag
[2025-07-27 06:45:56] -rw-r--r--. 1 boincer umatlas     21819 Jul 27 06:45 stderr.txt
[2025-07-27 06:45:56] HITS file was successfully produced:
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas 177360001 Jul 27 06:44 shared/HITS.pool.root.1
[2025-07-27 06:45:56]  *** Contents of shared directory: ***
[2025-07-27 06:45:56] total 410332
[2025-07-27 06:45:56] -rw-r--r--. 2 boincer umatlas 241399885 Jul 27 05:28 ATLAS.root_0
[2025-07-27 06:45:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 05:28 start_atlas.sh
[2025-07-27 06:45:56] -rw-r--r--. 2 boincer umatlas    542866 Jul 27 05:28 input.tar.gz
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas 177360001 Jul 27 06:44 HITS.pool.root.1
[2025-07-27 06:45:56] -rw-------. 1 boincer umatlas    849920 Jul 27 06:45 result.tar.gz
06:45:58 (571684): run_atlas exited; CPU time 48847.536626
06:45:58 (571684): called boinc_finish(0)

</stderr_txt>
]]>

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