Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:26:31 (17053): wrapper (7.7.26015): starting
03:26:31 (17053): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 03:26:31] Arguments: --nthreads 4
[2025-07-27 03:26:31] Threads: 4
[2025-07-27 03:26:31] Checking for CVMFS
[2025-07-27 03:26:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 03:26:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 03:26:31] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 03:26:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 03:26:31] 2.11.2.0 26179 525758 97072 148804 2 56 15179906 20275201 1 130560 0 64526401 99.976 22748945 20833 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 03:26:31] CVMFS is ok
[2025-07-27 03:26:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 03:26:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 03:26:31] Further information can be found at the LHC@home message board.
[2025-07-27 03:26:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 03:26:31] Checking for apptainer binary...
[2025-07-27 03:26:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 03:26:31] Running /usr/bin/apptainer --version
[2025-07-27 03:26:31] apptainer version 1.3.2-1.el7
[2025-07-27 03:26:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 03:26:32] c-205-33.aglt2.org
[2025-07-27 03:26:32] apptainer works
[2025-07-27 03:26:32] Set ATHENA_PROC_NUMBER=4
[2025-07-27 03:26:32] Set ATHENA_CORE_NUMBER=4
[2025-07-27 03:26:32] Starting ATLAS job with PandaID=6745965975
[2025-07-27 03:26:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 05:22:19]  *** The last 200 lines of the pilot log: ***
[2025-07-27 05:22:19] 2025-07-27 09:21:46,522 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 05:22:19] 2025-07-27 09:21:46,925 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 05:22:19] 2025-07-27 09:21:46,926 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3601.85625
[2025-07-27 05:22:19] 2025-07-27 09:21:46,926 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745965975/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 05:22:19] 2025-07-27 09:21:46,927 | INFO     | extracted standard info from prmon json
[2025-07-27 05:22:19] 2025-07-27 09:21:46,927 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 05:22:19] 2025-07-27 09:21:46,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 05:22:19] 2025-07-27 09:21:46,927 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 05:22:19] 2025-07-27 09:21:46,927 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 05:22:19] 2025-07-27 09:21:46,928 | INFO     | fitting pss+swap vs Time
[2025-07-27 05:22:19] 2025-07-27 09:21:46,928 | INFO     | sum of square deviations: 447383272.0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,928 | INFO     | sum of deviations: -15140104901.0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,928 | INFO     | mean x: 1753604637.0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,928 | INFO     | mean y: 2418633.150442478
[2025-07-27 05:22:19] 2025-07-27 09:21:46,929 | INFO     | -- intersect: 59346966855.46311
[2025-07-27 05:22:19] 2025-07-27 09:21:46,929 | INFO     | intersect: 59346966855.46311
[2025-07-27 05:22:19] 2025-07-27 09:21:46,929 | INFO     | chi2: 1.1938769727877423
[2025-07-27 05:22:19] 2025-07-27 09:21:46,929 | INFO     | sum of square deviations: 390582207.0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,929 | INFO     | sum of deviations: -13679576258.500002
[2025-07-27 05:22:19] 2025-07-27 09:21:46,929 | INFO     | mean x: 1753604484.5
[2025-07-27 05:22:19] 2025-07-27 09:21:46,929 | INFO     | mean y: 2422557.046296296
[2025-07-27 05:22:19] 2025-07-27 09:21:46,929 | INFO     | -- intersect: 61419880503.26896
[2025-07-27 05:22:19] 2025-07-27 09:21:46,929 | INFO     | intersect: 61419880503.26896
[2025-07-27 05:22:19] 2025-07-27 09:21:46,929 | INFO     | chi2: 1.1907891161363489
[2025-07-27 05:22:19] 2025-07-27 09:21:46,929 | INFO     | current chi2=1.1907891161363489 (change=0.25864110974376125 %)
[2025-07-27 05:22:19] 2025-07-27 09:21:46,929 | INFO     | right removable region: 107
[2025-07-27 05:22:19] 2025-07-27 09:21:46,929 | INFO     | sum of square deviations: 390582207.0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,930 | INFO     | sum of deviations: -23785480052.499996
[2025-07-27 05:22:19] 2025-07-27 09:21:46,930 | INFO     | mean x: 1753604789.5
[2025-07-27 05:22:19] 2025-07-27 09:21:46,930 | INFO     | mean y: 2440940.3981481483
[2025-07-27 05:22:19] 2025-07-27 09:21:46,930 | INFO     | -- intersect: 106792589065.65749
[2025-07-27 05:22:19] 2025-07-27 09:21:46,930 | INFO     | intersect: 106792589065.65749
[2025-07-27 05:22:19] 2025-07-27 09:21:46,930 | INFO     | chi2: 0.11075956911067411
[2025-07-27 05:22:19] 2025-07-27 09:21:46,930 | INFO     | current chi2=0.11075956911067411 (change=90.72269826496051 %)
[2025-07-27 05:22:19] 2025-07-27 09:21:46,930 | INFO     | sum of square deviations: 338804492.0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,930 | INFO     | sum of deviations: -21237899324.0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,930 | INFO     | mean x: 1753604942.0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,930 | INFO     | mean y: 2433424.5631067962
[2025-07-27 05:22:19] 2025-07-27 09:21:46,930 | INFO     | -- intersect: 109926847331.87595
[2025-07-27 05:22:19] 2025-07-27 09:21:46,930 | INFO     | intersect: 109926847331.87595
[2025-07-27 05:22:19] 2025-07-27 09:21:46,931 | INFO     | chi2: 0.1097119994803745
[2025-07-27 05:22:19] 2025-07-27 09:21:46,931 | INFO     | current chi2=0.1097119994803745 (change=0.9458050791556032 %)
[2025-07-27 05:22:19] 2025-07-27 09:21:46,931 | INFO     | left removable region: 20
[2025-07-27 05:22:19] 2025-07-27 09:21:46,931 | INFO     | sum of square deviations: 204163828.0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,931 | INFO     | sum of deviations: -14152401014.000002
[2025-07-27 05:22:19] 2025-07-27 09:21:46,931 | INFO     | mean x: 1753605064.0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,931 | INFO     | mean y: 2419305.724137931
[2025-07-27 05:22:19] 2025-07-27 09:21:46,931 | INFO     | -- intersect: 121560299215.32858
[2025-07-27 05:22:19] 2025-07-27 09:21:46,931 | INFO     | intersect: 121560299215.32858
[2025-07-27 05:22:19] 2025-07-27 09:21:46,931 | INFO     | chi2: 0.09972398199061325
[2025-07-27 05:22:19] 2025-07-27 09:21:46,931 | INFO     | -- intersect: 121560299215.32858
[2025-07-27 05:22:19] 2025-07-27 09:21:46,931 | INFO     | current memory leak: -69.32 B/s (using 87 data points, chi2=0.10)
[2025-07-27 05:22:19] 2025-07-27 09:21:46,931 | INFO     | could have reported an average CPU frequency of 2788 MHz (7 samples)
[2025-07-27 05:22:19] 2025-07-27 09:21:46,931 | INFO     | ..............................
[2025-07-27 05:22:19] 2025-07-27 09:21:46,932 | INFO     | . Timing measurements:
[2025-07-27 05:22:19] 2025-07-27 09:21:46,932 | INFO     | . get job = 0 s
[2025-07-27 05:22:19] 2025-07-27 09:21:46,932 | INFO     | . initial setup = 1 s
[2025-07-27 05:22:19] 2025-07-27 09:21:46,932 | INFO     | . payload setup = 4 s
[2025-07-27 05:22:19] 2025-07-27 09:21:46,932 | INFO     | . stage-in = 0 s
[2025-07-27 05:22:19] 2025-07-27 09:21:46,932 | INFO     | . payload execution = 6877 s
[2025-07-27 05:22:19] 2025-07-27 09:21:46,932 | INFO     | . stage-out = 0 s
[2025-07-27 05:22:19] 2025-07-27 09:21:46,932 | INFO     | . log creation = 0 s
[2025-07-27 05:22:19] 2025-07-27 09:21:46,932 | INFO     | ..............................
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | 
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | job summary report
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | --------------------------------------------------
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | PanDA job id: 6745965975
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | task id: 45758307
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | errors: (none)
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | pilot state: finished 
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | transexitcode: 0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | exeerrorcode: 0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | exeerrordiag: 
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | exitcode: 0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | exitmsg: OK
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | cpuconsumptiontime: 26771 s
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | nevents: 400
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | neventsw: 0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | pid: 27029
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | pgrp: 27029
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | corecount: 4
[2025-07-27 05:22:19] 2025-07-27 09:21:46,969 | INFO     | event service: False
[2025-07-27 05:22:19] 2025-07-27 09:21:46,970 | INFO     | sizes: {0: 2397226, 1: 2397481, 3: 2397743, 11: 2397771, 6886: 2425093, 6888: 2434091, 6890: 2434275, 6893: 2434469}
[2025-07-27 05:22:19] 2025-07-27 09:21:46,970 | INFO     | --------------------------------------------------
[2025-07-27 05:22:19] 2025-07-27 09:21:46,970 | INFO     | 
[2025-07-27 05:22:19] 2025-07-27 09:21:46,970 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,980 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 05:22:19] 2025-07-27 09:21:46,981 | INFO     | job 6745965975 has completed (purged errors)
[2025-07-27 05:22:19] 2025-07-27 09:21:46,981 | INFO     | overall cleanup function is called
[2025-07-27 05:22:19] 2025-07-27 09:21:47,983 | INFO     | --- collectZombieJob: --- 10, [27029]
[2025-07-27 05:22:19] 2025-07-27 09:21:47,983 | INFO     | zombie collector waiting for pid 27029
[2025-07-27 05:22:19] 2025-07-27 09:21:47,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 05:22:19] 2025-07-27 09:21:47,984 | INFO     | collected zombie processes
[2025-07-27 05:22:19] 2025-07-27 09:21:47,984 | INFO     | will attempt to kill all subprocesses of pid=27029
[2025-07-27 05:22:19] 2025-07-27 09:21:48,017 | INFO     | process IDs to be killed: [27029] (in reverse order)
[2025-07-27 05:22:19] 2025-07-27 09:21:48,038 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 05:22:19] 2025-07-27 09:21:48,039 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 05:22:19] 2025-07-27 09:21:48,039 | INFO     | did not find any defunct processes belonging to 27029
[2025-07-27 05:22:19] 2025-07-27 09:21:48,040 | INFO     | did not find any defunct processes belonging to 27029
[2025-07-27 05:22:19] 2025-07-27 09:21:48,040 | INFO     | ready for new job
[2025-07-27 05:22:19] 2025-07-27 09:21:48,040 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 05:22:19] 2025-07-27 09:21:48,041 | INFO     | ***************************************
[2025-07-27 05:22:19] 2025-07-27 09:21:48,041 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 05:22:19] 2025-07-27 09:21:48,041 | INFO     | ***************************************
[2025-07-27 05:22:19] 2025-07-27 09:21:48,041 | INFO     | 
[2025-07-27 05:22:19] 2025-07-27 09:21:48,042 | INFO     | architecture information:
[2025-07-27 05:22:19] 2025-07-27 09:21:48,042 | INFO     | executing command: cat /etc/os-release
[2025-07-27 05:22:19] 2025-07-27 09:21:48,049 | INFO     | cat /etc/os-release:
[2025-07-27 05:22:19] NAME="CentOS Linux"
[2025-07-27 05:22:19] VERSION="7 (Core)"
[2025-07-27 05:22:19] ID="centos"
[2025-07-27 05:22:19] ID_LIKE="rhel fedora"
[2025-07-27 05:22:19] VERSION_ID="7"
[2025-07-27 05:22:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 05:22:19] ANSI_COLOR="0;31"
[2025-07-27 05:22:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 05:22:19] HOME_URL="https://www.centos.org/"
[2025-07-27 05:22:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 05:22:19] 
[2025-07-27 05:22:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 05:22:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 05:22:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 05:22:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 05:22:19] 
[2025-07-27 05:22:19] 2025-07-27 09:21:48,049 | INFO     | ***************************************
[2025-07-27 05:22:19] 2025-07-27 09:21:48,552 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 05:22:19] 2025-07-27 09:21:48,572 | INFO     | sufficient remaining disk space (18587058176 B)
[2025-07-27 05:22:19] 2025-07-27 09:21:48,573 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 05:22:19] 2025-07-27 09:21:48,574 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 05:22:19] 2025-07-27 09:21:48,574 | INFO     | update_server=False
[2025-07-27 05:22:19] 2025-07-27 09:21:48,574 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 05:22:19] 2025-07-27 09:21:48,574 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 05:22:19] 2025-07-27 09:21:48,957 | INFO     | all data control threads have been joined
[2025-07-27 05:22:19] 2025-07-27 09:21:49,025 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 05:22:19] 2025-07-27 09:21:49,025 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 05:22:19] 2025-07-27 09:21:49,025 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 05:22:19] 2025-07-27 09:21:49,026 | INFO     | will abort loop
[2025-07-27 05:22:19] 2025-07-27 09:21:49,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 05:22:19] 2025-07-27 09:21:49,577 | INFO     | [job] retrieve thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:49,579 | INFO     | [job] queue monitor thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:49,598 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:49,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 05:22:19] 2025-07-27 09:21:49,963 | INFO     | [data] control thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:49,992 | INFO     | all job control threads have been joined
[2025-07-27 05:22:19] 2025-07-27 09:21:50,030 | INFO     | [job] job monitor thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:50,055 | INFO     | [data] copytool_in thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:50,077 | INFO     | all payload control threads have been joined
[2025-07-27 05:22:19] 2025-07-27 09:21:50,129 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:50,137 | INFO     | [job] validate thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:50,261 | INFO     | [payload] validate_post thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:50,275 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:50,341 | INFO     | [payload] failed_post thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:50,993 | INFO     | [job] control thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:51,081 | INFO     | [payload] control thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:51,348 | INFO     | [data] copytool_out thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:53,651 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:21:59,213 | INFO     | job.realtimelogging is not enabled
[2025-07-27 05:22:19] 2025-07-27 09:22:00,219 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 05:22:19] 2025-07-27 09:22:00,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460029286208)>', '<ExcThread(monitor, started 140458701346560)>']
[2025-07-27 05:22:19] 2025-07-27 09:22:05,271 | INFO     | all workflow threads have been joined
[2025-07-27 05:22:19] 2025-07-27 09:22:05,271 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 05:22:19] 2025-07-27 09:22:05,272 | INFO     | traces error code: 0
[2025-07-27 05:22:19] 2025-07-27 09:22:05,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 05:22:19] 2025-07-27 09:22:19,643 | INFO     | PID=20625 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 05:22:19] 2025-07-27 09:22:19,643 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 05:22:19] 2025-07-27 09:22:19,644 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 05:22:19] 2025-07-27 09:22:19,644 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 05:22:19] 2025-07-27 09:22:19,644 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 05:22:19] 2025-07-27 09:22:19,644 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 05:22:19] 2025-07-27 09:22:19,644 | INFO     | [monitor] control thread has ended
[2025-07-27 05:22:19] 2025-07-27 09:22:19,704 [wrapper] ==== pilot stdout END ====
[2025-07-27 05:22:19] 2025-07-27 09:22:19,706 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 05:22:19] 2025-07-27 09:22:19,708 [wrapper] pilotpid: 20625
[2025-07-27 05:22:19] 2025-07-27 09:22:19,710 [wrapper] Pilot exit status: 0
[2025-07-27 05:22:19] 2025-07-27 09:22:19,716 [wrapper] pandaids: 6745965975
[2025-07-27 05:22:19] 2025-07-27 09:22:19,731 [wrapper] cleanup supervisor_pilot 29505 20626
[2025-07-27 05:22:19] 2025-07-27 09:22:19,732 [wrapper] Test setup, not cleaning
[2025-07-27 05:22:19] 2025-07-27 09:22:19,734 [wrapper] apfmon messages muted
[2025-07-27 05:22:19] 2025-07-27 09:22:19,736 [wrapper] ==== wrapper stdout END ====
[2025-07-27 05:22:19] 2025-07-27 09:22:19,738 [wrapper] ==== wrapper stderr END ====
[2025-07-27 05:22:19]  *** Error codes and diagnostics ***
[2025-07-27 05:22:19]     "exeErrorCode": 0,
[2025-07-27 05:22:19]     "exeErrorDiag": "",
[2025-07-27 05:22:19]     "pilotErrorCode": 0,
[2025-07-27 05:22:19]     "pilotErrorDiag": "",
[2025-07-27 05:22:19]  *** Listing of results directory ***
[2025-07-27 05:22:19] total 408468
[2025-07-27 05:22:19] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 22:22 pilot3.tar.gz
[2025-07-27 05:22:19] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 22:31 queuedata.json
[2025-07-27 05:22:19] -rwx------ 1 boincer umatlas     36292 Jul 26 22:32 runpilot2-wrapper.sh
[2025-07-27 05:22:19] -rw-r--r-- 1 boincer umatlas       100 Jul 27 03:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 05:22:19] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 03:26 run_atlas
[2025-07-27 05:22:19] -rw-r--r-- 1 boincer umatlas       105 Jul 27 03:26 job.xml
[2025-07-27 05:22:19] -rw-r--r-- 2 boincer umatlas 243794340 Jul 27 03:26 EVNT.45758305._000003.pool.root.1
[2025-07-27 05:22:19] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 03:26 start_atlas.sh
[2025-07-27 05:22:19] drwxrwx--x 2 boincer umatlas      4096 Jul 27 03:26 shared
[2025-07-27 05:22:19] -rw-r--r-- 2 boincer umatlas    542868 Jul 27 03:26 input.tar.gz
[2025-07-27 05:22:19] -rw-r--r-- 1 boincer umatlas         0 Jul 27 03:26 boinc_lockfile
[2025-07-27 05:22:19] -rw-r--r-- 1 boincer umatlas      2546 Jul 27 03:26 pandaJob.out
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas    980125 Jul 27 03:26 agis_schedconf.cvmfs.json
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas   1593052 Jul 27 03:26 agis_ddmendpoints.agis.ALL.json
[2025-07-27 05:22:19] drwx------ 4 boincer umatlas      4096 Jul 27 03:26 pilot3
[2025-07-27 05:22:19] -rw-r--r-- 1 boincer umatlas      6154 Jul 27 05:10 init_data.xml
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas 168803010 Jul 27 05:21 HITS.45758307._000058.pool.root.1
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas        95 Jul 27 05:21 pilot_heartbeat.json
[2025-07-27 05:22:19] -rw-r--r-- 1 boincer umatlas       529 Jul 27 05:21 boinc_task_state.xml
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas      1042 Jul 27 05:21 memory_monitor_summary.json
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas    257814 Jul 27 05:21 log.45758307._000058.job.log.tgz.1
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas      7820 Jul 27 05:21 heartbeat.json
[2025-07-27 05:22:19] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 05:22 boinc_mmap_file
[2025-07-27 05:22:19] -rw-r--r-- 1 boincer umatlas        27 Jul 27 05:22 wrapper_checkpoint.txt
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas       815 Jul 27 05:22 pilotlog.txt
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas    645287 Jul 27 05:22 log.45758307._000058.job.log.1
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas       357 Jul 27 05:22 output.list
[2025-07-27 05:22:19] -rw-r--r-- 1 boincer umatlas       620 Jul 27 05:22 runtime_log
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas    921600 Jul 27 05:22 result.tar.gz
[2025-07-27 05:22:19] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 05:22 runtime_log.err
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas       656 Jul 27 05:22 iZELDmnM6z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRxTLDmOCUVzm.diag
[2025-07-27 05:22:19] -rw-r--r-- 1 boincer umatlas     21078 Jul 27 05:22 stderr.txt
[2025-07-27 05:22:19] HITS file was successfully produced:
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas 168803010 Jul 27 05:21 shared/HITS.pool.root.1
[2025-07-27 05:22:19]  *** Contents of shared directory: ***
[2025-07-27 05:22:19] total 404380
[2025-07-27 05:22:19] -rw-r--r-- 2 boincer umatlas 243794340 Jul 27 03:26 ATLAS.root_0
[2025-07-27 05:22:19] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 03:26 start_atlas.sh
[2025-07-27 05:22:19] -rw-r--r-- 2 boincer umatlas    542868 Jul 27 03:26 input.tar.gz
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas 168803010 Jul 27 05:21 HITS.pool.root.1
[2025-07-27 05:22:19] -rw------- 1 boincer umatlas    921600 Jul 27 05:22 result.tar.gz
05:22:20 (17053): run_atlas exited; CPU time 26788.596614
05:22:20 (17053): called boinc_finish(0)

</stderr_txt>
]]>

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