Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:15:43 (2788811): wrapper (7.7.26015): starting
05:15:43 (2788811): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 05:15:43] Arguments: --nthreads 12
[2025-07-27 05:15:43] Threads: 12
[2025-07-27 05:15:43] Checking for CVMFS
[2025-07-27 05:15:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 05:15:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 05:15:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 05:15:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 05:15:43] 2.13.0.0 2408171 18173 312260 148807 2 104 20516109 32935936 6979 16776704 0 37327598 99.690 57200709 29735 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 05:15:43] CVMFS is ok
[2025-07-27 05:15:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 05:15:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 05:15:43] Further information can be found at the LHC@home message board.
[2025-07-27 05:15:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 05:15:43] Checking for apptainer binary...
[2025-07-27 05:15:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 05:15:43] Running /usr/bin/apptainer --version
[2025-07-27 05:15:44] apptainer version 1.4.1-1.el9
[2025-07-27 05:15:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 05:15:44] c6-5-7-3.aglt2.org
[2025-07-27 05:15:44] apptainer works
[2025-07-27 05:15:44] Set ATHENA_PROC_NUMBER=12
[2025-07-27 05:15:44] Set ATHENA_CORE_NUMBER=12
[2025-07-27 05:15:44] Starting ATLAS job with PandaID=6745966023
[2025-07-27 05:15:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 06:30:32]  *** The last 200 lines of the pilot log: ***
[2025-07-27 06:30:32] 2025-07-27 10:29:51,692 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745966023/log.45758307._000106.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758307._000106.job
[2025-07-27 06:30:32] 2025-07-27 10:29:51,716 | INFO     | adding to output.list: log.45758307._000106.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/22/log.45758307._000106.job.log.tg
[2025-07-27 06:30:32] 2025-07-27 10:29:51,717 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 06:30:32] 2025-07-27 10:29:51,718 | INFO     | summary of transferred files:
[2025-07-27 06:30:32] 2025-07-27 10:29:51,718 | INFO     |  -- lfn=log.45758307._000106.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 06:30:32] 2025-07-27 10:29:51,718 | INFO     | stage-out finished correctly
[2025-07-27 06:30:32] 2025-07-27 10:29:53,269 | WARNING  | process 2799326 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 06:30:32] 2025-07-27 10:29:53,270 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745966023/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 06:30:32] 2025-07-27 10:29:53,271 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745966023/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 06:30:32] 2025-07-27 10:29:53,272 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3912475 B
[2025-07-27 06:30:32] 2025-07-27 10:29:53,273 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15295 B
[2025-07-27 06:30:32] 2025-07-27 10:29:53,273 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 06:30:32] 2025-07-27 10:29:53,292 | INFO     | sufficient remaining disk space (76282855424 B)
[2025-07-27 06:30:32] 2025-07-27 10:29:53,292 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 06:30:32] 2025-07-27 10:29:53,293 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6745966023: 4209000 B (within 2537553920 B limit)
[2025-07-27 06:30:32] 2025-07-27 10:29:53,293 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6745966023/HITS.45758307._000106.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 06:30:32] 2025-07-27 10:29:53,294 | INFO     | total size of present files: 0 B (workdir size: 4209000 B)
[2025-07-27 06:30:32] 2025-07-27 10:29:53,294 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6745966023/HITS.45758307._000106.pool.root.1 since it does not exist
[2025-07-27 06:30:32] 2025-07-27 10:29:53,589 | INFO     | number of running child processes to parent process 2799326: 1
[2025-07-27 06:30:32] 2025-07-27 10:29:53,590 | INFO     | maximum number of monitored processes: 6
[2025-07-27 06:30:32] 2025-07-27 10:29:54,251 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 06:30:32] 2025-07-27 10:29:54,337 | INFO     | job 6745966023 has state=finished
[2025-07-27 06:30:32] 2025-07-27 10:29:54,338 | INFO     | preparing for final server update for job 6745966023 in state='finished'
[2025-07-27 06:30:32] 2025-07-27 10:29:54,338 | INFO     | this job has now completed (state=finished)
[2025-07-27 06:30:32] 2025-07-27 10:29:54,338 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 06:30:32] 2025-07-27 10:29:54,338 | INFO     | log transfer has been attempted: DONE
[2025-07-27 06:30:32] 2025-07-27 10:29:54,339 | INFO     | job 6745966023 has finished - writing final server update
[2025-07-27 06:30:32] 2025-07-27 10:29:54,339 | INFO     | total number of processed events: 400 (read)
[2025-07-27 06:30:32] 2025-07-27 10:29:54,339 | INFO     | executing command: lscpu
[2025-07-27 06:30:32] 2025-07-27 10:29:54,402 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 06:30:32] 2025-07-27 10:29:56,093 | INFO     | monitor loop #327: job 0:6745966023 is in state 'finished'
[2025-07-27 06:30:32] 2025-07-27 10:29:56,094 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:30:32] 2025-07-27 10:29:58,596 | INFO     | monitor loop #328: job 0:6745966023 is in state 'finished'
[2025-07-27 06:30:32] 2025-07-27 10:29:58,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:30:32] 2025-07-27 10:29:59,413 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 06:30:32] 2025-07-27 10:29:59,422 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3072.1748928571437
[2025-07-27 06:30:32] 2025-07-27 10:29:59,431 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745966023/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 06:30:32] 2025-07-27 10:29:59,432 | INFO     | extracted standard info from prmon json
[2025-07-27 06:30:32] 2025-07-27 10:29:59,432 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 06:30:32] 2025-07-27 10:29:59,432 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 06:30:32] 2025-07-27 10:29:59,432 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 06:30:32] 2025-07-27 10:29:59,432 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 06:30:32] 2025-07-27 10:29:59,434 | INFO     | fitting pss+swap vs Time
[2025-07-27 06:30:32] 2025-07-27 10:29:59,434 | INFO     | sum of square deviations: 89127252.5
[2025-07-27 06:30:32] 2025-07-27 10:29:59,435 | INFO     | sum of deviations: -10330542851.5
[2025-07-27 06:30:32] 2025-07-27 10:29:59,435 | INFO     | mean x: 1753610074.5
[2025-07-27 06:30:32] 2025-07-27 10:29:59,435 | INFO     | mean y: 2655722.0757575757
[2025-07-27 06:30:32] 2025-07-27 10:29:59,435 | INFO     | -- intersect: 203259723692.88922
[2025-07-27 06:30:32] 2025-07-27 10:29:59,435 | INFO     | intersect: 203259723692.88922
[2025-07-27 06:30:32] 2025-07-27 10:29:59,435 | INFO     | chi2: 0.2165691265145461
[2025-07-27 06:30:32] 2025-07-27 10:29:59,435 | INFO     | -- intersect: 203259723692.88922
[2025-07-27 06:30:32] 2025-07-27 10:29:59,435 | INFO     | current memory leak: -115.91 B/s (using 66 data points, chi2=0.22)
[2025-07-27 06:30:32] 2025-07-27 10:29:59,436 | INFO     | could have reported an average CPU frequency of 3034 MHz (6 samples)
[2025-07-27 06:30:32] 2025-07-27 10:29:59,436 | INFO     | ..............................
[2025-07-27 06:30:32] 2025-07-27 10:29:59,436 | INFO     | . Timing measurements:
[2025-07-27 06:30:32] 2025-07-27 10:29:59,436 | INFO     | . get job = 0 s
[2025-07-27 06:30:32] 2025-07-27 10:29:59,436 | INFO     | . initial setup = 2 s
[2025-07-27 06:30:32] 2025-07-27 10:29:59,436 | INFO     | . payload setup = 8 s
[2025-07-27 06:30:32] 2025-07-27 10:29:59,436 | INFO     | . stage-in = 0 s
[2025-07-27 06:30:32] 2025-07-27 10:29:59,436 | INFO     | . payload execution = 4406 s
[2025-07-27 06:30:32] 2025-07-27 10:29:59,436 | INFO     | . stage-out = 0 s
[2025-07-27 06:30:32] 2025-07-27 10:29:59,436 | INFO     | . log creation = 0 s
[2025-07-27 06:30:32] 2025-07-27 10:29:59,437 | INFO     | ..............................
[2025-07-27 06:30:32] 2025-07-27 10:29:59,531 | INFO     | 
[2025-07-27 06:30:32] 2025-07-27 10:29:59,532 | INFO     | job summary report
[2025-07-27 06:30:32] 2025-07-27 10:29:59,532 | INFO     | --------------------------------------------------
[2025-07-27 06:30:32] 2025-07-27 10:29:59,532 | INFO     | PanDA job id: 6745966023
[2025-07-27 06:30:32] 2025-07-27 10:29:59,532 | INFO     | task id: 45758307
[2025-07-27 06:30:32] 2025-07-27 10:29:59,532 | INFO     | errors: (none)
[2025-07-27 06:30:32] 2025-07-27 10:29:59,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 06:30:32] 2025-07-27 10:29:59,532 | INFO     | pilot state: finished 
[2025-07-27 06:30:32] 2025-07-27 10:29:59,532 | INFO     | transexitcode: 0
[2025-07-27 06:30:32] 2025-07-27 10:29:59,532 | INFO     | exeerrorcode: 0
[2025-07-27 06:30:32] 2025-07-27 10:29:59,533 | INFO     | exeerrordiag: 
[2025-07-27 06:30:32] 2025-07-27 10:29:59,533 | INFO     | exitcode: 0
[2025-07-27 06:30:32] 2025-07-27 10:29:59,533 | INFO     | exitmsg: OK
[2025-07-27 06:30:32] 2025-07-27 10:29:59,533 | INFO     | cpuconsumptiontime: 46304 s
[2025-07-27 06:30:32] 2025-07-27 10:29:59,533 | INFO     | nevents: 400
[2025-07-27 06:30:32] 2025-07-27 10:29:59,533 | INFO     | neventsw: 0
[2025-07-27 06:30:32] 2025-07-27 10:29:59,533 | INFO     | pid: 2799326
[2025-07-27 06:30:32] 2025-07-27 10:29:59,533 | INFO     | pgrp: 2799326
[2025-07-27 06:30:32] 2025-07-27 10:29:59,533 | INFO     | corecount: 12
[2025-07-27 06:30:32] 2025-07-27 10:29:59,533 | INFO     | event service: False
[2025-07-27 06:30:32] 2025-07-27 10:29:59,533 | INFO     | sizes: {0: 2397456, 5: 2397718, 11: 2397774, 4418: 2423759, 4419: 2432757, 4422: 2432841, 4427: 2433163}
[2025-07-27 06:30:32] 2025-07-27 10:29:59,533 | INFO     | --------------------------------------------------
[2025-07-27 06:30:32] 2025-07-27 10:29:59,533 | INFO     | 
[2025-07-27 06:30:32] 2025-07-27 10:29:59,534 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 06:30:32] 2025-07-27 10:29:59,558 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,559 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,559 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,559 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,559 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,559 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,559 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,559 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,559 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,559 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,559 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,559 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,560 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 06:30:32] 2025-07-27 10:29:59,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,560 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 06:30:32] 2025-07-27 10:29:59,560 | INFO     | job 6745966023 has completed (purged errors)
[2025-07-27 06:30:32] 2025-07-27 10:29:59,560 | INFO     | overall cleanup function is called
[2025-07-27 06:30:32] 2025-07-27 10:30:00,082 | INFO     | PID=2792736 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 06:30:32] 2025-07-27 10:30:00,082 | INFO     | .. there are 11 such processes running
[2025-07-27 06:30:32] 2025-07-27 10:30:00,568 | INFO     | --- collectZombieJob: --- 10, [2799326]
[2025-07-27 06:30:32] 2025-07-27 10:30:00,568 | INFO     | zombie collector waiting for pid 2799326
[2025-07-27 06:30:32] 2025-07-27 10:30:00,569 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 06:30:32] 2025-07-27 10:30:00,569 | INFO     | collected zombie processes
[2025-07-27 06:30:32] 2025-07-27 10:30:00,569 | INFO     | will attempt to kill all subprocesses of pid=2799326
[2025-07-27 06:30:32] 2025-07-27 10:30:00,851 | INFO     | process IDs to be killed: [2799326] (in reverse order)
[2025-07-27 06:30:32] 2025-07-27 10:30:00,946 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 06:30:32] 2025-07-27 10:30:00,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 06:30:32] 2025-07-27 10:30:00,957 | INFO     | did not find any defunct processes belonging to 2799326
[2025-07-27 06:30:32] 2025-07-27 10:30:00,969 | INFO     | did not find any defunct processes belonging to 2799326
[2025-07-27 06:30:32] 2025-07-27 10:30:00,969 | INFO     | ready for new job
[2025-07-27 06:30:32] 2025-07-27 10:30:00,969 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 06:30:32] 2025-07-27 10:30:00,971 | INFO     | ***************************************
[2025-07-27 06:30:32] 2025-07-27 10:30:00,972 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 06:30:32] 2025-07-27 10:30:00,972 | INFO     | ***************************************
[2025-07-27 06:30:32] 2025-07-27 10:30:00,972 | INFO     | 
[2025-07-27 06:30:32] 2025-07-27 10:30:00,986 | INFO     | architecture information:
[2025-07-27 06:30:32] 2025-07-27 10:30:00,987 | INFO     | executing command: cat /etc/os-release
[2025-07-27 06:30:32] 2025-07-27 10:30:01,006 | INFO     | cat /etc/os-release:
[2025-07-27 06:30:32] NAME="CentOS Linux"
[2025-07-27 06:30:32] VERSION="7 (Core)"
[2025-07-27 06:30:32] ID="centos"
[2025-07-27 06:30:32] ID_LIKE="rhel fedora"
[2025-07-27 06:30:32] VERSION_ID="7"
[2025-07-27 06:30:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 06:30:32] ANSI_COLOR="0;31"
[2025-07-27 06:30:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 06:30:32] HOME_URL="https://www.centos.org/"
[2025-07-27 06:30:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 06:30:32] 
[2025-07-27 06:30:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 06:30:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 06:30:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 06:30:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 06:30:32] 
[2025-07-27 06:30:32] 2025-07-27 10:30:01,007 | INFO     | ***************************************
[2025-07-27 06:30:32] 2025-07-27 10:30:01,510 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 06:30:32] 2025-07-27 10:30:01,533 | INFO     | sufficient remaining disk space (76287049728 B)
[2025-07-27 06:30:32] 2025-07-27 10:30:01,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 06:30:32] 2025-07-27 10:30:01,534 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 06:30:32] 2025-07-27 10:30:01,534 | INFO     | update_server=False
[2025-07-27 06:30:32] 2025-07-27 10:30:01,534 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 06:30:32] 2025-07-27 10:30:01,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:30:32] 2025-07-27 10:30:01,633 | INFO     | all job control threads have been joined
[2025-07-27 06:30:32] 2025-07-27 10:30:01,633 | INFO     | all data control threads have been joined
[2025-07-27 06:30:32] 2025-07-27 10:30:02,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:30:32] 2025-07-27 10:30:02,105 | INFO     | aborting loop
[2025-07-27 06:30:32] 2025-07-27 10:30:02,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 06:30:32] 2025-07-27 10:30:02,539 | INFO     | [job] retrieve thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:02,540 | INFO     | [job] queue monitor thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:02,637 | INFO     | [job] control thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:02,638 | INFO     | [data] control thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:02,696 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:02,874 | INFO     | [data] copytool_in thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:02,938 | INFO     | all payload control threads have been joined
[2025-07-27 06:30:32] 2025-07-27 10:30:03,086 | INFO     | [payload] validate_post thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:03,109 | INFO     | [job] job monitor thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:03,428 | INFO     | [job] validate thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:03,811 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:03,862 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:03,906 | INFO     | [payload] failed_post thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:03,944 | INFO     | [payload] control thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:04,350 | INFO     | [data] copytool_out thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:04,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 06:30:32] 2025-07-27 10:30:08,854 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:11,786 | INFO     | job.realtimelogging is not enabled
[2025-07-27 06:30:32] 2025-07-27 10:30:12,791 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 06:30:32] 2025-07-27 10:30:13,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140140876883776)>', '<ExcThread(monitor, started 140139942635264)>']
[2025-07-27 06:30:32] 2025-07-27 10:30:18,421 | INFO     | all workflow threads have been joined
[2025-07-27 06:30:32] 2025-07-27 10:30:18,421 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 06:30:32] 2025-07-27 10:30:18,421 | INFO     | traces error code: 0
[2025-07-27 06:30:32] 2025-07-27 10:30:18,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 06:30:32] 2025-07-27 10:30:32,481 | INFO     | PID=2792736 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 06:30:32] 2025-07-27 10:30:32,482 | INFO     | .. there are 11 such processes running
[2025-07-27 06:30:32] 2025-07-27 10:30:32,483 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 06:30:32] 2025-07-27 10:30:32,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 06:30:32] 2025-07-27 10:30:32,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 06:30:32] 2025-07-27 10:30:32,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 06:30:32] 2025-07-27 10:30:32,484 | INFO     | [monitor] control thread has ended
[2025-07-27 06:30:32] 2025-07-27 10:30:32,713 [wrapper] ==== pilot stdout END ====
[2025-07-27 06:30:32] 2025-07-27 10:30:32,715 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 06:30:32] 2025-07-27 10:30:32,719 [wrapper] pilotpid: 2792736
[2025-07-27 06:30:32] 2025-07-27 10:30:32,724 [wrapper] Pilot exit status: 0
[2025-07-27 06:30:32] 2025-07-27 10:30:32,739 [wrapper] pandaids: 6745966023
[2025-07-27 06:30:32] 2025-07-27 10:30:32,822 [wrapper] cleanup supervisor_pilot 3003937 2792737
[2025-07-27 06:30:32] 2025-07-27 10:30:32,826 [wrapper] Test setup, not cleaning
[2025-07-27 06:30:32] 2025-07-27 10:30:32,830 [wrapper] apfmon messages muted
[2025-07-27 06:30:32] 2025-07-27 10:30:32,834 [wrapper] ==== wrapper stdout END ====
[2025-07-27 06:30:32] 2025-07-27 10:30:32,838 [wrapper] ==== wrapper stderr END ====
[2025-07-27 06:30:32]  *** Error codes and diagnostics ***
[2025-07-27 06:30:32]     "exeErrorCode": 0,
[2025-07-27 06:30:32]     "exeErrorDiag": "",
[2025-07-27 06:30:32]     "pilotErrorCode": 0,
[2025-07-27 06:30:32]     "pilotErrorDiag": "",
[2025-07-27 06:30:32]  *** Listing of results directory ***
[2025-07-27 06:30:32] total 406620
[2025-07-27 06:30:32] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 22:37 queuedata.json
[2025-07-27 06:30:32] -rwx------. 1 boincer umatlas     36292 Jul 26 22:38 runpilot2-wrapper.sh
[2025-07-27 06:30:32] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 22:38 pilot3.tar.gz
[2025-07-27 06:30:32] -rw-r--r--. 1 boincer umatlas       100 Jul 27 05:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 06:30:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 05:15 run_atlas
[2025-07-27 06:30:32] -rw-r--r--. 1 boincer umatlas       105 Jul 27 05:15 job.xml
[2025-07-27 06:30:32] -rw-r--r--. 2 boincer umatlas 241357925 Jul 27 05:15 EVNT.45758305._000005.pool.root.1
[2025-07-27 06:30:32] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 05:15 start_atlas.sh
[2025-07-27 06:30:32] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 05:15 shared
[2025-07-27 06:30:32] -rw-r--r--. 2 boincer umatlas    542863 Jul 27 05:15 input.tar.gz
[2025-07-27 06:30:32] -rw-r--r--. 1 boincer umatlas         0 Jul 27 05:15 boinc_lockfile
[2025-07-27 06:30:32] -rw-r--r--. 1 boincer umatlas      2547 Jul 27 05:15 pandaJob.out
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas    980125 Jul 27 05:15 agis_schedconf.cvmfs.json
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas   1593052 Jul 27 05:15 agis_ddmendpoints.agis.ALL.json
[2025-07-27 06:30:32] drwx------. 4 boincer umatlas      4096 Jul 27 05:15 pilot3
[2025-07-27 06:30:32] -rw-r--r--. 1 boincer umatlas       529 Jul 27 06:29 boinc_task_state.xml
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas 169549551 Jul 27 06:29 HITS.45758307._000106.pool.root.1
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas      1034 Jul 27 06:29 memory_monitor_summary.json
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas    354862 Jul 27 06:29 log.45758307._000106.job.log.tgz.1
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas      7812 Jul 27 06:29 heartbeat.json
[2025-07-27 06:30:32] -rw-r--r--. 1 boincer umatlas      6841 Jul 27 06:30 init_data.xml
[2025-07-27 06:30:32] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 06:30 boinc_mmap_file
[2025-07-27 06:30:32] -rw-r--r--. 1 boincer umatlas        27 Jul 27 06:30 wrapper_checkpoint.txt
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas        95 Jul 27 06:30 pilot_heartbeat.json
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas       823 Jul 27 06:30 pilotlog.txt
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas    443248 Jul 27 06:30 log.45758307._000106.job.log.1
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas       357 Jul 27 06:30 output.list
[2025-07-27 06:30:32] -rw-r--r--. 1 boincer umatlas       620 Jul 27 06:30 runtime_log
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas    819200 Jul 27 06:30 result.tar.gz
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas       654 Jul 27 06:30 tGgLDmjS6z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiyTLDmeiqwSm.diag
[2025-07-27 06:30:32] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 06:30 runtime_log.err
[2025-07-27 06:30:32] -rw-r--r--. 1 boincer umatlas     22739 Jul 27 06:30 stderr.txt
[2025-07-27 06:30:32] HITS file was successfully produced:
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas 169549551 Jul 27 06:29 shared/HITS.pool.root.1
[2025-07-27 06:30:32]  *** Contents of shared directory: ***
[2025-07-27 06:30:32] total 402632
[2025-07-27 06:30:32] -rw-r--r--. 2 boincer umatlas 241357925 Jul 27 05:15 ATLAS.root_0
[2025-07-27 06:30:32] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 05:15 start_atlas.sh
[2025-07-27 06:30:32] -rw-r--r--. 2 boincer umatlas    542863 Jul 27 05:15 input.tar.gz
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas 169549551 Jul 27 06:29 HITS.pool.root.1
[2025-07-27 06:30:32] -rw-------. 1 boincer umatlas    819200 Jul 27 06:30 result.tar.gz
06:30:34 (2788811): run_atlas exited; CPU time 46360.994223
06:30:34 (2788811): called boinc_finish(0)

</stderr_txt>
]]>

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